| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,389,434 | T→C | 15.4% | A107A (GCT→GCC) | yfbP → | TPR‑like repeats‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,389,434 | 0 | T | C | 15.4% | 163.2 / 2.3 | 75 | A107A (GCT→GCC) | yfbP | TPR‑like repeats‑containing protein |
| Reads supporting (aligned to +/- strand): ref base T (37/24); new base C (10/2); total (49/26) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.92e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCAGCATATGGTAACGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGTACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGATCAAGACTTTGCAGCAAATCTCTTCCGTGTTGCTCGGAAATGTCTTTCAACGGGAAGGCTTGATGACGCACTGCCACTGTTACAGCGAGCAACAGAACAATTGCCTGAAGTCAGCGAATATTGGTTAGCACTGGCAATCCAGTATCGCCGATGTAAAAAAACAGAAGCTGCAGCACAGGCTGCGCTTAATGCTTATCTTGGCAATTGGGCATTTGGTGTTCCTGACAATAAAGTCATTCATTTGCTGTCACAGGCCGCAGA > NC_000913/2389210‑2389661 | gcagcaTATGGTAACGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGTACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGACGATCAAGACTTTGCAGCAACTCTCTTCCGTGTTGCCCGGa > 1:509957/1‑229 (MQ=255)gcagcaTATGGTAACGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGTACCTGCCTTTTCCAGCATTAAGAAGGTCGCAGAATGGCTGGAAGTGAATGATGATTATCCCCATGAAAATGGCATCCGCTTCGCAGCTCAAGACTTTTCAGCAAATCCCTTCCGCGTTACCCGGa > 2:328929/1‑229 (MQ=255) gggattgttgaagggggagtgttttgtttTTGACTTGCCTTTTGGTCAAGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGTACCTGCCTTTGCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGATCAAGACTTTGCAGCAAATCTCTTCCGTGTTGCTCGGaaa < 2:324584/210‑1 (MQ=255) cGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGTACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGATCAAGACTTTGCAGCAAATCTCTTCCGTGTTGCTCGGAAATGGCTTTCAACg > 1:378473/1‑229 (MQ=255) cGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGTACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGATCAAGACTTTGCAGCAAATCTCTTCCGTGTTGCTCGGAAATGCCTTTCAACg > 1:626138/1‑229 (MQ=255) cGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGTACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGATCAAGACTTTGATGCAAATCTCTTCCGTGTTGCTCGGAAAAGACTTTCaagg > 2:348514/1‑227 (MQ=255) gagaCTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGTACCTGCCTTTTCCAGCATTAAGGAGTTCGAAGAATGGCTGGAAGTGAATGATGATGGTCCCCATGAAAATGGCATCAGCATCGAGGATCAAGACTTTGACGCAAATCTCTTCCCTGTTGGTCGTAAAAGTATTTCacacgg > 2:325658/1‑224 (MQ=255) ggacttgtttggTTTGTACTGGCCTTTGGGGCCGGAGCAAAAACTACCTATAGTGTGCGAAACCTACCATGACGAATGGCGAATCGTACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGATCAAGACTTTGCAGCAAATCTCTTCCGTGTTGCTCGGAAATGTCTTTCAACGGGa < 2:418180/219‑1 (MQ=255) gaCTGCTGCGGTTTGCACTCGCTTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGTACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATTATGATGATCCGCATGAAAATGGCATCAGCAGCGAAGATCAAGACTTTGCAGCAAATCCCTTCCGTGTTGCTCGGAAATGTCTTTCAACGGGa < 1:325658/228‑1 (MQ=255) aCTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGTACCTGCCTTTTCCAGCATTAAGAAGATCGAAGAATGGCTGGAAGGTAATGATGATGATCCCCATGAAAATGTCATCAGCATCGAAGATCAAGACTTTGCAGCAAAGCCTGTCCGTGTTGCCCTGAAATGCTTTTCAAAggagag > 1:724774/1‑225 (MQ=255) atgtgtatcagagacagggTCAGGAGCTAAAACTTCCTATAGTGTTCGAAACGTACCATGACGAATGGCGAATCGGACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGATCAAGACTTTGCAGCAAATCTCTTCCGTGTTGCTCGGAAATGTCTTTCAACGGGAAGGCTtgatg < 1:660172/211‑1 (MQ=255) gtgcgtgctgatgggTCAGGGGCATAAACTACCTTTAGTGTGGTAAACGTACCATGACGAAGGGTGAATCGTACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGATCAAGACTTTGCAGCAAATCTCTTCCGTGTTGCTCGGAAATGTCTTTCAACGGGAAGGCTTGATGACGCa < 2:303755/216‑1 (MQ=255) gCCTTTTGTGCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATTACGAATGGCGAATCGTACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGATCAAGACTTTGCAGCAAATCTCTTCCGTGTTGCTCGGAAATGTCTTTCAACGGGAAGGCTTGATGACGCACTGCCa < 1:280019/229‑1 (MQ=255) gCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGTACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGTTCTAGACTTTGCAGCAAATCTCTTCCGTGTTGCTCGGAAATGTCTTTCAACGGGAAGGCTTGATGACGCACTGCCa > 1:406111/1‑229 (MQ=255) ttGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGTACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGCAGTGAATGATGATGATCCCCATGACAACGGCATCAGCATCGAAGCTCAAGACTTTGCAGCAAATCTCTTCCGTGTTCCACGGAAATGGCTTTCAACGGGAAAGCTGGATCACGCCCTGCCACGGtt > 2:713260/1‑229 (MQ=255) cAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGTACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGCGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGATCAAGACTTTGCAGCACATCCTTTCCGGGTTGCTCGGAAAGGGCTTTCAACGGGAAGGGTGGATGACCCCCCGCCCCTGTAACAGc > 2:539288/1‑229 (MQ=255) cATAAGCTACGTGTTGTGTGCGAAACCTACCATGGCGAATGGCGAATCGTTACTGCCTTTTACAGCATTAAGAAGTTCGAAGAATGGCTTGAAGGTAATTATGATGATCCCCATGAACATGGCATCAGCATCGAAGAGCAAGACTTTGCAGCAAATCTCTTCCGTGTTGCTCGGAAATATCTTTCAACGGGAAGGCTTGATGACGCACTGCCACTGTTACAGCGAGCaa < 1:333424/229‑1 (MQ=255) tAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGTACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGATCAAGAATTTGCAGCAAATCTCTTCAGTGTTGCCCGGAAATGACATTAAACGGGAAGGCTTACTGACGCACTGccccggtgtcttatcaccatc > 2:660171/1‑210 (MQ=255) aCTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGTACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATTATGATCCCCATGAAAATGGCATCAGCATCGAAGATCAAGACTTTGCAGCAAATCTCTTCGGTGTTGCCCGGAAATGCCTTTCAACGGGAAGGCTTGTTGACCCCCTGCCACTGTTACCTCGAGCAACAGaa > 2:753845/1‑229 (MQ=255) aGTGTGCGAAACGTACCATGACGAATGGCGACTCGTACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGATGGAAGTGAATGATGATGATCACCATGAAAATGGCATCAGCATGGAAGATCAAGACTTTGCAGCAAATTTCTTCCTCGTTGCTCGGAAAAGGCTTTCAACGGGAAGGCTTAATACACCACTGCCACGGTAACAGCTGCCAACAAAAAAAtcacca > 2:30314/1‑224 (MQ=255) tgtgCGAAACGTACCATGACGAATGGCGAATCGTACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGATCAAGACTTTGCAGCAAATCTCTTCCGTGTTGCTCGGAAATGTCTTTCAACGGGAAGGCTTGATGACGCACTGCCACTGTTACAGCGAGCAACAGAACAATTGCCTGa > 1:238725/1‑229 (MQ=255) gtgCGAAACGTACCATGACGAATGGCGAATCGTACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGCATGGCTGGAAGTGAATGATGATGATCCCCATGAACATGGCATCAGCATCGAAGATCAAAACTTTTCAGCAAATCTCTTCAGTGCTGCCCGGCAATGTTTTTCAAAGGGAAGGCTTTATTCCCACCTTCCACTGTTAACCGGAGCAACAGAAAAATTGCCTGaa > 2:292565/1‑229 (MQ=255) gtgCGAAACGTACCATGACGAATGGCGAATCGTACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGATCAAGACTTTGCAGCAAATCTCTTCCGTGTTGCTCGGAAATGTCTTTCAACGGGAAGGCTTGATGACGCACTGCCACTGTTACAGCGAGCAACAGAACAATTGCCTGaa > 1:1620/1‑229 (MQ=255) gtgCGAAACGTACCATGACGAATGGCGAATCGTACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGATCAAGACTTTGCAGCAAATCTCTTCCGTGTTGCTCGGAAATGTCTTTCAACGGGAAGGCTTGATGACGCACTGCCACTGTTACAGCGAGCAACAGAACAATTGCCTGaa > 1:606226/1‑229 (MQ=255) gtgCGAAACGTACCATGACGAATGGCGAATCGTACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGATCAAGACTTTGCAGCAAATCTCTTCCGTGTTGCTCGGAAATGTCTTTCAACGGGAAGGCTTGATGACGCACTGCCACTGTTACAGCGAGCAACAGAACAATTGCCTGaa > 1:527360/1‑229 (MQ=255) gtgCGAAACGTACCATGACGAATGGCGAATCGTACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGATCAAGACTTTGCAGCAAATCTCTTCCGTGTTGCACGGAAATGCATTTAAACGGGAAGGCTTGATGACGCACTGCCCCTGCTACAGCGAGCAACAGAACAATTGcacgaa > 1:288065/1‑224 (MQ=255) gtgCGAAACGTACCATGACGAATGGCGAATCGTACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGATCAAGACTTTGCAGCAAATCCTTTCCGTGTTGCCCGGAAATGTCTTTCAACGGGAAGGCTTGATGACGCCCTGCCACTGTTACAGCGAGCAACAAACCAATTCCCTGaa > 2:110403/1‑229 (MQ=255) gtgCGAAACGTACCATGACGAATGGCGAATCGTACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGATCAAGACTTTGCAGCAAATCCCTTCCGAGTTGCTCGGAAATGCCTTTCAACGGGAAGGCTTGATGACGCACTGCCACTGTTACAGCGAGCAAAAAAACAAATGCCTGaa > 2:230476/1‑229 (MQ=255) gtgCGAAACGTACCATGACGAATGGAGAATCGTACCTGCCTTTTCCAGCATTAAGAAGTTCGACGGATGGCTGGAACTGAATGATGATGATCCCCATGAAAATGGCATAAGCATCGAAGATCAAAAATTTGCAGCAAATCTCTTCCGTGTTGCTCGGAAATGTCTTTCAACGGGAAGGCTTGCTGAAGCACTGCCACTGTTACAGCGAGCACCAGAACAATTGCCTGaa > 1:265875/1‑229 (MQ=255) tgCGAAACGTACCATGACGAATGGCGAATCGTACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGCTGATGATCCCCATGAAAATGGCATCAGCATCGAAGATCAAGACTTTGCAGCAAATCTCTTCCGTGTTGCCCGGAAATGTCTTTCAACGGGAAGGCTTGTTGACGCCTTGCCCCTGTTACAGCGACCAACGTACAAATTGCCTGagg > 2:39089/1‑227 (MQ=255) tgCGAAACGTACCATGACGAATGGCGAATCGTACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAATGGATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGATAAAGACTTTGCAGCAAATCTCTTCCGTGTTGCTCGGAAATGTCTTTCAACGGGAAGGCTTGTTGACGCACTGCCACGTTTAAAGCAAGCCACAAAACAAATGCCTGAAg > 2:311406/1‑229 (MQ=255) tcgaaactgtccATGACGAATGGCGGATCGTACCTTCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGATCAAGACTTTGCAGCAAATCTCTTCCGTGTTGCTCGGAAATGTCTTTCAACGGGAAGGCTTGATGACGCACTGCCACTGTTACAGCGAGCAACAGAACAATTGCCTGAAGt < 2:527360/219‑1 (MQ=255) gCGAAACGTACCATGACGAATGGCGAATCGTACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGATCAAGACTTTGCAGCAAATCTCTTCCGTGTTGCTCGGAAATGTCTTTCAACGGGAAGGCTTGATTACGCACTGCCACTTTTACAGCGAGCAACAGAACAATTCCCTGAAGt > 1:544179/1‑229 (MQ=255) gCGAAACGTACCATGACGAATGGCGAATCGTACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGATCAAGACTTTGCAGCAAATCTCTTCCGTGTTGCTCGGAAATGTCTTTCAACGGGAAGGCTTGATGACGCAATGCCCCTGTGACACGCACCAACAGTAAAATTTACTGAAgc > 2:343147/1‑228 (MQ=255) cGAAACGTACCATGACGAATGGCGAATCGTACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGATCAAGACTTTGCAGCAAATCTCTTCCGTGTTGCTCGGAAATGTCTTTCAACGGGAAGGCTTGATGACGCACTGCCACTGTTACAGCGGGCCACAGAACAATTGACTGAAgca > 1:363927/1‑227 (MQ=255) cGAAACGTACCATGACGAATGGCGAATCGTACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGATCAAGACTTTGCAGCAAATCTCTTCCGTGTTGCTCGGAAATGTCTTTCAACGGGAAGGCTTGATGACGCACTGCCACTGTTACAGCGAGCAACAGAACAATTGCCTGAAGTc > 1:561037/1‑229 (MQ=255) gaaactgtgcATGACGAATGGCGAATCGTACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGATCAAGACTTTGCAGCAAATCTCTTCCGTGTTGCTCGGAAATGTCTTTCAACGGGAAGGCTTGATGACGCACTGCCACTGTTACAGCGAGCAACAGAACAATTGCCTGAAGTCa < 1:713261/220‑1 (MQ=255) gaaactgaacATGCCGAATGGCGAATCGTACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGATCAAGACTTTGCAGCAAATCTCTTCCGTGTTGCTCGGAAATGTCTTTCAACGGGAAGGCTTGATGACGCACTGCCACTGTTACAGCGAGCAACAGAACAATTGCCTGAAGTCa < 2:559446/220‑1 (MQ=255) gAAACGTACCATGACGAATTGCGAATCGTACCTGCCTTTTCCAGCAGTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAAGGGCATCAGCATCGAAGATCAAGACTTTGCAGCAAATCTCTTCCGTGTTGCTCGGAAATGTCTTTCAACGGGAAGGCTTGATGACGCACTGCCACTGTTACAGCGAGCAACAGAACAATTGCCTGAAGTCa < 2:527503/229‑1 (MQ=255) gAAACGTAACATGACGAATGGCGAATCGTACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGATCAAGACTTTGCAGCAAATCTCTTCCGTGTTGCTCGGAAATGTCTTTCAACGGGAAGGCTTGATGACGCACTGCCACTGTTACAGCGAGCAACAGAACAATTGCCTGAAGTCa < 1:96564/229‑1 (MQ=255) aaCGTACCATGACGAATGGCGAATGGGACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAAGGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGATCAAGACTTTGCAGCAAATCTCTTCCGTGTTGCTCGGAAATGTCTTTCAACGGGAAGGCTTGATGACGCACTGCCACTGTTACAGCGAGCAACAGAACAATTGCCTGAAGTCAGc < 1:46663/229‑1 (MQ=255) aaCGTACCATGACGAATGGCGAATCGTACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGGTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGATCAAGACTTTGCAGCAAATCTCTTCCGTGTTGCTCGGAAATGTCTTTCAACGGGAAGGCTTGATGACGCACTGCCACTGTTACAGCGAGCAACAGAACAATTGCCTGAAGTCAGc < 2:1620/229‑1 (MQ=255) aaCGTACCATGACGAATGGCGAATCGTACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGATCAAGACTTTGCAGCAAATCTCTTCCGTGTTGCTCGGAAATGTCTTTCAACGGGAAGGCTTGATGACGCACTGCCACTGTTACAGCGAGCAACAGAACAATTGCCTGAAGTCa > 1:559447/1‑227 (MQ=255) aaCGTACCATGACGAATGGCGAATCGTACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGATCAAGACTTTGCAGCAAATCTCTTCCGTGTTGCTCGGAAAGGTCTTTCAACGGGAAGGCTTGATGACGCACTGCCACTGTTACAGCGAGCAACAGACAAATTGCCTGAAGTCAGc > 2:484289/1‑229 (MQ=255) aaCGTACCATGACGAATGGCGAATCGTACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCAACAGCATCGAAGATCAAGACTTTGCAGCAAATCTCTTCCGTGTTGCCCGGAAATGCCTTTCAACGGGAAGGCTTGATTACGCACTGCCACTGTTACAGGGAGCAACAGAAAAAATGCCTAAAGTccgg > 2:157997/1‑226 (MQ=255) aCCATGACGAATGGCGAATCGTACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGATCAAGACTTTGCAGCAAATCTCTTCCGTGTTGCTCGGAAATGTCTTTCAACGGGAAGGCTTGATGACGCACTGCCCCTGTTACACCGAGCACCAAAAAAATTGCCGGAAGTAAggcaaaa > 2:139824/1‑223 (MQ=255) aCCATGACGAATGGCGAATCGTACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGATCAAGACTTTGCAGCAAATCTCTTCCGTGTTGCTCGGAAATGTCTTTCAACGGGAAGGCTTGATGACGCACTCCAACTGTTCCAGCGAGCACAAAAAAAATTGCCTGAAGCCAGCGaca > 2:134299/1‑226 (MQ=255) gACGAATGGCGAATCGTACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGGGAATGATGATGATCACCATGAAAATGGCATCAGCATCGAAGATCAAGACTTTGCAGCAAATCCCTTCCGTGTTGCTCGGAAATGTCTTTACACGGGAAGGCTTGATGACGCACGGCCACTGTTACAGCGAGCAACAGAACAATTGCCTGAAGTAAGCgcgaattgcg > 1:62895/1‑220 (MQ=255) aTGGCGAATCGTACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGATCAAGACTTTGCAGCAAATCTCTTCCGTGTTGCTCGGAAATGTCTTTCAACGGGAAGGCTTGATGACGCACTGCCACTGTTACAGCGAGCAACAGAACAATTGCCTGAAGCCAGCGAATATTGGTTTGCa > 1:594840/1‑229 (MQ=255) ccTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGTTGGAGGTGAATGATGCTAATCCCAACAAAAATGGCATCAGCATCGAAGAGCAAGACTTTGAAGCAAATCTCTACCGGTTTGCTCGGAAATGTCTTTCAACGTGAAGCCTTGTTTACGACCTGCCACTGTTACATCGAGTCACAGAACAACTGCCTGAAGTCCGCGAAAATCGTTTacaccagccaaacaata > 2:327180/1‑213 (MQ=255) ttAAGAAGTTAGAAGAAGGGCTGGAATTGAATGATGATGATCCCCATGAAAATGGCATCAGCATGGAAGATCAAGACTTTGCAGCAAATCTCTTCCGTGTTGCTCGGAAATGTCTTTCAACGGGAAGGCTTGATGACGCACTGCCACTGTTACAGCGAGCAACAGAACAATTGCCTGAAGTCAGCGAATATTGGTTAGCACTGGCAATCCAGTATCGCCGATGTaaaaa < 1:328929/229‑1 (MQ=255) ttCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGATCAAGACTTTGCAGCAAATCTCTTCCGTGTTGCCCGGAAATGTCTTTCAACGGGAAGGCTTGCTGACGCACTGCCCCTGTTACAGCGAGCAACAGAACAATTGCCTGCAGTCAGCGAAAATTGGTTAGCACTGCCAATCCAGTAACCCCGCAGTAAAAAAAAAGaaa > 2:195255/1‑228 (MQ=255) cGAAGAATGGCTGGAAGTGAATGATGATGATCCTCATGAAAATGGCATCAGCATCGAAGATCAAGACTTTGCAGCAAATCTCTTCCGTGTTGCTCGGAAATGTCTTTCAACGGGAAGGCTTGATGACGCACTGCCACTGTTACAGCGAGCAACAGAACAATTGCCTGAAGTCAGCGAATATTGGTTAGCACTGGCAATCCAGTATCGCCGATGTAAAAAAACAGAAGCt < 1:157997/229‑1 (MQ=255) attggttgAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGATCAAGACTTTGCAGCAAATCTCTTCCGTGTTGCTCGGAAATGTCTTTCAACGGGAAGGCTTGATGACGCACTGCCACTGTTACAGCGAGCAACAGAACAATTGCCTGAAGTCAGCGAATATTGGTTAGCACTGGCAATCCAGTATCGCCGATGTAAAAAAACAGAAGCTgcagca < 2:378473/222‑1 (MQ=255) agggCTGGAAGTGAATGAGGATGCGCCACAGTAAAAGGGCCTCAGGATGGAAGATCAAGACTTTGCAGCAAAGCTCTTCCGGGTTGCTCGGAAATGTCTTTCAACGGGAAGGTGTGATGAAGCACTGCCACTGTTACAGCGAGCAACAGAACAATTGCCGGAAGTCAGCGAATATTGGTTAGCACTGGCAATCCAGTATCGCCGATGTAAAAAAACAGAAGCTgcagca < 2:129415/227‑1 (MQ=255) tGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGATCAAGCCTTTGCAGCAAATCACTACCGTGTTGCTCGGAAATGTCTTTCAACGGGAAGGCTTGATGACGCACTGCCACTGTTACAGCGAGCAACAGAACAATTGCCTGAAGTCAGCGAATATTGGTTAGCACTGGCAATCCAGTATCGCCGATGTAAAAAAACAGAAGCTGCAGCACAgg < 1:715439/228‑1 (MQ=255) aGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGATCAAGACTTTGCAGCACATCTCTTCCGTGTTGCTCGGAAATGTCTTTTAAAGGGACGGCTTGATGAGCCACTGCCACTGTTACAGCGATCAACATACAAATTGCCTGAAGTCAGCGAATATAGATTAGCACTGTCAATCACGTATCCCCCATGTAAAAAAACAGaccgtgaaacacagacgacc > 2:229828/1‑210 (MQ=255) aGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGATCAAGACTTTGCAGCAAATCTCTTCCGTGTTGCTCGGAAATGTCTTTCAACGGGAAGGCTTGATGACGCACTGCCACTGTTACAGCGAGCAACAGAACAATTGCCTGAAGTCAGCGAATATTGGTTAGCCCTGGCAATCCAGTATCGCCGATGTAAAAAAAAAGAAGGTGCGGCAAAgggcggg > 2:263572/1‑224 (MQ=255) aGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGATCAAGACTTTGCAGCAAATCTCTTCCGTGTTGCTCGGAAATGTCTTTCAACGGGAAGGCTTGATGACGCACTGCCACTGTTACAGCGAGCAACAGAACAATTGCCTGAAGTCAGCGAATATTGGTTAGCACTGGCAATCCAGTATCACCGATGTAAAAAAACAGAAGATGCAGCACAGGCTgcg > 1:607850/1‑229 (MQ=255) tGAATGATGATGACCCCCAGGAAAATGGCATCAGCATCGAAGATCAAGACTTTGCAGCAAATCTCTTCCGTGTTGCTCGGAAATGTCTTTCAACGGGAAGGCTTGATGACGCACTGCCACTGTTACAGCGAGCAACAGAACAATTGCCTGAAGTCAGCGAATATTGGTTAGCACTGGCAATCCAGTATCGCCGATGTAAAAAAACAGAAGCTGCAGCACAGGCTGCGCt < 1:39089/229‑1 (MQ=255) tGAATGATGAAGATCCCCATGAAAATGGCATCAGCAGCGAAGATCAAGGCTTTGCAGCAAATCTCTTCCGTGTTGCCCGGAAATGTCTTTCAACGGGAAGGCTTGATGACGCACTGCCACTGTTACAGCGAGCAACAGAACAATTGCCTGAAGTCAGCGAATATTGGTTAGCACTGGCAATCCAGTATCGCCGATGTAAAAAAACAGAAGCTGCAGCACAGGCTGCGCt < 1:134299/229‑1 (MQ=255) aaTGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGATCAAGACTTTGCAGCAAATCTCTTCCGTGTTGCTCGGAAATGTCTTTCAACGGGAAGGATTGATGACGCACTGCCACTGTTACAGCGAGCAACAGAACAATTGCCTGAAGTCAGCGCATCTTGGTTAGCACTGCCAATCCAGAATGGCCGAGGAAAGAAACAAGAAGCTGCAGCACAGGCTGGGCTTa > 1:349128/1‑229 (MQ=255) cATGAAAATGGCATCAGCATCGAAGATCAAGACTTTGCAGCAAATCTCTTCCGTGTTGCTCGGAAATGTCTTTCAACGGGAAGGCTTGATGACGCACTGCCACTGTTACAGCGAGCAACAGAACACTTGCCTGAAGTCAGCGAATATTGGTTAGCACTGGCAATCCAGTATCGCCGATGTAAAAACACAGAAGCTGCAGCAAAGGCTGCCCTTAATGCTTATCTTGACa > 2:441198/1‑229 (MQ=255) tGGCATCAGCATCGAAGATCAAGACTTTGCAGCAAATCTCTTCCGTGTTGCTCGGAAATGTCTTTCAACGGGAAGGCTTGATGACGCACTGCCACTGTTACAGCGAGCAACAGAACAATTGCCTGAAGTCAGCGAATATTGGTTAGCACTGGCAATCCAGTATCGCCTATGTAAAAAAACCGAAGCTGCAGCACAGGCTGCGCTTAATCCTTATTTTGGCAATTGGGc > 1:363385/1‑228 (MQ=255) cATCAGCATCGAAGATCAAGACTTTGCAGCAAATCTCTTCCGTGTTGCTCGGAAATGTCTTTCAACGGGAAGGCTTGATGACGCACTGCCACTGTTACAGCGAGCAACAGAACAATTGCCTGAAGTCAGCGAATATTGGTTAGCACTGGCAATCCAGTATCGCCGATGTAAAAAAACAGAAGCTGCAGCACAGGCTGAGCTTAATGCTTATCTTGGCAATTGGGCAttt > 1:557856/1‑229 (MQ=255) aTCAGCATCGAAGATCAAGACTTTGCAGCAAATCTCTTCCGTGTTGCCCGGAAATGTCTTTCAACGGGAAGGCTTGATGACGCACTGCCACTGTTACAGCGAGCAACAGAACAATTGCCTGAAGTCAGCGAATATTGGTTAGCACTGGCAATCCAGTATCGCCGATGTAAAAAAACAGAAGCTGCAGCACAGGCTGCGCTTAATGCTTATCTTGGCAATTGGGCATTTg < 1:186293/229‑1 (MQ=255) gAAGATCAAGACTTTGCAGAAAATCTCTTCCGTGGTGCTCGGAAATGTCTTTCAACGGGAAGGCTTGATGACGCACTGCCACTGTTACAGCGAGCAACAGAACAATTGCCTGAAGTCAGCGAATATTGGTTAGCACTGGCAATCCAGTATCGCCGATGTAAAAAAACAGAAGCTGCAGCACAGGCTGCGCTTAATGCTTATCTTGGCAATTGGGCATTTGGTGTTCCt < 1:292565/228‑1 (MQ=255) aaGTCTTTGCAGCAAATCTCTTCCGTGTTGCTCGGAAATGTCTTTCAACGGGAAGGCTTGATGACGCACTGCCACTGTTACAGCGAGCAACAGAACAATTGCCTGAAGTCAGCGAATATTGGTTAGCACTGGCAATCCAGTATCGCCGATGTAAAAAAACAGAAGCTGCAGCACAGGCTGCGCTTAATGCTTATCTTGGCAATTGGGCATTTGGTGTTCCTGACAATa < 1:230476/228‑1 (MQ=255) aaGACTTTGCAGCAAATCTCTTCCGTGTTGCTCGGAAATGTCTTTCAACGGGAAGGCTTGATGACGCACTGCCACTGTTACAGCGAGCAACAGAACAATTGCCTGAAGTCAGCGAATATTGGTTAGCACTGGCAATCCAGTATCGCCGATGTAAAAAAACAGAAGCTGCAGCACAGGCTGCGCTTAATGCTTATCTTGGCAATTGGGCATTTGGTGTTCCTGACAATa < 1:205699/228‑1 (MQ=255) tGCAGCAAATCTCTTCCGTGTTGCTCGGAAATGTCTTTCAACGGGAAGGCTTGATGACGCACTGCCACTGTTACAGCGAGCAACAGAACAATTGCCTGAAGTCAGCGAATATTgg < 1:24262/115‑1 (MQ=255) tGCAGCAAATCTCTTCCGTGTTGCTCGGAAATGTCTTTCAACGGGAAGGCTTGATGACGCACTGCCACTGTTACAGCGAGCAACAGAACAATTGCCTGAAGTCAGCGAATATTgg > 2:24262/1‑115 (MQ=255) tGCAGCAAATCTCTTCCGTGTTGCTCGGAAATGTCTTTCAACGGGAAGGCTTGATGACGCACTGCCACTGTTACAGCGAGCAACAGAACAATTGCCTGAAGTCAGCGAATATTGGTTAGCACTGGCAATCCAGTATCGCCGATGTAAAAAAACAGAAGCTGCAGCACAGGCTGCGCTTAATGCTTATCTTGGCACTTGGGCATTTGGTGTTCCTGACAATAAAg > 1:186563/1‑224 (MQ=255) caAATCTCTTCCGTGTTGCTCGGAAATGTCTTTCAACGGGAAGGCTTGATGACGCACTGCCACTGTTACAGCGAGCAACAGAACAATTGACTGAAGTCAGCGAATATTGGTTAGCACTGGCAATCCAGTATCGCCGAGGTAAAAAAACAGAAGCTGCAGCACAGGCTGGGCTTAATGCTTATCTTGGCAATTGGGCATTTGGGGTTCCTGACAATAAAGTCATTCAttt > 1:466950/1‑229 (MQ=255) cTCGGAAATGTCTTTCAACGGGAAGGCTTGATGACGCACTGCCACTGTTACAGCGAGCAACAGAACAATTGCCTGAAGTCAGCGAATATTGGTTAGCACTGGCAATCCAGTATCGCCGATGTAAAAAAACAGAAGCTGCAGCACAGGCTGCGCTTAATGCTTATCTTGGCAATTGGGCATTTGGTGTTCCTGACAATAAAGTCATTCATTTGCTGTCACAGACCGCAGa > 1:191930/1‑229 (MQ=255) cTCGGAAATGTCCTTCAACGGGAAGGCTTGATGACGCACTGCCACTGTTACAGCGAGCAACAGAACAATTGCCTGAAGTCAGCGAATATTGGTTACCACTGGCAATCCAGTATCGCCCATGTAAAAAAACAGAAGCTGCAGCACAGGCTCCGCTTAATGCTTATTTTGGCAATTGGGCATTTGGTGTTCCTAACAATAAAATCACTCATTTGCCGTCACAGGCCCCAg > 2:4980/1‑228 (MQ=255) | GCAGCATATGGTAACGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGTACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGATCAAGACTTTGCAGCAAATCTCTTCCGTGTTGCTCGGAAATGTCTTTCAACGGGAAGGCTTGATGACGCACTGCCACTGTTACAGCGAGCAACAGAACAATTGCCTGAAGTCAGCGAATATTGGTTAGCACTGGCAATCCAGTATCGCCGATGTAAAAAAACAGAAGCTGCAGCACAGGCTGCGCTTAATGCTTATCTTGGCAATTGGGCATTTGGTGTTCCTGACAATAAAGTCATTCATTTGCTGTCACAGGCCGCAGA > NC_000913/2389210‑2389661 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |