| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,541,881 | A→C | 19.1% | G210G (GGT→GGG) | cysU ← | sulfate/thiosulfate ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,541,881 | 0 | A | C | 19.1% | 105.1 / 2.8 | 55 | G210G (GGT→GGG) | cysU | sulfate/thiosulfate ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base A (21/21); new base C (5/8); total (26/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.37e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TTCAATTGGGTAACTTCCGCCATTAATGACCTACCACACGCCGACCAAAGCGACTTTGCAGAGTGTTAATTGAGAACAGCAGC‑AGC‑AGAGATGCCGCGAGGATCACCGAAGCAATCGCGCTCGCTGCCGGGTAATCAAACTCCTGTAAGCGCACAAAAATCATCAGCGACGTCACTTCCGTCTTCCACGCGATATTTCCGGCGATAAAAATCACCGCGCCAAATTCACCAAG‑ACTACGGGTAAACGACAGCGCCACGCCCGCCACCAGCGCCGGAGAAAGCTCCGGCAGCACCACTTTGCAGAAACTCTGCCAGCGCGTTGCACCAAGCGTTTCCGCCGCTTCTTCATATTCCGGGCCTAACTCTTCCAGCACCGGCTGCACGGTACGCACCACAAACGGAATGCTGGTAAAGGCCATAGCCACCGCAATCCCCAGCC > NC_000913/2541655‑2542092 | ttCAATTGGGTAACTTCCGCCATTAATGACCTACCACACGCCGACCAAAGCGACTTTGCAGAGTGTTAATTGAGAACAGCAGC‑AGC‑AGAGATGCCGCGAGGATCACCGAAGCAATCGCGCTCGCTGCCGGGTAATCAAACTCCTGTAAGCGCACAAAAATCCTCAGCGACGTCACTTCCGTCTTCCACGCGATATTTCCGGCGCTAAAAATAACCGCGCCAAATGCAcc > 1:750594/1‑229 (MQ=255) tCAATTGGGTAACTTCCGGCATTAATGACCTAACACACGCCGACCAAAGCGACTTTGCAGAGTGTTAATTGAGAACAGCAGC‑AGC‑AGAGATGCCGCGAGGATCACCGAAGCAATCGCGCTCGCTGCCGGGTAATCAAACTCCTGTAAGCGCACAAAAATCATCAGCGACGTCACTTCCGTCTTCCACGCGATATTTCCGGCGATAAAAATCACCGCGCCAAATTCAcc < 1:362779/228‑1 (MQ=255) tGGTTATCTTCCGCCATTAATGCCCTCCCACCCGCCGACAAAAGCTACTTTGCAGAGTGTTAATTGAGAACAGCAGC‑GGC‑AGAGATGCCGCGAGGATCACCGAAGCAATCGCGCTCGCTGCCGGGTAATCAAACTCCTGTAAGCGCACAAAAATCATCAGCGACGTCACTTCCGTCTTCCACGCGATATTTCCGGCGATAAAAATCACCGCGCCAAATTCACCAAG‑GCt < 2:687281/229‑1 (MQ=255) tGGGTAACTTCCGCCATTAAGGACCTACCACACGCCGACCAAAGCGACTTTGCAGAGTGTTAATTGAGAACAGCAGC‑AGC‑AGAGACGCCGCGAGGATAACCGAAGCAATCGCGCTCGCTGCCGGGTAATCAAACTCCTGTAAGCGCACAAAAATCATCAGCGACGTCACTTCCGTCTTCCACGCGATATTTCCGGCGATAAAAATCACCGCGCCAAATTCACCAAG‑ACt < 1:293221/229‑1 (MQ=255) ggTACCTCCCGGCATTAATGACCTCCCACACGCCGACCAAAGCGACTTTGCAGAGTGTTAATTGAGAACAGCAGC‑AGC‑AGAGATGCCGCGAGGATCACCGAAGCAATCGCGCTCGCTGCCGGGTAATCAAACTCCTGTAAGCGCACAAAAATCATCAGCGACGTCACTTCCGTCTTCCACGCGATATTTCCGGCGATAAAAATCACCGCGCCAAATTCACCAAG‑ACTAc < 1:61272/229‑1 (MQ=255) ggTAATTGCCGCAATTAATGACCGACCACACGACGACCAAAGCGACTTTGGAGAGTGTTAATTGAGAACAGCAGC‑AGC‑AGGGATGCCGCGAGGATCACCGAAGCAATCGCGCTCGCTGCCGGGTAATCAAACTCCTGTAAGCGCACAAAAATCATCAGCGACGTCACTTCCGTCTTCCACGCGATATTTCCGGCGATAAAAATCACCGCGCCAAATTCACCAAG‑ACTAc < 1:673010/229‑1 (MQ=255) ccATTAATGACCTACCACACGCCGACCAAAGCGACTTTGCAGAGTGTTAATTGAGAACAGCAGC‑AGC‑AGAGATGCCGCGAGGATCACCGAAGCAATCGCGCTCGCTGCCGGGTAATCAAACTCCTGTAAGCGCACAAAAATCATCAGCGACGTCACTTCCGTCTTCCACGCGATATTTCCGGCGATAAAAATCACCGCGCCAAATTCACCAAG‑ACTACGGGTAAACGa > 1:686907/1‑228 (MQ=255) cTACCACACGCCGACCAAAGCGACTTTGCAGAGTGTTAATTGAGAACAGCAGC‑AGC‑AGAGATGCCGCGAGGATCACCGAAGCAATCGCGCTCGCTGCCGGGTAATCAAACTCCGGTAAGCGCACAAAAATCATCAGCGACGTCACTTCCGCCTTCCACGCGCTATTTCCGGGGAAAAAAATCACCGCGGCAAATTCACCCAG‑CCCACGGGTAAAAGACAGCACCAcacc > 2:692913/1‑229 (MQ=255) aCCACACGCCGACCAAAGCGACTTTGCAGAGTGTTAATTGAGAACAGCAGC‑AGC‑AGAGATGCCGCGAGGATCACCGAAGCAATCGCGCTCGCTGCCGGGTAATCCAACTCCTGTAAGCGCAC‑AAAATCATCAGCGACGTCACTTCCGTCTTCCACGCGATATTTCCGGCGATAAAAATCACCGCGCCAAATTCACCAAG‑ACTACGGGTAAACGACAGCGCCAcgcccgc > 2:7383/1‑229 (MQ=255) aCCACACGCCGACCAAAGCGACTTTGCAGAGTGTTAATTGAGAACAGCAGC‑AGC‑AGAGATGCCGCGAGGATCACCGAAGCAATCGCGCTCGCTGCCGGGTAATCAAACTCCTGTAAGCGCACAAAAATCATCAGCGACGTCACTTCCGTCTTCCACGCGCTATTTCCGGCGATAAAAATCACCGCGCCAAATTCACCAAG‑ACTACGGGTAAACGACAGCGCCAcgccc > 1:200451/1‑228 (MQ=255) aCCACACGCCGACCAAAGCGACTTTGCAGAGTGTTAATTGAGAACAGCAGC‑AGC‑AGAGATGCCGCGAGGATCACCGAAGCAATCGCGCTCGCTGCCGGGTAATCAAACTCCTGTAAGCGCACAAAAATCATCAGCGACGTCACTTCCGTCTTCCACGCGATATTTCCGGCGATAAAAATCACCGCGCCAAATTCCCCAAG‑ACTACGGGAAAACGCAAGCGACAcccccg > 2:178046/1‑229 (MQ=255) gCCGACCAAAGCGACTTTGCAGACTGTTAATTGAGAACAGCAGC‑AGC‑AGAGATGCCGCGAGGATCACCGAAGCAATCGCGCTCGCTGCCGGGTAATCAAACTCCTGTAAGCGCACAAAAATCATCAGCGACGTCACTTCCGTCTTCCACGCGATATTTCCGGCGATAAAAATCACCGCGCCAAATTCCCCAAG‑ACTACGGGTAAACGCCAGCGCCACGCCCCccacaac > 1:173018/1‑226 (MQ=255) ccGACCAAAGCGACTTTGCAGAGTGTTAATTGAGAACAGCAGC‑AGC‑AGAGATGCCGCGAGGATCACCGAAGCAATCGCGCTCGCTGCCGGGTAATCAAACTCCTGTAAGCGCACAAAAATCATCAGCGACGTCACTTCCGTCTTCCACGCGATATTTCCGGCGATAAAAATCACCGCGCCAAATTCACCAAG‑ACTACGGGTAAACGACAGCGCCACGCCCGCCACCAg > 1:257369/1‑228 (MQ=255) aCCAAAGCGACTTTGCAGAGTGTTAATTGAGAACAGCAGC‑AGC‑AGAGATGCCGCGAGGATCACCGAAGCAATCGCGCTCGCTGCCGGGTAATCAAACTCCTGTAAGCGCACAAAAATCATCAGCGACGTCACTTCCGTCTTCCACGCGATATTTCCGGCGATAAAAATCACCGCGCCAAATTCCCCAAG‑ACTACGGGTAAACGACACAGCAACCCCCCccaccccccc > 2:605874/1‑223 (MQ=255) ttacAGAGGGTTAATTGAGAACAGCAGC‑AGC‑AGAGATGCCGCGAGGATCACCGAAGCAATGGCGCTCGCGGCCGGGTAATCAAACTCCTGTAAGCGCACAAAAATCATCAGCGACGTCACTTCCGTCTTCCACGCGATATTTCCGGCGATAAAAATCACCGCGCCAAATTCACCAAG‑ACTACGGGTAAACGACAGCGCCACGCCCGCCACCAGCGCCGGAGAAAGCTcc < 1:182145/226‑1 (MQ=255) gCAGATTGTTAATTGAGAAC‑G‑AGCGAGCGAGGAATGGCGGTAGGATCACCGAACCACGCGCGCTCGCCGCCGGGTAATCCACCTCCGTAAAGCGCACAAAAATCAGAAGCGCCGTCCCTTCCGTCTTCCACGCGATATGTCCGGCGATAAAAATCACCGCGCCAAATTCACCAAG‑ACTACGGGTAAACGACAGCGCCACGCCCGCCACCAGCGCCGGAGAAAGCTCCgg < 2:272349/229‑1 (MQ=255) aggttttAATTGGAAACAGCAGC‑AGC‑AGAGATGCCCAGAGGTCCCCCGAAGAAATCGCGCTCGGTGCCGGGTAATCAAACTCCAGTAAGCGCACAAAAATCATCAGCGACGTCACTTCCGCTTTCCACGCGATATTTCCGGCGATAAAAATCACCGCGCCAAATTCACCAAG‑ACTACGGGTAAACGACAGCGCCACGCCCGCCACCAGCGCCGGAGAAAGCTCCgg < 2:340698/221‑1 (MQ=255) tgtTAATTGAGAACAGCAGC‑AGC‑AGAGATGCCGCGAGGATCACCGAAGCAATCGCGCTCGCTGCCGGGTAATCAAACTCCTGTAAGCGCACAAAAATCATCAGCGACGTCACTTCCGTCTTCCACGCGATATTTCCGGCGATCAAAATCACCGCGCCAAATTCCCCAAG‑ACTACGGGTAAACACAAACCCCACGCCCCCCCCCACCCCCGGAAAAAGCCCCGCCAacac > 2:355203/1‑229 (MQ=255) tgtTAATTGAGAACAGCAGC‑AGC‑AGAGATGCCGCGAGGATCACCGAAGCAATCGCGCTCGCTGCCGGGTAATCAAACTCCTGTAAGCGCACAAAAATCATCAGCGACGTCACTTCCGTCTTCCACGCGATATTTCCGGCGATAAAAATCACCGCGCCAAATTCACCACG‑ACTACGGGGACACGAAAGCGCCACGCCCGCCACCACCGCCGGCGAAAGCTCCgcaacaac > 1:308886/1‑222 (MQ=255) tgtTAATTGAGAACAGCAGC‑AGC‑AGAAAAGCCGCAAGGATCACCGAAGCAATCGCGCTCGCTGCCGGTTAATCAAACTCCTGTAAGCGCACAAAAATCATCAGCGACGTCACTTCCGTCTTCCACGCGATATTTCCGGCGATAAAAATCACCGCGCCAAATTCACCAAG‑ACTACGGGTAAACGACAGCGCCACGCCCGCCACCAGCGCCGGAGAAAGCTCCGGCAGcac < 1:283854/229‑1 (MQ=255) gaACAGCAGC‑AGC‑AGAGATGCCGCGAGGATCACCGAAGCAATCGCGCTCGCTGCCGGGTAATCAAACTCCTGTAAGCGCACAAAAATCATCAGCGACGTCACTTCCGTCTTCCACGCGATATTTCCGGCGATAAAAATCACCGCGCCAAATTCACCAAG‑ACTACGGGTAAAGGACAGCGCCAcgccc > 2:300774/1‑187 (MQ=255) gaACAGCAGC‑AGC‑AGAGATGCCGCGAGGATCACCGAAGCAATCGCGCTCGCTGCCGGGTAATCAAACTCCTGTAAGCGCACAAAAATCATCAGCGACGTCACTTCCGTCTTCCACGCGATATTTCCGGCGATAAAAATCACCGCGCCAAATTCACCAAG‑ACTACGGGTAAACGACAGCGCCAcgccc < 1:300774/187‑1 (MQ=255) aCAGCAGC‑AGC‑AGAGATGCCGCGAGGATCACCGAAGCAATCGCGCTCGCTGCCGGGTAATCAAACTCCTGTAAGCGCACAAAAATCATCAGCGACGTCACTTCCGTCTTCCACGCGATATTTCCGGCGATAAAAATCACCGCGCCAAATTCACCAAG‑ACTACGGGTAAACGACAGCGCCACGCCCGCCACCAGCCCCGGCAAAAACCCCGGACGCACCACTTTCCAGaa > 2:344916/1‑229 (MQ=255) caccagc‑ggc‑agGGATGCCGCGAGGATCACCGAAGCAATCGGGCTCGCTGCCGGGTAATCGAACTCCTGTAAGCGCACAAAAATCATCAGCGACGTCACTTCCGTCTCCCACGCGATATTTCCGGCGATAAAAATCACCGCGCCAAATTCACCAAG‑ACTACGGGTAAACGACAGCGCCACGCCCGCCACCAGCGCCGGAGAAAGCTCCGGCAGCACCACTTTGCAGaaa < 2:509458/226‑1 (MQ=255) cagc‑agc‑agCGATGCCGCGAGGATCACCGAAGCAATCGCGCTCGCTGCCGGGTAATCAAACTCCTGTAAGCGCACAAAAATCATCAGCGACGTGACTTCCGTCTTCCACGCGATATTTCCGGCGATAAAAATCACCCCGCCAAATTCCCCAAA‑ACCACGGGTAAAAGACAGCGCCACGCCCCCCCCCAACGCCGGAACAAGCCCCGgcccgcccaccttcacaaacaac > 2:390426/1‑208 (MQ=255) cagc‑agc‑agAGATGCCGCGAGGATCACCGAAGCAATCGCGCTCGCTGCCGGGTAATCAAACTCCTGTAAGCGCACAAAAATCATCAGCGACGTCACTTCCGTCTTCCACGCGATATTTCCGGCGATAAAACTCACCGCGCCAAATTCACCCAG‑ACTACGGGTAAACGACAGCGACACGCCCGCCCCCACCACCGGAGAAAGCCCCGGCCCCACCACttttccacaactc > 2:29461/1‑219 (MQ=255) gc‑agAGATTCCACGGAGATCCCCCAAGCACACTCCGTCGCTGCCAGTAAACCAAACCCCTTCAAGCGCAGAAAAATCATCAGGCACGGCACTTCCGTTCTCCACCGGATAATTCCGGCGATAAAAATCACCGCGCATAATCCCCTAAG‑AGTACGGTTAAACGACAGCGCCACGACCGCCACCAGCGTCGGAGAAAGCTCCGGCAGCACCACTTTGCAGAACCTCTGCCa < 2:427553/229‑1 (MQ=255) aTGCCGCGAGGAGCACCGAAGCAATCGCGCTCGCTGCCGGGTAATCAAACTCCTGTAAGCGCACAAAAATCATCAGCGACGTCACTTCCGTCTCCCACGCGATATTTCCGGCGATAAAAATCACCGCGCCAAATTCACCAAG‑CCTACGGGTGAACGACAGCGCCACGCCCGCCACCCCAGTCGGGGAAAGCTCAGGAAGCGCCACTGTGAGGACACTCTCCCcgcgggg > 2:489881/1‑226 (MQ=255) cccGAAGCCATCGCCCTCGCTGCCCGGTAATCAAACTACTGTAAGCCCACAAAAATCATCAGCGACGTCACTTCCGTCTTCCACGCGATATTTCCGGCGATAAAAATCACCGCGCCAAATTCACCAAG‑ACTACGGGTAAACGACAGCGCCACGCCCGCCACCAGCGCCGGAGAAAGCTCCGGCAGCACCACTTTGCAGAAACTCTGCCAGCGCGTTGCACCAAGCGtt < 1:702219/227‑1 (MQ=255) aGCAACCGCGCTCGTCGCCGGGTAATCAAACTCCTGGAAGCGCACAAAAATCATCAGCGACGTCACTTCCGTCTTCCACGCGATATTTCCGGCGATAAAAATCACCGCGCCAAATTCACCAAG‑ACTACGGGTAAACGACAGCGCCACGCCCGCCACCAGCGCCGGAGAAAGCTCCGGCAGCACCACTTTGCAGAAACTCTGCCAGCGCGTTGCACCAAGCGTTTccgc < 1:707011/228‑1 (MQ=255) accgcgcccgcgccCGGGTACTCAAACTCCTGTAAGCCCTCAAAAATAATCAGCAGCGCCCCTTCCTTCTTCCACGCGATATTTCCGGCAATAAAAATCCCCGCGCCAAATTCCCCAAG‑ACTGCGGGTAAACGACAGCGCCACGCCCGCCACCAGCGCCGGAGAAAGCTCCGGCAGCACCACTTTGCAGAAACTCTGCCAGCGCGTTGCACCAAGCGTTTCCGCCGct < 2:418759/226‑1 (MQ=255) aTCGCGCTCGCTGCCGGGTAATCAAACTCCTGTAAGCGCACAAAAATCATCAGCGACGTCACTTCCGTCTTCCACGCGATATTTCCGGCGATAAAAATCACCGCGCCAAATTCACCAAG‑ACTACGGGTAAACGACAGCGCCACGCCCGCCACCAGCGCCGGAGAAAGCTCCGGCAGCACCACTTTGCAGAAACTCTGCCATCGCGTTGCACCAAGCGATTCcgccgcg > 1:258686/1‑227 (MQ=255) tCGCGCTCGCTGCCGGGTAATCAAACTCCTGTAAGCGCACAAAAATCATCAGCGACGTCACTTCCGTCTTCCACGCGATATTTCCGGCGATAAAAATCACCGCGCCAAATTCACCAAG‑ACTACGGGTAAACGACAGCGCCACGCCCGCCACCAGCGCCGGAGAAAGCTCCGGCAGCACCACTTTGCAGAAACTCTGCCAGCGCGTTGCACCAAGCGTTTCCGCCGcttc > 1:643368/1‑229 (MQ=255) tCGCGCTCGCTGCCGGGTAATCAAACTCCTGTAAGCGCACAAAAATCATCAGCGACGTCACTTCCGTCTTCCACGCGATATTTCCGGCGATAAAAATCACCGCGCCAAATTCACCAAG‑ACTACGGGTAAACGACAGCGCCAAGCCAGCCACCAGCGCCGGCGAAAGCTCCGCCAGCACCACTTTCCAAAAACCCTTCACACGCGTTGAAACaacagataccaccactct > 2:12226/1‑213 (MQ=255) gctcgctGCCCGGTAATCAAACTCCTGTAAGCGCACAAAAACCATCAGCGACGTCACTTCCGTCTTCCACGCGATATTGCCGGCGATAAAAACCACCGCGCCAAATTCACCAAG‑ACTACGGGTAAACGACAGCGCCACGCCCGCCACCAGCGCCGGAGAAAGCTCCGGCAGCACCACTTTGCAGAAACTCTGCCAGCGCGTTGCACCAAGCGTTTCCGCCGCTTCTTCa < 1:344916/229‑1 (MQ=255) tAAGCGCACAAAAATCATCAGCGACGTCACTTCCGTCTTCCACGCGATATTTCCGGCGATAAAAATCACCGCGCCAAATTCATCAAG‑ACTACGGGTAAACGACAGCGCCACGCCCGCCACCAGCGCCGGAGAAAGCTCCGGCAGCACCACTTTGCAGAAACTCTGCCAGCGCGTTGCACCAACCGTTTCCGCCGCTTCTCCATATTCCGGGCCTAACCCTTCCAGCAcc > 1:485541/1‑229 (MQ=255) accccaaaaaaaCCATCAGCGACGTCACTTCCGTCTCCCACGCGATATTCCCGCCGAAAAAAATCCCCGCCCCAAATGCACCAAG‑ACTACGGGTAAACGCCAGCGCCCCGCCCGCCACCAGCGCCGGAGAAAGCTCCGGCAGCACCACTTTGCAGAAACTCTGCCAGCGCGTTGCACCAAGCGTTTCCGCCGCTTCTTCATATTCCGGGCCTAACTCTTCCAGCACCgg < 2:643367/222‑1 (MQ=255) aGCGCACAAAAATCATCAGCGACGTCACTTCCGTCTTCCACGCGATATTTCCGGCGATAAAAATCACCGCGCCAAATTCACCAAG‑ACTACGGGTAAACGACAGCGCCACGCCCGCCACCAGCGCCGGAGAAAGCTCCGGCAGCACCACTTTGCAGAAACTCTGCCAGCGCGTTGCACCAAGCGTTTCCGCCGCTTCTTCATATTCCGGGCCTAACTCTTCCAGCACCgg < 1:178046/229‑1 (MQ=255) ctcaaaaaaaTCATCCCCGCCCTCCCTCCCCTCCTCCACCGGAATTTTCCGGCGAAAAAACTCCCCGCCCCAAATTCCCCAAG‑CATACGGGTAAACGACAGCGCCACGCCCGCCACCAGCGCCGGAGAAAGCTCCGGCAGCACCACTTTGCAGAAACTCTGCCAGCGCGTTGCACCAAGCGTTTCCGCCGCTTCTTCATATTCCGGGCCTAACTCTTCCAGCACCGGCt < 2:12408/224‑1 (MQ=255) gcACAAAAATCATCAGCGACGTCACTTCCGTCTTCCACGCGATATTTCCGGCGATAAAAATCACCGCGCCGAATTCACCAAG‑ACTACGGGTAAACGACAGCGCCACGCCCGCCACCAGCGCCGGAGCAAGCTCCGGCCGCACCACTTTGCAGAAACTCTGCCCGCGCGTTGACCCAACCGTTTCCGCCGCTTATTCCACTCCCGGGGCAAACCCTTCCAACAACGGcg > 2:319201/1‑227 (MQ=255) catcaGCGACGCCACTTCCGTCTCCCACGCGATATTTCCGGCGATAAAAATCACCGCGCCAAATTCACCAAG‑ACTACGGGTAAACGACAGCGCCACGCCCGCCACCAGCGCCGGAGAAAGCTCCGGCAGCACCACTTTGCAGAAACTCTGCCAGCGCGTTGCACCAAGCGTTTCCGCCGCTTCTTCATATTCCGGGCCTAACTCTTCCAGCACCGGCTGCACGGTACg < 1:458746/228‑1 (MQ=255) aatttgttataaaggacaggTCTCCCACGGAATATTTCCGGCGAAAAAAACCCCCGCCCCAAATTCCCCAAG‑CCCACGGGTAAACGCCAGCGCCACGCCCGCCCCCAGCGCCGGAGAAAGCTCCGGCAGCACCACTTTGCAGAAACTCTGCCAGCGCGTTGCACCAAGCGTTTCCGCCGCTTCTTCATATTCCGGGCCTAACTCTTCCAGCACCGGCTGCACGGTACGc < 2:192840/210‑1 (MQ=255) tCTTCCACGCGATATTTCCGGCGATAAAAATCACCGCGCCAAATTCACCAAG‑ACTACGGGTAAACGACAGCGCCACGCCCGCCACCAGCGCCGGAGAAAGCTCCGGCAGCACCACTTTGCAGAAACTCTGCCAGCGCGTTGCACCAAGCGTTTCCGCCGCTTCTTCATATTCCGGGCCTAACTCTTCCAGCACCGGCTGCACGGTACGCACCACAAACGGACGGCTgt > 1:701751/1‑227 (MQ=255) tCCACGCGATATTTCCGGCGATAAAAATCACCGCGCCAAATTCACCAAG‑ACTACGGGTAAACGACAGCGCCACGCCCGCCACCAGCGCCGGAGAAAGCTCCGGCAGCACCACTTTGCAGAAACTCTGCCAGCGCGTTGCACCAAGCGTTTCCGCCGCTTCTTCATATTCCGGGCCTAAc < 1:96005/179‑1 (MQ=255) tCCACGCGATATTTCCGGCGATAAAAATCACCGCGCCAAATTCACCAAG‑ACTACGGGTAAACGACAGCGCCACGCCCGCCACCAGCGCCGGAGAAAGCTCCGGCAGCACCACTTTGCAGAAACTCTGCCAGCGCGTTGCACCAAGCGTTTCCGCCGCTTCTTCATATTCCGGGCCTAAc > 2:96005/1‑179 (MQ=255) cgcgATTTTCCCGGCGAAAAAACTCACCGCGCCAAATTCCCCAAG‑CCTCCGGGTAACCGACAGCGCCACGCCCGCCACCAGCGCCGGAGAAAGCTCCGGCAGCACCACTTTGCAGAAACTCTGCCAGCGCGTTGCACCAAGCGTTTCCGCCGCTTCTTCATATTCCGGGCCTAACTCTTCCAGCACCGGCTGCACGGTACGCACCACAAACGGAATGCTGGTAAAGGcc < 1:605875/229‑1 (MQ=255) gATATTTCCGGCGATAAAAATCACCGCGCCAAATTCACCAAG‑ACTACGGGTAAACGACAGCGCCACGCCCGCCACCAGCGCCGGAGAAAGCTCCGGCAGCACCACTTTGCAGAAACTCTGCCAGCGCGTTGCACCAAGCGTTTCCGCCGCTTCTTCATATTCCGGGCCTAACTCTTCCAGCACCGGCTGCACGGTACGc > 1:192840/1‑199 (MQ=255) gCGATAAAAATCACCGCGCCAAATTCACCAAG‑ACTACGGGTAAACGACAGCGCCACGCCCGCCACCAGCGCCGGAGAAAGCTCCGGCAGCACCACTTTGCAGAAACTCTGCCAGCGCGTTGCACCAAGCGTTTCCGCCGCTTCTTCATATTCCGGGCCTAACTCTTCCAGCACCGGCTGCACGGTACGCACCACAAACGGAATGCTGTTAAAGGCCATAGCAACCGCaa > 1:710677/1‑229 (MQ=255) tAAAAATCACCGCGCAAAATGCACCAAG‑CCCACGGTTAACCGACAGCGCCACGCCCGCCACCAGCGCCGGAGAAAGCTCCGGCAGCACCACTTTGCAGAAACTCTGCCAGCGCGTTGCACCAAGCGTTTCCGCCGCTTCTTCATATTCCGGGCCTAACTCTTCCAGCACCGGCTGCACGGTACGCACCACAAACGGAATGCTGGTAAAGGCCATAGCCACCGCAATccc < 1:319201/229‑1 (MQ=255) agaccaccggccaaaaTTCCCCAAG‑TCTACGGGTAAACGACAGCCCCACGCCCGGCCCCCGCGCCGGAGAAAGCTCCGGCAGCACCACTTTGCAGAAACTCTGCCAGCGCGTTGCACCAAGCGTTTCCGCCGCTTCTTCATATTCCGGGCCTAACTCTTCCAGCACCGGCTGCACGGTACGCACCACAAACGGAATGCTGGTAAAGGCCATAGCCACCGCAATCCCCAg < 1:692914/216‑1 (MQ=255) aagccACCGCGCCAAATTCCCCAAGCACT‑CGGGAACACGACCGCGCCCAGCCCGCCACCAGCGCCGGAGAAAGCTCCGGCAGCACCACTTTGCAGAAACTCTGCCAGCGCGTTGCACCAAGCGTTTCCGCCGCTTCTTCATATTCCGGGCCTAACTCTTCCAGCACCGGCTGCACGGTACGCACCACAAACGGAATGCTGGTAAAGGCCATAGCCACCGCAATCCCCAg < 1:220179/225‑1 (MQ=255) aactCACCGGCCAAAATTCCCCAGG‑CCTACGGGTAACCGAAAACCCCCCGCCCGCCACCAGCGCCGGAGAAAGCTCCGGCAGCACCACTTTGCAGAAACTCTGCCAGCGCGTTGCCCCAAGCGTTTCCGCCGCTTCTTCATATTCCGGGCCTAACTCTTCCAGCACCGGCTGCACGGTACGCACCACAAACGGAATGCTGGTAAAGGCCATAGCCACCGCAATCCCCAg < 1:12226/226‑1 (MQ=255) aaagccccGCGCCAAATCCACCAAG‑ACTACGGGTAAACGACAGCGCCACGCCCGCCACCAGCGCCGGAGAAAGCCCCGGCAGCACCACTTTGCAGAACCTCTGCCAGCGCGTTGCACCAAGCGTTTCCGCCGCTTCTTCATATTCCGGGCCTAACTCTTCCAGCACCGGCTGCACGGTACGCACCACAAACGGAATGCTGGTAAAGGCCATAGCCACCGCAATCCCCAg < 1:355203/223‑1 (MQ=255) aacccccccccAAATTCACCAAG‑AGTACGGGAAAACGCCACCGCCACGCCCGCCACCAGCGCCGGAGAAAGCCCCGGCAGCACCACTTGGCAGAAACTCTGCCAGCGCGTTGCACCAAGCGTTTCCGCCGCTTCTTCATATTCCGGGCCTAACTCTTCCAGCACCGGCTGCACGGTACGCACCACAAACGGAATGCTGGTAAAGGCCATAGCCACCGCAATCCCCAGcc < 2:686906/220‑1 (MQ=255) aTCACCGCGCCAAATTCACCAAG‑ACTACGGGTAAACGACAGCGCCACGCCCGCCACCAGCGCCGGAGAAAGCTCCGGCAGCACCACTTTGCAGAAACTCTGCCAGCGCGTTGCACCAAGCGTTTCCGCCGCTTCTTCATATTCCGGGCCTAACTCTTCCAGCACCGGCTGCACGGTACg > 1:385476/1‑179 (MQ=255) | TTCAATTGGGTAACTTCCGCCATTAATGACCTACCACACGCCGACCAAAGCGACTTTGCAGAGTGTTAATTGAGAACAGCAGC‑AGC‑AGAGATGCCGCGAGGATCACCGAAGCAATCGCGCTCGCTGCCGGGTAATCAAACTCCTGTAAGCGCACAAAAATCATCAGCGACGTCACTTCCGTCTTCCACGCGATATTTCCGGCGATAAAAATCACCGCGCCAAATTCACCAAG‑ACTACGGGTAAACGACAGCGCCACGCCCGCCACCAGCGCCGGAGAAAGCTCCGGCAGCACCACTTTGCAGAAACTCTGCCAGCGCGTTGCACCAAGCGTTTCCGCCGCTTCTTCATATTCCGGGCCTAACTCTTCCAGCACCGGCTGCACGGTACGCACCACAAACGGAATGCTGGTAAAGGCCATAGCCACCGCAATCCCCAGCC > NC_000913/2541655‑2542092 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |