| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,739,601 | T→C | 13.8% | E156G (GAG→GGG) | tyrA ← | fused chorismate mutase T/prephenate dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,739,601 | 0 | T | C | 13.8% | 143.0 / 2.3 | 60 | E156G (GAG→GGG) | tyrA | fused chorismate mutase T/prephenate dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base T (30/21); new base C (5/4); total (35/25) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCTCCAGAAACCATTGGTATGCTTCCGGTTTACGTCCATCACACCAGACCACAACTTGCTTTGCCAGGCTACCGCTGTCCGGACCGAACATCGGGTGTAGCCCCAGCACCGGACCATCATGCGCCACCAGCATGGCCTGTAATGGCCCATTTTTCACTGATGCCAGATCGACCAGAATAC‑AATCTTTCGGTAAAGGCGGTAATTTGCCAATAACTTGCTCAGTAACGTGGATTGGCACACTAACAATCACCATTCCGGCATCGGCAACA‑ATATCAGCCGCTCGATCCCAGTCATGTTGCTCCAGAATCCGCACCTGATAACCCGAGAGGGTCAGCATCTTCTCGA‑ACAGGCGTCCCATCTGACCGCCACCGCCGACGATAACCACCGGACGCAGTGACGGACAAAGTGTTTTAAATCCTTTGTCGTTTTCACTGGAGTAAGATT > NC_000913/2739383‑2739826 | gCTCCAGAAACCATTGGTATGCTTCCGGTTTACGTCCATCACACCAGACCACAACTTGCTTTGCCAGGCTACCGCTGTCCGGACCGAACATCGGGTGTAGCCCCAGCACCGGACCATCATGCGCCACCAGCATGGCCTGTAATGGCCCATTTTTCACTGATGCCCGATCGACCAGAATAC‑AATCTTTCGGTAAAGGCGGAAATTTGCCAAAAAATTACTccaaaaagtg > 2:92810/1‑220 (MQ=255)gCTCCAGAAACCATTGGTATGCTTCCGGTTTACGTCCATCACACCAGACCACAACTTGCTTTGCCAGGCTACCGCTGTCCGGACCGAACATCGGGTGTAGCCCCAGCACCGGACCATCATGCGCCACACGCATGGCCTGTAATGGCCCATTTTTCCCTCATGCCAGATCGACCAGAATAC‑AATCTTTCGTTAAAGTCGGATATTTGCCACAAAACTGCTCaagacctgg > 2:464603/1‑221 (MQ=255) gcccggAAACACTTGGTTTTCTTCCGTATTACGGCCAGCACACCAGACCACAACTTGCTTTGCCAGGCTACCGCTGTCCGGACCGAACATCGGGTGTAGCCCCAGCACCGGACCATCATGCGCCACCAGCATGGCCTGTAATGGCCCATTTTTCACTGATGCCAGATCGACCAGAATAC‑AATCTTTCGGTAAAGGCGGTAATTTGCCAATAACTTGCTCAGTAACg < 2:79272/221‑1 (MQ=255) cAGAAACCTTTGGTATGTTTCCGGTTTTCGTCCATCCCCCCAGCCCGCAACTTGCTTTGCCAGGCTACCGCTGTCCGGACCGAACATCGGGTGTAGCCCCAGCACCGGACCATCATGCGCCACCAGCATGGCCTGTAATGGCCCATTTTTCACTGATGCCAGATCGACCAGAATAC‑AATCTTTCGGTAAAGGCGGTAATTTGCCAATAACTTGCTCAGTAACGTGGAtt < 2:162152/229‑1 (MQ=255) aGAAACCTTTGGTATCCTTCCGGTTTACGTCCATCACCCCAGACCACAACTTGCTTTGCCAGGCTTCCGCTTTCCGGACCGAACATCGGGTGTAGCCCCAGCCCCGGACCATCATGCGCCACCAGCATGGCCTGTAATGGCCCATTTTTCACTGATGCCAGATCGACCAGAATAC‑AATCTTTCGGTAAAGGCGGTAATTTGCCAATAACTTGCTCAGTAACGTGGATTg < 2:383929/229‑1 (MQ=255) gAAACCATTGGTATGCTTCCGGTTTACGTCCATCACACCAGACCACAACTTGCTTTGCCAGGCTACCGCTGTCCGGACCGAACATCGGGTGTAGCCCCAGCACCGGACCATCATGCGCCACCAGCATGGCCTGTAATGGCCCATTTTTCACTGATGCCAGATCGACCAGAATAC‑AATCTTTCGGTAAAGGCGGTAATTTGCCAATAAATTGCTCAGTAACGTGGATTgg > 1:219386/1‑229 (MQ=255) acccATTGTTTAGCTTCCGGTTCACCTCCATCCCACCAAGCCTCTACTTGCGTTTCCAGGCTACCGCTGGCCGGACCGAGCAGCGGGTGTAGCCCCAGCACCGGACCATCATGCGCCCCCAGCATGGCCTGTAATGGCCCATTTTTCACTGATGCCAGATCGACCAGAATAC‑AATCTTTCGGTAAAGGCGGTAATTTGCCAATAACTTGCTCAGTAACGTGGATTGGca < 2:361068/227‑1 (MQ=255) aaccagggtggtggttCCGGGTTACGGCCATCCCACCAGAACGAAACTTGCTTGGCCAGGCGTCCGCGGTCCGGAACGAACATCGGGTGTAACCCCAGCACCGGACCAGCAAGCGCCCCCAGCATGGCCTGTAATGGCCCATTTTTCACTGATGCCAGATCGACCAGAATAC‑AATCTTTCGGTAAAGGCGGTAATTTGCCAATAACTTGCTCAGTAACGTGTATTGGca < 2:404495/215‑1 (MQ=255) cTTCCGGTTTACGTCCATCACACCAGACCACAACTTGCTTTGCCAGGCTACCGCTGTCCGGACCGAACATCGGGTGTAGCCCCAGCACCGGACCATCATTCGCCACCAGCATGGCCTGTAATGGCCCATTTTTCACTGATCCCAGATCAAACCGAATAC‑AAGCTTTCGCGAAAGGCGGTAATTTTGCAATAACTTGCTCAATAACCGGGGTGGGGACACCaacaaaca > 2:641947/1‑228 (MQ=255) cTTCCGGTTTACGTCCATCACACCAGACCACAACTTGCTTTGCCAGGCTACCGCTGTCCGGACCGAACATCGGGTGTAGCCCCAGCACCGGACCATCATGCGCCACCAGCATGGCCTGTAATGGCCCCTTTTTCACTGATGCCAGATCGACCAGAATAC‑AATCTTTCGGTAAAGCCGGTAATTTGCCAATAACTTGCCAATGAACGTGGCATGGCACAATaacaaaca > 2:17986/1‑228 (MQ=255) cTTCCGGTTTACGTCCATCACACCAGACCACAACTTGCTTTGCCAGGCTACCGCTGTCCGGACCGAACATCGGGTGTAGCCCCAGCACCGGACCATCATGCGCCACCAGCATGGCCTGTAATGGCCCATTTTTCACTGATGCCAGATCGACCAGAATAC‑AATCTTTCGTTAAATGCGGTAATTTTCCAATAACTGGCTCAGTAACGGGGATAGGCTCACTAACAATCAc > 1:385888/1‑229 (MQ=255) cTTCCGGTTTACGTCCATCACACCAGACCACAACTTGCTTTGCCAGGCTACCGCTGTCCGGACCGAACATCGGGTGTAGCCCCAGCACCGGACCATCATGCGCCACCAGCATGGCCTGTAATGGCCCATTTTTCACTGATGCCAGATCGACCAGAATAC‑AATCTTTCGGTAAAGGCGGTAATTTGCCAATAACTTGCTCAGTAAAGTGGATTGGCACACAAAAAATCAc > 1:271982/1‑229 (MQ=255) aCGTCCATCACACCAGACCACAACTTGCTTTGCCAGGCTACCGCTGTCCGGACCGAACATCGGGTGTAGCCCCAGCACCGGACCATCATGCGCCACCAGCATGGCCTGTAATGGCCCATTTTTCACTGATGCCAGATCGACCAGAATAC‑AATCTTTCGGTAAAGGCGGTAATTTGCCAATAACTTGCTCAGTAACGTGGATTGGCACACTAACAATCACCATTCCGGCa < 1:17986/229‑1 (MQ=255) ctccccccaaccctaaaCTTGCTTTTCCAGGCTACCGCCTTCCGGACCGAACATCGGGTGTAGCCCCAGCACCGGACCATCATGCGCCACCAGCATGGCCTGTAATGGCCCATTTTTCACTGATGCCAGATCGACCAGAATAC‑AATCTTTCGGTAAAGGCGGTAATTTGCCAATAACTTGCTCAGTAACGTGGATTGGCACACTAACAATCACCATTCCGGCATCGGca < 2:322331/214‑1 (MQ=255) tCACACCAGACCACAACTTGCTTTGCCAGGCTACCGCTGTCCGGACCGAACATCGGGTGTAGCCCCAGCACCGGACCATCATGCGCCACCAGCATGGCCTGTAATGGCCCATTTTTCACTGATGCCAGATCGACCAGAATAC‑AATCTTTCCGTAAAGGCGGTACATTGCCAATAACTTTCCCAGCAACGTGGATTGGCACACTACAAATCACCCTTCCCGCATCGGcaa > 2:613984/1‑229 (MQ=255) cacaCCAGCCCGCAACTTGTTTTGCCAGGGTACAGCTTCCCGGACCGAACCTCGGGTGTAGCCCCGGCCCCTGACCAGCATGCGCCACCAGCATGGCGTGTAATGGCCCATTTTTCACTGATGCCAGATCGACCAGAATAC‑AATCTTTTGGTAAAGGCGGTAATTTGCCAATAACTTGCTCAGTAACGTGGATTGGCACACTAACAATCACCATTCCGGCATCGGcaa < 2:690118/228‑1 (MQ=255) gACCACAACTTGCTTTGCCAGGCTACCGCTGTCCGGACCGAACATCGGGTGTAGCCCCAGCACCGGACCATCATGCGCCACCAGCATGGCCTGTAATGGCCCATTTTTCACTGATGCCAGATCGACCAGAATAC‑AATCTTTCGGTAAAGGCGGTAATTTGCCAATACCTTGCCCAGTAACATGGATTGGCACCCTCACAATCACCATTCCGGCATCGGCAACA‑ATATc > 1:585371/1‑228 (MQ=255) cacaACTTGCTTTGCCAGGCTACCGCTGTCCGGACCGAACATCGGGTGTAGCCCCAGCACCGGACCATCATGCGCCACCAGCATGGCCTGTAATGGCCCATTTTTCACTGATGCCAGATCGACCAGAATAC‑AATCTTTCGGTAAAGGCGGTAATTTGCCAATAAACTTCTCAGTAACGTGGGTTGGCACACTAACAATCAACATTCCGGCATCGGCAAAA‑atataacac > 2:132132/1‑224 (MQ=255) caACTTGCTTTGCCAGGCTACCGGTGTCCGGACCGAACATCGGGTGTAGCCCCAGCACCGGACCATCATGCGCCACCAGCATGGCCTGTAATGGCCCATTTTTCACTGATGCCAGATCGACCAGAATAC‑AATCTTTCGGTAAAGGCGGTAATTTGCCAATAACTTGCTCAGTAACGTGGATTGGCACACTAACAATCACCATTCCGGCATCGGCAACA‑ATATCAGCCGc < 1:191945/229‑1 (MQ=255) accgtGCCTTGCCAGGCTACCGCTGTCCGGACCGAACATGGGGTGTAGCCCCAGCAACGGAACATCATGCGCCACCAGCATGGCCTGTAATGGCCCATTTTTCACTGATGACAGATCGACCAGAATAC‑AATCTTTCGGTAAAGGCGGTAATTTGCCAATAACTTGCTCAGTAACGTGGATTGGCACACTAACAATCACCATTCCGGCATCGGCAACA‑ATATCAGCCGCt < 1:689473/225‑1 (MQ=255) aaCTTGGCTTGCCATGCTACCGCTGGCCGGACCGGACACAGGTGGTAGCCCCAGGACCGGGCCATCATGCGCCTCCAGCATGGCCTGTAATGGCCCATTTTTCACTGATGCCAGATCGACCAGAATAC‑AATCTTTCGGTAAAGGCGGTAATTTGCCAATAATTTGCTCAGTAACGTGGATTGGCACACTAACAATCACCATTCCGGCATCGGCAACA‑ATATCAGCCGCt < 1:393801/229‑1 (MQ=255) cTTGCTTTGCCAGGCTACCGCTGTCCGGACCGAACATCGGGTGTAGCCCCAGCACCGGACCATCATGCGCCACCAGCATGGCCTGTAATGGCCCATTTTTCACTGATGCCAGATCGACCAGAATAC‑AATCTTTCGGTAAAGGCGGTAATTTGCCAATAACTTGTCCAGTAACATGGATTGGCCCACTACAAATCACCATTCCGGCATCGGCCAAC‑ATATCAGCCGCCCg > 1:733141/1‑229 (MQ=255) gCCAGGCTACCGCTGTCCGGACCGAACATCGGGTGTAGCCCCAGCACCGGACCATCATGCGCCACCAGCATGGCCTGTAATGGCCCATTTTTCACTGATGCCAGATCGACCCGAATAC‑AATCTTTCGGTAAAGGCGGTAATTTGCCAATAACTTGCTCAGTAACGTGGATTGGCACACTAACAATCACCATTCCGGCATCGGCTACA‑AAATCAGCCGCTCGacaccat > 1:690630/1‑222 (MQ=255) gCCAGGCTACCGCTGTCCGGACCGAACATCGAGTGTAGCCCCAGCACCGGACCATCATGCGCCACCAGCATCGCCTGTAATGGCCCATTTTTTACTGATGCCAGATCGACCAGAATAC‑AATCTTTCGGTAAAGGCGGTAATTTGCCAATAACTTGGTCAATAACATGGATTGGCACACTAACAAACACCATTCCCGGATCGCCAACA‑AAACAAACCGCTCGCTCCCAg > 1:656483/1‑228 (MQ=255) ggCTACCGGTTTCCCGACCGAACATCGGGTTTACCCCAACGACCGGACCATCATGCGCCACCAGCATGGCCTGTAATGGCCCATTTTTCACTGATGCCAGATCGACCAGAATAC‑AATCTTTCGGTAAAGGCGGTAATTTGCCAATAACTTGCTCAGTAACGTGGATTGGCACACTAACAATCACCATTCCGGCATCGGCAACA‑ATATCAGCCGCTCGATCCCAGTCATg < 1:259649/229‑1 (MQ=255) ggCTACCGCTTTCCGGACCGAACAGCGGGTGTAGCCCCAGCACCGGACCATCATGCGCCACCAGCATGGCCTGTAATGGCCCATTTTTCACTGATGCCAGATCGACCAGAATAC‑AATCTTTCGGTAAAGGCGGTAATTTGCCAATAACTTGCTCAGTAACGTGGATTGGCACACTAACAATCACCATTCCGGCATCGGCAACA‑ATATCAGCCGCTCGATCCCAGTCATg < 1:480929/229‑1 (MQ=255) tCCGGACCGAACATCGGGTGTAGCCCCAGCACCGGACCATCATGCGCCACCAGCATGGCCTGTAATGGCCCATTTTTCACTGATGCCAGATCGACCAGAATAC‑AATCTTTCGGTAAAGGTGGTAATTTGCCAATAACTTGCTCAGTAACGTGGATTGGACCCCTAACAATCACCATTCCGTCCTCGGCAACA‑ATATCAGCCCCTCGCTccacgccaagtgactccaaaa > 2:126489/1‑210 (MQ=255) tCCGGACCGAACATCGGGTGTAGCCCCAGCACCGGACCATCATGCGCCACCAGCATGGCCTGTAATGGCCCATTTTTCACTGATGCCAGATCGACCAGAATAC‑AATCTTTCGGTAAAGGCGGTAATTTGCCAATAACTTGCTCAGGAACGGTGATTGGGACACTAACAATAACCATTCCCGGATC‑GCAACACAAATAAGCCGCTCTCACCCAGCCATATTTCGCCaaaa > 2:397951/1‑229 (MQ=255) aCCGAACATCGGGTGTAGCCCCAGCACCGGACCATCATGCGCCACCAGCATGGCCTGTAATGGCCCATTTTTCACTGATGCCAGATCGACCAGAATAC‑AATCTTTCGGTAAAGGCGGTAATTTGCCAATAACTTGCTCAGTAACGTGGATTGGCACACTAACAATCACCATTCCGGCATCGGCACCA‑ATATCAGCCGCCCGATCCCAGTCATGTTGCTCCAGAATCCg > 1:43919/1‑228 (MQ=255) aCATCGGGTGTAGCCCCAGCACCGGACCATCATGCGCCACCAGCATGGCCTGTAATGGCCCATTTTTCACTGATGCCAGATCGACCAGAATAC‑AATCTTTCGGTAAAGGCGGTAATTTGCCAATAACTTGCTCAGTAACGTGGATTGGCACACTAACAATCACCATTCCGGCATCGGCAACA‑ATATCAGCCGCTCGATCCCCGTCATGTTGCTCCAGAATCCCCACCTg > 1:411437/1‑229 (MQ=255) aCATCGGGTGTAGCCCCAGCACCGGACCATCATGCGCCACCAGCATGGCCTGTAATGGCCCATTTTTCACTGATGCCAGATCGACCAGAATAC‑AATCTTTCGGTAAAGGCGGTAATTTGCCAATAACTTGCTCAGTAACGTGGATTGGCACACTAACAATCACCATTCCGGCATCGGCAACA‑ATATCAGCCGCTCGATCCCAGTCAAGTTGCTCCCGAATCCGCACCTg > 1:512100/1‑229 (MQ=255) tCGGGTGGACCCCCAGCCCCGGCCCATCCTGCGCCACCAGCATGGCCTGTAATGGCCCATTTTTCACTGATGCCAGATCGACCAGAATAC‑AATCTTTCGGTAAAGGCGGTAATTTGCCAATAACTTGCTCAGTAACGTGGATTGGCACACTAACAATCACCATTCCGGCATCGGCAACA‑ATATCAGCCGCTCGATCCCAGTCATGTTGCTCCAGAATCCGCACCTGATa < 2:231212/229‑1 (MQ=255) gCCCCAGCACCGGACCATCATGCGCCACCAGCATGGCCTGTAATGGCCCATTTTTCACTGATGCCAGATCGACCAGAATAC‑AATCTTTCGGTAAAGGCGGTAATTTTACAATAACTTGCTCAGTAACGTGGATTGGCACCATACCAATCACCATTCCGCGCTCAGCAACA‑ATATCCACCGCCCGGACCCCGTCACGTTCCTCCACAAACCGCAcccggaaaacccaga > 2:674161/1‑215 (MQ=255) cgcgCACCGGACCATCATGCGCCACCAGCATGGCCTGTAATGGCCCATTTTTCACTGATGCCAGATCGACCAGAATAC‑AATCTTTCGGTAAAGGCGGTAATTTGCCAATAACTTGCTCAGTAACGTGGATTGGCACACTAACAATCACCATTCCGGCATCGGCAACA‑ATATCAGCCGCTCGATCCCAGTCATGTTGCTCCAGAATCCGCACCTGATAACCCGAGAGGGt < 1:690142/226‑1 (MQ=255) ccggctccGGACCATCCTGCGCACCCAGCATGGCCTGTAATGGCCCTTTTTTCACTGATGCCAGATCGACCAGAATAC‑AATCTTTCGGTAAAGGCGGTAATTTGCCAATAACTTGCTCAGTAACGTGGATTGGCACACTAACAATCACCATTCCGGCATCGGCAACA‑ATATCAGCCGCTCGATCCCAGTCATGTTGCTCCAGAATCCGCACCTGATAACCCGAGAGGGt < 2:264581/223‑1 (MQ=255) cccgccccGGACCTTCATGCGCCACCAGCATGGGCTGTAATGGCCCATTTTTCACTGATGCCAGATCGACCAGAATAC‑AATCCTTCGGTAAAGGCGGTAATTTGCCAATAACTTGCTCAGTAACGTGGATTGGCACACTAACAATCACCATTCCGGCATCGGCAACA‑ATATCAGCCGCTCGATCCCAGTCATGTTGCTCCAGAATCCGCACCTGATAACCCGAGAGGGt < 2:96086/223‑1 (MQ=255) cAGCACCGGACCATCATGCGCCACCAGCATGGCCTGTAATGGCCCATTTTTCACTGATGCCAGATCGACCAGAATAC‑AATCTTTCGGTAAAGGCGGTAATTTGCCAATAACTTTCTCAGTAACGTGGATTGGCACACTAACAATCACCATTCCGGCATCGGCAACA‑ATATCCGCCCCCCGGTCCCAGTCCTGTTGCTCCAGAAACCGCCCCTGAAAAACCCAAAggag > 2:101006/1‑226 (MQ=255) aGCACCGGACCATCATCCGCCACCAGCATGGCCTGTAATGGCCCATTTTTCACTGATGCCAGATCGACCAGAATAC‑AATCTTTCGGTAAAGGCGGTAATTCTCCAATAAATTGACCAGTAACAGTGATTGGCACACCAACAATCACCCTACCGGCCTCAGCAACA‑AAAATAGCCGACCCATCCCAGTCAAGTTATTCCAGAATCCGAAcaccatccacccaaagaggac > 2:507622/1‑209 (MQ=255) gCACCGGACCATCATGTGCCACCAGAATGGCCTGTAATGGCCCATTTTTCACTGATGCCAGATCGACCAGAATAA‑AATCTTTCGGTAAAGGCCGTAATTTGCCAATAACTTGTTCAGAAACTTCAATTTGCCCCCTCAAAATAACCATTTCGCGATCGGCAACA‑AAATAAACCGCCCACACCCAGTCAAGTTGCCCCAGAAACCCCACCCAAAAACCCCagagagcaag > 2:39035/1‑223 (MQ=255) gACCATCATGCGCCACCAGCATGGCCTGTAATGGCCCATTTTTCACTGATGCCAGATCGACCAGAATAC‑AATCTTTCGGTAAAGGCGGTAATTTGCCAATAACTTGCTCAGTAACGTGGATTGGCACACTAACAATCACCATTCCGGCATCGGCACCA‑ATATAAACCGCCCCCTCCCCCCCATGTTGCCCCACAAACCGCACCCCATAAACCGAAAGGGCCAGCAtct > 2:271037/1‑228 (MQ=255) gACCATCATGCGCCACCAGCATGGCCTGTAATGGCCCATTTTTCACTGATGCCAGATCGACCAGAATAC‑AATCTTTCGGTAAAGGCGGTAATTTGCCAATAACTTGCTCAGTAAAGTGGATTGGCACACTAACAATCACCATTCCGGCATCGGCAACA‑ATATAAGCCGCCCGATCCCCATCATGTTGCCCCAGAATCCACACCTGAAAACCCGGGAGGGCCAGCAtcc > 2:54623/1‑227 (MQ=255) tggcccaccgataTGGCCTGTTATGGCCCATTTTGCACTGATGCCAAATCGACCAGAATAC‑AATCTTTCGGTAAAGGCGGTAATTTGCCAATAACTTGCCCAGTAACGTGGATTGGCACACTAACAATCACCATTCCGGCATCGGCAACA‑ATATCAGCCGCTCGATCCCAGTCATGTTGCTCCAGAATCCGCACCTGATAACCCGAGAGGGTCAGCATCTTCTCGA‑ACa < 2:271982/217‑1 (MQ=255) tGCGCCACCAGCATGGCCTGTAATGGCCCATTTTTCACTGATGCCAGATCGACCAGAATAC‑AATCTTTCGGTAAAGGCGGTAATTTGCCAATAACTTGCTCAGTAACGTGGATTGGCACACTAACAATCACCATTCCGGCATCGGCAACA‑ATATCAGCCGCTCGATCCCAGTCATGTTGCTCCAGAATCCGCACCTGATAACCCGAGAGGGTCAGCATCTTCTCCa‑aa > 1:642232/1‑227 (MQ=255) ccccaGCATGGCCTGTAATGGTCCATTTTTCACTGAAGCCAGATCGACCAGAATAC‑AATCTTTCGGTAAAGGCGGTAATTTGCCAATAACTTGCTCAGTAACGTGGATTGGCACACTAACAATCACCATTCCGGCATCGGCAACA‑ATATCAGCCGCTCGATCCCAGTCATGTTGCTCCAGAATCCGCACCTGATAACCCGAGAGGGTCAGCATCTTCTCGA‑ACAGGCg < 1:132132/226‑1 (MQ=255) caccaGCATGGCCTGTAATGGCCCATTTTTCACTGATGCCAGATCGACCAGAATAC‑AATCTTTCGGTAAAGGCGGTAATTTGCCAATAACTTGCTCAGTAACGTGGATTGGCACACTAACAATCACCATTCCGGCATCGGCAACA‑ATATCAGCCGCTCGATCCCAGTCATGTTGCTCCAGAATCCGCACCTGATAACCCGAGAGGGTCAGCATCTTCTCGA‑ACAAGCg > 1:647547/1‑228 (MQ=255) tGTAATGGCCCATTTTTCACTGATGCCAGATCGACCAGAATAC‑AATCTTTCGGTAAAGGCGGTAATTTGCCAATAACTTGCTCAGGAACGTGGATTGGCACACTAACAATCACCATTCCGGCATCGGCAACA‑ATATCAGCCGCTCGATCCCAGTCATGTTGCTCCAGAATCCGCACCTGATAACCCGAGAGGGTCAGCATCTTCTCGA‑ACAGGCGTCCCATCTGaccgc > 1:311225/1‑229 (MQ=255) ggccATTTTTTCTTGATGCCAGA‑CTACCCAAAAACAAATCGTTCGGTAAGGGTGGTAATTTGCCAATAACGTGCCCATAAACGGGGATGGGCACCCAAACAAGCCCCATTCCGGCAGCGGAAACA‑ATACCAGCCCCTCGATCCCAGTCATGTTGCCCCAGAATCCGCACCGGATACCCCGAGAGGGTCAGCATCTTCCCGA‑ACAGGCGTCCCATCTGaccgccaccgc < 2:43919/226‑1 (MQ=255) cccATTTTTCACTGATGCCAGATCGACCAGAATAC‑AATCTTTCGGTAAAGGCGGTAATTTGCCAATAACTTGCTCAGTAACGTGGATTGGCACACTAAAAATCACCATTCCGGCATCGGCAACA‑ATATCAGCCGCTCGATCCCAGTCATGTTGCTCCAGAATCCGCACCTGGTAACCCGAGAGGGTCAGCCTCTTCTCGA‑ACAGGCGTCCCATCTGacccccaccccc > 1:711349/1‑228 (MQ=255) tttttCACTGATGCCAGATCGACCAGAATAC‑AATCTTTCGGTAAAGGCGGTAATTTGCCAATAACTTGCTCAGTAACGTGGATTGGCACACTAACAATCACCATTCCGGCATCGGCAACA‑ATATCAGCCGCCCGATCCCAGTCATGTTGCTCCAGAATCCGAACCTGATAACCCCAGAAGGTCAGCATCTTCTCCA‑AAAGGCGTCCCATCTAcccgcccccgcccccga > 1:736454/1‑224 (MQ=255) tGCCAGATCGACCAGAATAC‑AATCTTTCGGTAAAGGCGGTAATTTGCCAATAACTTGCTCAGTAACGTGGATTGGCACACTAAAAATCACCATTCCGGCATCGGCAACA‑ATATCAGCCGCTCGATCCCAGTCATGTTGCTCCAGAATCCGACCCTGATAACCCGAGAGGGTCAGCATCTTCTCGA‑ACAGGGGTCCCATCTGACCCCAACCGCCGACGATAAACACCgac > 1:736554/1‑227 (MQ=255) gACCAGAATAC‑AATCTTTCGGTAAAGGCGGTAATTTGCCAATAACTTGCTCAGTAACGTGGATTGGCACACTAACAATCACCATTCCGGCATCGGCAACA‑ATATCAGCCGCTCGATCCCAGTCATGTTGCTCCAAAATCCCCACCTGCAAAACCGCAAGGGGCCGCATCTTCTCGACACA‑GCGTCCCACCTGAACGCCACCGCCGCCGGTAACCCACGGACACAgaga > 2:326181/1‑228 (MQ=255) tCGGTAAAGGCGGTAATTTGCCAATAACTTGCTCAGTAACGTGGATTGGCACACTAACAATCACCATTCCGGCATCGGCAACA‑ATATCAGCCGCTCGATCCCAGTCATGTTGCTCCAGAATCCGCACCTGATAACCCGAGAGGGTCAGCATCTTCTCGA‑ACAGGCGTCCCATCTGACCGCCACCGCCGACGATAACCACCGGACGCAGTGACGGCCAAACGGTTTTaaa > 1:225850/1‑229 (MQ=255) tAAAGCGGGTAATTTGCAAATAACTTGCTCAGATACGTGGATTGGCACACTAACAACCCCCATTCCGGCATCGGAAACA‑ATATCAGCCGCTCGATCCCAGTCATGTTGCTCCAGAATCCGCACCTGATAACCCGAGAGGGTCAGCATCTTCTCGA‑ACAGGCGTCCCATCTGTCCGCCACCGCCGACGATAACCACCGGACGCAGTGACGGACAAAGTGTTTTAAATCCt < 1:641948/229‑1 (MQ=255) aaaaGGCGGTAATTTGCAAATAACTTGCCCAGTAACGTGGATTGGCCCACTAACAATCCCCATTCCGGCATGGGCAACA‑ATACCAGCCGCTCGATCCCAGTCATGTTGCTCCAGAATCCGCACCTGATAACCCGAGAGGGTCAGCATCTTCCCGA‑ACAGGCGTCCCATCTGACCGCCACCGCCGACGATAACCACCGGACGCAGTGACGGACAAAGTGTTTTAAATCCt < 1:464603/228‑1 (MQ=255) aGGCGGTAATTTGCCAATACCTTGCTAAGTAACGGGGATTGGCCAACTAACAATCACCATTCCGGCATCGGCAACA‑ATATCAGCCGCTCGATCCCAGTCATGTTGCTCCAGAATCCGCCCCTGATAACCCGAGAGGGTCAGCATCTTCTCGA‑ACAGGCGTCCCATCTGACCGCCACCGCCGACGATAACCACCGGACGCAGTGACGGACAAAGTGTTTTAAATCCTTTg < 1:92810/229‑1 (MQ=255) ttGCCAATAACTTGCTCAGTACCGGGGATTGGCACCCTAACAATCACCATTCCGGCATCGGCAACA‑ATATCAGCCGCTCGACCCCAGTCATGTTGCTCCAGAATCCGCACCTGATAACCCGAGAGGGTCAGCATCTTCTCGA‑ACAGGCGTCCCATCTGACCGCCACCGCCGACGATAACCACCGGACGCAGTGACGGACAAAGTGTTTTAAATCCTTTGTCGTTTTCAc < 1:101006/229‑1 (MQ=255) ttGCCAATAACTTGCCTAGTAACGGGGATGGGCACACTAACAATCACCATTCCGGCACCGGCAACA‑ATACCAGCCGCTCGATCCCAGTCATGTTGCTCCAGAATCCGCACCTGATAACCCGAGAGGGTCAGCATCTTCTCGA‑ACAGGCGTCCCATCTGACCGCCACCGCCGACGATAACCACCGGACGCAGTGACGGACAAAGTGTTTTAAATCCTTTGTCGTTTTCAc < 1:5150/229‑1 (MQ=255) gCCAATAACTTGCTCAGTAACGTGGATTGGCACACTAACAATCACCATTCCGGCATCGGCAACA‑ATATCAGCCGCTCGATCCCAGTCATGTTGCTCCAGAATCCGCACCTGATAACCCGAGAGGGTCAGCATCTTCTCGA‑ACAGGCGTCCCATCTGACCGCCACCGCCGACGATAACCACAGGACGCAGTGCCGGACAAAGGGTTTTAAATCCTTTGTCGttttacctg > 2:730351/1‑224 (MQ=255) aTAACTTGCTCAGTAACGTGGATTGGCACACTAACAATCACCATTCCGGCATCGGCAACA‑ATATCAGCCGCTCGATCCCAGTCATGTTGCTCCAGAATCCGCACCTGATAACCCGAGAGGGTCAGCATCTTCTCGA‑ACAGGCGTCCCATCTGACCGCCACCGCCGACGATAACCACCGGACGCAGTGACGGACAAAGTGGTTTAAATCCTTTGCCGTTTTCACTggcg > 1:296778/1‑226 (MQ=255) gCTCAGTAACGTGGATTGGCACACTAACAATCACCATTCCGGCATCGGCAACA‑ATATCAGCCGCTCGATCCCAGTCATGTTGCTCCAGAATCCGCACCTGATAACCCGAGAGGGTCAGCATCTTCTCGA‑ACAGGCGTCCCATCTGACCGCCACCGCCGACGATAACCACCGGACGCAGTGACGGACAAAGTGTTTTAAATCCTTTGTCGTTTTCACTGGAGTAAGAtt > 1:276710/1‑228 (MQ=255) | GCTCCAGAAACCATTGGTATGCTTCCGGTTTACGTCCATCACACCAGACCACAACTTGCTTTGCCAGGCTACCGCTGTCCGGACCGAACATCGGGTGTAGCCCCAGCACCGGACCATCATGCGCCACCAGCATGGCCTGTAATGGCCCATTTTTCACTGATGCCAGATCGACCAGAATAC‑AATCTTTCGGTAAAGGCGGTAATTTGCCAATAACTTGCTCAGTAACGTGGATTGGCACACTAACAATCACCATTCCGGCATCGGCAACA‑ATATCAGCCGCTCGATCCCAGTCATGTTGCTCCAGAATCCGCACCTGATAACCCGAGAGGGTCAGCATCTTCTCGA‑ACAGGCGTCCCATCTGACCGCCACCGCCGACGATAACCACCGGACGCAGTGACGGACAAAGTGTTTTAAATCCTTTGTCGTTTTCACTGGAGTAAGATT > NC_000913/2739383‑2739826 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |