| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,151,563 | A→G | 11.3% | S140S (TCT→TCC) | exbB ← | membrane spanning protein in TonB‑ExbB‑ExbD complex |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,151,563 | 0 | A | G | 11.3% | 190.6 / 2.8 | 78 | S140S (TCT→TCC) | exbB | membrane spanning protein in TonB‑ExbB‑ExbD complex |
| Reads supporting (aligned to +/- strand): ref base A (38/26); new base G (8/2); total (50/28) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.01e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGCTGCAACATCACCCAGCATCGCTTTAAAGCCGCCAATCTGGCGTGCAAATACGTTATAGATAACGACCGCAGGAATCGCTGCCACGAGGCCGATTGCCGTTGCTAACAGAGCTTCTGCGATACCCGGCGCAACGACTGCCAGGTTAGTGGTCTGC‑‑‑‑GTTTGCGCGATACCAATAAAGCTGTTCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACGCTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATGCAGGCTTAAGCTTTTGCTACCAAAATCAGCGGCGATATCGTTGGCCTGGTTTAAGGAAC > NC_000913/3151341‑3151786 | cgcTGCAACATCACCCAGCATCGCTTTAAAGCCGCCAATCTGGCGTGCAAATACGTTATAGATAACGACCGCAGGAATCGCTGCCACGAGGCCGATTGCCGTTGCTAACAGAGCTTCTGCGATACCCGGCGCAACGACTGCCAGGTTCGTGGTCTGC‑‑‑‑GTTTGCGCGATACCAATAAAGCTGTTCATGATGCCCCAACCCGTCCCAAACACACCAACAAACGGAGAAAta > 2:674224/1‑228 (MQ=255) cAACATCACCCAGCATCGCTTTAAAGCCGCCAATCTGGCGTGCAAATACGTTATAGATAACGACCGCAGGAATCGCTGCCACGAGGCCGATTGCCGTTGCTAACAGAGCTTCTGCGATCCCCCGCGCAACGACTGCCAGGTTAGTGGTCTGCGTTTGTTTGCGCGATACCCATAAAGCTGTTCATGATGCCCCAGACCGTACCAAACAAACAAAAAAACGGGGaaaaac > 2:70159/1‑226 (MQ=255) cccAGCATCGCTTTAAAGCCGCCAATCTGGCGTGCAAATACGTTATAGATAACGACCGCAGGAATCGCTGCCACGCGGCCGATTGCCGTTGCTAACAGAGCTTCTGCGATACCCGGCGCAACGACTGCCAGGTTAGTGGTCTGC‑‑‑‑GTTTGCGCGATACCAATAAAGCTGTTCATGTTGCCCCAGCCCGTACCAATCGAACCAACGAACTGGAAAATCCGGCCGACGGtt > 1:719952/1‑228 (MQ=255) aGCATCGCTTTAAAGCCGCCAATCTGGCGTGCAAATACGTTATAGATAACGACCGCAGGAATCGCTGCCACGAGGCCGATTGCCGTTGCTAACAGAGCTTCTGCGATACCCGGCGCAACGACTGCCAGGTTAGTGGTCTGC‑‑‑‑GTTTGCGCGATACCACTAAAGCTGTTCAGGATGCCCCAGACCGTACCAAACAAACAAACGAACGGGGAAACATAGCCGATGGtgtca > 1:396535/1‑224 (MQ=255) cTTTAAAGCCGCCAATCTGGCGTGCAAATACGTTATAGATAACGACCGCAGGAATCGCTGCCACGAGGCCGATTGCCGTTGCTAACAGAGCTTCTGCGATACCCGGCGCAACGACTGCCAGGTTAGTGGTCTGC‑‑‑‑GTTTGCGCGCTCCCAATAAAGCTGTTCATGATGCCCCCGACCGTACCCAACAGACCAACGAAAGGGGAAAACGCCCCCAAGGTTGCCaaaaaaa > 2:312723/1‑222 (MQ=255) cTTTAAAGCCGCCAATCTGGCGAGCAAATACGTTATAGATAACGACCGCAGGAATCGCTGCCACGAGGCCGATTGCCGTTGCTAACAGAGCTTCTGCGATACCCGGCGCAACGACTGCCAGGTTAGTGGTCTGC‑‑‑‑GTTTGCGCGATACCAATAAAGCTGTTCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCaactaac > 1:165652/1‑222 (MQ=255) tttAAAGCCGCCAATCTGGCGTGCAAATACGTTATAGATAACGACCGCAGGAATCGCTGCCACGAGGCCGATTGCCGTTGCTAACAGAGCTTCTGCGATACCCGGCGCAACGACTGCCAGGTTAGTGGTCTGC‑‑‑‑GTTTGCGCGATACCAATAAAGCTGTTCATGATGCCCCAGACCGTACCAAACAGACCAACAAACGGCGAAATCGCGACGCTGGTTGCAAGaagacc > 2:501793/1‑223 (MQ=255) aaGCCGCCAATCTGGCGTGCAAATACGTTATAGATAACGACCGCAGGAATCGCTGCCACGAGGCCGATTGCCGTTGCTAACAGAGCTTCTGCGATACCCGGCGCAACGACTGCCAGGTTAGTGGTCTGC‑‑‑‑GTTTGCGCGATACCAATAAAGCTGTTCATGATGCCCCAGACCGTCCCAAACAGACCAACGACCGGCGAAATTCGTCCGATGGTTGCCCGATAGCAGTCAc > 1:721297/1‑229 (MQ=255) ccAATCTGGCGTGCAAATACGTTATAGATAACGACCGCAGGAATCGCTGCCACGAGGCCGATTGCCGTTGCTAACAGAGCTTCTGCGATACCCGGCGCAACGACTGCCAGGTTAGTGGTCTGC‑‑‑‑GTTTGCGCGATACCAATAAAGCTGTTCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGATAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGc > 1:620528/1‑229 (MQ=255) aTCTGGCGTGCAAATACGTTATAGATAACGACCGCAGGAATCGCTGCCACGAGGCCGATTGCCGTTGCTAACAGAGCTTCTGCGATACCCGGCGCAACGACTGCCAGGTTAGTGGTCTGC‑‑‑‑GTTTGCGCGATACCAATAAAGCTGTTCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCa < 1:560473/229‑1 (MQ=255) aTCTGGCGGGCAAATACGTTATAGATAACGACCGCAGGAATCGCTGCCACGAGGCCGATTGCCGTTGCTAACAGAGCTTCTGCGATACCCGGCGCAACGACTGCCAGGTTAGTGGTCTGC‑‑‑‑GTTTGCGCGATACCAATAAAGCTGTTCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCa < 1:659924/229‑1 (MQ=255) ggcagacAAATAGATTATAGATAAGGACCGAAGGAATCGCTGCCAGGAGGCCGATTGACGTTGCTAACAGAGCTTCTGCGATACCCGGCGCAATGACTGCCAGGTTAGTGGTCTGC‑‑‑‑GTTTGCGCGATACCAATAAAGCTGTTCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCAtt < 1:460257/221‑1 (MQ=255) aaCGACCGCAGGAATCGCTGCCACGAGGCCGATTGCCGTTGCTAACAGAGCTTCTGCGATACCCGGCGCAACGACTGCCAGGTTAGCGGTCAGC‑‑‑‑GCCTGCGCGAAACCAATACAGCTGTGCATAATTCCCCCCACCGAACCAAACAGGCCAACGAACGGCGAAATGCCGCCGTTGGTTACAAGATATCCGTAACTGCGGCCCATTTGACGACCCACTGGGGGGAcaaaa > 2:71933/1‑225 (MQ=255) cGACCGCAGGAATCGCTGCCACGAGGCCGATTGCCGTTGCTAACAGAGCTTCTGCGATACCCGGCGCAACAACTGCCAGGTTAGTGGTCTGC‑‑‑‑GTTTACGCGATACCAATAAAGCTGTTCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGGGAAATCGCGCCGATGGATGCCAAAAACCCGTTACCGAGGCCCATATGACGACCCAAAGCGGCGACCCGACg > 2:323639/1‑229 (MQ=255) gACCGCAGGAATCGCTGCCACGAGGCCGATTGCCGTTGCTAACAGAGCTTCTGCGATACCCGGCGCAACGACTGCCAGGTTAGTGGTCTGC‑‑‑‑GTTTGCGCGATACCAATAAAGCTGTTCATGATGCCCCAGACCGTACCCAACAGACCAACGAACGGAGAAATCCCGCCGAGGGTTGCCAAATAGCCGTTCCCGAGGCCCATTTCTCAACCCACAgcggcccgccaacga > 2:735952/1‑219 (MQ=255) cAGGAATCGCTGCCACGAGGCCGATTGCCGTTGCTAACAGAGCTTCTGCGATACCCGGCGCAACGACTGCCAGGTTAGTGGTCTGC‑‑‑‑GTTTGCGCGATACCCATAAAGCTGTTCATGATGCCCCAGACCGAACCAAACAGACCAACGAACGGAAAAATCGCGCCCATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACCGCCCCGGCCCGAcccacacg > 2:191167/1‑222 (MQ=255) cAGGAATCGCTGCCACGAGGCCGATTGCCGTTGCTAACAGAGCTTCTGCGATACCCGGCGCAACGACTGCCAGGTTAGTGGTCTGC‑‑‑‑GTTTGCGCGATACCAATAACGCTGTTCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGGTGCCAGATAGCCGGTCCCGCGGCCCACTTGACGACCCCCTGCGGCGACCCGACCCCCCac > 2:550163/1‑228 (MQ=255) cAGGAATCGCTGCCACGAGGCCGATTGCCGTTGCTAACAGAGCTTCTGCGATACCCGGCGCAACGACTGCCAGGTTAGTGGTCTGC‑‑‑‑GTTTGCGCGATACCAATAAAGCTGTTCATGATGCCCCAGACCGTACCAAACAAACCAACGAACGGGGAAATCGCGCCGCTGGTTGCCAGATAGCCGTTACCCCGGCCCATTTGACGACCCACTgcgggccccccaccccccaa > 2:723726/1‑213 (MQ=255) accGCTGCCCCGATGCCGATTGCCGTTGCTAACGGGACTTCTGGGATTCCCGGCGCAACGACTGCCAGGTTAGTGGTCTGC‑‑‑‑GTTTGCGCGATACCAAGAAAGCTGTTCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACGCTCCAGACGGa < 1:143989/227‑1 (MQ=255) gCTGCCACGAGGCCGATTGCCGTTGCTAACAGAGCTTCTGCGATACCCGGCGCAACGACTGCCAGGTTAGTGGTCTGCGTTTGTTTGCGCGATACCAATAAAGCTGTTCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACGCTCCAGACg < 1:70159/228‑1 (MQ=255) cGAGGCCGGTTGCCCTTGCTAAAGAAGCTTCTGCGATCCCCGGCGCAACGACTGCCAGGTTAGTGGTCTGC‑‑‑‑GTTTGCGGGATACCAATAAAGCTGTTCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGCCCCGACGCTCCAGACGGAAGCTGGTACg < 2:702422/229‑1 (MQ=255) cGAGGCCGATTGCCGTTGCTAACAGTGCCTCTGGGATACCCGGCGCAACGACTGCCAGGGTAGTGGTCTGC‑‑‑‑GTTTGCGCGATACCAATAAAGCTGTTCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTGACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACGCTCCAGACGGAAGCTGGTACg < 1:90268/229‑1 (MQ=255) gagggcgtgtGCCGTTTCTAACAGGGCTTTTGCGATTCCCGGCGCAACGACTGCCAGGTTAGTGTTCTGC‑‑‑‑GTTTGCGCGATACCAATAAAGCTGTTCATGATGCCCCAGCCCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGTCCCACTGCGGCGACCCGACGCTCCAGACGGAAGCTGGTACGt < 2:186677/220‑1 (MQ=255) ggCCGATTGCCGTTGCTAACAGAGCTTCTGCGATACCCGGCGCAACGACTGCCAGGTTAGTGGTCTGC‑‑‑‑GTTTGCGCGCTACCAATAAAGCTGTTCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCCATGGTTGTCAGATAGCCGTTCCCCCGGCCCATTTGCCGACCCACTACGGCTCACCCACCCTCCAGACGGAACACGGTACGtt > 2:143264/1‑228 (MQ=255) gCTTCAGCGATCCCCGGCGCAACGACGTCCAGGTTAGTGGTCTGC‑‑‑‑GTTTGCGCGATACCAATAAAGCTGTTCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACGCTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGc < 1:314390/229‑1 (MQ=255) cTTCTGCGATACCCGGCGCAACGACTGCCAGGTTAGTGGTCTGC‑‑‑‑GTTTGCGCGCTACCAATACAGCTGTTCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGCGAAATCGCGCCGCTGGTTGCCAGATAGCCGTTACCGCGCCCCATTTGACGCCCCCCCGCGCCGACCCGCCGCTCCATCCGGAACCTGGGACGCTCTTTAATACCTCCGTTATCGTctct > 2:671157/1‑229 (MQ=255) cTTCTGCGATACCCGGCGCAACGACTGCCAGGTTAGTGGTCTGC‑‑‑‑GTTTGCGCGATACCAATAAAGCTGTTCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGCTAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACGCTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCt > 1:410654/1‑229 (MQ=255) ttCTGCGATACCCGGCGCAACGACTGCCAGGTTAGTGGTCTGC‑‑‑‑GTTTGCGCGATACCAATAAAGCTGTTCATGATGCCCCAGACCGTACCAAACAGACCAACGCACGGAGAAATCGCGCCGATGTTTGCCAGAAAGCCGGTACCGCGGCCACTTTGACGACCCACTGCGGCGACCCGACGCTCCAGACGGAAGCTGGGGCGCTCTTTAAAACATCCGtatacgccgcgc > 2:383809/1‑218 (MQ=255) aTACCCGGCGCAACGACTGCCAGGTTAGTGGTCTGC‑‑‑‑GTTTGCGCGATACCAATAAAGCTGTTCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGAAGACCCACTGCGGCGACCCGACCCCCCAACCCGAAGCGGGTAAGTTCTTTATAACCTTCGTTATCGTCCCCGCCTTCt > 2:538426/1‑228 (MQ=255) cccGGCGCAACGACTGCCAGGTTAGTGGTCTGC‑‑‑‑GTTTGCGCGATACCAATAAAGCTGTTCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCCTTTTACGCCCCACTGCGGCGACCCGCCCTCCCAGCCGGAAACTGGTACGTTTTTATATACCTCCGTTTATGTCGCTGCCtctcgacc > 2:314390/1‑222 (MQ=255) ggCGCAACGACTGCCAGGTTAGTGGTCTGC‑‑‑‑GTTTGCGCGATACCAATAAAGCTGTTCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACGCTCCAGACGGAACCTGGTACGTTCTTTAATACCTTCGTTATCATACTGGCCTTCTGAccag > 2:211359/1‑225 (MQ=255) ggCGAAACGACTGCCGGGTTAGTGGTATGC‑‑‑‑GTTTGCGCGATACCAATAAAGCTGTTCATGATGCCCCAGACCGTACCAAACAGGCCAACGAACGGAGAAAGCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACGCTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGtt < 1:211359/229‑1 (MQ=255) cgcAACGACTGCCAGGTTAGTGGTCTGC‑‑‑‑GTTTGCGCGATACCAATAAAGCTGTTCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGGGAAATCGCGCCGATGGCTGCCAGATAGCCGTTACCGCGGCCAATTTGACGAACCACTGCGGCGCCCCGACGCTCCCGACGGAAGACGGTACGTTCTTTAATACTTTCGTTATCGTCGCTGCCTCTTGACAgg > 2:598866/1‑225 (MQ=255) cTGCCCGGTTAGTGGTCTGC‑‑‑‑GTTTGCGCGAGACCAATAAAGCTGTTCAGGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACGCTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCAtt < 1:674225/229‑1 (MQ=255) cTGCCAGGTTAGTGGTCGGG‑‑‑‑GTTTGCGCGATACCAATAAAGCTGTTCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACGCTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCAtt < 1:549616/229‑1 (MQ=255) aGGTTAGTTGTCTGC‑‑‑‑GTTTGCGCGATACCAATAAAGCCGTTCATGCTGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGGCGCTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTgcg < 1:109436/229‑1 (MQ=255) gTGGTCTGC‑‑‑‑GTTTGCGCGATACCAATAAAGCTGTTCAGGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACGCTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCAt < 1:501793/229‑1 (MQ=255) gTGGCCTGC‑‑‑‑GTTTGCGCGATACCAAAAAAGGTGTTCAGGAGGCCCCAGACCGTCCCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACGCTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCa < 2:660206/228‑1 (MQ=255) gggTCTAA‑‑‑‑GTTTGCGCGAGACCAATAAAGCTGTTCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCCCTGCGGCGACCCGACGCTCCAGACGGAAGCTGGACCTTTCTTTAAGCCCTTCGTTATCGTCCCGGCCTTCTCACAGTTCCAGCTCATTcatgccttcagt > 2:588241/2‑218 (MQ=255) gTCTGC‑‑‑‑GTTTGCGCGATACCAATAATGCTGTTCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGCGAACCCACTGCGGCGACCAGACCCCCCCACCGGACGCTGGTACGTTCTTTAATCCCTCCGTTATCGTCGCTGCCTTTCGAAAGTTCACACTCATTCTCGCCTTTATTGa > 2:180049/1‑229 (MQ=255) tGC‑‑‑‑GTTTGCGCGATACCAATAAAGCTGTTCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACAGCGGCCCATTTGACGACCCACTGCGGCGACCCGACACTCCAGACGGAAGCTGGTCCGTTCTTTAATACACTCGTTCTAGGCACTGACTTCCGGCAGTTCCCTCACCTTCTGCGCTTCATTggtga > 2:708884/1‑225 (MQ=255) gC‑‑‑‑GTTTGCGCGATACCAATAAAGCTGTTCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACGCTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGc < 1:476887/227‑1 (MQ=255) aaaaaccgTTCATGATGCCCCAGACCGTCCCAAACAGCCCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTCCCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACGCTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATGCAGGCTTAAGCtttt < 1:30452/222‑1 (MQ=255) aaGCTGTTCATGATGCCCCAGGCCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACGCTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATGCAGGCTTAAGCTTTTg < 1:171735/228‑1 (MQ=255) gCTGTTCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACGCTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGtt > 1:374505/1‑179 (MQ=255) gCTGTTCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACGCTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGGGCAAATGCAGGCTTAAGCTTTTGCt > 1:203389/1‑228 (MQ=255) gTTCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACGCTCCAGACGGACGCTGGTACGTTCTTTAATACCTTCGTTATCGTCCCTGCCTTCTGCAAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATCACGGCTTAAGCTTTTGCTAcaa > 2:155290/1‑227 (MQ=255) gTTCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACGCTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTTAGCAAATGCAGGCTTAAGCTTTTGCTACCa > 1:34410/1‑229 (MQ=255) gTTCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACGCTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATGCAGGCTTAAGCTTTTGCTAcc > 1:168198/1‑228 (MQ=255) gTTCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCCACCCGGCCCTCCAGAAGGCAGCTGGTAAGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACCGTTCCAGATCATTATTGGCTGCATTTGGCAAATGCAGGCTTACGCCTTTGCTACCa > 2:410028/1‑229 (MQ=255) ttCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACGCTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGGCCTTCATTGAGCAAATGCAGGCTTAAGCTTTTGCTTCCaa > 1:17114/1‑229 (MQ=255) ttCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACGCTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATGCAGGCTTAAGCTTTTGCTACCaa > 1:20764/1‑229 (MQ=255) ttCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACGCTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATGCAGGCTTAAGCTTTTGCTACCaa > 1:11610/1‑229 (MQ=255) ttCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGCCCCATTTGACGACCCACTGCGGCGACCCTCCGCTCCAGACGGAAGCTGGGACGTTCTTTTATACCTTCGTTATCGTCCCGCCCTTCTGACAGTACCAGCACATTCTGCCCTCCATTGACCAAAACCAGGGTTAATCGTTTGCACCCaa > 2:417786/1‑229 (MQ=255) cATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACGCTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATGCAGGCTTAAGCTTTTGCTACCaaaa > 1:254821/1‑229 (MQ=255) gatgCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGCCGACCCACTGCGGCGACCCGACGCTCCAGCCGGAACCTGGTACGTTCTTTACTACCTTCGTTTTCGTCGCGGCCTTCTGCCAGTTCCCGCTCATTTCGCGCTTCATTGCGCAAATGCAGCTTTAACCTTTT‑CTCCCaaaaacc > 2:133426/1‑225 (MQ=255) cccAGACCGTACCAAACAGACCAACGAACGGGGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACGCTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTGTCGGCCTTCTGACAGTTCCAGCTCATTCTGTGCTCAATTGAGACAATCCAGGCTTAAGCTTTTGCTACCAAAATCacgga > 2:2864/1‑224 (MQ=255) cccAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACGCTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATGCAGCCTTAAGCTTTTGCTACCACAATCAgcggc > 1:380603/1‑229 (MQ=255) cccAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACGCTCCAGACGGAAGCTGGTACGTTCTTTAACACCTTCGTTATCGTCGCTGCCTTCTGACCGTTCCAGCTCATTCTGCGCTTCATTCAGCAAATGCAGGCTTAAGCTTTTGCTACCAAAATCAccggc > 2:190340/1‑229 (MQ=255) gACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACGCTCCAGACGGAAGCTGGTACGTTCTTTaa < 2:230152/128‑1 (MQ=255) gACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACGCTCCAGACGGAAGCTGGTACGTTCTTTaa > 1:230152/1‑128 (MQ=255) gTACCAAACTGACCAACGAACGGAGAAACCGCGCCGATGGTTGCCAGGTAGCCGTTACCGCGGACCATTTGACGTCCCACTGCGGCGACCCGACGCTCCAGACGGAAGCTGGTACGTTCTTTAATCCCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATGCAGGCTTAAGCTTTTGCTACCAAAATCAGCGGCGATATCGt < 1:323639/229‑1 (MQ=255) tACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACGCTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCCCCTTCTGCGCTTCATTGAGCAAATGCAGGCTTAAGCTTTTGCCACCAAAATCCACGGGGATATCGtg > 2:116613/1‑228 (MQ=255) tACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACGCTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCAGCCTTCTGACAGTTCGAGCTCATTCTCCGCTTCATTGGTCAAATTCAGGCTTAAGCTTTTGCTACCAAAATCAGCCGCGATTACGtt > 1:720176/1‑229 (MQ=255) tACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGATGCCAGATAGCCGTTACCGCGACCCATATGACGACCCACTGCGGCGACCCGACGCCCCCACCGGAAGCAGGTACGTGCTTAACTACCTTCGTTATCGTCCCTGCCTTCTACCAGGTCCAGCCCATTCTACACTTCATTGTGCAAAGGCAGGCTTAAGGTTTGCCTACCACAACAAGCGCGGATATAGtt > 2:154828/1‑229 (MQ=255) aCCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACGCTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATGCAGGCTTAAGCTTTTGCTACCAACATCAGCGGCGATATCGTTg > 1:561918/1‑229 (MQ=255) caaccgcgccAACGCACGGAGAAAGCGCGCCGATTGTTGCCAGATAGCCGTTACCGCGGCCCATGTGACGACCCACTGCGGCGACCCGACGCTCCAGACGGAAGCTGGTACGTTCTTTAATCCCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATGCAGGCTTAAGCTTTTGCTACCAAAATCAGCGGCGATATCGTTGGc < 2:56217/221‑1 (MQ=255) cAAACAGGACAACGAACGGAGAAATCGCGCCGATTGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACGCTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATGCAGGCTTAAGCTTTTGCTACCAAAATCAGCGGCGATATCGTTGGc < 1:143264/229‑1 (MQ=255) cAAACAGACCAACGACCGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCACATTTGACGGCCCACTGCGGCGACCCGACGCTCCAGACGGAAGCTGGTACGTTCTTTAATACCGTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATGCAGGCTTAAGCTTTTGCTACCAAAATCAGCGGCGATATCGTTGGc < 1:417786/229‑1 (MQ=255) cAAACAGACCAACGAACGGAGAACCCGCCCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACGCTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATGCAGGCTTAAGCTTTTGCTACCAAAATCAGCGGCGATATCGTTGGc < 2:203389/229‑1 (MQ=255) aaaaaagccaacggcacgGGGAATTCGCGCAGAGGGGTGCCGGATAGCGCTTACCTCGGCCAATTTGACGACCCACGGCGGCGACCCGCCGCTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCGTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATGCAGGCTTAAGCTTTTGCTACCAAAATCAGCGGCGATATCGTTGGc < 2:69100/214‑1 (MQ=255) aaCAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACGCTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATGCAGGCTTAAGCTTTTGCTACCAAAATCAGCGGCGATATCGTTGGCCt > 1:122778/1‑229 (MQ=255) gccAACGAACGGGGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACGCTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTGCATTGAGCAAATGCAGGCTTAAGCTTTTGCTACCAAAATCAGCGGCGATATCGTTGGCCTGGttt < 1:2864/228‑1 (MQ=255) aCCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACGCTCCAGACGGAAGCTGGTACGTTCTTTaa < 2:657329/113‑1 (MQ=255) aCCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACGCTCCAGACGGAAGCTGGTACGTTCTTTaa > 1:657330/1‑113 (MQ=255) aCCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACGCTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATGCAGGCTTAAGCTTTTGCTACCAAAATCAGCGGCGATATGTTTGGCCTGGtt > 1:588378/1‑228 (MQ=255) aCCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACGCTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCCTTACCGTCGCTGCCTTCTGACCATTCCAGCTCATTTTTCCATTCTTTGCGCCACTGCCACCTTAAGCTTTTGATACCCAAATCAccgcctgttccgttggcgcgggt > 2:378872/1‑208 (MQ=255) aacgGAGAATACCCCCCGGTGGTGCCCCGGTGGCCCTTCCCGCGGCCCATTTGACGCTCCACCGCGGCGACCCGACGCTCCAGGCGGACGCTGGGACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATGCAGGCTTAAGCTTTTGCTACCAAAATCAGCGGCGATATCGTTGGCCTGGTTTAAGGAAc < 2:561917/229‑1 (MQ=255) gagaAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACGCTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATGCAGGCTTAAGCTTTTGCTACCAAAATCAGCGGCGATATCGTTGGCCTGGTTTAAGGAAc < 1:133426/225‑1 (MQ=255) | CGCTGCAACATCACCCAGCATCGCTTTAAAGCCGCCAATCTGGCGTGCAAATACGTTATAGATAACGACCGCAGGAATCGCTGCCACGAGGCCGATTGCCGTTGCTAACAGAGCTTCTGCGATACCCGGCGCAACGACTGCCAGGTTAGTGGTCTGC‑‑‑‑GTTTGCGCGATACCAATAAAGCTGTTCATGATGCCCCAGACCGTACCAAACAGACCAACGAACGGAGAAATCGCGCCGATGGTTGCCAGATAGCCGTTACCGCGGCCCATTTGACGACCCACTGCGGCGACCCGACGCTCCAGACGGAAGCTGGTACGTTCTTTAATACCTTCGTTATCGTCGCTGCCTTCTGACAGTTCCAGCTCATTCTGCGCTTCATTGAGCAAATGCAGGCTTAAGCTTTTGCTACCAAAATCAGCGGCGATATCGTTGGCCTGGTTTAAGGAAC > NC_000913/3151341‑3151786 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |