| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,125,339 | T→G | 16.0% | T491P (ACC→CCC) | priA ← | Primosome factor n' (replication factor Y) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,125,339 | 0 | T | G | 16.0% | 141.1 / 2.6 | 75 | T491P (ACC→CCC) | priA | Primosome factor n' (replication factor Y) |
| Reads supporting (aligned to +/- strand): ref base T (24/34); new base G (7/9); total (32/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AGAAAACAGCGCGCCGTCCACGTCCAGTAATGCAACCAGCGTCACATCCGGGAAATGGTGACCTTTCGCCAGCATTTGTGT‑ACCAATCAAAATCCGCGCGCCGCCGCGATGTACTTCTG‑CCAGTTGCTGTTCCAGCGCCCCTTTGCGGCTGGTGGTATCGCGGTCGATACGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACGGGG‑ACCAGGTGCGTGGAACCGCAGGAAGGGCACTGGCGCGGCACCGGACGCTGACTGTCACAGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCACGGCGGTTAAGAAAGAGAATGACCTGGTTATCAGCCT > NC_000913/4125115‑4125563 | aGAAAACAGCCCGCCGTCCACGTCCAGTAATGCAACCAGCGTCACATCCGGGAAATGGTGACCTTTCGCCAGCATTTGTGT‑TCCAATCAAAATCCGCGCGCCGCCGCGATGTACTTCTG‑CCAGTTGCTGTTCCAGCGCCCCTTTGCGGCTGGTGGTATCGCGGTCGATACGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGcc < 1:595133/228‑1 (MQ=255) aaaaaggagccgggtccctgtccgGTAATGCAACCAGGGTCCCGTCGGGAAAATGGTGACCTTTCGCCAGCATTTGGCT‑ACCAATCAAAACCCGCGCGCCGCCGCGAGGTTCTTCTG‑CCAGTTGCTGTTCCAGCGCCCCTTTGCGGCTGGTGGTATCGCGGTCGATACGTGAAATGGGCGCGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCa < 2:553012/209‑1 (MQ=255) gcgcCGTCCACGTCCAGTAATGCACCCAGCGTCACATCCGGGAAATGGTGCCCTTTTGCCAGCATTTGTGT‑ACCAATCAAAATCCGCGCGCCGCCGCGATGTACTTCTG‑CCAGTTGCTGTTCCAGCGCCCCTTTGCGGCTGGTGGTATCGCGGTCGATACGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACg < 1:603475/228‑1 (MQ=255) cgtccacgtccaGTAATGCAACCAGCGTCACATCCGGGAAATGGTGACCTTTCGCCAGCATTTGTGT‑ACCAATAAAAATCCGCGAGCGGCCGCGATGTACTTCTG‑CCAGTTGCTGTTCCAGCGCCCCTTTGCGGCTGGTGGAATGCCGGTCGTTACCGGAAATGGGCACTCCCGGGCAAAACGGCCGGGGCGCTCGGTCAAGCTGGTGGGCGACCACCCCCACCGGG‑Ac > 2:230901/1‑229 (MQ=255) tccacgtccaGTAATGCAACCAGCGTCACATCCGGGAAATGGTGACCTTTCGCCAGCATTTGTGT‑ACCAATCAAAATCCGCGCGCCGCCGCGATGTACTTCTG‑CCAGTTGCTGTTCCAGCGCCCCTTTGCGGCTGGTGGGATCGCGGTCGATACGAGAAATGGGCACGCCGGGGAACCACGCCGCGGGGGTCTGTTCAAACGGTTCGGGGCCCAGCCCCCCggggcgac > 2:549629/1‑225 (MQ=255) ccccgcccgttatggacaCCAGCGCCCCATCCGGGAAATGGGGACCTTTCGCCAGCATTTGTGT‑ACCAATCAAAATCCGCGCGCCGCGGGGATGTACTTCTG‑CCAGTTGCTGTTCCAGCGCCCCTTTGCGGCTGGTGGTATCGCGGTCGATACGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACGGGG‑ACCAg < 2:696355/212‑1 (MQ=255) cccacgcccgTAATTCAACCACGGCCACAGCCGGGAAAGGGTGCCCTTGTGCCAGCATTTGTGT‑ACCAAGCAAAATCCGCGCGCCGCCGCGATGTACTTCTG‑CCAGTTGCTGTTCCAGCGCCCCTTTGCGGCTGGTGGTATCGCGGTCGATACGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACGGGG‑ACCAg < 2:188604/220‑1 (MQ=255) tGCAACCAGCGTCACATCCGGGAAATGGTGACCTTTCGCCAGCATTTGTGT‑ACCAATCAAAATCCGCGCGCCGCCGCGATGTACTTCTG‑CCAGTTGCTGTTCCAGCGCCCCTTTGCGGCTGGTGGTATCGCGGTCGATACGAGAAATGGGCACGCCGGGGAACAACGGCGCGGGCGTCTGTTCAAGCTGTTCGGGGCCCGGCCCCCCGGGG‑GCACGGTGGGGGGAAccc > 1:314478/1‑228 (MQ=255) gCAACCAGCGTCACATCCGGGAAATGGTGACCTTTCGCCAGCATTTGTGT‑ACCAATCAAAATCCGCGCGCCGCCGCGATGTACTTCTG‑CCAGTTGCTGTTCCAGCGCCCCTTTGCGGCTGGTGGTATCGCGGTCGATACGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCCCGGGG‑ACCAGGTGCGTGGAACCg > 1:117250/1‑228 (MQ=255) cAACCAGCGTCACATCCGGGAAATGGTGACCTTTCGCCAGCATTTGTGT‑ACCAATCAAAATCCGCGCGCCGCCGCGATGTACTTCTG‑CCAGTTGCTGTTCCAGCGCCCCTTTGCGGCTGGTGGTATCGCGGTCGATACGAGAAATGGGCACGCCGGGGGAGAACGGCGCGAGCGTCCGTTCAAGCTGGTCGGTGGCCAACCCCCCGGGG‑GCCAGGGGCGGGGCAccacc > 1:320056/1‑226 (MQ=255) ccAGCGTCACATCCGGGAAATGGTGACCTTTCGCCAGCATTTGTGT‑ACCAATCAAAATCCGCGCGCCGCCGCGATGTACTTCTG‑CCAGTTGCTGTTCCAGCGCCCCTTTGCGGCTGGTGGTATCGCGGTCGATACGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGGCCAGCCCCCCGGGG‑ACAAGGGACGTGGAACCGCAggg > 1:753200/1‑228 (MQ=255) aGCGTCACATCCGGGAAATGGTGACCTTTCGCCAGCATTTGTGT‑ACCAATCAAAATCCGCGCGCCGCCGCGATGTACTTCTG‑CCAGTTGCTGTTCCAGCGCCCCTTTGCGGCTGGTGGAATCGCGGCCGATACGCGAAATGGGCACGCCGGGGAAAAACGGGGCGCGCGTCTTGTTAAGCGTTACGGGGCCCACCCCCACGGGGCACCCGG‑GCGGGGGACCGCacagaa > 2:448306/1‑224 (MQ=255) ccgtccaaTCCGGGAAAGTGTGCCCTTTCTCCAGCATTTGTGG‑CCCAACCAAACCCCGCCGGCGGGCGGGATGTACTGCTG‑CCAGTTGCTGTGCCAGCGCCCCTTTGCGGCGGGGGGTATCGCGGTCGATACGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACGGGG‑ACCAGGTGCGTGGAACCGCAGGa < 2:320056/219‑1 (MQ=255) cGTCACATCCGGGAAATGGTTACCTTTCGCCAGCATTTGTGT‑ACCAATCAAAATCCGCGCGCCGCCGCGATGTACTTCTG‑CCAGTTGCTGTTCCAGCGCCCCTTTGCGGCTGGTGGTATCGCGGTCGATACGAGAAATGGGCACGCCGGGGAACAACGGCCGGAGGGCCGGTTCCAGCTGTTCGGTGCCCACCCCCCCGCGG‑CCCGGGGGCGGGGAAcacccgggaggg > 2:405624/1‑218 (MQ=255) cGTCACATCCGGGAAATGGTGACCTTTCGCCAGCATTTGTGT‑ACCAATCAAAATCCGCGCGCCGCCGCGATGTACTTCTG‑CCAGTTGCTGTTCCAGCGCCCCTTTGCGGCTGGTGGTATCGCGGTCGATACGAGAAATGGGAACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGGGCCCAGCCCCACGGGG‑ACCAGGGGCGGGGAACCGCAGGAAagg > 1:291864/1‑229 (MQ=255) tCACATCCGGGAAATGGTGACCTTTCGCCAGCATTTGTTT‑ACCAATCAAAATCCGCGCGCCGCCGCGATGTACTTCTG‑CCAGTTGCTGTTCCAGCGCCCCTTTGCGGCTGGTGGTATCGCGGGCGATACGAGAAATGGGCACGCCGGGGAACAACGGCGCGGGCGGCTGTTCAAACTGTTCGGTGCCCAGCCCCCCGGGG‑GCCAggggggggggacacgggaaggggc > 2:545400/1‑206 (MQ=255) tCACATCCGGGAAATGGTGACCTTTCGCCAGCATTTGTGT‑ACCAATCAAAATCCGCGCGCCGCCGCGATGTACTTCTG‑CCAGTTGCTGTTCCAGCGCCCCTTTGCGGCTGGTGGTATCGCGGTCGATACGAGAAATGGGCCCGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGGGCCCAGCCCCCCGGGG‑ACCAGGGGCGCGGAACCGCAGGAAGGGc > 1:181454/1‑228 (MQ=255) aaTGGTGGCCTTTCCCCAGCATTTGGGT‑ACCAATCAAAAGCCGCGCGCCGCCGCGATGGACTTCTG‑CCAGTTGCTGTTCCAGCGCCCCTTTGCGGCTGGTGGTATCGCGGTCGATACGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACGGGG‑ACCAGGTGCGTGGAACCGCAGGAAGGGCACTGGCGCGGCAc < 1:549629/229‑1 (MQ=255) tgcgctcttCGCCAGCATTT‑TGTGACAAACCGAAACCCCCGTCCCCCCGGGATGTA‑GTCTGCCCAGTGGTTGTACCAGGGCCCCTGTGCGGCTGGGGGTATCGCGGTCGATGCGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGGTCAAGCTGTTCGGTGACCAGCCCCACGGGG‑ACCAGGTGCGTGGAACCGCAGGAAGGGCACTGGCGCGGCACCTGa < 2:456046/222‑1 (MQ=255) gTGACCTTTCGCCAGCATTTGTGT‑ACCAATCAAAATCCGCGCGCCGCCGCGATGTACTTCTG‑CCAGTTGCTGTTCCAGCGCCCCTTTGCGGCTGGTGGTATCGCGGTCTATACGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACGGGG‑ACCCGGTGCGTGGAACCGCAGGAAGGGCACTGACGCGCGACCgg > 1:665345/1‑228 (MQ=255) aCCTTTCGCCAGCATTTGTGT‑ACCAATCAAAATCCGCGCGCCGCCGCGATGTACTTCTG‑CCAGTTGCTGTTCCAGCGCCCCTTTGCGGCTGGTGGTATCGCGGTCGATACGGCAAATGGGCCCGCCGGGGCACAACGGCCCGAGCGCCTGTTCAAGCTCTTCGGGGCCCACCCCCCCGGGG‑GCCAGGTGCGCTGCACCGCCGGAAGGGCCCT‑GCGCGGGAcccggaccc > 2:113782/1‑222 (MQ=255) ggcatctttttTGG‑ACCAACCAAAAGCCGCGCGCCGCCGCGATGTTCTTCTG‑CCAGTTGCTGTTCCCGGGCCCCTTTGCGGCTGGGGGTATCGCGGTCGATACGAGAAAGGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACGGGG‑ACCAGGTGCGTGGAACCGCAGGAAGGGCACTGGCGCGGCACCGGACGCTGACTGt < 2:659650/222‑1 (MQ=255) ccAATCAAAATCCGCGCGCCGCCGCGATGTACTTCTG‑CCAGTTGCTGTTCCAGCGCCCCTTTGCGGCTGGTGGTATCGCGGTCGATACGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGcc > 2:158943/1‑146 (MQ=255) ccAATCAAAATCCGCGCGCCGCCGCGATGTACTTCTG‑CCAGTTGCTGTTCCAGCGCCCCTTTGCGGCTGGTGGTATCGCGGTCGATACGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGcc < 1:158943/146‑1 (MQ=255) cAATCAAAATCCGCGCGCCGCCGCGATGTACTTCTG‑CCAGTTGCTGTTCCAGCGCCCCTTTGCGGCTGGTGGTATCGCGGTCGATACGAGAAATGGGCACGCCGGGGACCAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACGGGG‑ACCAGGCGCGTGGAACCGCAGGAAGGGCACTGGCCCGGCACCGGCCCCTGCCGGGCCCAGTGGGGGcgcgc > 1:692692/1‑225 (MQ=255) aTCAAAATCCGCGCGCCGCCGCGATGTACTTCTG‑CCAGTTGCTGTTCCAGCGCCCCTTTGCGGCTGGTGGTATCGCGGTCGATACGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGGCCCACCGGG‑GCCCGGGGCGTGGAACCGCAGGCAGGGCAACGGCGCGGCCCCGGCCGCCGAcgtccaccgtcgggggagcgga > 2:705918/1‑208 (MQ=255) aTCAAAATCCGCGCGCCGCCGCGATGTACTTCTG‑CCAGTTGCTGTTCCAGCGCCCCTTTGCGGCTGGTGGTATCGCGGTCGATACGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACg > 1:261685/1‑153 (MQ=255) aTCAAAATCCGCGCGCCGCCGCGATGTACTTCTG‑CCAGTTGCTGTTCCAGCGCCCCTTTGCGGCTGGTGGTATCGCGGTCGATACGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACGGGG‑GCCAGGTGCGTGGAACCGCAGGAAGGGCACCGGCCCGGCACCGGCCGCTGCCCGGCACAGGGGGGGGAccgcc > 2:731227/1‑228 (MQ=255) aTCAAAATCCCCGCGCCGGCGGGAGGGACTTCGT‑GCAGTTGCTGTTCCCGCGCTCCTTTGCGGCTGGTGGTATCGCGGGCGATACGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACGGGG‑ACCAGGTGCGTGGAACCGCAGGAAGGGCACTGGCGCGGCACCGGACGCTGACTGTCACAGTGGTGGCAGCGCa < 2:564170/229‑1 (MQ=255) aaaaTCCGCGCGCCGCCGCGATGTACTTCTG‑CCAGTTGCTGTTCCAGCGCCCCTTTGCGGCTGGTGGTATCGCGGTCGATACGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACGGGG‑ACCAGGTGCGTGGAACCGCAGGAAGGGCACTGGCGCGGCACCGGACGCTGACTGTCACAGTGGTGGCAGCGCAGa > 1:23059/1‑228 (MQ=255) cgcgcCGCCGCGATGTACTTCTG‑CCAGTTGCTGTTCCAGCGCCCCTTTGCGGCTGGTGGTATCGCGGTCGATACGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACGGGG‑CCCAGGTGCGTGGAACCGCAGGAAGGGCACTGGCGCGGCACCGGACGCCGCCTGTCACAGTGGTGGCAGCGCAGCTGGggctgc > 1:522759/1‑229 (MQ=255) gggagttACTTCTG‑CCCGTTGCTGTTCCAGGGGCCCTTGGCGGCTGGTTGTATCGCGGTCGATACGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACGGGG‑ACCAGGTGCGTGGAACCGCAGGAAGGGCACTGGCGCGGCACCGGACGCTGACTGTCACAGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGc < 1:414161/223‑1 (MQ=255) ggtgtgtcTTGTG‑CCGTTTGCGGTGCCAGCGCCCCTTGGGGGGTGGTGGTATCGGGGTCGATACGAGAAATGGGCCCGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACGGGG‑ACCAGGTGCGTGGAACCGCAGGAAGGGCACTGGCGCGGCACCGGACGCTGACTGTCACAGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCa < 2:117250/222‑1 (MQ=255) gggggtctgtggg‑CCGGTTGGTGTTCCGTCGCCCCTTGGCGGCTGGGGGTGTCGCGGTGGTTCCGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACGGGG‑ACCAGGTGCGTGGAACCGCAGGAAGGGCACTGGCGCGGCACCGGACGCTGACTGTCACAGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCa < 2:402258/217‑1 (MQ=255) gcgcCCCTTTGCGGCTGGTGGTATCGCGGTCGATACGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACGGGG‑ACCAGGTGCGTGGAACCGCAGGAAGGGCACTGGCGCGGCACCGGACGCTGACTGTCACAGGGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGGGTAGTAGGGATGGCAACGTGGGcg > 1:259742/1‑228 (MQ=255) ccccTTTGCGGCTGGTGGTATCGCGGTCGATACGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACGGGG‑CCCAGGTGCGTGGAACCGCAGGAAGGGCACTCGCCCGGCCCCGGACGCCGACTCTCACCGGGGGGGCCGCCCGGGTGCGGCTGCGGCGTATGCCGCGTTGTGGAGTGACCTCCACGTGGGCAtt > 2:22113/1‑228 (MQ=255) gtgggCTGGGGGTTCCGCGGGCGAGGAGTGAAATGGGCCCGCCGGGGAACAACGGCGGGGGCGTCTGGTCAAGCTGTGCGGGGCCCAGCCCCACGGGG‑ACCAGGTGCGTGGAACCGCAGGAAGGGCACTGGCGCGGCACCGGACGCTGACTGTCACAGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAAt < 2:663032/226‑1 (MQ=255) gCGGGTGGTGGGTTCGGGGTCGATACGAGAAAGGGCCACGCCGGGGAACATCGGCGCGGGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCGCGGGG‑ACCAGGTGCGTGGAACCGCAGGAAGGGCACTGGCGCGGCCCCGGACGCTGACTGTCACAGTGGTGGCCGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATc < 2:314478/229‑1 (MQ=255) tggtggTATCGCGGTCGATACGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGGGCCCAGCCCCACGGGG‑ACCAGGGGCGTGGAACCGCAGGAAGGGCACCGGCCCGGGCCCGGACGCTGACTGTCCCAGGGGGGGCAGCCCAGATGGGGCGGCCCGTCATGCCGCGTGGAGTAGGGATTGCAACGAGGGCATTTgggcacacagga > 2:14409/1‑219 (MQ=255) ggtggtATCGGGGGCGATACGAGAAATGGGCCCGCCGGGGAACAGCGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACGGGG‑ACCAGGTGCGTGGAACCGCAGGAAGGGCACTGGCGCGGCACCGGACGCTGACTGTCACAGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCca < 1:104844/229‑1 (MQ=255) ggtggtATCGCGTGCGAATCGGAAAACGGTCACGCCGGGGAAAAACGGGGCGTGGGTCTGTTCAAGGTGGTCGGTGCCCAGCCCCCGCGGG‑ACCAGGTGCGTGGAACCGCAGGAAGGGCCCTGGCGCGGCCCCGGACGCTGACTGTCCCAGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCca < 2:205601/229‑1 (MQ=255) gtggtATCGCGGTCGATACGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACGGGG‑ACCAGGTGCGTGGAACCGCAGGAAGGGCACTGGCGCGGCACCGGACGCTGACTGTCACAGTGGTGGCAGCGCAGAGGGTGCTGGGCCTGATGCAGCGGGTGGTGGTGATCGCAACGTGGGCATTCGGCAATCCAGCcac > 1:262276/1‑229 (MQ=255) gtggtAGCGGGGTCGATACGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACGGGG‑ACCAGGTGCGTGGAACCGCAGGAAGGGCACTGGCGCGGCACCGGACGCTGACTGTCACAGTGGGGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCcac < 1:607104/229‑1 (MQ=255) ggggtggcggggtggaggcGAGAAATGGGCACGCCGGGGAACAACGGCGCGGGCGTCTGTTCAAGCTGGTCGGTGCCCAGCCCCACGGGG‑AGCAGGTGCGTGGAACCGCAGGAAGGGCACTGGCGCGGCACCGGACGCTGACTGTCACAGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCcac < 2:243969/211‑1 (MQ=255) tggcggggtggtgaCGGGAAAGGGGCACGGCGGGGAACGAGGGGCGGGGCGGCTGTCCAAGCGGGTCGGTGCCCGGCCCCACGGGG‑ACCAGTTGCGTGGAACCGGAGGAGGGGCATGGGCGGGGCACCGGACGCTGATTGTCACAGTGTTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTTGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGt < 2:254435/215‑1 (MQ=255) ttCGCGGTCGATTCGAGAAAGGGGCACGCCGGGGACCAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACGGGG‑ACCAGGTGCTTGGAACCGCAGGAAGGGCACTGGCGCGGCACCGGACGCTGACTGTCACAGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCg < 2:559222/228‑1 (MQ=255) aTCGCGGTCGATACGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACGGGG‑ACCAGGTGCGTGGAACCGCAGGAAGGGCACTGGCGCGGCACCGGACGCTGACTGTCACAGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTCGTAGCGGTCGCAACGGGGACATTCGGCAATCCAGCCACAGTCg > 1:685374/1‑229 (MQ=255) tgtcggtggttagagtgaaggggCACGGCGGGGAACACCGGCGGGAGGGTTGGTTCAAGCGGGTCGGTGCCCAGCCCCGCGGGG‑AACAGGTGCGTGGAACCGCAGGAAGGGCACTGGCGCGGCTCCGGACGCTGAATGTCACAGTGGTGGCAGCGCAGATGGGGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCg < 2:344628/208‑1 (MQ=255) tgcgggatgATAGGGGAAAGGGGCCCGTCGGGGAACAACGGGGCGAGGGTCGGTTCAAGGTGTTCGGGGCCCAGCCCCCGGGGG‑TCCAGGTGCATGGAACCGCAGGAAGGGCTCGGGCGCGGCACCGGACGCTGACTGTCACAGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCg < 2:80928/220‑1 (MQ=255) gggttcggtgggagaCAGGGGCCCGCGGGGGGACACGGGGGCGGGCCTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACGGGG‑ACCGGGTGCGTGGAACCGCAGGAAGGGCACTGGCGCGGCACCGGACGCTGACTGTCACAGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTgg < 2:291864/218‑1 (MQ=255) gTCGATACGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACGGGG‑ACCAGGTGCGTGGAACCGCAGGAAGGGCACTGGCGCGGCACCGGCCGCTGACTGTCACAGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCCGCGTGTCGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGcccc > 1:243969/1‑216 (MQ=255) gTCGATACGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACGGGG‑ACCAGGTGCGTGGAACCGCAGGAAGGGCACTGGCGCGGCACCGGACGCTGACTGTCACAGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGCGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGGGGcac > 1:503660/1‑229 (MQ=255) aTGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACGGGG‑ACCAGGTGCGTGGAACCGCAGGAAGGGCACTGGCGCGGCACCGGACGCTGACTGGCACAGTGGGGGCGGCGCAGATGGTGCGGCGCCTGAGGCAGCGTGTAGTAGGGATCGCAACGAGGGCATTCGGCAATCCAGCCACAGTGGTGGCCcagcagagagggcg > 2:723258/1‑221 (MQ=255) gtgCACGCCGGGGAACAACGGCGCGAGCGTCTGGTCAAGCTGTTCGGTGCCCAGCCCCACGGGG‑ACCAGGTGCGTGGAACCGCAGGAAGGGCACTGGCGCGGCACCGGACGCTGACTGTCACAGTGGTGGCAGCGCAGATGGTGCTGCGCCTAATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCa < 1:450920/227‑1 (MQ=255) cGCCGGGGAACAGAGGCGTGAGTGTCGGTTAAAGCTGTTCGGTGCCCAGCCCCACGGGG‑ACCAGGTGCGTGGAACCGCAGGAAGGGCACTGGCGCGGCACCGGACGCTGACTGTCACAGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGc < 1:456108/228‑1 (MQ=255) cGGGGAACAGCGGGGCGAGCTTCTGTTGAGGTTGTGCGGGGCCCAGCCCCACGGGG‑ACCAGGTGCGTGGAACCGCAGGAAGGGCACTGGCGCGGCACCGGACGCTGACTGTCACAGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCAcg < 1:571936/229‑1 (MQ=255) ggAACCAGGGCGCGGGCGTCTGTTCAGGCGGTTCGGGGCCCAGCCCCACGGGG‑ACCAGGTGCGTGGAACCGGAGGAAGGGCACTGGCGCGGCACCGGACGCTGACTGTCACAGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCAcggc < 2:262276/228‑1 (MQ=255) acgagggcggcgagggttGTTCAAGCTGTTCGGTGCCCAGTCCTAGGGGG‑CCCAGGGGGGGGGAACCGCAGGAAGTGCAGTGGCGCGGGACCGGACGGTGACTGTCACAGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCACGGCGGtt < 1:189502/212‑1 (MQ=255) acgacGGCGCGGGGGTGTGTTCAAGCTGGTCGGGGCCCAGCCCCACGGGG‑CACAGGGGCGTGGAACCGCAGGAAGGGCACTGGCGCGGCACCGGACGCTGACTGTCACAGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCACGGCGGtt < 2:23059/226‑1 (MQ=255) cGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACGGGG‑ACCAGGTGCGTGGAACCGCAGGAAGGGCACTGGCGCGGCACCGGACGCTGACTGTCACAGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCACGGCGGTTtag > 1:115100/1‑228 (MQ=255) cGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACGGGG‑ACCAGGTGCGTGGAACCGCAGGAAGGGCACTGGCGCGGCACCGGACGCTGACTGTCACAGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGGGATCGCAACGTGGGCATTCGGCAATCCAGCCCCAGTCGGTGCACAGCGGTGCAGGGCCAAACCAAAGGCGGGTcaga > 2:27380/1‑229 (MQ=255) cGGCGAGGGCGTGTGGTCAGGTAGTGCGGGCCCCAGCCCCCGGGGG‑ACCAGGTGCGTGGAACCGCAGTAAGGGCACTGGGGCGGCACCGGACGCTGACTGTCCCAGTGGTGGGAGCGCAGGTGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCACGGCGGTTaaga < 2:181129/229‑1 (MQ=255) cgcgAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACGGGG‑ACCAGGTGCGTGGAACCGCAGGAAGGGCACTGGCGCGGCACCGGACGCTGACTGTCACAGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACCGCCGTGGCACAGCAGTGCAGGCGCAAAGCAAATGCGGTTtagg > 1:539431/1‑225 (MQ=255) gAGCGTCTGTTCAAGGTGTTCGGTGCCCAGCCCCAGGGGT‑ACCAGGTGCGTGGAACCGCAGGAAGGGCACTGGCGCGGCACCGGACGCTGACGGTCACAGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCACGGCGGTTAAGAAAgaga < 1:507436/229‑1 (MQ=255) agtggttGTTCAAAGTGTTGGGGGCCCGGCCCCACGGGG‑ACCAGGTGCGTGGAACCGCAGTAAGGGCACGGGCGCGGCCCCGGACGCTGACTGTCACAGGGGTGGCGGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCACGGCGGTTAAGAAAGAGaa < 2:504908/223‑1 (MQ=255) gCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACGGGG‑ACCAGGTGCGTGGAACCGCAGGAAGGGCACTGGCGCGGCACCGGACGCTGACTGTCACAGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCACCGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCACGGCGGGTAAGAAAAAGaa > 1:183811/1‑228 (MQ=255) tgtggtcaatgtGTTCGGTGCCCCGCCCCCCGGGG‑CCCAGGTGCGTGGAACCGCGGGAAGGGCCCTGGCGCGGCACCGGACGCTGACTGTCCCAGTGGTGGCAGCGCAGATGGTGCGGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCACGGCGGTTAAGAAAGAGAATGAc < 2:82450/218‑1 (MQ=255) tCTGTTCAATCTGTTCGGTGCCCAGCCCCACGGGG‑ACCAGGTGCGTGGAACCGAAGGAAGGGCACTGGCGCGGCACCGGACGCTGACTGTCACAGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCACGGCGGTTAAGAAAGAGAATGAc < 1:547545/229‑1 (MQ=255) tCTGTTCAAGCTGGTCGGTGCCCAGCCCCACGGGG‑ACCAGGTGCGTGGAACCGCAGGAAGGGCACTGGCGCGGCACCGGACGCTGACTGTCACAGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCACGGCGGTTAAGAAAGAGAATGAc < 1:545400/229‑1 (MQ=255) gTTCAAGGTGTTCGGGCCCCAGCCCCCCGGGG‑ACCAGGTGCGTGGAACCGCAGGAAGGGCAATGGCGCGGCACCGGACGGTGACTGTCACAGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCACGGCGGTTAAGAAAGAGAATGACCt < 1:705434/228‑1 (MQ=255) gcgtgtCGGTGCCCAGCCCCACGGGG‑ACCAGGTGCGTGGAACCGCAGGAAGGGCACTGGCGCGGCACCGGACGCTGACTGTCACAGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCACGGCGGTTAAGAAAGAGAATGACCTGGTTAt < 1:127534/223‑1 (MQ=255) ggtCGGGGCCCAGCCCCACGGGG‑ACCAGGTGCGTGGAACCGCAGGAAGGGCACTGGGTCGGCACCGGACGCTGACTGTCACAGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCTGCCTCGGTCGTGGCACAGCAGTGCAGGCGCAAAGCCACGGCGGTTAAGAAAGAGAATGACCTGGTTATCAGc < 1:113342/227‑1 (MQ=255) gTTCGGTGCCCGGCCCCCGGGGG‑ACCCGTGGCGTGGAACGGCAGGAAGGGCACTGGGGGGGCACCGGACGCTGGATGTCCCAGGGGTGGCAGCGCAGATGGTGCTGCCCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCACGGCGGTTAAGAAAGAGAATGACCTGGTTATCAGc < 2:170159/229‑1 (MQ=255) gTTCGGTGCCCAGCCCCACGGGG‑ACCAGGTGCGTGGAACCGCAGGAAGGGCACTGGCGCGGCACCGGACGCTGACTGTCACAGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCACGGCGGTTAAGAAAGAGAATGACCTGGTTATCAGc < 1:405624/229‑1 (MQ=255) cGGTGCCCAGGCCCAAGGGG‑CACAGGGGCGTGGAACCGCAGGAAGGGCACTGGCGCGGCACCGGACGCTGACGGTCACAGTGGTGGCAGCGCAGATGGTGCTGCGACTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCACGGCGGTTAAGAAAGAGAATGACCTGGTTATCAGCCt < 1:731228/228‑1 (MQ=255) | AGAAAACAGCGCGCCGTCCACGTCCAGTAATGCAACCAGCGTCACATCCGGGAAATGGTGACCTTTCGCCAGCATTTGTGT‑ACCAATCAAAATCCGCGCGCCGCCGCGATGTACTTCTG‑CCAGTTGCTGTTCCAGCGCCCCTTTGCGGCTGGTGGTATCGCGGTCGATACGAGAAATGGGCACGCCGGGGAACAACGGCGCGAGCGTCTGTTCAAGCTGTTCGGTGCCCAGCCCCACGGGG‑ACCAGGTGCGTGGAACCGCAGGAAGGGCACTGGCGCGGCACCGGACGCTGACTGTCACAGTGGTGGCAGCGCAGATGGTGCTGCGCCTGATGCAGCGTGTAGTAGTGATCGCAACGTGGGCATTCGGCAATCCAGCCACAGTCGTGGCACAGCAGTGCAGGCGCAAAGCCACGGCGGTTAAGAAAGAGAATGACCTGGTTATCAGCCT > NC_000913/4125115‑4125563 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |