| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1979489 | 2 (0.050) | 66 (1.570) | 36/284 | 0.1 | 97.1% | intergenic (‑274/‑264) | insA/uspC | IS1 repressor TnpA/universal stress protein |
| ? | NC_000913 | = 2290111 | NA (NA) | intergenic (‑32/+1) | insH1/yejO | IS5 transposase and trans‑activator/pseudogene, autotransporter outer membrane homology,putative transport, Not classified, putative ATP‑binding component of a transport system | |||||
Only 100 of 126 total aligned reads displayed.
AAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGTGATTGATT > NC_000913/1979347‑1979631 | ggataccgccgtaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa > 2:497580‑M1/140‑143 (MQ=255)ggataacgccttaaatggcgcagaaacggtcgaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa > 1:88099‑M1/140‑143 (MQ=255)ggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa > 2:110171‑M1/140‑143 (MQ=255) ataacgccttaaatggcgaagaaacggtgtaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAtt > 1:22886‑M1/138‑143 (MQ=255) accacttaaaacacgaagaaacgggctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTaaa > 1:192942‑M1/135‑143 (MQ=255) gccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATa < 1:48184‑M1/11‑1 (MQ=255) taataatcGAAATGGGACGTTGCGCACAGTCAAAATAACTCACCGTAAATACTCATCTGCTATCAATCTTCGCTTCCACCCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaa < 1:614863‑M1/142‑13 (MQ=255) taatCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacac > 1:437261‑M1/1‑128 (MQ=255) taatCGAAAGGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaa < 1:306741‑M1/143‑16 (MQ=255) gAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTGTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagacac > 2:303634‑M1/1‑123 (MQ=255) agaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTCATTAAATACACAGAAAGGcaac < 2:717887‑M1/25‑1 (MQ=255) gaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGcaaca < 1:233428‑M1/26‑1 (MQ=255) aaTGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctg > 2:256292‑M1/1‑121 (MQ=255) ggtctaactaggctgatgcagggcatgtacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCaa > 2:628651‑M1/113‑143 (MQ=255) ggtctaaataggctaattcaaggcatttacgggagaaaaaatccgctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCaa > 2:22917‑M1/113‑143 (MQ=255) gTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgaga < 1:394434‑M1/143‑31 (MQ=255) tGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAACAATCACTTTCATGCAATACCAGATAAGCTATTGTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatc < 1:695448‑M1/143‑33 (MQ=255) tGCGCACAGTCAAAAGAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatc < 1:641698‑M1/143‑33 (MQ=255) aggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACttaatgtt > 1:621902‑M1/104‑143 (MQ=255) caGTCAAAATACCTCACCGTAAATAATCATCTGCTATAAATAATCACGTTCATGCAATACCAGATAAGCTATTGTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgttt < 2:193319‑M1/143‑39 (MQ=255) caGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgttt < 2:560903‑M1/143‑39 (MQ=255) ctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACttaatgttaat < 1:517270‑M1/43‑1 (MQ=255) tgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACttaatgttaatg < 1:10652‑M1/44‑1 (MQ=255) tCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaagaagtccctgatatgagatcatgtttgtc > 1:693938‑M1/1‑102 (MQ=255) tCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTGAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtc > 1:678330‑M1/1‑102 (MQ=255) ttcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGaaa < 1:590199‑M1/47‑1 (MQ=255) aaaTAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatc > 1:709272‑M1/1‑99 (MQ=255) aTAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctg < 2:323827‑M1/143‑47 (MQ=255) aggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAGGAAAGGCAACAATCAACTTAATGTTAATGAAATGtt > 1:499530‑M1/93‑143 (MQ=255) cacTCACCGTAAATAATCAGCTGCTATAAATAAGCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgga < 2:112783‑M1/142‑49 (MQ=255) cccacCGTAAATAATCATCTGCTATAAATAATCCCTTTCCTGCAATACCAGATAAGCTATTTTTAAACAGACACTTCCCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagc < 2:311515‑M1/141‑51 (MQ=255) atttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCTTCAATCAACTTAATGTTAATGAAATGTTTTAc > 2:89442‑M1/89‑143 (MQ=255) aatCATCTGCTATAAACAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggg < 1:279098‑M1/143‑63 (MQ=255) atcatcTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggcgccatagaccagggt > 1:129378‑M1/1‑80 (MQ=255) tcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGt > 2:326424‑M1/72‑143 (MQ=255) cTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAtgaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatc < 2:366726‑M1/143‑69 (MQ=255) tcatataaatAATCACTTTCACGCAATACCACATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatca < 1:490743‑M1/140‑70 (MQ=255) tGCTATAAATAATCACTTTCATGCAATACCCGATCAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaagatgcgaacaagtccccnatctgagatcatgtttgccatctgcagccatagcacatggtccacca > 2:67943‑M1/1‑74 (MQ=255) cggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGtt > 1:64853‑M1/71‑143 (MQ=255) tataAATAGTCCCTTTCTTGCAATACCAGATAAGGTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccacagaacagggttcatcatga < 2:55053‑M1/143‑73 (MQ=255) tataAATAATCACTTTCATTCAATACCAGATAAGCTATTGTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatga < 2:383331‑M1/143‑73 (MQ=255) ctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTATATATATATTAACCACTTGATTaa < 2:346539‑M1/76‑1 (MQ=255) tcaaacctgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAAt > 1:292215‑M1/67‑143 (MQ=255) tcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAAt < 2:297945‑M1/77‑1 (MQ=255) aaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcacctcccCTAATTAAATACAAAGAAAGGCACCAATCAACATAATGTTACTGAAATGTTTTACATATAATAACCACTTGTTTAATGc < 2:4242‑M1/79‑1 (MQ=255) ataatCACTTTCATGCAACACCAGATAAGCTATTTTCAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcat < 1:410067‑M1/143‑78 (MQ=255) acgtgcagcaacgacatgactgaggcagctgagaagactttccccgcttagtagctccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAAGGAAATGTTTTACATATATTAACCACTTGTTTAATGCgg > 2:328001‑M1/63‑143 (MQ=255) cACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgcacaagtccctgatatgagatcatgtttgtcatctggcgccatagaacagcgtctctcatgagccatgcact > 1:608550‑M1/1‑61 (MQ=255) agaaatgaaatgactgagtcagccgagaagaatttccccgcttattctcaccttccCTCGTTCAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATc > 2:547671‑M1/57‑143 (MQ=255) agaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATc < 1:692464‑M1/87‑1 (MQ=255) gaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCa > 1:520716‑M1/56‑143 (MQ=255) tttCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttac > 1:284752‑M1/1‑58 (MQ=255) ttccatgCAATACCAGATAATCTATTTTTAACCATACACTTCCCGCACAACAAACTAAgtaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagcgttcatcatgagtcatcaacttac < 2:383743‑M1/140‑86 (MQ=255) atgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACACAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTACCCACTCGTTCAATGCGGCGTCTCAGTa < 1:300102‑M1/91‑1 (MQ=255) tgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTac < 1:468481‑M1/92‑1 (MQ=255) gaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGTCAACAATCAACTTAATGTTAATGAGATGTTTTACAGATATTAACCACTTGTTTAATGCGGAGAATCAGTaca > 1:554853‑M1/51‑143 (MQ=255) aTGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttc < 1:506178‑M1/143‑90 (MQ=255) cAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgcc < 1:213118‑M1/143‑93 (MQ=255) tACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgac < 1:389973‑M1/143‑96 (MQ=255) agagtcagccgagaagaattgccccgcttgttcgcaccttccCTAATGAATGACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTc > 2:288621‑M1/43‑143 (MQ=255) tAAGCTATTTTTAAACAGACACTTACCGCACACCAAACCAAggaatgtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaat < 1:134004‑M1/143‑103 (MQ=255) gagaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAAGCAACAATCAACTTAATGTTAATGAAATGGCTCACATATATTAACCACTTCTTTAATGCGCAGAATCAGTACCCTATTTCCTTAcaatcac < 1:271119‑M1/111‑4 (MQ=255) agaagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACa > 1:138914‑M1/32‑143 (MQ=255) aagaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACAtt < 2:527038‑M1/114‑1 (MQ=255) aagaagttccccgcttattcgcaccttctCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACAtt > 2:460243‑M1/30‑143 (MQ=255) gaatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTg > 2:224022‑M1/28‑143 (MQ=255) aatttccccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGa < 1:280220‑M1/117‑1 (MQ=255) aCAGACACTTACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagagaattcagcagtaagcgc > 1:658446‑M1/1‑27 (MQ=255) agtaacgtgaccggacagcAAGCTAAggaaggtgcgaacaagtcgcggatatgagatcatgttggtcagctggagccatagaagagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgcc < 2:716599‑M1/134‑118 (MQ=255) cccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATtat < 1:373321‑M1/123‑1 (MQ=255) cccgcttattcgcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATtat < 1:265589‑M1/123‑1 (MQ=255) tACCGCACAACAAACTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagcacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagacc > 1:204249‑M1/1‑18 (MQ=255) gcaccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGACCACCgg < 1:476651‑M1/134‑1 (MQ=255) caccttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCggg < 1:447249‑M1/135‑1 (MQ=255) accttccCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAAGCAGTAATATCTTCACATAGAATTACATTTAAAATTATATGATCCCcgggc < 2:150763‑M1/136‑2 (MQ=255) aagaaactaAagaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaaga < 2:479816‑M1/140‑134 (MQ=255) aaCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtcagcgccgtcagaccagaaaagagatg > 2:91439‑M1/1‑6 (MQ=255) cCTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGTGAtt > 1:106953‑M1/2‑143 (MQ=255) aCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacaggggtcatcatgagtcatcaacttaccttcgccgacagtgaattcagcaggaagcgccgtcagaccagcaaagagagca > 2:578465‑M1/1‑5 (MQ=255) cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcctcctgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagatttt < 1:654505‑M1/143‑140 (MQ=255) cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagatttt > 1:571464‑M1/1‑4 (MQ=255) cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagatttt > 1:372336‑M1/1‑4 (MQ=255) cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgcagacagggaattcagcactcaccgtcgtgacagcagaaaagagatttt > 1:270233‑M1/1‑4 (MQ=255) cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggatcatcctgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagcaaagagatttt > 1:678397‑M1/1‑4 (MQ=255) cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggatcatcatgagtcatcaacttaccttcgataaacgcgaataccgcagtaagcgccgtcagaccggaaacgagatata > 2:80806‑M1/1‑4 (MQ=255) cTAAggaaggtgcgaacaagtccctgagatgagagcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagatttt < 1:93861‑M1/143‑140 (MQ=255) cTAAgcaagctgcgaacaagtccctgctatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagatttt < 1:343161‑M1/143‑140 (MQ=255) tAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaggcgccgtcagcccagaaaagagatgttc > 2:541002‑M1/1‑3 (MQ=255) tAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttc < 1:234477‑M1/143‑141 (MQ=255) tAAggaaggtgcgaacaaatccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagcaaaaagattttc > 2:283707‑M1/1‑3 (MQ=255) tAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTAAAATTACATTTGAAATTATATGATCACCGGGAGtgattga > 2:151878/1‑143 (MQ=255) aagtaaggggagaacaagtccctgatatgagatcatgtttgtcatctggagctatagaacagggttcagcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttct < 2:691564‑M1/143‑142 (MQ=255) aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttct > 2:266008‑M1/1‑2 (MQ=255) aggcaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttctt < 1:41856‑M1/143‑143 (MQ=255) aggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagacaagagattttctt > 1:477056‑M1/1‑1 (MQ=255) aggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttctt > 1:361205‑M1/1‑1 (MQ=255) aggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttctt < 1:428379‑M1/143‑143 (MQ=255) aggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttctt < 1:560808‑M1/143‑143 (MQ=255) aggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttctt < 1:641640‑M1/143‑143 (MQ=255) aTTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGTgattgatt < 2:574183/143‑1 (MQ=255) | AAAATGAAACAGGAATAATCGAAATGGGATGTTGCGCACAGTCAAAATAACTCACCGTAAATAATCATCTGCTATAAATAATCACTTTCATGCAATACCAGATAAGCTATTTTTAAACAGACACTTACCGCACAACAAACTAATTAAATACAAAGAAAGGCAACAATCAACTTAATGTTAATGAAATGTTTTACATATATTAACCACTTGTTTAATGCGGAGAATCAGTACACTATTTTCTTATAATTACATTTGAAATTATATGATCACCGGGAGTGATTGATT > NC_000913/1979347‑1979631 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |