| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,550,536 | Δ1 bp | 5.4% | coding (8/900 nt) | yfeX ← | porphyrinogen oxidase, cytoplasmic |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,550,536 | 0 | T | . | 5.4% | 224.5 / 3.1 | 73 | coding (8/900 nt) | yfeX | porphyrinogen oxidase, cytoplasmic |
| Reads supporting (aligned to +/- strand): ref base T (31/37); new base . (2/2); total (34/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.89e-01 | |||||||||||
ATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGCCGCCAGATAATTTTACTGACTTTCCAGTTTTTCAGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTT > NC_000913/2550310‑2550748 | atgttgcAGCTCTTCCGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑g < 2:327816/222‑1 (MQ=255)acctttcctccctcctGCCCCACCGCCGCCGCGCAGAGCGCGCCAGGGGTTTTTCCCAAAAGCAACCCCCGGTCCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCCGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑g < 1:575773/214‑1 (MQ=255) ttCAGCTCTTCCGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGAc < 2:441541/228‑1 (MQ=255) cttctGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTtc < 2:87474/228‑1 (MQ=255) tctGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCCCTCTAAACCT‑GAGACATTGTtcct > 2:556133/1‑228 (MQ=255) cagCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTAACAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTtcctc < 2:274217/226‑1 (MQ=255) ccAACGCCGCCGCTCAGAGCGGTCCAGGTGTTGGTACCAAAGGCAACCAGCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGaa < 2:446649/228‑1 (MQ=255) ccAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCCCCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGaa < 2:232220/228‑1 (MQ=255) ccAACGCCCCCGCTCAGGGCGCGCCAGGTTTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGaa < 2:575917/228‑1 (MQ=255) ccAACCCCTCCGCGCAGATCTCGCCAGGTTTCGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAGGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGaa < 2:668014/228‑1 (MQ=255) aCGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGCCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAaat > 2:298204/1‑228 (MQ=255) cccaccggccgggcggcgcGAGGTGTTTTTACCAAAGGCTACCCACGACCCAAGATGCGCGTCCGGGAATTTCCCTTCAAAAGTTGCCAGGTCGTCGGCAAATGTTTTACTGGCCGCCCGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAaataa < 1:318076/213‑1 (MQ=255) cgggcgagcCGGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACg < 2:248930/225‑1 (MQ=255) agggggcgcCGGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAGCCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACg < 1:429482/223‑1 (MQ=255) agCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCCCGCGGCAATGTTCTGGCAAAATGCCACCCTGAACCC‑GAGCCATTTTTCCTCCTGAAAATAAAAATGcccccca > 1:387333/1‑223 (MQ=255) agCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATACCCGCGCGGCAATTTTCTGGCAAAATGCCACTCTGAACC‑‑CAGACCTTGTTCCCCCTGAAAATATAAATTCCAcccca > 1:591206/1‑224 (MQ=255) agCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTAACGTTGGCTTCGATCCAAATCGCCCCGCGGCAATGTTCTGGCAACAGGCCACCCTGAACC‑‑GAGACATTGTTCCCCCTGAAAATAATAATGCCCCGCaa > 1:169428/1‑228 (MQ=255) acgcCAGGTGTTGGTACCAAAGGCAACCAACGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTTGCGGCAAATGTTTTACGGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATc < 2:405942/227‑1 (MQ=255) gcCAGGTTTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCg < 2:480227/228‑1 (MQ=255) gttgttACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTGCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCa < 2:582189/226‑1 (MQ=255) gttACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCAttgtt > 2:115224/1‑228 (MQ=255) gttACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAAGCCCACCCAATCCGTGGCAttgtt > 2:460874/1‑228 (MQ=255) ttACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCAttgtt < 2:670604/227‑1 (MQ=255) ccAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGt > 1:39594/1‑215 (MQ=255) cAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTg < 2:39594/215‑1 (MQ=255) aaCCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTAtttt > 2:274622/1‑228 (MQ=255) accaccGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGGGGCATGTTTGAGCGCTCtttt > 2:136695/1‑227 (MQ=255) cACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAACTGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGCAATGGTTGAGCGCTATTTTACGTGgtt > 2:334352/1‑228 (MQ=255) ccGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACCCTGAACCT‑GAGACATTGTTCCTCCTGAAAATATTAATGCCACGCAATCCGTGCCATTTTTGAGCGCTATTTTACGTGTTTTTTAGCGCAGGCGGt > 2:691006/1‑228 (MQ=255) ggAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGTCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAACTAATAATGCCACGCAATCCGTGGAATGGTTTCGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGtgtg > 2:330586/1‑228 (MQ=255) gtgtttaaggtacagtGTTTTCCTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCAAGTTGGCTGCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAAcgccg < 2:680952/212‑1 (MQ=255) cAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAAcgccgc < 2:387333/228‑1 (MQ=255) gTTTGGCGGCAAATGTTTTACGGGCCGTCCGCAGGGCGTCAACTTCCCCTTTCCCGTTGGCCTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGCCGCCa < 2:680423/228‑1 (MQ=255) tttGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGCCATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGGTTTTTCAACGGCAAATTaaaccccccaa > 1:45652/1‑219 (MQ=255) ttGTCCGTAAAGTTTTTTCCGGCCGCACGCGGGGGGTGAACTTCCCCGTTCCCGTTGGCTCCGGACCAAATCGCCGCGCGGCAATGTGCTGGCAAAATGCCCCTCTGATCCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGCCGCCAGa < 1:361278/228‑1 (MQ=255) ttGGCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGGTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGCCGCCAGa < 2:266132/228‑1 (MQ=255) cGGCAAATTTTTTACTGGCCGCACGCGGGGCGCCAACTTCCCCTTGCACTGTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGCCGCCAGATa < 1:115224/226‑1 (MQ=255) ggCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTCTTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGCCGCCGGATAAt > 2:427200/1‑227 (MQ=255) aaTGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GCGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGGGTTTTTTCGGGGCGGCGGTTTGTTCGGAGGCAAATTAACGCCCCCAGATAAttttcc > 2:502971/1‑226 (MQ=255) gTTTTGCTGGGCGCACGCAGGGCGTCAAATGCCCCTTGCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGCCGCCAGATAATTTTACTGa < 2:563848/228‑1 (MQ=255) gCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTTGCTTCGATCCAAATCGCCGCGCGGCACTGTTCTTGCCAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCACTCCGTGGCATTGTTGAGCGCTCTTTTCAGTGTTTTTTACCGGCGGGTGTTTGTTTCGGCGCAATATTACCCCGCACGTTCATTTTACTGACTTTcgctc > 1:330735/1‑224 (MQ=255) gCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGCCCCCAGATAATTTTACTGACTTTCCAGt > 2:154722/1‑228 (MQ=255) ccGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAACTAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGCCGGCGGTTTGTTCAGCCTCAAATTAACGCCTCCCGATAAtttctttctcttttatac > 1:680952/1‑212 (MQ=255) ccGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGCCGCCAGATAATTTTACTGACTTTCCAGt > 2:228635/1‑227 (MQ=255) cgcacgcgGGGCGTCAAGTTCCCCGTTCACCTTGGCTTCGAACCAAATCCGCGCGGGGCAATGGTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGGGGCATTGTTGAGCGCTATTTGACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGACGCCAGAGAATTTTACTGACGTTCCAGttt < 1:671523/228‑1 (MQ=255) cgcacgcaGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GCGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCCTTGTTTAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGGCGCAAATTAACGCCGCCAGATAATTTTTTTGAGTTTCCCGt > 1:634605/1‑226 (MQ=255) gggCGTCCACTTCCCCTTTCACGTTGGCTTAGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GACAAATTGTTACTCCTGCAACTAATAATGCGTCGCAATCCGTGGCTTTGTTGAGGGCTATTTTACGTGTTTTTTCGCGGCGGCGGGTTTTTCATACGCAAATTAAACCCTCCCTACAATATTCCTGGCTTTCCTGtttttttaggg > 1:592826/1‑222 (MQ=255) gggCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGCCGCCAGATAATTTTACTGACTTTCCAGGTTTTCAGGGt > 2:117647/1‑228 (MQ=255) gtggTCAATTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGGGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGGCATTGTTCCTGCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGCCGCCAGATAATTTTACTGACTTTCCAGTTTTTCAGGGTa < 1:274622/225‑1 (MQ=255) ggCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGAAAATTAACGCCCCCCAATAATTTTACTGGCTTTCCAGGTTTTAAgggaa > 1:446195/1‑226 (MQ=255) aaCTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGCTTGTTCAGACGCAAATTAACGCCGCCAGATATTTTTACTGACTTTCCAGTTTTTCAGGGAATCggc > 2:602146/1‑225 (MQ=255) aCTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACC‑‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGCCGCCAGATAATTTTACTGACTTTCCAGTTTTTCAGGGTATCGTCCGa < 2:591206/228‑1 (MQ=255) aCTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACC‑‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGCCGCCAGATAATTTTACTGACTTTCCAGTTTTTCAGGGTATCGTCCGa < 2:169428/228‑1 (MQ=255) ttCCCCTTGCACGTTGGCTTCGATCCAAATCGCCGCGCCGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGCCGCCAGATAATTTTACTGACTTTCCAGTTTTTCAGGGTATCGTCCGa < 2:676054/227‑1 (MQ=255) tCCCATTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTACTACTGAAAATAATAATGCCACGCAAACCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAAACGCACAATAACGCAGCAAGATAGTTTTATTGGCTTTCCAGTTTTTCAGGGCATCGTTCGAAg > 2:87592/1‑228 (MQ=255) ttCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGCCGCCAGATAATTTTACTGACTTTCCAGTTTTTCAGGGTATCGTCCGAAGGCAtt > 1:625079/1‑227 (MQ=255) ttccGTTGGCTGCGATCCAAATCGCCACGCGGCAATTTTCGGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTTGCATTGTTGAGCTCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGCCGCCAGATAATTTTACTGACTTTCCAGTGTTTCAGGGTATCGTCCGAAGGCATTaa < 1:556133/225‑1 (MQ=255) tctcGTTGGCTGCTAACCAAATCGCCGCGCGGCAATGTTCTGGCAAAAGGCCACTCTGACCCT‑GAGACATTGTTCCTCCTGAAAAGAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGCCGCCAGATAATTTTACTGACTTTCCAGTTTTTCAGGGTATCGTCCGAAGGCATTaa < 1:502971/225‑1 (MQ=255) tcccGTTGGCGTCGATCCAAATCGCCGCGCGGCAATGTTCTCGAAAAAGGCCACTCTGAACCT‑TGGACATTGTTCCTCCTGAAAATAATTATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGCCGCCAGATAATTTTACTGACTTTCCAGTTTTTCAGGGTATCGTCCGAAGGCATTaa < 1:136695/225‑1 (MQ=255) ttGGATTCGATCCAAATCGCCGTGCTGCAAGTTTCTGTCAAAATGCCACCCTGAACCT‑GAGCCATTGTTCCTCCTGAAAATAATAATTCCACGGAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCTGTTTGTCCAGACGCAAATTAACGCCGCCAGATAATTTTACTTACTTTCCAGTTTGTCAGGGTATCGTCCGAAGGCATTAACCCtt < 1:688260/228‑1 (MQ=255) aTCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTAGGTGTTTTTTCGCGGCGGCGGGTTGTTTTGACGCAAATTAACGCCGCCAGATCATTTTACTGGCTTTCCAGGTTTTCAGGTTACCTCCCTAAGGGATTAACCCtaccatccca > 1:677228/1‑218 (MQ=255) aTCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGCCGCCAGATAATTTTACTGACTTTCCAGTTTTTCAGGGTATCGTCCCAAGGCATTAACCCTTCAGGCCCa > 2:621938/1‑227 (MQ=255) cAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGCCGCCAGATAATTTTACTGACTTTCCAGTTTTTCAGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACt > 2:124204/1‑228 (MQ=255) aaTGTTCGGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGCCGCCAGATAATTTTACTGACTTTCCAGTTTTTCAGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGaa < 1:124204/225‑1 (MQ=255) ttttCTTGCAAAATTCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGCCGCCAGATAATTTTACTGACTTTCCAGTTTTTCAGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGt < 2:253505/226‑1 (MQ=255) tGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGCCGCCAGATAATTTTACTGACTTTCCAGTTTTTCAGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGt < 2:625079/228‑1 (MQ=255) tGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGCCGCCAGATAATTTTACTGACTTTCCAGTTTTTCAGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGt < 2:446195/228‑1 (MQ=255) tGTTATGGAAAAATGCCCATCTGAACTT‑TGGACTTTTGTCCTCCTGAAAATAATTATGCCTCGCAATCCGTGTCATTGGTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGGCGTTTGTTCAGACGCAAATTAACGCCGCCAGATAATTTTACTGACTTTCCAGTTTTTCAGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGt < 1:691006/228‑1 (MQ=255) ttGGGAAAATGCCGCCCGGAACCTGGAGA‑TTTGTTCCTCCTAAAAATCATAATGCCGCGCAATCCGTGGCATTATTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGTGGTTTGTTCAGACGCAAATTAACGCCGCCAAATAATTTTACTGACTTTCCAGTTTTTCAGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCt < 1:125814/227‑1 (MQ=255) gCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACTTGTTTTTTCGCGCCGGAGTTTTGTTCAGACGCAAATTAACGCCGCCAGTTAATTTTACTGACTTTCCAGTTTTTCAGTGAATCGTCCGCAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGCACTg > 2:410426/1‑219 (MQ=255) gCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGCCGCCAGATAATTTTACTGACTTTCCAGTTTTTCATGGCATCGTCCGAAGGCTTTAACCCTTCCGGACCACGCCATTCCCCCCTCAACgggatgc > 2:125814/1‑220 (MQ=255) aTGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGCCGCCAGATAATTTTACTGACTTTCCAGTTTTTCAGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGtt > 2:166268/1‑228 (MQ=255) aTGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGCCGCCAGATAATTTTACTGACTTTCCAGTTTTTCAGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGtt > 2:227780/1‑228 (MQ=255) | ATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAAAAGTTGCCAGTTTGTCGGCAAATGTTTTACTGGCCGCACGCAGGGCGTCAACTTCCCCTTTCACGTTGGCTTCGATCCAAATCGCCGCGCGGCAATGTTCTGGCAAAATGCCACTCTGAACCT‑GAGACATTGTTCCTCCTGAAAATAATAATGCCACGCAATCCGTGGCATTGTTGAGCGCTATTTTACGTGTTTTTTCGCGGCGGCGGTTTGTTCAGACGCAAATTAACGCCGCCAGATAATTTTACTGACTTTCCAGTTTTTCAGGGTATCGTCCGAAGGCATTAACCCTTCAGGACCACGCCATTCCCCGCTGAACTGGTAGCTAATATGTT > NC_000913/2550310‑2550748 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |