| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,489,442 | Δ1 bp | 5.8% | coding (737/1221 nt) | argD ← | bifunctional acetylornithine aminotransferase and succinyldiaminopimelate aminotransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,489,441 | 0 | A | . | 5.8% | 182.5 / 4.1 | 68 | coding (738/1221 nt) | argD | bifunctional acetylornithine aminotransferase and succinyldiaminopimelate aminotransferase |
| Reads supporting (aligned to +/- strand): ref base A (34/30); new base . (2/2); total (36/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.79e-01 | |||||||||||
ATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCT‑TCCAGCACTTCAGGGGTAT‑TGATG‑ATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAGCTCGCGCAAGCCCTGCAAAAACTCTGGCGTCGCTGCCGTCACACCGCCCTCGCCCTGGATCGGCTCAACCACCACCGCACAGGTGTGATCATCCATCACCGCTTTCACTGCATGGAGATCGTTAA > NC_000913/3489216‑3489661 | aTGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCT‑TCCAGCACTTCAGGGGTAT‑TGATG‑ATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGGCAGAATATCCGCCGTAAc > 2:414827/1‑228 (MQ=255) ggTCAACAAAACGCTGGCGTTTCGCCTGAATGCCT‑TCCAGCACTTCAGGGGTAT‑TGATG‑ATATCAAACGCCGCCCCCGCTACTGCACAGGCCGGAGGATTACCGCCGTAGGTGGAACCGTGAAAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAACCGCCGCCTAACGCTTT‑CCCAAA‑GGGCCAAATAACCGGCGAAAccc > 1:295391/1‑226 (MQ=255) ggTCAACAAAACGCTGGCGTTTCGCCTGAATGCCT‑TCCAGCACTTCAGGGGTAT‑TGATG‑ATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGGGCTAATCGGGAAGCCCCCGCCCAAC‑CCTT‑CGCCCAGGGTCAGAATATCCGGCGTAAccc > 1:427053/1‑226 (MQ=255) ggTCAACAAAACGCTGGCGTTTCGCCTGAATGCCT‑TCCAGCACTTCAGGGGTAT‑TGATG‑ATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGCGGACCCCTGAGAACCAGGATGAAACGCAGAAGCCATTTCAGCCGTGGCCCGCATTGCGCTACATGGGCAGCCACCGCATAACGCTCT‑CGCAGA‑GTACACAATATCCGCCGAAAccc > 1:253877/1‑226 (MQ=255) tcaaaaaagccTGGGGTTTCGCCCGTAGGCCTCTCCAGCCCGT‑AGGGGGATGTGATGCATA‑CAAGCGCCCCCCCCGAAACTACCCGGGCAAGGGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCg < 1:170604/218‑1 (MQ=255) gCGTTTCGCCTGAATGCCT‑TCCAGCACTTCAGGGGTAT‑TGATG‑ATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGCTTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCCCTAATCGGGAAGCCGCCGCCTAACCCTTT‑CGCAAA‑GGTCAGAAAATCCGGCGAAAcccggcaggcaatgtaaga > 1:655000/1‑210 (MQ=255) aaTGCCT‑TCCAGCACTTCAGGGGTAT‑TGATG‑ATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGCAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGACTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGCAGTGCACGTAA‑GCAAACAAAtaga > 1:53618/1‑224 (MQ=255) gCCT‑TCCAGATCTTAAGGGGTAG‑TGATG‑AAACAAAGCGCCCCCCCCGCTACTGCAAAGGCCAGAGTATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGt < 2:613182/228‑1 (MQ=255) aGCACTTCAGGGGTAT‑TGATG‑ATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGCGGAAACGCAGAAGCAATTTCCGCCGTGGCCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGGAGGAATAACCGGCGTACCCCCGCAGAGAAAGTAC‑GCAAACAAAACGCCGGGCCGcccc > 1:656762/1‑228 (MQ=255) ccTTGAGGGGTAT‑TGATG‑ATATCAACCGCCCCCCCCGCTACGGCACAGGCAAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATc < 2:427053/227‑1 (MQ=255) cAGGGGTAT‑TGATG‑ATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAACCGCCGCCTAACGCTTT‑CGCAGA‑GGCCAGAATATCCTGCGTAACGCCGTAGTGCATGTAA‑GCAACCAAATCGCCGGTCCGCCCCATCCCgc > 2:243373/1‑228 (MQ=255) t‑tGATG‑ATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGGTTACCGCCGTAGGTGGAACCGTGCGAACCAGGATGAAACGCAGCAGCAATTTCCGCCGTGGTCAGAATGGCGCTAATCGGGAAGCAGCCGCCTACCGCTTT‑GGCAGA‑GGTCAGAATATCCGTCATACCGCCGTAGTCACAGTAA‑GCAACCAAACCCCCGGccccccccccccgcccctcccct > 1:487810/1‑213 (MQ=255) t‑tGATG‑ATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTa > 2:475100/1‑171 (MQ=255) t‑tGATG‑ATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAACGCAAA‑AAATGCCCGGTCCCCCCCAccccccccggcaat > 1:549007/1‑218 (MQ=255) atCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCaa > 2:32669/1‑227 (MQ=255) atCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCaa > 2:19118/1‑227 (MQ=255) atCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCaa > 2:5530/1‑227 (MQ=255) gccgccCCCGCTACTGAAAGGGCCAGAGGATTCCCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCaat < 2:387335/228‑1 (MQ=255) ccgccCCCGCAACCGCAAAGGCAAGCGGATGCCCGCCTTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCaata < 1:281028/228‑1 (MQ=255) gccCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGCACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCTGCGCCTAACGCTTT‑CGCAGA‑GGTCCGACTATCCGGCGTAACGCCGTAGGGCATGTAA‑CCAAACAAATAGCCGGTCCCCCCCACCCCCCCACGCACTTCATCAAACACCaaaaat > 1:672315/1‑228 (MQ=255) cccccGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCCTCCCGCCCTGCACTCCATCAACCACCaatcat > 2:593463/1‑227 (MQ=255) cacaGGCCAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGctgcctcttat > 2:93146/1‑217 (MQ=255) acaGGCCAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGAt > 2:480845/1‑227 (MQ=255) gCCAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGT‑ACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGcac > 2:457853/1‑227 (MQ=255) caggggtttccccgcgTTGGTGGGACCGTGGAGACCAGGATGAAACGCAGAAGCAATTCCCGCCGGGGTCAGCATGGGGCTAATCGGGAAGCCGCCGGCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAg < 1:413049/214‑1 (MQ=255) cAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAg < 2:257935/228‑1 (MQ=255) aggggATTCCCGCCGTGGGTGGACCCGGGCGAACCCGGATGAAACCCGCAAGCAATTTCCGCCGTGGGCAGCATGGCCCTAATCGGGAAGCCGCCGCCTAACGCTTA‑CGCAGA‑GGTCAGAATAGCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAGc < 1:32669/225‑1 (MQ=255) agactaTTACCCCCGGGGGGTGAGCCGGGAGACCCAGGATGAAACGCGAAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAGc < 1:601951/223‑1 (MQ=255) agGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGCAA‑GCAAACAAATCGCCGGTCCCCCCCATCCCCCACTGCACTTCTTCAAACACCAAAAATGCCTGATGTTGATCGCACACCt > 1:375388/1‑227 (MQ=255) agGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGCCAGCATGGCGCTAATCGGGAAGACGACGCCTACCGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGAAGTGCACGTAC‑GCAAACAAATCGCCGGTCCGCCCCACCCCGAACTGCACTTCATCAAACCCCAATAACGccccaccgctaccccacaacc > 1:281276/1‑208 (MQ=255) tACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACCGCTCGCGCa > 2:271617/1‑228 (MQ=255) tACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGACCTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCCCACCCCGCCCa > 1:441965/1‑228 (MQ=255) tACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGGAGTGCATGAAA‑GCAAACAAATCGCCGGTCAGc > 2:99569/1‑164 (MQ=255) tACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCCTT‑CGCAGC‑GGTCAGAATAACCGGCGTAACGCCGTATTGCATCAAA‑GCAAACAAATCGCCGATCCGCCCCATCCCGCACTGCACGCCATCAAACACCAATAATCCCTCCTCTTAATCCCACATCCCCCGCa > 1:212434/1‑228 (MQ=255) ccgctgggggTGGAACCGTGAGACCCAGGATGAAGCGCAGAACCATTTTCCGCCGTGGTCAGCATGGCGCTAAGCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATCTCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAGCTCGCGCaa < 1:504481/219‑1 (MQ=255) gccgTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGAgcgccagg > 2:601951/1‑212 (MQ=255) gTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACACTTACCGCAAGCCCTg > 2:505349/1‑228 (MQ=255) tagtggggaCCGTGAGAACCAGGAGTAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCCGTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAGCTCGCGCAAGccc < 1:593463/217‑1 (MQ=255) aCCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGT‑ACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCCCACTGCACTTCATCAAAAACCAACAATGCCTGATGTTGACCGCACAGCCCGCGCAAGCCCTCCAAAAAcac > 1:41978/1‑225 (MQ=255) tGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCCCTAATCGGGAAACCGCCGCCTAACGCTTT‑AGCAGA‑GGTCAGAATATCCGGGCTAACGCCGTCGTCCATGTAA‑CCAAACAAGTCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAACACCCACTAAGGCCCGATGTTTATCGCCCAGCTACCGCCAGACCCCCaaaacactagc > 1:98036/1‑220 (MQ=255) ccAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGca < 2:4204/191‑1 (MQ=255) ccAGGATGAAACCGGAAAGCATTTTCCGCCGTGGGCAGCATGGCGCTAACCGGGAAGCCGCCGCCTAACGCTTC‑CGCAGA‑GGGCAGAATTCCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAGCTCGCGCAAGCCCTGCAAAAACTCTGGCGTCGc < 1:37723/227‑1 (MQ=255) ccAGGATGAAACCCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAGCTCGCGCAAGCCCTGCAAAAACTCTGGCGTCGc < 2:655000/227‑1 (MQ=255) aGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGAGCCTGTAA‑GCAAACAAATCGCCGTTCCGCCCCATCCCGCACTGCACTTCATCAAACACAAATAATGCCTGATGCTGCTCGCACAGCTCGCCCAAGCCCCCCAAAAAACCTCGCGTCGCTGCCCTCACCCctcc > 1:71705/1‑228 (MQ=255) gcgTGGTCAGCATGGCCCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAGCTCGCGCAAGCCCTGCAAAAACTCTGGCGTCGCTGCCGTCACACCGCCCTCGCCCTGGa < 2:641851/224‑1 (MQ=255) ccgTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGGTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAGCTCGCGCAAGCCCTGCAAAAACTCTGGCGTCGCTGCCGTCACACCGCCCTCGCCCTGGa < 2:490381/225‑1 (MQ=255) cATGGCGCTAAACGGGAAGCCGCCGCCTAACGCTTT‑CGCAGG‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAGCTCGCGCAAGCCCTGCAAAAACTCTGGCGTCGCTGCCGTCACACCGCCCTCGCCCTGGATCGGCTCAaccac < 2:672315/228‑1 (MQ=255) ttgcctctaccGGGACGCCCCCGCCAACCGCTTT‑CGCCAA‑GGTGAGAATACCCCGCCTAACTCCGTCGTGCAATTAA‑GCAAACAAATCGCCGGTCCTCCCCATCCCGCCCTGCACTTCATCAAACACCAATAATGCCGGATGTTGATCGCACAGCTCGCGCAAGCCCTGCAAAAACTCTGGCGTCGCTGCCGTCACACCGCCCTCGCCCTGGATCGGCTCAaccacca < 1:243373/218‑1 (MQ=255) tggggttAATCGGGAAACCGCCGCCTAACGTCTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAGCTCGCGCAAGCCCTGCAAAAACTCTGGCGTCGCTGCCGTCACACCGCCCTCGCCCTGGATCGGCTCAaccacca < 1:5530/222‑1 (MQ=255) tGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGGCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAGCTCGCGCAAGCCCTGCAAAAACTCTGGCGTCGCTGCCGTCACACCGCCCTCGCCCTGGATCGGCTCAaccacca < 2:375388/228‑1 (MQ=255) gggCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAGCTCGCGCAAGCCCTGCAAAAACTCTGGCGTCGCTGCCGTCACACCGCCCTCGCCCTGGATCGGCTCAaccacca < 2:656370/227‑1 (MQ=255) cgcTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGT‑ACGCCGGAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAGCTCGCGCAAGCCCTGCAAAAACTCTGGCGTCGCTGCCGTCACACCGCCCTCGCCCTGGATCGGCTCAACCACCACCg < 2:41978/227‑1 (MQ=255) gcTAAGCGGGAACCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAAGATCCGGCGTAACGCCGTAGTGCATGGAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACGTCATCAAACACCAATAATGCCGGATGTTGATCGCACAGCTCGCGCAAGCCCTGCAAAAACTCTGGCGTCGCTGCCGTCACACCGCCCTCGCCCTGGATCGGCTCAACCTCCACCg < 1:166875/227‑1 (MQ=255) tAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAGCTCGCGCAAGCCCTGCAAAAACTCTGGCGTCGCTGCCGTCACACCGCCCTCGCCCTGGATCGGCTCAACCACCACCGca < 2:295391/227‑1 (MQ=255) tAATCGGGAAGCCCCCGCCTAACGCTTT‑CGCAGA‑GGGCAGAATACCCGGCGTAACGCCGGAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAGCTCGCGCAAGCCCTGCAAAACCTCTGGCGTCGCTGCCGTCACACCGCCCTCGCCCTGGATCGGCTCAACCACCACCGca < 2:98036/227‑1 (MQ=255) tAAGCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAGCTCGCGCAAGCCCTGCAAAAACTCTGGCGTCGCTGCCGTCACACCGCCCTCGCCCTGGATCGGCTCAACCACCACCGca < 2:53618/227‑1 (MQ=255) aTCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAGCTCGCGCAAGCCCTGCAAAAACTCTGGCGTCGCTGCCGTCACACCGCCCTCGCCCTGGATCGGCTCAACCACCACCGccca > 2:393170/1‑227 (MQ=255) gAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGAATGTAA‑GCAAACAAATCGCGGGTCAGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAGCTCGCGCAAGCCCTGCAAAAACTCTGGCGTCGCTGCCGTCACACACCCCTGCCCCTGGATCGCACCAACCACCACCGCACAGgagt > 2:57859/1‑227 (MQ=255) accccccgccTAACGCTTTGCGC‑GA‑GGTCAGGATCTCCCGCGTAACGCCGTAGTTCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCCCTTCAACAAACACCAATAATGCCTGATGTTGAGCGCACAGCTCGCGCAAGCCCTGCAAAAACTCTAGCGTCGCTGCCGTCACACCGCCCTCGCCCTGGATCGGCTCAACCACCACCGCACAGGTGTGa < 1:19118/222‑1 (MQ=255) aGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAGCTCGCGCAAGCCCTGCAAAAACTCTGGCGTCGCTGCCGTCACACCGCCCTCGCCCTGGATCGGCTCAACCACCACCGCACAGGTGTGa < 2:441965/227‑1 (MQ=255) cTAACGCTTT‑CGCAGA‑GCTCAGAATACCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAGCTCGCGCAAGCCCTGCAAACACTCTGGCGTCGCTGCCGTCACACCGCCCTCGCCCTGGATCGGCTCAACCACCACCGCACAGGTGTGATcatccatc < 2:71705/227‑1 (MQ=255) ttt‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCGTCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGCTGATCGCACAGCTCGCGCAAGCCCTGCAAAAACTCTGGCGTCGATGCCGTCACACCGCCCACGCCCTGGACCAGCTCACACACCACCGCACgggaaccaacccccacacccgcctt > 1:300500/1‑206 (MQ=255) cttccgaaaa‑gGTCCGAAAGTCCGGCGT‑ACGCCGTAGGTCATGTAA‑GCAAACAAACCGCCGGTCCCCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAGCTCGCGCAAGCCCTGCAAAAACTCTGGCGTCGCTGCCGTCACACCGCCCTCGCCCTGGATCGGCTCAACCACCACCGCACAGGTGTGATCATCCATCACCGCttt < 1:457853/219‑1 (MQ=255) t‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAGCTCGCGCAAGCCCTGCAAAAACTCTGGCGTCGCTGCCGTCACACCGCCCTCGCCCTGGATCGGCTCAACCACCACCGCACAGGTGTGATCATCCATCACCGCTTTCa < 2:506958/228‑1 (MQ=255) ggAATATCCGGGGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCCCCGGTCCGCCCCCTCCCGCACTGCACTTCATCAAACCCCAATAATGCCTGATGTTGATCGCACAGCTCGCGCAAGCCCTGCAAAAACTCTGGCGTCGCTGCCGTCACACCGCCCTCGCCCTGGATCGGCTCAACCACCACCGCACAGGTGTGATCATCCATCACCGCTTTCACTGCATGgaga < 2:212434/227‑1 (MQ=255) ccGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAGCTCGCGCAAGCCCTGCAAAAACTCTGGCGTCGCTGCCGTCACACCGCCCTCGCCCTGGATCGGCTCAACCACCCCCGCCCAGGTGTGACCCTCCATCCCCGCTTTACCTCCACGGAAATCGCTaa > 1:112736/1‑228 (MQ=255) ccGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAGCTCGCGCAAGCCCTGCAAAAACTCTGGCGTCGCTGCCGTCACACCGCCCTCGCCCTGGATCGGCTCAACCACCACCGCACAGGTGTGATCATCCATCACCGCTTTCACTGCATGGAGCTCGTTaa > 2:579559/1‑228 (MQ=255) ccGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAGCTCGCGCAAGCCCTGCAAAAACTCTGGCGTCGCTGCCGTCACACCGCCCTCGCCCCGGATCGGCTCAACCACCACCGCACAGGGGTGGTCATCCCTCACCGCTTTCACTGCCCGGAAATCGCTaa > 1:479189/1‑228 (MQ=255) ccGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAGCTCGCGCAAGCCCTGCAAAAACTCTGCCGTCGCTGCCGTCACACCGCCCTCGCCCTGGATCGGCTCAACCACCCCCCCCCAGGGGTGACCACCCCTCCCCCCttcccccgcacgcagcccgtcaa > 1:492180/1‑207 (MQ=255) | ATGGTCAACAAAACGCTGGCGTTTCGCCTGAATGCCT‑TCCAGCACTTCAGGGGTAT‑TGATG‑ATATCAAACGCCGCCCCCGCTACTGCACAGGCCAGAGGATTACCGCCGTAGGTGGAACCGTGAGAACCAGGATGAAACGCAGAAGCAATTTCCGCCGTGGTCAGCATGGCGCTAATCGGGAAGCCGCCGCCTAACGCTTT‑CGCAGA‑GGTCAGAATATCCGGCGTAACGCCGTAGTGCATGTAA‑GCAAACAAATCGCCGGTCCGCCCCATCCCGCACTGCACTTCATCAAACACCAATAATGCCTGATGTTGATCGCACAGCTCGCGCAAGCCCTGCAAAAACTCTGGCGTCGCTGCCGTCACACCGCCCTCGCCCTGGATCGGCTCAACCACCACCGCACAGGTGTGATCATCCATCACCGCTTTCACTGCATGGAGATCGTTAA > NC_000913/3489216‑3489661 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |