New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1293032 =	1 (0.020)	44 (0.820)	29/408	NT	97.8%	intergenic (‑110/‑495)	hns/tdk	global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
	?	NC_000913	= 1979270	NA (NA)					intergenic (‑55/‑483)	insA/uspC	IS1 repressor TnpA/universal stress protein

TATTGCGACTGTTCTACTTTTCATCATTCGCTTAATAGGGAATTCTCGTAAACACAACTAATACAGAAGACTGAAAGGTCGTCAGCCTACGATAATCTCCCCATAAAATGTGACATGAATCAGGAAGTTTTAACCTCACGTGCTGCGAAATCATCGGTGTAAAT‑AGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1293256‑1293032 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTG‑ACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAA‑CATGGCAACTGCA‑GTTCACTTACACCGCTTCTCAACCCGGTACGCACCAGAA  <  NC_000913/1979270‑1979052                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TATTGCGACTGTTCTACTTTTCATCATTCGCTTAATAGGGAATTCTCGTAAACACAACTAATACAGAAGACTGAAAGGTCGTCAGCCTACGATAATCTCCCCATAAAATGTGACATGAATCAGGAAGTTTTAACCTCACGTGCTGCGAAATCATCGGTGTAAAT‑AGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAGG                                                                                                                                                                                                                              >  2:412775/1‑227        ACTGTTCTACTTTTCATCATTCGCTTAATAGGGAATTCTCGTAAACACAACTAATACAGAAGACTGAAAGGTCGTCAGCCTACGATAATCTCCCCATAAAATGTGACATGAATCAGGAAGTTTTAACCTCACGTGCTGCGAAATCATCGGTGTAAAT‑AGGTCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAGGTGATGATG                                                                                                                                                                                                                      >  2:433134/1‑228        ACTGTTCTACTTTTCATCATTCGCTTAATAGGGAATTCTCGTAAACACAACTAATACAGAAGACTGAAAGGTCGTCAGCCTACGATAATCTCCCCATAAAATGTGACATGAATCAGGAAGTTTTAACCTCACGTGCTGCGAAATCATCGGTGTAAAT‑AGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCCCAAGGAGATGCTG                                                                                                                                                                                                                      >  2:521704/1‑228            TTCTACTTTTCATCATTCGCTTAATAGGGAATTCTCGTAAACACCACTCATACAGAAGACTGAGAGGTCGGCAACCTACGATAATCACCCCATAAAATGAGACATGAATCAGGAAGTTTTAACCTCACGTGCTGCGAAATCATCGGTGTAAAT‑ACGGCTATTTGCCGCGCCTTTTCTGGCTAATTTTATGTCAAGAGATTTATTGGCGGACCAAGGTGACGCTGCCAA                                                                                                                                                                                                                  >  1:677567/1‑228            TTCTACTTTTCATCATTCGCTTAATAGGGAATTCTCGTAAACACAACTAATACAGAAGACTGAAAGGTCGTCAGCCTACGATAATCTCCCCATAAAATGTGACATGAATCAGGAAGTTTTAACCTCACGTGCTGCGAAATCATCGGTGTAAAT‑AGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCCCAAGGGAATGCTGCGAA                                                                                                                                                                                                                  >  2:504059/1‑228            TTCTACGTTTCATCATTCGCTTAATAGGGAATTCTCGTAAACACAACTAATACAGAAGACTGAAAGGTCGTCAGCCTACGATAATCTCCCCATAAACTGTAACATGAAGCAGGAAGTTTTAACCTCACGTGCTGCGAAATCATCGGGGTAAAT‑AGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAACGATATTTTTTGGCGTCGCCAAGTGATGCTGCCAA                                                                                                                                                                                                                  >  1:541877/1‑228                atTTTTCATCATTCGCTTAATAGGGAATTCTCGTAAACACAACTAATACAGAAGACTGAAAGGTCGTCAGCCTACGATAATCTCCCCATAAAATGTGACATGAATCAGGAAGTTTTAACCTCACGTGCTGCGAAATCATCGGTGTAAAT‑AGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAGGTGATGCTGCCAACTTA                                                                                                                                                                                                              <  2:312237/226‑1                ACTTTTCATCATTCAGTCAATTGGGAATTCTCGGAAACACAACTAATACAGAAGACTGAAAGGTCGTCAGCCTACGATAATCGCCCCATAAAATGTGACATGAATCAGGAAGTTTTAACCTCACTTGCTGCGAAATCATCGGTGTAAAT‑AGGGCTATATGCCGCGTCTTTTCTGGATAATTTTATGAAAAGATATTTATTGGCGGCACAAGGTGATGCTGCCAACTTA                                                                                                                                                                                                              <  2:677567/228‑1                    TTCATCATTCGCTTAATAGGGAATTCTCGTAAACACAACTAATACAGAAGACTGAAAGGTCGTAAGCCTACGATAATCTCCCCATAAAATGTGACACAAATCAGGAAGTTTTAACCTCTCGTCCTGCGAAATCTTCGGTGTAATT‑AGGGCTATATGCCGCGCCTTTTTTGGCTCATTTCTTCAGAAGATATTTATTGGCGGCCCAAGACGGTGCTGCCcattattctt                                                                                                                                                                                                          >  1:224665/1‑218                      CATCATTCGGTTAATAGGGAATTCCCGTAAACACAACTAATACAGAAGACTGAAAGGTCGTCAGCCTACGATAATCTCCCCATAAAATGTGACATGAATCAGGAAGTTTTAACCTCACGTGCTGCGAAATCATCGGTGTAAAT‑AGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAGGTGATGCTGCCAACTTACTGATT                                                                                                                                                                                                        <  2:13712/228‑1                      CATCATTCGCTTAATAGGGAATTCTCGTAAACACAACTAATACAGAAGACTGAAAGGTCGTCATCCTACGATAATCTCCCCATAAAATGGGACATGAATCAGGAAGTTTTAACCTCACGTGCTGCGAAATCATCGGTGTAAAT‑AGGGCTATATGCCGCGCCTTTTCTGGCAAATTTTATGTAAAGATATTTATTTGTGGCCCAAGGgatatcatccacttttataatt                                                                                                                                                                                                        >  1:671842/1‑206                       attcTTCGCTTAATAGGGAATTCTCGGAAACACAAATAATACAAAAGAACAAAAGGTAGTCAGCCTACGCTAATCTCCCCATAAAATGTGACATGAATCAGGAAGTTTTAACCTCACGTGCTGCGAAATCATCGGTGTAAATAAGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAGGTGATGCTGCCAACTTACTGATT                                                                                                                                                                                                        <  1:176118/224‑1                        ctATTCGCTTAATAGGGAATTCCCGTAAACACAACTAATACAGAAGACGGAAAGGTCGTCAGCCTACGATAATCTCCCCATAAAATGTGACATGAATCAGGAAGTTTTAACCTCACGTGCTGCGAAATCATCGGTGTAAAT‑AGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAGGTGATGCTGCCAACTTACTGATTTA                                                                                                                                                                                                      <  2:288055/226‑1                                                        AACTAATACAGAAGACTGAAAGGTCGTCAGCCTACGATAATCTCCCCATAAAATGTGACATGAATCAGGAAGTTTTAACCTCACGTGCTGCGAAATCATCGGTGTAAAT‑AGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTTTGAAAAGATATTTATTGGCGGCCCAAGGTGATGCTTCCAACTTACTGATTTATTGTTTGGTGGTGTTTTTGGGGTGCTCCAGgg                                                                                                                                                                      >  1:351022/1‑226                                                            AATACAGAAGACTGAAAGGTCGGCAGCCTACGATAATCCCCCCATAAAATGTGACATGAATCAGGAAGTTTTAACCTTACGTGCTGCGAAATCATCGGTGTAAAT‑AGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTT                                                                                                                                                                  <  2:63202/228‑1                                                                   AAGACTGAAAGGTCGTCAGCCTACGATAATCTCCCCATAAAATGTGACATGAATCAGGAAGTTTTAACCTCACGTGCTGCGAAATCATCGGTGTAAAT‑AGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTT                                                                                                                                                            >  2:484567/1‑227                                                                    AGACTGAAAGGTCGTCAGCCTACGATAATCTCCCCATAAAATGTGACATGAATCAGGAAGTTTTAACCTCACGTGCTGCGAAATCATCGGTGTAAAT‑AGGGCTATATGCCTCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCCCAAGGGGATGCTGCCAACTTACTGATTTAGGTTTTTATGGGGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTt                                                                                                                                                           >  1:628960/1‑226                                                                                       caaccaaAATCTCCCCATAAAATGTGACATGAATCAGGAAGTTTTAACCTCACGTTCTGCGAAATCATCGGTGTAAAT‑AGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTT                                                                                                                                       <  1:504059/221‑1                                                                                                 CTCCCCAAAAAATGTGACATGAATCAGGAAGTTTTAGCCTCACGTGCTGAGAAATCCTCGGTGGAAAT‑AGGGCTTTATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTG‑A                                                                                                                            <  1:494157/228‑1                                                                                                  tcaCCATAAAATGTGACATGAATCAGGAAGTTTTAACCTCACGTGCTGCGAAATCATCGGTGTAAAT‑AGGACTATATGCCGGGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTG‑AC                                                                                                                           <  2:479273/225‑1                                                                                                                GACATGAATCAGGAAGTTTTAACCTCACGTGCTGCGAAATCATCGGTGTAAAT‑AGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAGGTGTTGCTGCCAACTTATTGATTTATTGTATTATGGGGTTTTTGGGGTGCTCCAGTGGGTTCTGTTTTTATCAGTTGTCCCTCCTGTTCAG‑TACTGTAGGGGGGGGTGGGTA                                                                                                              >  1:255068/1‑227                                                                                                                                 TTTACCCTCACGTGTTTCGAAATCCTCGGTGTAAAT‑TGGGCTATAGGCCGCGTCTTTTTTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTG‑ACGGGGTGGTGCGTAACGGCAAAAGCACCGCCG                                                                                            <  1:484567/228‑1                                                                                                                                        ttACGTGCTGCGAAATCATCGGTGTAAAT‑AGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTG‑ACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATC                                                                                      <  2:125545/225‑1                                                                                                                                            ttgtgtttaagagtacgtTGTAAAT‑AGGGTTATTGGCGGGGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTCCTATCAGCTGTCCCTCCTGTTCAGCTACTG‑ACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGC                                                                                 <  1:603580/210‑1                                                                                                                                            GTGCTGCGAAATCATCGGTTGAAAT‑AGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGGGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTG‑ACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGC                                                                                 <  2:622579/228‑1                                                                                                                                                                         GCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTG‑ACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGCCATCAGCGCTATTTCTGCTCctgtctcttatacaac                                                      >  2:603580/1‑211                                                                                                                                                                         GCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTG‑ACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGCCATCAGCGCTATCTCTGCTCTCACTGCCGTAAAA‑CAT                                                    >  2:579856/1‑228                                                                                                                                                                         GCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGGGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTG‑ACGGGGGGGTGCGTAACGGCAAAAGCACCGCCCGACATAAGCGCATTCTCTGCGCTCCATCCCGTAAAA‑CAT                                                    >  2:167774/1‑228                                                                                                                                                                             TATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTG‑ACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCCCTGCCGTAAAA‑CACGGC                                                 >  2:135009/1‑227                                                                                                                                                                             TATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCACCAGTGGCTTCTGTTTCTATCAGCTGTACCTTCTGTTCAGCTACTG‑ACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGACCATCAACGCTATCTCTGCTCCCACTGCCGTAAAAacatgc                                                  >  2:200706/1‑221                                                                                                                                                                             TATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGGGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTTAGCTCCTG‑ACGGGGGGGGGCGTAACGGCAAAAGCACCGCCGGACCTCAGGCCTATCTTTGTTGTCCCTGCCGAAAAA‑CAAGGC                                                 >  1:556323/1‑227                                                                                                                                                                                  CGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTTTTTCTATCAGCTGTCCCTCCTTTTTGGCTACTG‑ACGGGGGGGGGCGGAACGGCCAAAGCCCCCCCGGACCCCACCGCTATCTCGCCTTTCCCTGCCGCAAAA‑AACGGCAACccc                                           >  1:423619/1‑225                                                                                                                                                                                   GCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTG‑ACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCG                                                                                  <  2:155811/189‑1                                                                                                                                                                                    tcttTTTTCTGGTTATTTTTTAGAAATATTATTTAGTGGGGGCACAAGGTGATGCTGCCAACTTACTGATTTGGTTTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTG‑ACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAA‑CATGGCAACTGCA‑G                                        <  1:135009/224‑1                                                                                                                                                                                    CGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTG‑ACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAA‑CATGGCAACTGCA                                          >  2:315761/1‑227                                                                                                                                                                                     GTCTTTTCTGGTTAATTTTAGGAAAAGATATTTATTGGCGGCACAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTGGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTG‑ACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAA‑CATGGCAACTGCA‑G                                        <  2:423619/227‑1                                                                                                                                                                                         TTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTG‑ACGGGGTGGTGCGTAACGGCAAAAGCCCCGCCGGACATCAGGGCCATCTCTGCTTTCACTGCCGTAAAA‑CATGGCAACTGCA‑GTTa                                     >  2:133439/1‑225                                                                                                                                                                                          TTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGGGCTCCAGTGGCTTCTGTTTCTTTCAGCTGTTCCTCCTTTTCAGCTA                                                                                                                                 >  1:212918/1‑136                                                                                                                                                                                           TCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTAC                                                                                                                                <  2:212918/136‑1                                                                                                                                                                                                      TTATTAAAAGATTTTTTTTGGCGGCAAAAGGTGAGGCTGCCAATTTCTTGTTTTAGTGTATGATGGGGTTTTGGGGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTG‑ACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAA‑CATGGCAACTGCA‑GTTCACTTACACCGCTTCT                      <  1:412775/228‑1                                                                                                                                                                                                      TTATGAAAGTGTATTTATGTGCGGCACAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTG‑ACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAA‑CATGGCAACTGCA‑GTTCACTTACACCGCTTCT                      <  2:620200/228‑1                                                                                                                                                                                                      TTATGAAAGGATATTTATTGGCGGCACAGGGTGATGCTGCCAACTTACGTAGTGAGTGTAGGATGTTGTTTTTGAGGTGCTCCAGTGGCTTCTGTCTCTAGCAGCTGTCCCTCCTGTTCATCTACTG‑ACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCGCTGCTCTCACTGCCGTAAAA‑CATGGCAACTGCA‑GTTCACTTACACCGCTTCT                      <  2:193676/228‑1                                                                                                                                                                                                         TGAAAAGATATTTATTGGCGGCACAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTG‑ACGGGGTGGTGCGTAACGGCAAAAGCACCCCCGGACATCCGCGCTATCTCTGCTCTCACTTCCGTAAAA‑CATGGCCACGGCA‑GTTGCCTTACACCCCTTCTCA                    >  1:572798/1‑227                                                                                                                                                                                                                         GGCGGCCCAAGGTGATGCCTCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGACCCTCCTGTTCAGCTACTG‑CCGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAA‑CATGGCAACTGCA‑GTTCACTTACACCGCTTCTCAACCCGGTACGCACCAGA   <  2:628960/228‑1                                                                                                                                                                                                                          GCGGCACAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTG‑ACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAA‑AATGGCACCTGAC‑GTTTAATTACACCGCTTTCCAACCCGGGACGCACCAAAA  >  1:549046/1‑228                                                                                                                                                                                                                          GCGGCACAAGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTG‑ACGGGGTGGTGCGTAACGGCAAAAGCACCCCCGGACATCACCGCTATCTCTGCTCTCCCTGCCGTAAAACCCTGGCAACTCCAGGTTACCTTCCCCCCCTCCTC‑ACCCGGAACCCACCAaa   >  1:42062/1‑226                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TATTGCGACTGTTCTACTTTTCATCATTCGCTTAATAGGGAATTCTCGTAAACACAACTAATACAGAAGACTGAAAGGTCGTCAGCCTACGATAATCTCCCCATAAAATGTGACATGAATCAGGAAGTTTTAACCTCACGTGCTGCGAAATCATCGGTGTAAAT‑AGGGCTATATGCCGCGTCTTTTCTGGCTAATTTTATGAAAAGATATTTATTGGCGGCACAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1293256‑1293032 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTG‑ACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTATCTCTGCTCTCACTGCCGTAAAA‑CATGGCAACTGCA‑GTTCACTTACACCGCTTCTCAACCCGGTACGCACCAGAA  <  NC_000913/1979270‑1979052

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.