New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 458799	4 (0.070)	75 (1.430)	53/400	NT	95.0%	intergenic (+99/‑89)	clpX/lon	ATPase and specificity subunit of ClpX‑ClpP ATP‑dependent serine protease/DNA‑binding ATP‑dependent protease La
	?	NC_000913	= 609347	NA (NA)					intergenic (+170/+112)	insL1/entD	IS186 transposase/phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex

GCTGGATTTCCCCCCCAGAAGTGCCGGATCCGAAAAGAAGAACTAACTCGTTGTGGAGAATAACAAAAATGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCAAACATCTCATTCTCACGATGAATGATGACCTGCTGTTTATTCCAG  >  NC_000913/609132‑609561                                                                                                                                                                                                                        |                                                                                                                                                                                                                       gCTGGATTTCCCCCCCAGAAGTGCCGGATCCGAAAAGAAGAACTAACTCGTTGTGGAGAATAACAAAAATGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCCTTCTTCAGATGGTTCAACCCTTAAGTTAGCCCTTATGGGGGTAAAccc                                                                                                                                                                                                            >  1:472917/1‑228 (MQ=9)        ttCCCCCCCAGAAGTGCCGGATCCGAAAAGAAGAACTAACTCGGTGTGGAGAATAACAAAAATGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCat                                                                                                                                                                                                       <  2:593799/226‑1 (MQ=25)           ccccccAGAAGGGCCGGAGCCGAAAAGAAGAACTAACTCGGTGTGGAGAATGACAAAAATGGTCATCCGGAGCTTAACGGTGGCCATTCGTAGGACAGTATCCCTGACAGCCTCCAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCg                                                                                                                                                                                                  <  1:337411/228‑1 (MQ=11)                 aGAAGGGCCGTAGCCGAAAAGAAGGACTAACTCGTTGTGGAGAAGAACCAAAATGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTgt                                                                                                                                                                                             <  2:539248/227‑1 (MQ=255)                        ccGGATCCGAAAAGAAGAACTAACTCGTTGTGGAGAATAACAAAAATGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTgtcaggtcag                                                                                                                                                                                     >  2:103425/1‑228 (MQ=255)                        ccGGACCCGAAAAGAAGAACTAACTCGTGGGGGAGAATAACAAAAATGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTgtcaggtcag                                                                                                                                                                                     <  2:228151/228‑1 (MQ=255)                          gggtgcGAAAAGGAAGACTAACTCGGTGTGGCAGATACAAAAAATGGGCCACCGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGa                                                                                                                                                                                   <  2:323045/223‑1 (MQ=14)                          ggATCCGAAAAGAAGAACTAACTCGTTGTGGAGAATAACAAAAATGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGtcaggtccgg                                                                                                                                                                                    >  2:592585/1‑227 (MQ=255)                          ggATCCGAAAAGAAGAACTAACTCGTTGTGGAGAATAACAAAAATGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGa                                                                                                                                                                                   <  2:472917/228‑1 (MQ=255)                           gATCCGAAAAGAAGAACCAACTCGTTGTGGAGAATAACAAAAATGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCTTCTTAACGAGGCACCGAGGCGTCGCATTCTGCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGAt                                                                                                                                                                                  <  2:97445/228‑1 (MQ=255)                           gATCCGAAAAGAAAAACTAACTCGTTGTGGAGAATAAAAAAAATGGTCATCTTGAGCTTACCGGTGGCCATTCGTGGGACAGTATGCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGAt                                                                                                                                                                                  <  1:491750/228‑1 (MQ=255)                             tCCGAAAAGAAGAACTAACTCGTTGTGGAGAATAACAAAAATGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGCAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTACCGCTTATGGGAGTAATCCCCGCCTATCCGGTTGTCAGGTCAGGATg                                                                                                                                                                                 >  2:42400/1‑227 (MQ=255)                                gcaaaGAAGAACTAACTCGTTGTGGAGAATAACAAAAATGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGCACGCGAGGCATCGTCTTACCGAGGCACCCCGGCGTCGCATTCTTCACATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGGAATCCCCGCATATCCGGCTGTCAGGACAGGAGGGGaa                                                                                                                                                                             >  1:477717/3‑228 (MQ=14)                                     gaaaaaCTAACTCGTTGTGGAGAATGCCAAAAATGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGcgc                                                                                                                                                                        <  2:602709/228‑3 (MQ=255)                                             aacgCGTTGTGGAAAATAACAAAAAGGGTCATCTGGAACTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCttt                                                                                                                                                                 <  2:101380/227‑1 (MQ=255)                                                        gagaATAACAAAAATGGTCATCCGGAGCTTAAAGGTGGCCATTCGTTGGACAGTAGCCCTGACCGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGTCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGccc                                                                                                                                                     <  2:694598/228‑1 (MQ=255)                                                        gaaaagaaCAAAAATGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGAAAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGccc                                                                                                                                                     <  2:652545/222‑1 (MQ=255)                                                        gaaaaaaaCAAAAAGGGGTATTTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGccc                                                                                                                                                     <  1:453266/222‑1 (MQ=255)                                                            attaCAAAAATGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTgg                                                                                                                                                 <  2:299334/225‑1 (MQ=255)                                                            aaaaCAAAAATGTGCATCTGGAGCTTACAGGGGGCAAATCGGGGGACATTATCCCTGACAGCCTCCAAAACGCAATTGAAGACCGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTgg                                                                                                                                                 <  1:678752/226‑1 (MQ=18)                                                              aaCAAAAATGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGTCAGCCTACAAAACGCAATTGCAGAACGCGAGGCATCGTCTTAACGAGGCACCGCGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCAGTTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACCCTTTGGCCGGTggcc                                                                                                                                               >  2:591685/1‑226 (MQ=17)                                                                     aTGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCGGGTCAGGATGGAAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATg                                                                                                                                        >  2:355078/1‑228 (MQ=255)                                                                             tgggagtgtgcAGGTTGTCAGTCGTGGGAGAGTTGCCCTGACGGCCGACGAAAGGCAATTGCAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCgtg                                                                                                                                <  1:633141/218‑3 (MQ=21)                                                                                   gttaacggTGGCCATTCGGGGGACAGTATCCCTGACAGCCTACAAAACGCAAGTGAAGAACCGGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGaa                                                                                                                            <  1:103425/220‑1 (MQ=255)                                                                                     tACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGTTAAGGCACCTGCTTTACACTTTCGCCCGTGGCCCGGGATGGCGGCGGGGGAAtaga                                                                                                                        >  1:646007/1‑225 (MQ=255)                                                                                      aCAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCCTCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGATCAACCCTTACATCAGCGCTTATGGCAGGAATCCCCACATATTCGGTTGTAAGGTCAGGATGGTAGGTCACCTGCTTTACCCTCTCGCCAGTGGCGCGTGATGGCTGCGGGCGAATCGtc                                                                                                                       >  1:219286/1‑227 (MQ=18)                                                                                              ccATCCGTGGTAAAATTTTCCTTACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGTCGTCGAGGGCTCACATTCTGCAGATGGTTCAACCCTTAAGGTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGAtgt                                                                                                               <  1:33348/228‑1 (MQ=25)                                                                                               cattcggaggaacggtccccTGAACGCATCCAAAACGCAATTGAAGTACTGGAGGACTCGTCTTAACGAGGCACCGAGGGGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTGAGGTGAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGAtgtt                                                                                                              <  1:688986/211‑1 (MQ=25)                                                                                                  tCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTc                                                                                                           >  2:498064/1‑228 (MQ=255)                                                                                                          cAGTATCCCTGACAGGCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAAt                                                                                                    <  2:348276/227‑1 (MQ=255)                                                                                                             tATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTg                                                                                                                                           <  2:653436/185‑1 (MQ=255)                                                                                                                    gACCGCCTCCAAAACGCAATTGAAGGACGGGAGGCATCGGCTTAACGGGGCACCGAGGCGGCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGACAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGca                                                                                          <  1:630099/227‑1 (MQ=37)                                                                                                                     accgCCTAAAAAACGGAATTGAAGAACTGGAGGCATCGTCTTAACGTGGCACCGAGGTGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGcac                                                                                         <  1:498064/224‑1 (MQ=255)                                                                                                                     accgCCTAAAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAATGAGGCACCGAGGCGGCGCATTCTTCAGATGGTTCAACCCGTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGcac                                                                                         <  1:42400/224‑1 (MQ=255)                                                                                                                       aGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTACCGCGGCACCGAGGCGTCGCATTATTCAGCTGGTTCAACCCTTACGTTAGCGCTTATGGGGGTAATCTCCGCATATCCGCTTCTCAGGTCAGGATGGTAAGGCACCTGCTTTCCACTTTCGCCCGTGGTCAGTGCTGGCTGGGGCCCATTCGTACCGGCTGTTTCCACTTAACCGTTTTTGCACAgg                                                                                      >  1:290126/1‑227 (MQ=21)                                                                                                                       aGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGGGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTTTTGGCACAg                                                                                       >  2:577967/1‑227 (MQ=255)                                                                                                                         ccTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGGGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTCCACTTTCGCCCGTGGTCGGTGATGGCGGCGGGCGAATCGTACCAGATTTTGTCAATTAATCGTGTGGGcgcacggg                                                                                    >  1:606142/1‑224 (MQ=25)                                                                                                                           tACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGGGATGGCTGCGGGCGAATCGTATCAGATGTTCTCAATTAATCGTGTTGGCCCGGCgaca                                                                                  >  2:635117/1‑225 (MQ=255)                                                                                                                             aaaaaCGCCATTGAATAACGCGAGGGCTCGTCTTAACGAGGGACCGTGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGGGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATg                                                                                <  1:143073/227‑1 (MQ=255)                                                                                                                                aaCGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACt                                                                             <  2:11950/228‑1 (MQ=255)                                                                                                                                   gCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGGCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACtctc                                                                          >  2:427438/1‑228 (MQ=255)                                                                                                                                     aaTTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCCTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGCTGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCCATTAATCGTGTTGGcc                                                                                          >  2:117785/1‑209 (MQ=255)                                                                                                                                       ttGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTCCACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTAtctttt                                                                      >  1:374587/1‑228 (MQ=255)                                                                                                                                             accgcgAGGCATCGTCTTAACGTGGCACCGAGGCTTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGGCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGGGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTa                                                                <  2:219286/226‑1 (MQ=255)                                                                                                                                                    ggCATCGTATTAACGAGGCACCGAGGCGTCGTCTTCTTCAGATGGTTCAACCCTGAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCa                                                         <  2:600633/228‑1 (MQ=255)                                                                                                                                                         ggTCTTTAAGGGGCGCCGAGGTGTCGCTTTTTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCTAATTGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGca                                                    <  1:290789/227‑1 (MQ=255)                                                                                                                                                         cGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTTTTTTAATTGCCAGTGc                                                     >  1:455938/1‑227 (MQ=255)                                                                                                                                                                    ggCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGaa                                                                                                                            >  2:664260/1‑145 (MQ=255)                                                                                                                                                                     gCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTTGTCAGTGATGGCTGCGGGCGAAt                                                                                                                           <  1:664260/145‑1 (MQ=255)                                                                                                                                                                     gCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGAAGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTACCTTTTCTTTTATCTGCCAGTGCCAAGCAAACAtct                                        >  2:290789/1‑228 (MQ=255)                                                                                                                                                                               ctggCATTCTTTAGTTGTTTACATCCTTAAGTTAGGTTTTATGGGAGTATGTCCTGCTTTTCCGGTTGTCATGTCAGGATTGTATGGCATCATCTTTACACTTTTGCCCGTGGTCAGTGATGGCGGCGGGCGAATCGTACCAGATTTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCCGCCAGTGCACAGCAAACATCTCATTCTCACg                              <  1:337641/225‑1 (MQ=255)                                                                                                                                                                                tCGCCTTCTGCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGAATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCAAACATCTCATTCCCACg                              <  2:646007/227‑1 (MQ=255)                                                                                                                                                                                          cAGATGGTTCAACCCTTGAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGGGTTGGTACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCAACCATCTCTTTCTCACGATGAAtgatga                   >  2:683264/1‑228 (MQ=255)                                                                                                                                                                                           aGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCAAACATCTCATTCTCACGATGAatgatg                    <  2:100906/226‑1 (MQ=255)                                                                                                                                                                                             aTGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTAAGTGATGGCTGGGGGCGAATCGTACCAGATGTTGTCAATTAATCGGGTTGGCACAGCGTTATGAGTATCTTTTCGTTAATCTGCCAGTGCACAGCAAACATCTCATTCTCACGATGAAtgatgattg                >  2:337641/1‑225 (MQ=255)                                                                                                                                                                                              tGGTGCAACCCTGAAGTTAGCTGTTATGGGAATCATCCCCGCATTGCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGTTGTTGTCAATTAATCGTTTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCAAACATCTCATTCTCACGATGAATGATGACctg               <  2:290126/228‑1 (MQ=255)                                                                                                                                                                                               ggTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCAAACATCTCATTCTCACGATGAATGATGACctg               <  2:154631/227‑1 (MQ=255)                                                                                                                                                                                                gTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCACTTAATCGTGTTGGCCCAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGTACAGCCAACCTCCCATTCTACCGATGAATGCTGACctc               >  1:100906/1‑225 (MQ=255)                                                                                                                                                                                                  tCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACtt                                                                                                                                                           >  1:402983/1‑84 (MQ=255)                                                                                                                                                                                                  tCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCCCAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCAAACATCTCATTCTCAGGATGAATGCTGAcagtccc            >  2:549811/1‑221 (MQ=255)                                                                                                                                                                                                   cAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACttt                                                                                                                                                          <  2:402983/84‑1 (MQ=255)                                                                                                                                                                                                   cAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCAAACATCTCATTCTCACg                              <  1:549811/208‑1 (MQ=255)                                                                                                                                                                                                           aaGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCACTTAATCGGGTTGGCACAGCGTGATGACTATCTTTTCTTTTATTTACCAGTGCACGGCAACCATCTCATTCTCACGTTGAATGATGACCTTCTGTTTATTACAg  >  1:187303/1‑228 (MQ=255)                                                                                                                                                                                                           aaGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCaa                                              <  2:571806/184‑1 (MQ=255)                                                                                                                                                                                                           aaGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGCCAATTAATCGTGTTGGCACAGCGGTATGACTATCTTTTCTTTTATTTGCCAGTGCACAGCAAACATACAATTCTCACGTTGAATGTTTACCTGCGTTTTAtctga   >  1:270547/1‑223 (MQ=255)                                                                                                                                                                                                            aGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCAAACATCTCATTCTCACGATGAATGATGAc                  <  2:270547/211‑1 (MQ=255)                                                                                                                                                                                                                        |                                                                                                                                                                                                                       GCTGGATTTCCCCCCCAGAAGTGCCGGATCCGAAAAGAAGAACTAACTCGTTGTGGAGAATAACAAAAATGGTCATCTGGAGCTTACAGGTGGCCATTCGTGGGACAGTATCCCTGACAGCCTACAAAACGCAATTGAAGAACGCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCTTTACACTTTCGCCCGTGGTCAGTGATGGCTGCGGGCGAATCGTACCAGATGTTGTCAATTAATCGTGTTGGCACAGCGTTATGACTATCTTTTCTTTTATCTGCCAGTGCACAGCAAACATCTCATTCTCACGATGAATGATGACCTGCTGTTTATTCCAG  >  NC_000913/609132‑609561

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.