New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1979486 =	0 (0.000)	31 (0.580)	20/408	NT	100%	intergenic (‑271/‑267)	insA/uspC	IS1 repressor TnpA/universal stress protein
	?	NC_000913	2101749 =	NA (NA)					intergenic (‑5/+146)	wbbL/insH1	pseudogene, lipopolysaccharide biosynthesis protein/IS5 transposase and trans‑activator

TGATGAGCATAATGTATCGCATGAAAAGCGGGAACATAATGAAGTCTGACACCAGCCAGGCTAAGCCTCAAGCACAGGTCAATATCTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAT‑GTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACAT  >  NC_000913/2101523‑2101963                                                                                                                                                                                                                                   |                                                                                                                                                                                                                        tgatgaACATAATGTATCGCATGGAAAGCGGGAACATAATGAAGTCTGACAACAGCCAGGCTAAGCCTCAAGCACAGGTCAATATCTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTaagg                                                                                                                                                                                                                        <  2:702910/228‑1 (MQ=255)        cATAATGTATCGCATGAAAAGCGGGAACATAATGAAGTCTGACACCAGCCAGGCTAAGCCTCAAGCACAGGTCAATATCTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACAAGCACAAAATCTGAAAAACGAACCAGCATAAATGATCCTGCGCACCAATAAACAACCGTATCAGAATACATACTTTATTTAGGAATTTTTGTTTTATTAAGGAAGGAGc                                                                                                                                                                                                                 >  1:102374/1‑228 (MQ=255)                aacGCATGAAAAGCGGGAACATAATGAAGGCTGACCCCAGCCAAGCTAAGCCTCAAGCACAGGTCAATATCTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAg                                                                                                                                                                                                          <  2:657661/225‑1 (MQ=255)                 tCGCATGAAAAGCGGGAACATAATGAAGTCTGACACCAGCCAGGCTAAGCCTCAAGCACAGGTCAATATCTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATACGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGATGCGAATAACCg                                                                                                                                                                                                        >  2:264791/1‑228 (MQ=255)                                                               aaGACTCAAGTACAGGTCAAAATCTTCAAAGTACAAAAAAGAACCTTGATCCAAGGCAATTTAACGCACAAAATCTGAAAATAGTGCCATCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCTGCTGACTCAGTCATTTCATTTCTTCAT‑Gttt                                                                                                                                                         <  2:524907/228‑1 (MQ=37)                                                                 gCCTCAAGCACAGGTCAATATCTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGAATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAATCGGGGAATTTCTTTTCGTCTGCCTCAGTCATTTCATTTTTTAAT‑GTTTg                                                                                                                                                        >  1:5965/1‑227 (MQ=255)                                                                      aaGCACAGGTCAATATCTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTaag                                                                                                                                                                                                                         >  2:496220/1‑158 (MQ=255)                                                                       aGCACAGGTCAATATCTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTaagg                                                                                                                                                                                                                        <  1:496220/158‑1 (MQ=255)                                                                              gTCAATATCTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCCCAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAAAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAAGAGCGAATAAGCGGTGAAATTCTTCTTGTCTGATTCAGTAATTTCATTTCTTCAG‑GGTTGAATCCATTTTTtc                                                                                                                                           >  1:680931/1‑227 (MQ=255)                                                                              gTCAATACCTTCACAGGACATAAAGTAACCTTGGTCGAAGCCAATTACCCGCACAAAATCTGAAAAACGTACCAGCATTAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAATGAAGGTTCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAT‑GTTTGAGCCGAtttttt                                                                                                                                            <  2:425337/226‑1 (MQ=38)                                                                                        tCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTATTCAT‑GTTTGTGCCGATTTTTTCTCCCGTCAAt                                                                                                                                 >  2:99287/1‑227 (MQ=255)                                                                                                   aaaGTAAACTTGAGCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAT‑GTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAg                                                                                                                     <  2:95582/228‑1 (MQ=255)                                                                                                    aaggacccTTTATCGAATCCATTTACACGCAAAAAATCTGAAAAACGTACCAGCATAAATGTTTCTGCGAACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGTAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAT‑GTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGc                                                                                                                    <  1:99287/222‑1 (MQ=25)                                                                                                    aaGTAACCTTGATCAAAGCCATTTACCCGCAAAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGATCCAATCAACAACCGTATCAGAATAGATAGTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAT‑GTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGc                                                                                                                    <  1:264791/228‑1 (MQ=255)                                                                                                        aaCCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAT‑GTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCATCCTAt                                                                                                                >  1:423612/1‑228 (MQ=255)                                                                                                        aaCCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAT‑GTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTAt                                                                                                                >  2:144640/1‑228 (MQ=255)                                                                                                        aaCCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAT‑GTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTAt                                                                                                                >  2:530895/1‑228 (MQ=255)                                                                                                        aaCCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGCATCAGAATAGATACTTTCTTTAGGCATTTTTGTTTTATTAAGGAAGGTGCGCATAAGCGGGGAAATTTTTCTCGGTTGCTTCAGTCATTTCATTTCTTCAT‑GTTTGAGCTGAGTTTTTCTCCCGTAAATGTCTTGAATCAGCCTAt                                                                                                                >  2:318622/1‑228 (MQ=37)                                                                                                        aaCCTTGATCGAAGCCATTTACACGAACAAAGTCTGAAAAACGTACCAGCATAAATGATCCTGCACACCAATCAACAACCGTATCAGAATAGATACTGTCTTTAGGAATTTTTGATCTATTACGAAAGGTGCGAATAAGCGGGGCAATTCTTATCGGCGTCTTAAGTATTTCCATTTCTTCCT‑GTTTTAGCGCATTTTGTCTCCCGTAAATTCTTTGAATctacctgt                                                                                                                >  1:369548/1‑221 (MQ=255)                                                                                                          ccTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTTTCGGCTGATTCAGTCATTTCATTTCTTCAT‑GTTTGAGCCGCTTTTTTTTCCCGTAAATGCCTTGAATCACCCTAttt                                                                                                              >  1:342542/1‑228 (MQ=255)                                                                                                               aTCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGAATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGAGCGAATAAGCGGGGAAATTCTTCTCGGCTGATTCAGTCATTTAATTTCTTCAT‑GTTTGAGCCGATTTTTTCTCCCGTAAATCCCTTGAATCAGCCTATTTATAcc                                                                                                         >  1:601340/1‑228 (MQ=255)                                                                                                                    aGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTTTCGTCTGACTCAGTCATTTCTTTTCTTCAT‑GTTTGAGCCGATTTTTTTTCCGCTAAATTCTTTGAATCAGCCTATTTAGACGGtttt                                                                                                    >  1:316789/1‑227 (MQ=37)                                                                                                                     gCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAT‑GTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTttct                                                                                                   >  2:407920/1‑228 (MQ=255)                                                                                                                                gCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAT‑GTTTGAGCCGATTTTTTCTCCCGTaa                                                                                                                                   >  2:295483/1‑185 (MQ=255)                                                                                                                                 cacaAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAT‑GTTTGAGCCGAttttt                                                                                                                                             >  2:301210/1‑174 (MQ=255)                                                                                                                                  acaAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGGGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAT‑GTTTGAGCCGAtttttt                                                                                                                                            <  1:301210/174‑1 (MQ=255)                                                                                                                                            aaaaaCGTACCAGCATAAATTGTCCTGCGCACCAATCAACAACCGTATCAGAATAGATGCTTGCTTTAGGAATTTTTGGTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGGCATTTCATTTCTTCAT‑GTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATcccc                                                                            <  2:435322/228‑1 (MQ=255)                                                                                                                                            aaaaaCGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAT‑GTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGATTCAGCCTATTTAGACCGTttctt                                                                                                  >  1:46979/1‑206 (MQ=255)                                                                                                                                            aaaaaCGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAT‑GTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATcccc                                                                            <  2:423612/228‑1 (MQ=255)                                                                                                                                             aaaaCGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATTCTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAT‑GTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTttcttc                                                                                                 <  2:46979/206‑1 (MQ=255)                                                                                                                                                    aCCAGCATAAATGATCATGCGTACCAAACAAAAACCGTATCAGACTAGATACTGTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGTAAATTCTTCTAGGCTTACTCAGCCATTTGATTTCTTCATGGTTTGA‑CCGATTTTTTTTCCCGTAAAGCCTTTTAATCACCCTTTTGTGACCATTTTTTCTCACTTTAAgggttaatctccctgtttt                                                                     >  1:703354/1‑210 (MQ=255)                                                                                                                                                             aaTGATCCTGCGACCCAATCAAAAAACGGATCAGAATAGATCACTTGTTTAGGAATTTTTGTTTTATTAAGGAAGGTTCAAATAAGCGGGGAAATTCTTTTCGGCTGACTCAGTCATTTCATTTCTTCAT‑GTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGAtct                                                           <  1:495972/228‑1 (MQ=17)                                                                                                                                                                   ccTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTCAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAT‑GTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTcccc                                                     >  2:426327/1‑227 (MQ=255)                                                                                                                                                                   ccTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAT‑GTTTGATCCGATTTTTTCTCCCGTAAATGCCTTGAATTCACCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCACTTTTTATTGAGCTCTCTtccc                                                     >  1:1515/1‑227 (MQ=18)                                                                                                                                                                   ccTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAT‑GTTTGAGGCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTTGCGATTTAAGGCGTTATCCCCAGTTTTTAGTGAGTTCTCTCCCa                                                     >  2:331225/1‑228 (MQ=255)                                                                                                                                                                      gcgtACCAATTAACAACCGTAACAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAT‑GTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTg                                                  <  1:530895/228‑1 (MQ=255)                                                                                                                                                                       cgcACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAT‑GTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGa                                                 >  2:17952/1‑228 (MQ=255)                                                                                                                                                                       cgcACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAT‑GTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATAAGCCTATTTGGACCGTTTCTTCGCCATTTAAGCCGTTATCCCCAGTTTTTAGTGAGATCTCTCCACCTGa                                                 >  2:546131/1‑228 (MQ=255)                                                                                                                                                                         cACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGAGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAT‑GTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTATGACCGTTTCTTCGCCATTTATGGCGTTATCCCCAGTTTTTAGTGAGATTCCTCCCACTGAc                                                >  2:675028/1‑227 (MQ=255)                                                                                                                                                                          aCCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGCCTCAGTCATTTCATTTCTTCAT‑GTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGt                                              <  2:316789/228‑1 (MQ=255)                                                                                                                                                                            cAATCAACAACCGTATCAGACTAGATACTTTATTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAT‑GTTGGAGCCGTTTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAATGGGTTTTCCCCAGTTTTTAGTGAGATCTCTCCCATTGACGTa                                             >  1:94496/1‑227 (MQ=17)                                                                                                                                                                                   caacCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAT‑GTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGACTCAGCCTATTTAGACCGTTTCTTCGCCATTTAATGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGCCGTATCATTTgg                                     >  2:326038/1‑228 (MQ=255)                                                                                                                                                                                      ccGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAT‑GTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTAAGATATCTCCCCCTGACTTATCATTTGGTcc                                  >  1:25853/1‑228 (MQ=255)                                                                                                                                                                                      ccGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAT‑GTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGCCGTTATCCCCAGTTTTTAGTTAGATCTCTCCCCCTGCCGTATCATTTGGTcc                                  >  2:6229/1‑228 (MQ=255)                                                                                                                                                                                         tATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAT‑GTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTTAATCAGCCTATTTAGACCGTttcttc                                                                                                 >  1:19406/1‑162 (MQ=255)                                                                                                                                                                                          aTCAGAATAGATACTGTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAT‑GTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCg                                                                                                <  2:19406/162‑1 (MQ=255)                                                                                                                                                                                                 tAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAT‑GTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCCTTTAAGGCGTTATCCCCAGTTTTTATTGAAATCTCTCCCACTTACGAATCATTTGGTCCGCCCGAAACAg                       >  1:208099/1‑228 (MQ=255)                                                                                                                                                                                                 tAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCA‑TTCATTTCTTCAT‑GTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAgg                      >  2:374985/1‑228 (MQ=255)                                                                                                                                                                                                    aTACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAT‑GTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCa                                                                                                                      >  1:279770/1‑130 (MQ=255)                                                                                                                                                                                                    aTACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAT‑GTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGt                                                                                   >  1:226295/1‑165 (MQ=255)                                                                                                                                                                                                    aTACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAT‑GTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGtt                    >  2:377120/1‑228 (MQ=255)                                                                                                                                                                                                    aTACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAT‑GTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGtt                    >  2:121565/1‑228 (MQ=255)                                                                                                                                                                                                    aTACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTAATTTCATTTCTTCAT‑GTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTAGCCATTTATGGCGTTATCCCCGGTTTTTATTGAGATCTCTCCCCCTGACGTATACTTTGGTCCGCCCGAAACAGGtt                    >  2:661963/1‑228 (MQ=14)                                                                                                                                                                                                     ttctttctttAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAT‑GTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAg                                                                                                                     <  2:279770/128‑1 (MQ=255)                                                                                                                                                                                                     tACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAT‑GTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGtt                                                                                  <  2:226295/165‑1 (MQ=255)                                                                                                                                                                                                        tttctttAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCATTCATTTCATTTCTTCAT‑GTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGcc                <  2:703354/228‑1 (MQ=255)                                                                                                                                                                                                         ttctttAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAT‑GTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTATTGAGATCTCTCCCACTGACGTATCATTTgg                                     >  1:55250/1‑206 (MQ=255)                                                                                                                                                                                                         ttctttAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAT‑GTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCa               >  2:71416/1‑228 (MQ=255)                                                                                                                                                                                                         tgttttAGGAATTTTTGTTTTATTAAGGAAGGTTGGAATAAGCGGTGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAT‑GTTTGAGCCGATTTTTTCTCCCGTAAAGGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCa               <  1:407920/225‑1 (MQ=255)                                                                                                                                                                                                          tctttAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAT‑GTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGt                                    <  2:55250/206‑1 (MQ=255)                                                                                                                                                                                                           ttttAGTAATTTTTGTTTTATTAAGGAATGTGCGAATAAGCGGGGAAATTCGTCTCGGCTGACTCAGTCTTTTCATTTCTTCAT‑GTTTGAGCCGATTTTTTCTCCAGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTAGCCCCAGTTTGTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGc             <  1:649230/227‑1 (MQ=255)                                                                                                                                                                                                           ttttAGGATTTTTTGTTTTATTAAGGAAGGTTCGAATAAGCGGGGAAATTCTTGGCGGCTGACTCAGTCATTTCATTTCCTCAT‑GTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCa               <  1:318622/225‑1 (MQ=255)                                                                                                                                                                                                                ggAATTTTTGTTTTATTAAGGAATGTTCTAATAAGCGGGGAAATTCCTCTCGGCTGACTCAGTCATTTCATTTCTTCAT‑GTTTGAGCCGGTTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGa         <  1:144640/227‑1 (MQ=255)                                                                                                                                                                                                                     ttttGGTTTATTAAGGAATGTGAGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAT‑GTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACa   <  2:102374/228‑1 (MQ=18)                                                                                                                                                                                                                      tttGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAT‑GTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCCTTTAAGGCGTTATCCCCAGTTTTTATTGAGATCTCTCCCACTAACGTATCATTTTGTCCGCCCTCAAACGGTTGGCCATCGTGatacattg  >  1:114119/1‑221 (MQ=11)                                                                                                                                                                                                                       ttGTTTTAGTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAT‑GTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGc                 <  2:114119/212‑1 (MQ=17)                                                                                                                                                                                                                                   |                                                                                                                                                                                                                        TGATGAGCATAATGTATCGCATGAAAAGCGGGAACATAATGAAGTCTGACACCAGCCAGGCTAAGCCTCAAGCACAGGTCAATATCTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCACCAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCAT‑GTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACAT  >  NC_000913/2101523‑2101963

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.