| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 908,290 | T→C | 15.0% | intergenic (‑8/+3) | ybjT ← / ← ltaE | putative NAD‑dependent oxidoreductase/L‑allo‑threonine aldolase, PLP‑dependent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 908,290 | 0 | T | C | 15.0% | 124.8 / 2.6 | 55 | intergenic (‑8/+3) | ybjT/ltaE | putative NAD‑dependent oxidoreductase/L‑allo‑threonine aldolase, PLP‑dependent |
| Reads supporting (aligned to +/- strand): ref base T (30/14); new base C (3/6); total (33/22) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.66e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GAAAATAGACCGTATCGATATCCTGCAACAGGGCCGGTAGGTTATCCGGCCAGCTGAGATCGACTTTATGGCAACTGACGTTTGCCAGTTGCAGCTTTGCAAGCCTGTCGACATGACGTGCCGCCGCCAGGATCTGATGCCCTTGCTGGCTGAGTGTGCGCACCAGATGCTGACCAATGTAGCCACTGGCACCGAGAACTAAAATGCGTTGCGGCACGTCTCTCTCCTTAACGCGCCAGGAATGCACGCCAGTGGGCGGCGACTTCCGCCAGTTGTTCGCGCGAGACGTCAAGATGCGTCACCAGGCGGACAATCGGCGAGGCGTTAATCAGCACGTTTCTCGCTTTCATGTATTCGCCTAACGCGGCA‑GCATTTTCTTCCCCGACGCGAACAAACAGCATATTGGTGTCCTGACGCATCACATCCGCGCCTGCTTCACGCAGC > NC_000913/908066‑908509 | gAAAATAGACCGTATCGATATCCTGCAACAGGGCCGGTAGGTTATCCGGCCAGCTGAGATCGACTTTATGGCAACTGACGTTTGCCAGTTGCAGCTTTGCAAGCCTGTCGACATGACGTGCCGCCGCCAGGATCTGATGCCCTTGCTGGCTGAGGGTGCGCACCATATGCTGACCACTGTAGCCACTGGCCCCGGGAACTAAAAAGCGTTGCCGGACGTCTCTCCCCt > 1:88852/1‑228 (MQ=255) attagcacgttacGATTTCCGTCAACAGGCCCGGTAGGTTATCCGGCCAGCTGAGACTGTGTTTATGGCAATGGACGGTTGCCAGTTGACATTTGGCTAGCAGGGTGCCATGACGGGCCGCCGCCAGGATCTGATGCCCTTGCTGGCTGAGTGTGCGCACCGGATGCTGACCAATGTAGCCACTGGCACCGAGAACTAAAATGCGTTGCGGCACGTCTCTCTCCTTaa < 1:501780/216‑1 (MQ=255) cccGTATCGATATCCTTCAAAAGGGCGGGTTGGTTACCCGGCCAGTTGAGATCGCTTTTATGGCAACTGACGTTTGGCAGTTGAAGCTTTGCAAGCCTGTCGCATTGACGTGCCGCCGCCAGGATCTGATGCCCTTGCTGGCTGAGTGTGCGCACCAGATGCTGACCAATGTAGCCACTGGCACCGAGAACTAAAATGCGTTGCGGCACGTCTCTCTCCTTAACgcgc < 1:381211/227‑1 (MQ=255) aCCGTATCGATATCCTGCAACAGGGCCGGTAGGTTATCCGGCCAGCTGAGATCGACTTTATGGCAACTGACGTTTGCCAGTTGCAGCTTTGCAAGCCTGTCGACATGACGTGCCGCCGCCAGGATCTGCTGCCCTTGCTGGCTGAGTGTGCGCACCAGCTGCTGACCAATGTAGCCACTGGCACCGAGAACTACAATCCATTGCGGCCCGTTTCCCTCCCTAAcccc > 1:531814/1‑224 (MQ=255) aCCGTATCGATATCCTGCAACAGGGCCGGTAGGTTATCCGGCCAGCTGAGATCGACTTTATGGCAACTGACGTTTGCCAGTTGCAGCTTTGCAAGCCTGTCGACATGACGTGCCGCCGCCAGGATCTGATGCCCTTGCTGGCTGAGTGTGCGCACCAGATCCTGACCAATGTAGCCACTGGCCCCGAGAACTAAAATCCGTTGCGGCCCGTCTCTCTCCTTAAcgcg > 2:652725/1‑227 (MQ=255) aTCGATATCCTGCAACAGGGCCGGTAGGTTATCCGGCCAGCTGAGATCGACTTTATGGCAACTGACGTTTGCCAGTTGCAGCTTTGCAAGCCTGTCGACATGACGTGCCGCCGCCAGGATCTGATGCCCTTGCTGGCTGAGTGTGAGCACCAGATGCTGACCAATGTAGCCACTGGCACCGAGAACTAAAATGCGTTGCGGCACGTCTCTTTCCTTAACGCCCCAGGa > 2:368255/1‑228 (MQ=255) tttccggaagcAGGGCCGGTGGGTTGTGCGGCCATGGCGGATCGACTTTAGGCCAACTGCCGTTGGCCAGTTGCATCTTTGCAGGCGTGTCGAACTGACGTCCCGCTGCCAGTATCTGATGCCCGTGCTGGCTGAGTGGGCGCCCCAGATGCTGACCAATGTAGCCACTGGCCCCGAGATCTAAAATGCGTTGCGGCACGTCTCTCTCCTTAACGCGCCAGGAATGCa < 1:190830/218‑1 (MQ=255) tCCTGCAACAGGGCCGGTAGGTTATCCGGCCAGCTGAGATCGACTTTACTGCAACTGACGTTTGCCAGTTGCAGCCTTGCAAGCCTGTCGACATGACGTGCCGCCGCCAGGATCTGCCGCCCTTGCTGGCTGAGTGTGCGCCCCAGATCCTGCCCCATTTACCCCCCGGCCCCGCGACCTAAAATCAGTTGCGGCCCCCCTTTCTCCCTacaccccccgacatgccc > 1:171098/1‑210 (MQ=255) tCCTGAAACAGGGCCGGTAGGTTATCCGGCCAGCTGAGATCGACTTTATGGCAACTGACGTTTGCAAGTTGCGGCTTTGCAAGCCTGTCGACATGACGTGCCGCCGCCAGGATCTGATGCCCTTGCTGGCTGAGTGTGCGCACCAGATGCTGACCAATGTAGCCACTGGCACCGAGAACTAAAATGCGTTGCGGCACGTCTCTCTCCTTAACGCGCCAGGAATGCa < 2:52781/226‑1 (MQ=255) tGCAACAGGGCCGGTAGGTTATCCGGCCAGCTGAGATCGACTTTATGGCAACTGACGTTTGCCAGTTGCAGCTTTGCAAGCCTGTCGACATGACGTGCCGCCGCCAGGATCTGATGCCCTTGCTGGCTGAGTGTGCGCACCAGATCCTGACCAATGTAGCCACTGGCACCGGGAACTCAAATCCGTTGCGGCCCGTCTCTCTCCTTAACCCCCCAGGCAAGCCCGca > 1:655531/1‑226 (MQ=255) tGCAACAGGGCCGGTAGGTTATCCGGCCAGCTGAGATCGACTTTATGGCAACTGACGTTTGCCAGTTGCAGCTTTGCAAGCCTGTCGACATGACGTGCCGCCGCCAGGATCTGATGCCCTTGCTGGCTGAGGGTGCGCACCAGATGCTGACCAATGTAGCCACTGGCACCGAGAACTAAAATGCGTTGCGGCACGTCTCTCCCCTTAACGCGCCAGGAATGCACGcc > 2:473543/1‑227 (MQ=255) tGCAACAGGGCCGGTAGGTTAACCGGCCAGCTGAGATCGTCTTTATGGCACCTGACGTTTGCCAGTTTCAGTTTTGCAAGCCTGTCGACATGACGTGCCGCCGCCAGGATCTGATGCCCTTGCTGGCTGAGTGTGCGCACCAGATGCTGACCAATGTAGCCACTGGCACCGAGAACTAAAATGCGTTGCGGCACGTCTCTCTCCTTAACGCGCCAGGAATGCACGCCa < 2:627253/228‑1 (MQ=255) cgttcggTTACCCGGCCGGCTGAGTTCGCCTTTATGGCACCTGACGTTTGCCAGTTGCAGCTTTGCAAGCTTGTCGACATGACGTGCCGCCGCCAGGAGCTGAGGCCCTTGCTGGCTGAGTGTGCGCACCAGATGCTGACCAATGTAGCCACTGGCACCGAGAACTAAAATGCGTTGCGGCACGTCTCTCTCCTTAACGCGCCAGGAATGCACGCCAGTGGGCGGCGa < 2:419326/223‑1 (MQ=255) aGGTTACCCGGCCAGCTGAGATCGACTTTATGGCAACGGACGTTTGCCAGTTGCAGCTTTGCAAGCCTGTCGACATGACGTGCCGCCGCCAGGATCTGATGCCCTTGCTGGCTGAGTGTGCGCACCAGATGCTGACCAATGTAGCCACTGGCACCGAGAACTAAAATGCGTTGCGGCACGTCTCTCTCCTTAACGCGCCAGGAATGCACGCCAGTggctacattggtc < 2:88852/228‑12 (MQ=255) accgggCCAGCTGGATTCGACTTTATGGCAACTGACGTTTGCCAGTTGCAGCTTTGCAAGCCTGTCGACATGACGTGCCGCCGCCAGGATCTGATGCCCTTGCTGGCTGAGTGTGCGCACCAGATGCTGACCAATGTAGCCACTGGCACCGAGAACTAAAATGCGTTGCGGCACGTCTCTCTCCTTAACGCGCCAGGAATGCACGCCAGTGGGCGGCGACTTCCGcc < 2:531814/223‑1 (MQ=255) ggCCAGCTGAGATCGACTTTATGGCAACTGACGTTTGCCAGTTGCAGCTTTGCAAGCCTGTCGACATGACGTGCCGCCGCCAGGATCTGATGCCCTTGCTGGCTGAGTGTGCGCACCAGATGCTGACCAATGTAGCCACTGGCACCGGGAACTAAAATGCGTTGCGGCACGTCTCTCTCCTTAACGCGCCAGGAACGCACGCCAGTGGCCGGCCACTTCCGccgctt > 2:223582/1‑223 (MQ=255) ccAGCTGAGATCGACTTTATGGCAACTGACGTTTGCCAGTTGCAGCTTTGCAAGCCTGTCGACATGACGTGCCGCCGCCAGGATCTGATGCCCTTGCTGGCTGAGTGTGCGCACCAGATGCTGACCAATGTAGCCACTGGCACCGAGAACTAAAAGGCGTTGCGCCACGTCCCTCTCCTTAACGCGCCAGGAATGCACCCCAGTGGGCGGCCACTTCCCCCCgttgt > 2:448745/1‑227 (MQ=255) aCTGACGTTTGCCAGTTGCAGCTTTGCAAGCCTGTCGACATGACGTGCCGCCGCCAGGATCTGATGCCCTTGCTGGCTGAGTGTGCGCACCAGATGCTGACCAATGTAGCCACTGGCACCGAGAACTAAAATGCGTTGCGGCACGTCTCTCTCCTTAACGCACCAGGAATGCACGCCAGTGGGCGGCGTCTTCCGCCAGTTGTTCGCGCGAGACGTAACGATGCGTCa > 2:345879/1‑228 (MQ=255) aCTGACGTTTGCCAGTTGCAGCTTTGCAAGCCTGTCGACATGACGTGCCGCCGCCAGGATCTGATGCCCTTGCTGGCTGAGTGTGCGCACCAGATGCTGACCAATGTAGCCACCGGCACCGAGAACTAAAATGCGTTGCGGCACGTCTCTCTCCTTAACGCGCCAGGAATGCACGCAAGTGGGCGGCGACTTCCGCCAGTCGTTCGCCCGAGAGGTCAAGATCCGCCa > 2:654061/1‑228 (MQ=255) cTGACGTTTGCCAGTTGCAGCTTTGCAAGCCTGTCGACATGACGTGCCGCCGCCAGGATCTGATGCCCTTGCTGGCTGAGTGTGCGCACCAGATGCTGACCAATGCAGCCACCGGCACCGAGACCTAAAATGCGTTGCGGCCCGCCTCTCTCCTTAACGCCCCAGGCTTGCACGCCAGGGGGCGGGCAATCCCCCCGCTTGCTCGCGCGAGACGTccaactgcgcca > 1:601446/1‑216 (MQ=255) cTTTGCAAGCCTGTCGACATGACGTGCCGCCGCCAGGATCTGATGCCCTTGCGGGCTGAGTGTGCGCACCAGATGCTGACCAATGTAGCCCCTGGCACCGAGAACTAAAATGCGTTGCGGCACGTCTCTCTCCTTAACGCGCCAGGAATGCACGCCAGTGGGCGGCGACTTCCGCCAGTTGTTCGCGCGAGACGTCAAGATGCGTCACCAGGCGGACAATCGGCGAgg < 2:520404/228‑1 (MQ=255) aTGACGTGCCGCCGCCAGGATCTGATGCCCTTGCTGGCTGAGTGTGCGCACCAGATGCTGACCAATGTAGCCACTGGCACCGAGAACTAAAATGCGTTGCGGCACGTCTCTCTCCTTAACGCGCCAGGAATGCACGCCAGTGGGCGGCGACTTCCGCCAGTTGTTCGCGCGAGACGTCAAGTTGCGTCACCAGGCGGCCAATCGCCCAGCCGTTAATCAGCACGTTtc > 2:608825/1‑228 (MQ=255) ccgccgccAGGA‑CTGATGCCCTTGCTGGCTGAGTGTGCGCACCAGATGCTGACCAATGTAGCCACTGGCACCGAGAACTAAAATGCGTTGCGGCACGTCTCTCTCCTTAACGCGCCAGGAATGCACGCCAGTGGGCGGCGACTTCCGCCAGTTGTTCGCGCGAGACGTCAAGAATCGTACCCAGGCGGACAATCGCCCAGGCGTTAATAGGCACGTTTCTCGCtttac > 2:594534/1‑226 (MQ=255) ctggctCTGGTTCCCTTGCGGGCTGAGTTGGCGCCCCAGATGTTGACCAATTTAGCCACTGGCACCGAGAACTAAAATGCGTTGCGGCACGTCTCTCTCCTTAACGCGCCAGGAATGCACGCCAGTGGGCGGCGACTTCCGCCAGTTGTTCGCGCGAGACGTCAAGATGCGTCACCAGGCGGACAATCGGCGAGGCGTTAATCAGCACGTTTCTCGCTTTCATGTAt < 1:431787/222‑1 (MQ=255) cAGGATCAGATTCCCTGGCGGGCTGGGTGTACGGAGCAGATGCTGACCAATGTAGCCACTGGCACCGAAAACTAAAATGCGTTGCGGCACGTCTCTCGCCTTAACGCGCCAGGAATGCACGCCAGTGGGCGGCGACTTCCGCCAGTTGTTCGCGCGAGACGTCAAGATGCGTCACCAGGCGGACAATCGGCGAGGCGTTAATCAGCACGTTTCTCGCTTTCATGTAt < 2:171098/227‑1 (MQ=255) aTGCCCTTGCTGGCTGAGTGTGCGCACCAGATGCTGACCAATGTAGCCACTGGCACCGAGAACTAAAATGCGTTGCGGCACGTCTCTCTCCTTAACGCGCCAGGAATGCACGCCAGTGGGCGGCGACTTCCGCCAGTTGTTCGCGCGAGACGTCAAGATGCGTCACCAGGCGGACAATCGGCCAGGCGTTAATCAGCACGTTTTTCGCTTTCATGGATTCGCCTAAca > 2:487986/1‑227 (MQ=255) cccTTGCTGGCTGAGTGTGCGCACCAGATGCTGACCAATGTAGCCACTGGCACCGAGAACTAAAATGCGTTGCGGCACGTCTCTCTCCTTAACGCGCCAGGAATGCACGCCCGTGGGCGGCGACTTCCGCCAGTTGTTCGCGCGAGACGTCAAGATGCGGCACCAGGCGGACAATCGGCGTGGCTCTAATCAGATCGTTTTCCCCTTTCAGGGATTCGCCTAAagcca > 1:644989/1‑226 (MQ=255) cTTGCTGGCTGAGTGTGCGCACCAGATGCTGACCAATGTAGCCACTGGCACCGAGAACTAAAATGCGTTGCGGCACGTCTCTCCCCTTAACGCGCCAGGAATGCACGCCAGTGGGCGGCGACTTCCGCCAGTTGTTCGCGCGAGACGTCAAGATGCGTCACCAGGCGGACAATCGGCGTGGGGTTAATCCGCACGTTTCTCGCGTTCATGTAATCGCCTAACGCGgc > 2:193511/1‑227 (MQ=255) tGCTGGCTGAGTGTGCGCACCAGATGCTGACCAATGTAGCCACTGGCACCGAGAACTAACATGCGTTGCGGCACGTCTCTCTCCTTAACGCGCCAGGAATGCACGCCAGTGGGCGGCGACTTCCGCACGTTTTTCTCGCGCGACGGCCAGATGCGTCCCCAGGCGGACAATCGGCGAGCAGTTACGCACACCGATTCTCGTCTTCAGGTATTAACCTaaaggcgaag > 1:386790/1‑219 (MQ=255) tGCTGGCTGAGTGTGCGCACCAGATGCCGACCAATGTAGCCACTGGCACCGAGAACTAAAATGCGTTGCGGCACGTCTCTCTCCTTAACGCGCCAGGAATGCACGCCAGTGGGCGGCGACTTCCGCCAGTTGTTCGCGCGAGACGTCAAGATGCGTCACCAGGCGGACAATCGGCGAGGCGTTAATCAGCACGTTTCTCGCTTTCATGTATTCGCCTAACGCGgca‑gc < 2:655531/228‑1 (MQ=255) cgcACCAGATGCTGACCAATGTAGCCACTGGCACCGAGAACTAAAATGCGTTGCGGCACGTCTCTCTCCTTAACGCGCCAGGAATGCACGCCAGTGGGCGGCGAGTTCCGCCAGTTGTTCGCGCGAGACGTCAAAAAGCGTCGCCAGGCGGACAATCGCCGAAGCGTTAATCAGCACGTTTCTCGCTTGCAGGTATTCGCCTAACCCGGCAGGCATTTT‑TTCCCCCAc > 1:361318/1‑228 (MQ=255) cgcACCAGATGCTGACCAATGTAGCCACTGGCACCGAGAACTAAAATGCGTTGCGGCACGTCTCTCTCCTTAACGCGCCAGGAATGCACGCCAGTGGGCGGCGACTTCCGCCAGTTGTTCGCGCGAGACGTCAAGATGCGTCACCAGGCGGACAATCGGCGAGGCGTTAATCAGCACGTTTCTCGCTTTCATGTATTCGCCTAACGCGGCA‑GCCTTTTCTTCCCCGa > 2:32921/1‑227 (MQ=255) gcccaaGATGCTGACCAATGTAGCCACTGGCAACGAGAACTAAAATGCGTTGCGGCACGTCTTTCTCCTTAACGCGCCAGGAATGCACGCCAGTGGGCGGCGACTTCCGCCAGTTGTTCGCGCGAGACGTCAAGATGCGTCACCAGGCGGACAATCGGCGAGGCGTTAATCAGCACGTTTCTCGCTTTCATGTATTCGCCTAACGCGGCA‑GCATTTTCTTCCCCGAcg < 2:146046/223‑1 (MQ=255) gCTGACCAATTTAGCCCCTGGCACCGAGAACTAAAATGCGTTGCGGCACGTCTCTCGCCTTAACGCGCCAGGAATGCACGCCAGTGGGCGGCGACTTCCGCCAGTTGTTCGCGCGAGACGTCAAGATGCGTCACCAGGCGGACAATCGGCGAGGCGTTAATCAGCACGTTTCTCGCTTTCATGTATTCGCCTAACGCGGCA‑GCATTTTCTTCCCCGACGCGaacaaa < 2:517811/227‑1 (MQ=255) gACCAATGTAGCCACTGGCACCGAGAACTAAAATGCGTTGCGGCACGTCTCTCTCCTTAACGCGCCAGGAATGCACGCCAGTGGGCGGCGACTTCCGCCAGTTGTTCGCGCGAGACGTCAAGATGCGTCACCAGGCGGACAATCGGCGAGGCGTTAATCAGCACGTTTCTCGCTTTCATGTATTCGCCTAACGCGGCA‑GCATTTTCTTCCCCGACGCGAACAAACAg > 2:520821/1‑227 (MQ=255) gACCAATGTAGCCACTGGCACCGAGAACTAAAATGCGTTGCGGCACGTCTCTCTCCTTAACGCGCCAGGAATGCACGCCAGTGGGCGGCGACTTCCGCCAGTTGTTCGCGCGAGACGTCAAGATGCGTCACCAGGCGGACAATCGGCGAGGCGTTAATCAGCACGTTCCTCGCTTTCATGTATTCGCCTAACGCGGCA‑CCATTTCCTTCCCCCACCCCAACAAACAg > 1:432503/1‑227 (MQ=255) cccatttttgcccgtGGCACCGAGGACAAAAATGCGTTGCGGCACGTCCCTCCCTTTACCGCGCCAGGAATGCCCGCCAGTGGGCGGCGACTCCCGCCAGTTGTTCGCGCGAGACGTCAAGATGCGTCACCAGGCGGACAATCGGCGAGGCGTTAATCAGCACGTTTCTCGCTTTCATGTATTCGCCTAACGCGGCA‑GCATTTTCTTCCCCGACGCGAACAAACAGCa < 1:520821/214‑1 (MQ=255) ccACTGGCACCGAGAACTAAAATGCGTTGCGGCACGTCTCTCTCCTTAACGCGCCAGGAATGCACGCCAGTGGGCGGCGACTTCCGCCAGTTGTTCGCGCGAGACGTCAAGATGCGTCACCAGGCGGACAATCGGCGAGGCGTGAATCAGCACGTTTCTCGATTTCATGTATTCGCCTAACGCGGCA‑GCATTTTCTTCCCCGACGCGAACAACCAGCATATTgggtt > 2:340384/1‑224 (MQ=255) aCTGGCACCGAGAACTAAAATGCGTTGCGGCACGTCTCTCTCCTTAACGCGCCAGGAATGCACGCCAGTGGGCGGCGACTTCCGCCAGTTGTTCGCGCGAGACGTCAAGATGCGTCACCAGGCGGACAATCGGCGAGGCGTTAATCAGCAAGTTTCTCGCTTTCATGAATCTCCCTACGCCGGCA‑GCATTTCCTTCCCCCCCCCGCACAAACCGCATATTGGTGTcc > 1:275374/1‑227 (MQ=255) ggCACCGAGAACTAAAATGCGTTGCGGCACGTCTCTCTCCTTAACGCGCCAGGAATGCACGCCAGTGGGCGGCGACTTCCGCCAGTTGTTCGCGCGAGACGTCAAGATGCGTCACCAGGCGGACAATCGGCGAGGCGTTAATCAGCACGTTTCTCGCTTTCATGTATTCGCCTAACGCGTCA‑GCATTTTCTTCCCCGCCGCGCACACAACGCATATTTGTGTCCTGa > 2:414249/1‑227 (MQ=255) ggCACCGAGAACTAAAATGCGTTGCGGCACGTCTCTCTCCTTAACGCGCCAGGAATGCACGCCAGTGGGCGGCGACTTCCGCCAGTTGTTCGCGCGAGACGTCAAGATGCGTCACCAGGCGGACAATCGGCGAGGCGTTAATCAGCACGTTTCTCGCTTTCATGTATTCGCCTAACGCGGCA‑GCATTTTCTTCCCCGACGCGAACAAACAGCATATTGGTGTCCTGa > 2:104732/1‑227 (MQ=255) ggCACCGAGAACTAAAATGCGTTGCGGCACGTCTCTCTCCTTAACGCGCCAGGAATGCACGCCAGTGGGCGGCGACTTCCGCCAGTTGTTCGCGCGAGACGTCAAGATGCGTCACCAGGCGGACAATCGGCGAGGCGTTAATCAGCACGTTTCTCGCTTTCATGTATTCGCCTAACGCGGAA‑GCATTTTCTTCCCCGCCGCGAACAAACAGCATATTGGGGTCCCGa > 1:513626/1‑227 (MQ=255) ggCACCGAGAACTAAAATGCGTTGCGGCACGTCTCTCTCCTTAACGCGCCAGGAATGCACGCCAGTGGGCGGCGACTTCCGCCAGTTGTTCGCGCGAGACGTCAAGATGCGTCACCAGGCGGACAATCGGCGAGGCGTTAATCAGCACGTTTCTCGCTTTCATGAATTCGCCTAACGCGGCC‑GCATTTTCTTCCCCGCCGCGCACAAACCCCAAATTggggcccgtac > 1:540941/1‑219 (MQ=255) ggCACCGAGAACTAAAATGCGTTGCGGCACGTCTCTCTCCTTAACGCGCCAGGAATGCACGCCAGTGGGCGGCGACTTCCGCCAGTTGTTCGCGCGAGACGTCAAGATGCGTCACCAGGCGGACAATCGGCGAGGCGTTAATCAGCACGTTTCCCGCTTTCATGTATTCGCCTAACGCGGCA‑GCATTTTCTTCCCCGCCGCGAACAACCAGCATATTGGTGTCCTgc > 2:70287/1‑226 (MQ=255) ggcacaaCTAAAATTGTTTGGGGCCCGTCTCTCCCCCTAACGCGCCAGGAATGCACGCCAGTGGGGGGCGACTTCCGCCAGTTGTTCGCGCGAGACGTCAAGATGCGTCACCAGGCGGACAATCGGCGAGGCGTTAATCAGCACGTTTCTCGCTTTCATGTATTCGCCTAACGCGGCA‑GCATTTTCTTCCCCGACGCGAACAAACAGCATATTGGTGTCCTGACGCAt < 1:440299/223‑1 (MQ=255) acGAGAACTAAGATGCGTTGCGGCACGTCTCCCTCCTTAACGGGCCAGGAATGGCCGCCGGTCGGCGGCGACTTCCGCCAGTTGTTCGCGCGAGACGTCAAGATGCGTCACCAGGCCGACAATCGGCGAGGCGTTAATCAGCACGTTTCTCGCTTTCATGTATTCGCCTAACGCGGCA‑GCATTTTCTTCCCCGACGCGAACAAACAGCATATTGGTGTCCTGACGCAt < 2:532257/227‑1 (MQ=255) aaaTGGCTTGCGGCACGGCGCTCCCCTTAACGCGCCAGGAATGCCCGCCAGTGGGCGGCGACTTCCGCCAGTTGTTCGCGCGAGACGTCAAGATGCGTCCCCAGGCGGACAATCGGCGAGGCGTTAATCAGCACGTTTCTCGCTTTCATGTATTCGCCTAACGCGGCA‑GCATTTTCTTCCCCGACGCGAACAAACAGCATATTGGTGTCCTGACGCATCACATCcgc < 2:275374/227‑1 (MQ=255) aaaTGCGTTGCGGCACGTCTCTCTCCTTAACGCGCCAGGAATGCACGCCAGTGGGCGGCGACTTCCGCCAGTTGTTCGCGCGAGACGTCAAGATGCGTCACCAGGCGGACAATCGGCGAGGCGTTAATCAGCACGTTTCTCGCTTTCCTGTATTCCCCTAACGCGGCA‑GCATTTTCTTCCCCGACGCGAACAAACAGCATATGGGTGTCCTGCCGCCTCACATcccc > 1:370380/1‑225 (MQ=255) attggtttGCGGGCCGTCTCCCCCTGTAACGGGCCCGGAACGCACCCCGTGGGGCGGCGACTTCCGCCAGGTGGTCGCGCGAGGCGGCAAGATGCGTCACCAGGCGGACAATCGGCGAGGCGTTAATCAGCACGTTTCTCGCTTGCATGTATTCGCCTAACGCGGCA‑GCATTTTCTTCCCCGACGCGAACAAACAGCATATTGGTGTCCTGACGCATCACATCCgcgc < 1:193511/222‑1 (MQ=255) acggccttGCGGCCGGTCTCGCCCCTTAACGCGCCAGGAATGCACGCCAGTGGGCGGCGACTTCCGCCAGTTGTTCGCGCGAGACGTCAAGATGCGTCACCAGGCGGACAATCGGCGAGGCGTTAATCAGCACGTTTCTCGCTTTCATGTATTCGCCTAACGCGGCA‑GCATTTTCTTCCCCGACGCGAACAAACAGCATATTGGTGTCCTGACGCATCACATCCgcgc < 2:540941/222‑1 (MQ=255) tGCGGCACGTCTCTCTCCTTAACGCGCCAGGAATGCACGCCAGTGGGCGGCGACTTCCGCCAGTTGTTCGCGCGAGACGTCAAGATGCGTCACCAGGCGGACAATCGGCGAGGCGTTAATCAGCACGTTTCTCGCTTTCATGTATTCGCCTAACGCGGCA‑GCATTTTCTTCCCCGACGCGAACAAACAGCATATTGGTGTCCTGACGCATCACATCCGCCCCTgtcc > 2:440299/1‑224 (MQ=255) tGCGGCACGTCTCTCTCCTTAACGCGCCAGGAATGCACGCCAGTGGGCGGCGACTTCCGCCAGTTGTTCGCGCGAGACGTCAAGATGCGTCACCAGGCGGACAATCGGCGAGCCGTTAATCAGCACGTTTCTCGCttt > 2:222964/1‑138 (MQ=255) gcccGTCTCCTTCCTTAACGCGCCAGGAATGCACGACAGTGGGCGGCGACTTCCGCCAGTTGTTCGCGCGAGACGTCAAGATGCGTCACCAGGCGGACAATCGGCGAGGCGTTAATCAGCACGTTTCTCGCTTTCATGTATTCGCCTAACGCGGCA‑GCATTTTCTTCCCCGTCGCGAACAAACAGCATATTGGTGTCCTGACGCATCACATCCGCGCCTGCTTCACGc < 2:644989/225‑1 (MQ=255) aCGTCTCTCCCCTAACCGCGCCAGGAAGGCCCGCCAGTGGGCGGCGACTTCCGCCAGTTGTTCGCGCGAGACGTCAAGATGCGTCACCAGGCGGACAATCGGCGAGGCGTTAATCAGCACGTTTCTCGCTTTCATGTATTCGCCTAACGCGGCA‑GCATTTTCTTCCCCGACGCGAACAAACAGCATATTGGTGTCCTGACGCATCACATCCGCGCCTGCTTCACGCAg < 2:361318/228‑1 (MQ=255) cGTCTCTCTCCTTAACGCGCCAGGAATGCACGCCAGTGGGCGGCGACTTCCGCCAGTTGTTCGCGCGAGACGTCAAGATGCGTCACCAGGCGGGCAATCGGCTAGGCGTTAATCAGCACGTTTCTCGCTTTCATGTATTCGCCTAACGCGGCA‑GCATTTTCTTCCCCGACGCTGACAAACAGCAGATTGGCGCCCTGACGCCTCACCCCCCGCCCTGCTTAACGccta > 1:654570/1‑225 (MQ=255) | GAAAATAGACCGTATCGATATCCTGCAACAGGGCCGGTAGGTTATCCGGCCAGCTGAGATCGACTTTATGGCAACTGACGTTTGCCAGTTGCAGCTTTGCAAGCCTGTCGACATGACGTGCCGCCGCCAGGATCTGATGCCCTTGCTGGCTGAGTGTGCGCACCAGATGCTGACCAATGTAGCCACTGGCACCGAGAACTAAAATGCGTTGCGGCACGTCTCTCTCCTTAACGCGCCAGGAATGCACGCCAGTGGGCGGCGACTTCCGCCAGTTGTTCGCGCGAGACGTCAAGATGCGTCACCAGGCGGACAATCGGCGAGGCGTTAATCAGCACGTTTCTCGCTTTCATGTATTCGCCTAACGCGGCA‑GCATTTTCTTCCCCGACGCGAACAAACAGCATATTGGTGTCCTGACGCATCACATCCGCGCCTGCTTCACGCAGC > NC_000913/908066‑908509 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |