| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,058,486 | T→C | 19.5% | S135P (TCG→CCG) | torC → | trimethylamine N‑oxide (TMAO) reductase I, cytochrome c‑type subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,058,486 | 0 | T | C | 19.5% | 99.6 / 6.8 | 58 | S135P (TCG→CCG) | torC | trimethylamine N‑oxide (TMAO) reductase I, cytochrome c‑type subunit |
| Reads supporting (aligned to +/- strand): ref base T (31/11); new base C (3/9); total (34/24) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.85e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ATATAAACAGTCGGTGCATTTCCAGAACGCCTCCGGCGTGCGAGCTGAATGCCATGACTGTCATATCCCGCCGGATATTCCAGGCATGGTGAAGCGCAAACTGGAAGCGAGCAATGATATCTACCAGACCTTTATTGCTCACTCCATTGATACA‑CCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGG‑CGCGAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCGAAAGATAATCAATCCTGCATCGACTGTCATAAAGGTATTGCCCACCAGTTACCGGATATGAGTAGCGGCTTCCGTAAGCAGTTCGATGAGCTGCGCGCCAGTGCTAATGACAGTGGTGACACGCT > NC_000913/1058263‑1058700 | atatAAACAGTCGGTGCATTTCCAGAACGCCTCCGGCGTGCGAGCTGAATGCCATGACTGTCATATCCCGCCGGATATTCCAGGCATGGTGAAGCGCAAACTGGAAGCGAGCAATGATATCTACCAGACCTTTATTGCTCACTCCATTGATACA‑CCTGAAAAATTCGAAGCCAAAC‑GCGCTGAACTTGCCGAGCGTGAATGGG‑CGCGAATGAAAAAAAAAAACTCgg > 1:657249/1‑227 (MQ=255)atatAAACAGTCGGTGCATTTCCAGAACGCCTCCGGCGTGCGAGCTGAATGCCATGACTGTCATATCCCGCCGGATATTCCAGGCATGGTGAAGCGCAAACTGGAAGCGAGCAATGATATCTACCAGACCTTTATTGCTCACTCCATTGATACA‑CCTGAAAAATTCGAAGCCAAAC‑GCCCGGAACTTGCCGACCGTGAATGGG‑CGCGAATGAAAGAAAAAAACTCgg > 2:449064/1‑227 (MQ=255) gTCGGTGCATTTCCAGAACGCCTCCGGCGTGCGAGCTGAATGCCATGACTGTCATATCCCGCCGGCTATTCCAGGCATGGTGAAGCGCAAACTGGAAGCGAGCAATGATATCTACCAGACCTTTATTGCTCACTCCATTGATACA‑CCTGAAAAATTCGAATCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGG‑CGCGAATGAAAGAAAAAAACTCGGAAAACTCCCg > 1:515503/1‑228 (MQ=255) gTCGGTGCATTTCCAGAACGCCTCCGGCGTGCGAGCTGAATGCCATGACTGTCATATCCCGCCGGATATTCCAGGCATGGTGAAGCGCAAACTGGAATCGAGCGATGATATCTACCAGACCTTTATTGCTCACTCCATTGATACA‑CCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCCGGGGGGCACGGG‑CGGGAATGAAAGAAAAAAAATCGCCAACccgccg > 1:641149/1‑228 (MQ=255) gTCGGTGCATTTCCAGAACGCCTCCGGCGTGCGAGCTGAATGCCATGACTGTCATATCCCGCCGGATATTCCAGGCATGGTGAAGCGCAAACTGGAAGCGAGCAATGATATCTACCAGACCTTTATTGCTCACTCCATTGATACA‑CCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGGGAATGGC‑GGCGAATGAAAGAAAACAACTCGCCAAccgcccg > 2:133233/1‑223 (MQ=255) tCGGTGCATTTCCAGAACGCCTCCGGCGTGCGAGCTGAATGCCATGACTGTCATATCCCGCCGGATATTCCAGGCATGGTGAAGCGCAAACTGGAAGCGAGCAATGATATCTACCAGACCTTTATTGCTCACTCCATTGATACA‑CCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGCGCGTGAATGGG‑CGCGAATGAAAAAAAAAAACCCGGAAACCTGCCgg > 1:282129/1‑227 (MQ=255) cGGTGCATTGCCAGACCGCCGCCGGCGTGCGAGCTGAAGGCCATGACTGTCATCTCCCGCAGGATATCCCAGGCATGGTGAAGCGAAAACTGGAAGCGAGCAATGATATCTACCAGTCCTTTATTGCTCACTCCATTGATACA‑CCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGG‑CGCAAATGAAAGAAAACAACTCGGCAACCTGCCGCt < 2:190932/228‑1 (MQ=255) tCCAGAACGCCTCCGGCGTGCGAGCTGAATGCCATGACTGTCATATCCCGCCGGATATTCCAGGCATGGTGAAGCGCAAACTGGAAGCGAGCAATGATATCTACCAGACCTTTATTGCTCACTCCATTGATACA‑CCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGG‑CGCGAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATa > 2:497711/1‑228 (MQ=255) ccgaccGCCTCCGGCGTGCGAGCTGAATGCCATGCCTGGCATACCCCGCCGGATATTCCAGGCATGGTGAAGCGCAAACTGGAAGCGAGCAATGATATCTACCAGACCTTTATTGCTCACTCCATTGATACC‑CCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGG‑CGCGAATGAAAGAAAACAACCCGGCAACCTGCCGCTCCTGCCAt < 2:488565/220‑1 (MQ=255) gAACGCCTCCGGCGTGCGAGCTGAATGCCATGACTGTCATATCCCGCCGGATATTCCAGGCATGGTGAAGCGCAAACTGGAAGCGAGCAATGATATCTACCAGACCTTTATTGCTCACTCCATTGATACA‑CCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGG‑CGCGAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCGTAACTa > 2:208547/1‑228 (MQ=255) cGCCTCCGGCGGGCGAGCTGAATGCCATGACTGTCATATCCCGCCGGATATTCCAGGCATGGTGAAGCGCAAACTGGAAGCGAGCAATGATATCTACCAGACCTTTATTGCTCACTCCATTGATACA‑CCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGG‑CGCGAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATAACTAcg < 2:87488/227‑1 (MQ=255) cGAGCTGAATGCCATGACTGTCATATCCCGCCGGATATTCCAGGCATGGTGAAGCGCAAACTGGAAGCGAGCAATGATATCTACCAGACCTTTATTGCTCACTCCATTGATACA‑CCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGC‑CTCGAATGAAAGAAAACAACCCGGCAACCCGCCGGCCCTGCCCTAACTACGAAGCAAAGGAACa > 1:119057/1‑227 (MQ=255) caggcgtGTCATAACCCGCCGGTTATTCCAGGCATGGGGAAGCAAAACGTGGAAGCGAGCAGTGATATCTGCCAGACCTTTATTGGCCACTCCAGTGATGCA‑CCTGAAAAATTCGAAGCCAAGC‑GCCCGGACCTTGCCGAGCGTGAATGGG‑CGCGAATGAAAGAAAACAACCCGGCAACCTGCCTCTCCTGCCATAACTACGATGCGATGGATCATGCGAAgcagca < 2:515503/221‑1 (MQ=255) tCATATCCCGCCGGATATTCCAGGCATGGTGAAGCGCAAACTGGAAGCGAGCAATGATATCTACCAGACCTTTATTGCTCACTCCATTGATACA‑CCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGG‑CGCGAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATAACTACGTTGCGATGGATCATGCGAAGCAGCATCCTGAagc > 2:561719/1‑228 (MQ=255) cgccgGATATTCCAGGCATGGTGAAGCGCAAACTGGAAGCGAGCAATGATATCTACCAGACCTTTATTGCTCACTCCATTGATACA‑CCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGG‑CGCGAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATAACTACGATGCGATGGATCATGGGAAGCAGCATCCTGAAGCAGCA‑CGTc > 2:558378/1‑228 (MQ=255) cgccgGATATTCCAGGCATGGTGAAGCGCAAACTGGAAGCGAGCAATGATATCTACCAGACCTTTATTGCTCACTCCATTGATACA‑CCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGG‑CGCGAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATAACTACGATGCGATGGATCATGCGAACCAGCATCCTGAAGCAGCC‑CGTc > 2:205604/1‑228 (MQ=255) gCATGGTGAAGCGCAAACTGGAAGCGAGCAATGATATCTACCAGACCTTTATTGCTCACTCCATTGATACA‑CCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGG‑CGCGAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATAACTACGATGCGAAGGACCATTCGAAGCACCATCCTAAAGCAGCA‑CGTCAGATaaaagaggaag > 1:635779/1‑220 (MQ=255) ggTGAAGCGCAAACTGGAAGCGAGCAATGATATCTACCGGACCTTTATTGCTCACTCCATTGATACA‑CCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGG‑CGCGAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATAACTACGATGCGATGGGTCATGCGAAGCAGCATCCTGAAGCAGAC‑CGTCAGATGAAGGTGGCAGCGa > 2:41716/1‑227 (MQ=255) gTGAAGCGCAAACTGGAAGCGAGCAATGATATCTACCAGACCTTTATTGCTCACTCCATTGATACA‑CCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGTG‑CGCGAATGCAAGAAAACAACCCGGCAACCGGCCGCTCCTGCCATAACTACGATGCCATGGATCATGCAAAGCAGCACCCT‑TCCCAACACCGCCAGATGAAGGGGGCGGCGaaa > 1:59041/1‑228 (MQ=255) gTGAAGCGCAAACTGGAAGCGAGCAATGATATCTACCAGACCTTTATTGCTCACTCCATTGATACA‑CCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGAGTGAATGGG‑CGCGAATGAAAGAACACAACTCGGCAACCTGCCGCTCCTGCCTTAACTACGATGCGGTGGATCATGGGAACCAGCATCCTGAAGAAGAA‑Cgccggcgcaggggggacgggaa > 1:134358/1‑206 (MQ=255) gcgcAAACTGGAAGCGAGCAATGATATCTACCAGACCTTTATTGCTCACTCCATTGATACA‑CCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGG‑CGCGAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCGAAAGCTa > 2:413620/1‑227 (MQ=255) cgcAAACTGGAAGCGAGCAATGATATCTACCAGACCTTTATTGCTCACTCCATTGATACA‑CCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGG‑CGCGAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATAACTACGATGCGATGGAACATGCGAAGCAGCATCCTGAACAACCA‑CCCCAGAGAAAGGTGGCAGCGAAAGATaat > 1:337363/1‑228 (MQ=255) aCTGGAAGCGAGCAATGATATCTACCAGACCTTTATTGCTCACTCCATTGATACA‑CCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGG‑CGCGAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGCCAGATGAAGGTGGCAGCGAAAGATaatcaatc > 2:24285/1‑228 (MQ=255) aCTGGAAGCGAGCAATGATATCTACCAGACCTTTATTGCTCACTCCATTGATACA‑CCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGG‑CGCGAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATAACTACGATGCGATGGACCATGCGAAGCAGCAACCTGAAGCACCA‑CGCCAACGGAAGGGGGACGCGAAAAAAaataaaac > 1:207114/1‑226 (MQ=255) gacattaaatatcacaaaacttttATTGC‑CACTCCCGTTAAACACCCTAAAAAAACCGAAACAAACA‑GCGGGGAACTACCCG‑GCGGGAAGGGGCCGACAATGAAAGAAACAAACCCGGCAACCTCCCGCTCCTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCGAAAGATAATCAATCCTGCATCGAc < 1:131781/207‑1 (MQ=255) atcAATGATATCTACCAGACCTTTATTGCACACTCCATTGACACA‑CCTGAAAAATTCGAAGCCAACC‑GCGCGGAACTTGCCGAGCGTGAAGGGG‑CGCGAATGAAAGAAACCAACTCGGCAACCTGCCGCTCCTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCGAAAGATAATCAATCCTGCATCGAc < 2:119057/226‑1 (MQ=255) aGCAATGATATCTACCAGACCTTTATTGCTCACTCCATTGATACA‑CCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGG‑CGCGAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATAACTACGATGCGATGGATCATCCGAAGCAGCATCCTGAAGCAGCA‑CGGCAGATAAAGGTGGCACCGAAGAAAAACCAATCCTgaacagcc > 2:274268/1‑221 (MQ=255) aaacgcacaaGACCTTTAATGCTCACTCAATTGATACC‑ACGGAAAAATGCAAAGCAAAAC‑GCGGGGAACTGGCCGAGCGTGAAGGGG‑CGCGAATGAAAGAAAACAACACGGCAACCTGCCGCTCCTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCGAAAGATAATCAATCCTGCATCGACTGTCATa < 2:341194/219‑1 (MQ=255) cagccttttATTGCTCACTCCATTGATACA‑CCTAAAAAATCCGAACCCAACC‑CGGCCGAACTTGCCGGGCGGGAAGGGG‑CGCGAATGAAAGAAAACAACCCGGCAACCTGCCGCTCCTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCGAAAGATAATCAATCCTGCATCGACTGTCATAAAGGTa < 2:237149/220‑1 (MQ=255) gACCTTTATTGCTCACTCCATTGATACA‑CCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGG‑CGCGAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCGGCGAAAGATATTCAAACTTGCACCGACTGTCATACAGGAAtgg > 2:257071/1‑225 (MQ=255) gACCTTTATTGCTCACTCCATTGATACA‑CCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGG‑CGCGAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGCCAGCTGAAGGGGGCAGCGAAAGATAATCAATCATGCATGCACTTTCAAAAAGGAAATGc > 1:672853/1‑228 (MQ=255) aCCTTTATTGCTCACTCCATTGATACA‑CCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGG‑CGCGAATGAACGAAAACAACTCGGCAACCTGCCGCTCCTGCCCTAACTACGATGCGATGGATCATGCGACGCAGCATCCTGAAACAGCC‑CGTCCGATGAAGGTGTCCGCGCAAGATAATCAATCCCGCCTCGCCCGTCATAAAGGAATTGcc > 1:341194/1‑228 (MQ=255) aCCTTTATTGCTCACTCCATTGATACA‑CCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGG‑CGCGAATGAAAGAAAACAACTCGGc > 1:50030/1‑101 (MQ=255) ccTTTATTGCTCACTCCATTGATACA‑CCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGG‑CGCGAATGAAAGAAAACAACTCGGCa < 2:50030/101‑1 (MQ=255) tttATTGCTCAATCCATGAATACC‑CCAAAAAAATTAGAAGCCAAAC‑CCGCGGACTTTGCCGGGCGTGAAGGGG‑AGCAAAGGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCGAAAGATAATCAATCCTGCATCGACTGTCATAAAGGTATTGCccac < 2:635779/228‑1 (MQ=255) aTTGCTCACTCCATTGATACA‑CCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGG‑CGCGAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCGAAAGATAATCAATCCTGCATCGACTGTCATAAAGGAATTGCCCACCAg > 2:180386/1‑228 (MQ=255) cccccTCCATTGATACA‑CCAGAAAAATTCAAAGCCAAAC‑GCGCGGAACTGCCGGGGGGTGATGGGG‑GGAAAAAGAAAGAAAACACCCCGGCACCCTGCCGCTCCTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCGAAAGATAATCAATCCTGCATCGACTGTCATAAAGGTATTGCCCACCAGTTAc < 1:497711/224‑1 (MQ=255) cgcacaccatgaatccccttGAAAAAGTCAAAGCAAACC‑GCGCGGACCTTCCCGAGCGTGAGTGGG‑CGCGAAGAAAAGAAAACAACCCGGCACCCTGCCGCTCCTGCCATAACTGCGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCGAAAGATAATCAATCCTGCATCGACTGTCATAAAGGTATTGCCCACCAGTTAc < 1:180386/209‑1 (MQ=255) caacacATTGAAACA‑CCGAAAAAATTCGAAGCCAACC‑GCGCGGAACTGGCCGAGCGGGAATGGG‑CGCGAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCGAAAGATAATCAATCCTGCATCGACTGTCATAAAGGTATTGCCCACCAGTTAc < 2:657249/221‑1 (MQ=255) gacacacgaaaaaaaTTGAAGCCCAACAGCGCGGAACTGGCCGAGCTTGAAGGGG‑CTAGAAGGAAAGAAAACAACGCGGCAACCGGCCGCTCCTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCGAAAGATAATCAATCCTGCATCGACTGTCATAAAGGTATTGCCCACCAGTTACCGGATATGAGt < 1:468716/219‑1 (MQ=255) ca‑cCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGG‑CGCGAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCGAAAGATAATCAATCCTGCATCGACTGTCATAAAGGTATTGCCCACCAGTTACCGGATATGAGTAGc > 2:457288/1‑227 (MQ=255) ca‑cCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGG‑CGCGAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCGAAAGATAATCAATCCTGCATCGACTGCCATCAAGGAATTGCCCACCGGTAACCGGatttaagaacc > 2:436147/1‑218 (MQ=255) ccTGAACAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGG‑CGCGAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCGAAAGTTAATCACTCCTGCATCGCCTGTCGTAAAGGTATGGCCCACCAGTTCCCGGCTAGgaggagacga > 2:306624/1‑224 (MQ=255) ccTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGG‑CGCGAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCGAAAGATAATCAATCCTGCATCGACTGTCATAACGGGATTGCCCACCCGTTACCGGCTATGAg > 2:468716/1‑221 (MQ=255) ccTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGG‑CGCGAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCGAAAGATAATCAATCCTGCATCGACTGTCATAAAGGAATTGCCCACCAGTTACCGGCTATGAGTAGCGGc > 2:481848/1‑228 (MQ=255) aaCTTGCCGGCGGTGAATGGG‑CGAGAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCGAAAGATAATCAATCCTGCATCGACTGTCATAAAGGTATTGCCCACCAGTTACCGGATATGAGTAGCGGCTTCCGTAAGCAGTTCGATGAGCTgcg < 2:534916/226‑1 (MQ=255) ctGCCGGGCGGAAAGGGG‑CGGAAATGAAAGAAACAAGCTCGCACACCTGCCGCCCCTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCGAAAGATAATCAATCCTGCATCGACTGTCATAAAGGTATTGCCCACCAGTTACCGGATATGAGTAGCGGCTTCCGTAAGCAGTTCGATGAGCTGCGCGCCa < 2:672853/227‑1 (MQ=255) gggAATGGG‑CACGAATGAAAAAAAACACATCGGCAACCTGCCGCCACTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCGAAAGATAATCAATCCTGCATCGACTGTCATAAAGGTATTGCCCACCAGTTACCGGATATGAGTAGCGGCTTCCGTAAGCAGTTCGATGAGCTGCGCGCCAGTGCTAAt < 2:282129/225‑1 (MQ=255) gggaagggggggaataaaaaaaaaaCACCCGGGAAACCCGCCCTCCCTGCCAAAACTACGATGCGATGGATCAAGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCGAAAGATAATCAATCCTGCATCGACTGTCATAAAGGTATTGCCCACCAGTTACCGGATATGAGTAGCGGCTTCCGTAAGCAGTTCGATGAGCTGCGCGCCAGTGCTAAt < 1:24285/210‑1 (MQ=255) aaTGGG‑CGCGAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCGAAAGATAATCAATCCTGCATCGACTGTCATAAAGGTATTGc > 2:176083/1‑157 (MQ=255) cgcgAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCGAAAGATAATCAATCCTGCATCGACTGTCATAAAGGTATTGCCCACCAGTTACCGGATATGAGTAGCGGCTTCCGTAAGCAGTTCGATGAGCTGCGCGCCAGTGCTAATGACAgtgg > 2:471753/1‑226 (MQ=255) cgcgAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCGAAAGATAATCAATCCTGCATCGACTGGCATAAAGGTATTGCCAACCAGTTACCGGATATGAGTAGCGGCTTCCGTAAGCAGTTCGATGAGTTGCGCGCCAGTGCTAATGACCgtgg > 2:658016/1‑226 (MQ=255) gtaaaggaaagaaaACAACCCGGCACCCTGCCGCCGCTGCCATAACTCCGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCTAAAGATAATCAATCCTTCACCGACTGTCATAAAGGTATTGCCCACCAGTTACCGGATATGAGTAGCGGCTTCCGTAAGCAGTTCGATGAGCTGCGCGCCAGTGCTAATGACAgtggtg < 2:641149/221‑1 (MQ=255) gggAAGGAAAAAAAACGACGGGTCACCCGCCCGCCCCTGCCATAACTACGAGGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCGAAAGATAATCAATCCTGCATCGACTGTCATAAAGGTATTGCCCACCAGTTACCGGATATGAGTAGCGGCTTCCGTAAGCAGTTCGATGAGCTGCGCGCCAGTGCTAATGACAgtggtg < 1:273534/225‑1 (MQ=255) aaTAAAAGAAAACAACGCGGCACTCTGCCGCTCCTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCGAAAGATAAGCAATCCTGCATCGACTGTCATAAAGGTATTGCCCACCAGTTACCGGATATGAGTAGCGGCTTCCGTAAGCAGTTCGATGAGCTGCGCGCCAGTGCTAATGACAGTGGTGaca < 2:259712/227‑1 (MQ=255) tGAAAAAAAACAACTCGGCAACCTGCAGCTCCTGACATAACTACGATGCGATGGATCAGGCGAAGCAGCAGCGTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCGAAAGATAATCAATCCTGCATCGACTGTCATAAAGGTATTGCCCACCAGTTACCGGATATGAGTAGCGGCTTCCGTAAGCAGTTCGATGAGCTGCGCGCCAGTGCTAATGACAGTGGTGACACg < 2:337363/227‑1 (MQ=255) ataaaaaaaaCAACTCGGCACCCTGCCCCCCCTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCGAAAGATAATCAATCCTGCATCGACTGTCATAAAGGTATTGCCCACCAGTTACCGGATATGAGTAGCGGCTTCCGTAAGCAGTTCGATGAGCTGCGCGCCAGTGCTAATGACAGTGGTGACACg < 2:207114/225‑1 (MQ=255) ccaagaaaACACCCCGGCCACCGCCCCGCCCTGCCATAACTACGATGCGATGGAACATGCGAAGCAGCATCCTGAAGCAGCC‑CGTCAGATGAAGGTGGCAGCGAAAGATAATCAATCCTGCATCGACTGTCATAAAGGTATTGCCCACCAGTTACCGGATATGAGTAGCTGGTTCCGTAAGCAGTTCGATGAGCTGCGCGCCAGTGCTAATGACAGTGGTGACACGCt < 1:608662/226‑1 (MQ=255) | ATATAAACAGTCGGTGCATTTCCAGAACGCCTCCGGCGTGCGAGCTGAATGCCATGACTGTCATATCCCGCCGGATATTCCAGGCATGGTGAAGCGCAAACTGGAAGCGAGCAATGATATCTACCAGACCTTTATTGCTCACTCCATTGATACA‑CCTGAAAAATTCGAAGCCAAAC‑GCGCGGAACTTGCCGAGCGTGAATGGG‑CGCGAATGAAAGAAAACAACTCGGCAACCTGCCGCTCCTGCCATAACTACGATGCGATGGATCATGCGAAGCAGCATCCTGAAGCAGCA‑CGTCAGATGAAGGTGGCAGCGAAAGATAATCAATCCTGCATCGACTGTCATAAAGGTATTGCCCACCAGTTACCGGATATGAGTAGCGGCTTCCGTAAGCAGTTCGATGAGCTGCGCGCCAGTGCTAATGACAGTGGTGACACGCT > NC_000913/1058263‑1058700 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |