| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,223,934 | A→C | 18.9% | intergenic (+36/+2) | dld → / ← pbpG | D‑lactate dehydrogenase, FAD‑binding, NADH independent/D‑alanyl‑D‑alanine endopeptidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,223,934 | 0 | A | C | 18.9% | 75.5 / 2.4 | 49 | intergenic (+36/+2) | dld/pbpG | D‑lactate dehydrogenase, FAD‑binding, NADH independent/D‑alanyl‑D‑alanine endopeptidase |
| Reads supporting (aligned to +/- strand): ref base A (18/19); new base C (2/8); total (20/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.54e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCGTTAAAAGAACAGATGCTGGAACTGCTACAGCAGCGCGGCGCGCAGTACCCTGCCGAGCATAACGTCGGTCATTTGTATAAAGCACCGGAGACGTTGCAGAAGTTCTATCGCGAGAACGATCCGACCAACAGCATGAATCCGGGGAT‑CGGTAAAACCAGTAAAC‑GGAAAAACTGGCA‑GGAAGTGGAGTAAAAATTACGGATGGCAGAGTATCGCCATCCGAATTCACTTAATCGTTCTGTGCCGTCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATCGGCAAAATGGGTATATTTGCCAAACGCGTCCATCACTACCAGCGC‑CACCGGTTTATTATTGATAACCGTACGCATCACCAGACAATGGCCCGC > NC_000913/2223707‑2224157 | gCGTTAAAAGAACAGATGCTGGAACTGCTACAGCAGCTCGGCGCGCAGTACCCTGCCGAGCATAACGTCGGTCATTTGTATAAAGCCACGGAGACGTTGCAGAAGTTCTATCGCGAGAACGATCCGACCAACAGCATGAATCCGGGGAT‑CGGTAAAACCAGTAAAC‑GGAAAAACTGGCA‑GGAAGTGGAGTAAAAATTACGGATGGCAGAGTATCGCCATCCGAATTCa < 1:532819/228‑1 (MQ=255) gTTAAAAGAACAGATGCTGGAACTGCTACAGCAGCGCGGCGCGCAGTACCCTGCCGAGCATAACGTCGGTCATTTGTATAAAGCACCGGAGACGTTGCAGAAGTTCTATCGCGAGAACGATCCGACCAACAGCATGAATCCGGGGAT‑CGGTAAAACCAGTAAAC‑GGAAAAACTGGCA‑GGAAGTGGAGTAAAAATTACGGATGGCAGGGTATCGCCATCCGAATTCACt > 2:415382/1‑228 (MQ=255) cAGATGCTGGAACTGCTACAGCAGCGCGGCGCGCAGTACCCTGCCGAGCATAACGTCGGTCATTTGTATAAAGCACCGGAGACGTTGCAGAAGTTCTATCGCGAGAACGATCCGACCAACAGCATGAATCCGGGGAT‑CGGTAAAACCAGTAAAC‑GGAAAAACTGGCA‑GGAAGTGGAGTAAAAATTACGGACGGCAGAGTATAGCCATCCGAATTAACTTAATCGttt > 2:377899/1‑226 (MQ=255) aggtgcgtgaccTGCCAAAGCAGCGCGGCGCGCAGTTCCCGGCCGAGCATAACGTCGGTCATTTGTATAAAGCACCGGAGACGTTGCAGAAGTTCTATCGCGAGAACGATCCGACCAACAGCATGAATCCGGGGAT‑CGGTAAAACCAGTAAAC‑GGAAAAACTGGCA‑GGAAGTGGAGTAAAAATTACGGATGGCAGAGTATCGCCATCCGAATTCACTTAATCGTTCt < 2:83864/216‑1 (MQ=255) aTGCTGGAACTGATACAGCAGCGCGGCGCGCAGTTCCCTGCCGAGCATAACGTCGGTCATTTGTATAAAGCCCCGGAGACGTTGCAGAAGTTCTATCGCGAGAACGATCCGACCAACAGCATGAATCCGGGGAT‑CGGTAAAACCAGTAAAC‑GGAAAAACTGGCA‑GGAAGTGGAGTAAAAATTACGGATGGCAGAGTATCGCCATCCGAATTCACTTAATCGTTCtgtg < 2:485205/228‑1 (MQ=255) ggAACTGCTACAGCAGCGCGGCGCGCAGTACCCTGCCGAGCATAACGTCGGTCATTTGTATAAAGCACCGGAGACGTTGCAGAAGTTCTATCGCGAGAACGATCCGACCAACAGCATGAATCCGGGGAT‑CGGTAAAACCAGTAAAC‑GGAAAAACTGGCA‑GGAAGTGGAGTAAAAATTACGGATGGCAGAGTATCGCCATCCGAATTCACTTAATCGTTATGTGCCGt > 2:533891/1‑227 (MQ=255) aagtgtaaaaaaagacagcccAGTACCCGGCCGATCATAACGTGCGTCATTGTGAAAAAGCCCCGGAGACGTTGGAGAAGTTCTAGCGAGACAACGATCCGACCAACAGCAAGAATCCGGGGAT‑CGGTAAAACCAGTAAAC‑GGAAAAACTGGCA‑GGAAGTGGAGTAAAAATTACGGATGGCAGAGTCTCGCCATCCGAATTCACTTAATCGTTCTGTGCCGTCGGcc < 1:27997/207‑1 (MQ=255) taaagcaggcgggcgcgCCGTACCCTGCCGAGCATAACGGCGGTCATTTGTATAAAGCACCGGAGACGTTGCAGAAGTTCTATCGCGAGAACGATCCGACCAAAAGCATGAATCCGGGGAT‑CGGTAAAACCAGTAAAC‑GGAAAAACTGGCA‑GGAAGTGGAGTAAAAATTACGGATGGCAGAGTATCGCCATCCGAATTCACTTAATCGTTCTGTGCCGTCTGCCccgc < 2:479143/217‑1 (MQ=255) cagcGGGGCGCGCAGGACCCTGCCGAGCATAACGTCGGTCATTTGTATAAAGCACCGGAGACGGTGCAGAAGTTCTATCGCAAGAACGATCCGACCAACAGCAGGAATCCGGGGAT‑CGGTAAAACCAGTAAAC‑GGAAAAACTGGCA‑GGAAGTGGAGTAAAAATTACGGATGGCAGAGTATCGCCATCCGAATTCACTTAATCGTTCTGTGCCGTCTGCCccgccgcc < 2:289417/227‑1 (MQ=255) gcggcgcgCAGTACCCTGCCGAGCATAACGTCGGTCATTTGTATAAAGCACCGGAGACGTTGCAGAAGTTCTATCGCGAGAACGATCCGACCAACAGCATGAATCCGGGGAT‑CGGTAAAACCAGTAAAC‑GGAAAAACTGGCA‑GGAAGTGGAGTAAAAATTACGGATGGCAGAGTATCGCCATCCGAATTCACTTATTCGTTCTGTGCCGTCTGCACCGCCGCGGCCAt > 2:94513/1‑228 (MQ=255) gCCGAGCATAACGTCGGTCATTTGTATAAAGCACCGGAGACGTTGCAGAAGTTCTATCGCGAGAACGATCCGACCAACAGCATGAATCCGGGGAT‑CGGTAAAACCAGTAAAC‑GGAAAAACTGGCA‑GGAAGTGGAGTAAAAATTACGGATGGCAGAGAATCGCCATCCGAATTCACTTAATCGTTCTGTGCCGTTTGCCCCgccgccgccctgcctcttatacccatct > 2:27997/1‑209 (MQ=255) cGAGCATAACGTCGGTCATTTGTATAAAGCACCGGAGACGTTGCAGAAGTTCTATCGCGAGAACGATCCGACCAACAGCATGAATCCGGGGAT‑CGGT‑AAACCAGTAAAC‑GGAAAAACTGGCA‑GGAAGTGGAGTAAAAATTACGGATGGCAGAGTATCGCCATCCGAATTCACTTAATCGTTCTGTGCCGTCTGCCCCCCCGCCGCCATTTGGGCGGCTTTTTGtttt > 2:61024/1‑227 (MQ=255) aGCATAACGTCGGTCATTTGTATAAAGCACCGGAGACGTTGCAGAAGTTCTATCGCGAGAACGATCCGACCAACAGCATGAATCCGGGGAT‑CGGTAAAACCAGTAAAC‑GGAAAAACTGGCA‑GGAAGTGGAGTAAAAATTACGGATGGCAGAGTATCGCCATCCGAATTCACTTAATCGTTCTGTGCCGTTTGCCCCACCGCCGCCATTTGGGCGGctttttcttttt > 2:599653/1‑227 (MQ=255) aGCATAACGTCGGTCATTTGTATAAAGCACCGGAGACGTTGCAGAAGTTCTATCGCGAGAACGATCCGACCAACAGCATGAATCCGGGGAT‑CGGTAAAACCAGTAAAC‑GGAAAAACTGGCA‑GGAAGTGGAGTAAAAATTACGGATGGCAGAGAATCGCCATCCGAATTCACTTAATCGTTCTGTGCCGTCCGCCCCGCCGCCGCCATTTGGGGCGCTtttttttttt > 1:377438/1‑227 (MQ=255) cATAACGTCGGTCATTTGTATAAAGCACCGGAGACGTTGCAGAAGTTCTATCGCGAGAACGATCCGACCAACAGCATGAATCCGGGGAT‑CGGTAAAACCAGAAAAC‑GGAAAACCAGGCA‑GGAAGGGGAATATAAATTACGGAAGGCAGCGGAACGCCAACCGGATTCACTTAATAGTTCTGTGCCGTCTGCCCCGCCCCCGCCATTTGGGCGGCTTTTTGttttt > 1:699751/1‑225 (MQ=255) aaGCACCGGGGCCGTTGCAGAAGTTCTATCGCGAGAACGATCCGACCAACAGCATGAATCCGGGGAT‑CGGTAAAACCAGTAAAC‑GGAAAAACTGGCA‑GGAAGTGGAGTAAAAATTACGGATGGCAGAGTATCGCCATCCGAATTCACTTAATCGTTCTGTGCCGTCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGca < 2:530714/227‑1 (MQ=255) acGGAGACGTTGCAGGAGTTCGATCGCGAGAACGATCCGACCAACAGCATGAATCCGGGGAT‑CGGTAAAACCAGTAAAC‑GGAAAAACTGGCA‑GGAAGTGGAGTAAAAATTACGGATGGCAGAGTATCGCCATCCGAATTCACTTAATCGTTCTGTGCCGTCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCa < 2:401587/227‑1 (MQ=255) cGGAGACGTTGCAGAAGTTCTATCGCGAGAACGATCCGACCAACAGCATGAATCCGGGGAT‑CGGTAAAACCAGTAAAC‑GGAAAAACTGGCA‑GGAAGTGGAGTAAAAATTACGGATGGCAGAGTATCGCCATCCGAATTCCCTTAATCGTTCTGTGCCGCCGTCCCCGCCCCCGCCCTTTGGGCGGCTTTTTTTTTTTTAATGCTCacacccgctaccgggccaggcct > 1:532211/1‑206 (MQ=255) aCGTTGCAGAAGTTCTATCGCGAGAACGATCCGACCAACAGCATGAATCCGGGGAT‑CGGTAAAACCAGTAAAC‑GGAAAAACTGGCA‑GGAAGTGGAGTAAAAATTACGGATGGCAGAGTATCGCCATCCGAATTACCTTAATCGTTCTGTGCCGTCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTTTAGCTCAAACCTGCTGCCGGCACAGGCAtacctt > 2:354843/1‑223 (MQ=255) tGCAGAAGTTCTACAGCGAAAAAGATCCGACCAACAGCATGAATCCGGGGAT‑CGGTAAAACCAGTAAAC‑GGAAAAACTGTCA‑GGAAGTGGAGTAAAAATTCCGGATGGCAGAGTATCGCCATCCGAATTCACTTAATCTTTCTGTGCCGTCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTAcc < 1:430476/228‑1 (MQ=255) tGCAGAAGTGCTATCGCGAGAACGATCCGGCCAACAGCATGAATCCGGTGAT‑CGGTAAAACCAGTAAAC‑GGAAAAACTGGCA‑GGAAGTGGAGTAAAAATTACGGATGGCAGAGTATCGCCCTCCGAATTCACTTAATCGTTCTGTGCCGTCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTAc < 2:679290/227‑1 (MQ=255) aaaaaGCACGAAACCGGGGAC‑AGGAAAACCCAGTAAAC‑GAAAAACCTGGCA‑GGAAGTGGTGTAAAAATTGCGGATGGCAGAGTATCGCCATCCTAATCCCCTTAATCGTTCTGTTCCGTCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGGTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCa < 1:415382/224‑1 (MQ=255) tggagtcgggggCT‑CGGT‑AACCAAGGAAAC‑GGAAAAACGGGCA‑GATAGTGGAGAAAAAATACGGGGTGGCAGACTTTCGCCACCCGATTTCCCTTAATCGTTCTGGGCCGTCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATCGGCaaa < 1:61024/220‑1 (MQ=255) tGAATCCGGGGAT‑CGGTAAAACCAGTAAAC‑GGAAAAACTGGCA‑GGAAGTGGAGTAAAAATTACGGATGGCAGAGTATCGCCATCCGAATTCACTTAATCGTTCTGTGCCGTCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGGCCAGGCATCACTTTACCGGTTTCAATCCAGGTACCCCGGCGCCTGGCacaggaaaa > 1:172319/1‑220 (MQ=255) tGAATCCGGGGAT‑CGGTAAAACCAGTAAAC‑GGAAAAACTGGCA‑GGAAGTGGAGAAAAACTTACGGATGACAGAGTATAGCCAACCGAATTCACTTAATCGTTTGCGGCCGGCTGCCCCGCCGCCGCCATTTGGGCTGCTTTTTTTTTTTTCTTGTTCACCGCCGACGCCGGCACAGTGTTCACTTTTCCGGTTTTCATCTAGCTCCGCAAGCGCGTGGcccccgcaac > 1:186556/1‑219 (MQ=255) aggaccGGGGGTCCGGAAAACCCAGTAAAC‑AGAAAACCTGGAA‑GGAATGTGATCAAAAATTGCGGATGGCGTAGCATCGCCCTCCGAATGCACTTAATCGTTCTGTGCCGTCGGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTTGCATCGGCaaa < 1:239060/224‑1 (MQ=255) gggAT‑CGGTAAAACCAGTAAAC‑GGAAAAACTGGCA‑GGAAGTGGAGTAAAAATTACGGATGGCAGAGTATCGCCATCCGAATTCACTTAATCGTTCTGTGCCGTCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCCCAGGCATCCCTTTACCGGTTTCAATCCAGGGACGCAGGCGGCTGGCATCTGTAAAATGGGcat > 2:239060/1‑228 (MQ=255) aagggTAAAAACCGGAAACAGGAAAAACTGGAA‑GGAAGTGGAGTAAAAATTCCGGATGGCGAGGTTACCCCACCCGAATTCACTTATTCGTTCGTGGCCGTTTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATCGGCAAAATGGGtata < 1:199247/224‑1 (MQ=255) gTAAAACCAGTAAAC‑GGAAAAACTGGCA‑GGAAGTGGAGTAAAAATTTCGGATGGCAGAGTATCGCCATCCGAATTCACTTAACCGTTCTGTGCCGTCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAgg < 2:620127/188‑1 (MQ=255) ccAGTAAAC‑GGAAAAACTGGCA‑GGAAGTGGAGTAAAAATTACGGAAGGCAGGGTATCGCCATCCGAATTCACTTAATCGTTCTGGGCCGGCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGTTCCACGCCGCGGCCGCCCCAGGCATCCCTTTGCCGTTTTTAATCCAGGTACGCAGGCGGCCTGGACCGGCAAAATGGGGATATTTTCCAAAccc > 1:308528/1‑226 (MQ=255) gtgaaaG‑GGAAAAACTGGCA‑GGAGGTGGAGTAAAAATTACGGATGGCAGGGTCACGCCATCCGATTTCTCTTATTCGTTTTTGGCGGTCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTTGTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATCGGCAAAATGGGTATATTTGCCAAAcgcg < 1:591919/224‑1 (MQ=255) ggaaaaC‑GG‑AAAACTGGGAGGGAAGGGGGTTAAAATTTCCGGAGGGCAGCGTAGCGCCAGCCGATTTCCCTGATCTGTTCTGTGCCGGCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATCGGCAAAATGGGTATATTTGCCAAACGCGt < 1:354843/225‑1 (MQ=255) gTAAAC‑GGAAAAACTGGCA‑GGAAGTGGAGTAAAAATTACGGATGGCAGAGTATCGCCATCCGAATTCACTTAATCGTTCTGTGCCGTCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATCGGCAAAATGGGTATATTTGCCAAACGCGt < 2:452172/227‑1 (MQ=255) gTAAAC‑GGAAAAACTGGCA‑GGAAGTGGAGTAAAAATTACGGATGGCAGAGTATCGCCATACGAATTCACTTAATCGTTCTGTGCCGTCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCATTCCAGGTACGCAGGGGGCTGGCATCGGCAAAATGGGTATATTTGCAAACCGCGt > 2:289964/1‑227 (MQ=255) tAAAC‑GGAAAAACTGGCA‑GGAAGTGGAGTAAAAATTACGGATGGCAGAGTATCGCCATCCGAATTCACTTAATCGTTCTGTGCCGTCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCCCAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATAGGCAAAATggggac > 2:199247/1‑208 (MQ=255) aC‑GGAAAACCTGGCA‑GGAAGTGGAGTAAAAATTACGGATGGCAGAGTATCGCCATCCGAATTCCCTTAATCGTTCTGTGCCGTCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATCGGCAAAATGGGTATATTTGCCAAACGCGTCCAt < 2:308528/227‑1 (MQ=255) aaaaCTGGCA‑GGAAGTGGAGTAAAAATTACGGATGGCAGAGTATCGCCATCCGAATTCACTTAATCGTTCTGTGCCGTCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATCGGCAAAATGGGTATATTTGCCAAACGCGTCCATCACTAc < 2:377438/228‑1 (MQ=255) cggaatgtgggTAAAAATTACGGAAGCACGAGTACCCCCTCCCAAATTCCTTTACTCTTTTTGGGCCTTCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATCGGCAAAATGGGTATATTTGCCAAACGCGTCCATCACTACCAGCGC‑CAc < 1:674019/218‑1 (MQ=255) gaatgggAGTAAAAAGTCCGGATGGCAGAGTATCGCCATCCGAATTCACTTAATCGTTCTGTGCCGTCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATCGGCAAAATGGGTATATTTGCCAAACGCGTCCATCACTACCAGCGC‑CACCg < 2:35934/223‑1 (MQ=255) aggggATTAAAAATTACGGATGGCAGGGGTTCGCCATCCGAATTCCCTTAATCGTTCTGTGCCGTCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATCGGCAAAATGGGTATATTTGCCAAACGCGTCCATCACTACCAGCGC‑CACCGGt < 2:532211/225‑1 (MQ=255) aGTGCATTAAAAATTACGGGTGGGAAAGTATCGGCATCGGAATTTCATTAATCGTTCTGTTCCGTCTGCCACGGCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATCGGCAAAATGGGTATATTTGCCAAACGCGTCCATCACTACCAGCGC‑CACCGGt < 2:234595/228‑1 (MQ=255) ggcagaaaaaTTGCGGATGGCAGTGTAGCGCCAACCGAATTCACTTAATCGTTCTGTGCCGTCGGCCCCGCCGCCGCCATCTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATCGGCAAAATGGGTATATTTGCCAAACGCGTCCATCACTACCAGCGC‑CACCGGTtta < 2:1404/223‑1 (MQ=255) gAGTAAAAATTACGAATGGCAGAGTATCGCCATCCGAATTCACTTAATCGTTCTGTGCCGGCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCACCGCTGCTGCCGGCCCGGGCATCACTTTTCATGTTTCTATCCACGTACGCAGCCGTCTGGCATCGGCAAAATGGGTATATTTTCCACACCCGGCCATCACTCCCATCCCACACCGGttaa > 1:332343/1‑226 (MQ=255) aaaaTTACGGATGGCAGAGTATCGCCATCCGAATTCACTTAATCGTTCTGTGCCGTCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCCGGCGGCTGGCATCGGCAAACTGGGTATCTTTGCCAAACCCGTCCATACCTACCCGCGC‑CACCGGTTTattatt > 2:222017/1‑227 (MQ=255) aaTTGCGGATGGCAGAGTATCCCCATCCGAATTCACTTAATCGTTCTGTGCCGTCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATCGGCAAAATGGGTATATTTGCCAAACGCGTCCATCACTACCAGCGC‑CACCGGTTTATTATTGa < 2:324112/227‑1 (MQ=255) cggattgcccccctCCGATTTCCCTTATTCGTTTTTTTCCGTCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTGTTTATAGCTCAACGCTGGCGCCGGCACAGGCATAACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTAGCATCGGCAAAATGGGTATATTTGCCAAACGCGTCCATCACTACCAGCGC‑CACCGGTTTATTATTGATAACCGTACGCAt < 1:533891/215‑1 (MQ=255) cAGAGTCTCGCCATCCGATTTCACTTAATCGTTCTGGCCCGGCTGCCCCGCCGCCGCCATTTTGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATCGGCAAAATGGGTATATTTGCCAAACGCGTCCATCACTACCAGCGC‑CACCGGTTTATTATTGATAACCGTACGCAt < 2:188569/228‑1 (MQ=255) ccgttttCAGTTAATAGTTCTTCGCCGTCTGCCCCCCCCCCGCCCTTTGGGCGGCTTTTTTTTTTTTAAAGCTCACCGCTGCTGGCGGCACAGGCATCACTTTACCGGTTTCaagc < 2:615022/111‑3 (MQ=255) cGAATTCACTTAATCGTTCTGTGCCGTCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATCGGCAAAATGGGGATATTTGCCAAACGCGTCCATCACTCCCAGCGC‑CCCCGGGTTATTATTGATAACCGTACGCATCACCAGACaaggtcc > 2:670284/1‑223 (MQ=255) aTTCTCTTAAGCGTTCTTGCCCGCCTGCCCCCCCGTCGCCATTTGGGCGGTCTTTTGTTTTGTATAGCTCAACGGTGCTGCCGGCACAGGCATCACTTTACCGGTTGCAATCCAGGTACGCAGGCGGCTGGCATCGGCAAAATGGGTATATTTGCCAAACGCGTCCATCACTACCAGCGC‑CACCGGTTTATTATTGATAACCGTACGCATCACCAGACAATGGCccgc < 2:618194/228‑1 (MQ=255) | GCGTTAAAAGAACAGATGCTGGAACTGCTACAGCAGCGCGGCGCGCAGTACCCTGCCGAGCATAACGTCGGTCATTTGTATAAAGCACCGGAGACGTTGCAGAAGTTCTATCGCGAGAACGATCCGACCAACAGCATGAATCCGGGGAT‑CGGTAAAACCAGTAAAC‑GGAAAAACTGGCA‑GGAAGTGGAGTAAAAATTACGGATGGCAGAGTATCGCCATCCGAATTCACTTAATCGTTCTGTGCCGTCTGCCCCGCCGCCGCCATTTGGGCGGCTTTTTGTTTTTTATAGCTCAACGCTGCTGCCGGCACAGGCATCACTTTACCGGTTTCAATCCAGGTACGCAGGCGGCTGGCATCGGCAAAATGGGTATATTTGCCAAACGCGTCCATCACTACCAGCGC‑CACCGGTTTATTATTGATAACCGTACGCATCACCAGACAATGGCCCGC > NC_000913/2223707‑2224157 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |