| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,411,023 | T→C | 11.6% | S110G (AGT→GGT) | yfbS ← | putative transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,411,023 | 0 | T | C | 11.6% | 164.9 / 2.5 | 69 | S110G (AGT→GGT) | yfbS | putative transporter |
| Reads supporting (aligned to +/- strand): ref base T (32/27); new base C (3/6); total (35/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.99e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01 | |||||||||||
ACCAGGCCAATAGGTGTTACGCTAAAGAAACTGAAGCCGTGATAGCCTTCACGCAGCAATTCACTGTTGACTACCAGGTTCGGCGGCGTCGCCACCAGCGTCATCATGCCGCTAATCAGCCCGGCAAAACTTAACGGCATCATCAGACGTGACGGCGACGTTTGCATACGCATGGCAACGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGTACGGACCAAACCATCGCCAATAATAAACAAGGCGGCAATCAGGACAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTC‑AGCGTTCCGCTTAATGCAAACGCGA > NC_000913/2410800‑2411247 | aCCAGGCCAATAGGTGTTACGCTAAAGAAACTGAAGCCGTGATAGCCTTCACGCAGCAATTCACTGTTGACTACCAGGTTCGGCGGCGTCGCCACCAGCGTCATCATGCCGCTAATCAGCCCGGCAAAACTTAACGGCATCATCAGACGTGACGGCGACGTTTGCATACGCATGGCAACGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACTCAt > 2:116760/1‑227 (MQ=255) gtTACGCTAAAGAAACTGAAGCCGTGATAGCCTTCACGCAGCAATTCACTGTTGACTACCAGGTTCGGCGGCGTCGCCACCAGCGTCATCATGCCGCTAATCAGCCCGGCAAAACTTAACGGCATCATCAGACGTGACGGCGACGTTTGCATACGCATGGCAACGCTTAACACCACGGGCATAAAGATAGCGACAACGCCGGTTGAACCCATAAACGGGCCAACcccc > 2:428875/1‑228 (MQ=255) aaGAAACTGAAGCCGTGATAGCCTTCACGCAGCAATTCACTGTTGACTACCAGGTTCGGCGGCGTCGCCACCAGCGTCATCATGCCGCTAATCAGCCCGGCAAAACTTAACGGCATCCTCATACGTGACGCCGCCGGTTGCATACGCATGGCCACGCTTAACACCACGGGAATAAAGACAGGGGCAAACCCGGTTGAACCCAAAAACACGCCAAACCCCGCAACggcg > 1:285817/1‑226 (MQ=255) aaggctcgATAGCCGCCACGCAGCAATTCACTGGTGACTACCAGGTCCGGCGGCGTAGCCACCAGCGTCATCATGCCGCTAATCAGCCCGGCAAAACTTAACGGCATCATCAGACGTGACGGCGACGTTTGCATACGCATGGCAACGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATcaac < 2:285817/221‑1 (MQ=255) aGCCGTGATAGCCTTCACGCAGCAATTCACTGTTGACTACCAGGTTCGGCGGCGTCGCCACCAGCGTCATCATGCCGCTAATCAGCCCGGCAAAACTTAACGGCATCATCAGACGTGACGGCGACGTTTGCATACGCATGGCAACGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAACCCCGCGACGGCCAGCATcaaca > 2:15919/1‑228 (MQ=255) aGCCGTGATAGCCTTCACGCAGCAATTCACTGTTGACTACCAGGTTCGGCGGCGTCGCCACCAGCGTCATCATGCCGCTAATCAGCCCGGCAAAACTTAACGGCATCATCAGACGTGACGGCGACGTTTGCATACGCATGGCAACGCTTAACACCACGGGAACAAAGATAGCGCAAACGCCGGTTTCACTCATAAACGCGCCAAGCCCCCCGACGGCCAGCATcaaca > 1:586061/1‑228 (MQ=255) tccccccaccaATTCTCTTTTGACCACCAGGTTCGGCGGCGGCGCCCCCAGCGTAATCATGCCGCTAATCAGCCCGGCAAAACTTACCGGCATCATCAGACGTGACGGCGACGTTTGCATACGCATGGCAACGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACAtttt < 1:355764/219‑1 (MQ=255) cACGCAGCAATTCACTGTTGACTACCAGGTTCGGCGGCGTCGCCACCAGCGTCATCATGCCGCTAATCAGCCCGGCAAAACTTAACGGCATCATCAGACGTGACGGCGACGTTTGCATACGCATGGCACAGCTTAACACCACGGGAATAAAGATAGCGGCAACGCCGGTTTAACTCATAAACACTCCAAACCCCACCACAGGCAACACACACAAAACCAAACttttt > 1:401644/1‑226 (MQ=255) aCGCAGCAATTCACTGTTGACTACCAGGTTCGGCGGCGTCGCCACCAGCGTCATCATGCCGCTAATCAGCCCGGCAAAACTTAACGGCATCATCAGACGGTGCGGCGACGTTTGCATACGCCTGGCAACCCTTAACACCCCGGGAATAAACATAGCGACAACCCCGGGTGAACTCATAAACCCCCCAAGCCCCCGCACGGTACACAACACCAAAACCaaaaaattac > 1:670349/1‑219 (MQ=255) cagcaATTCACTGTTGACTACCAGGGTCGGCGGCGTCGCCACCAGCGTCATCATGCCGCTAATCAGCCCGGCAAAACTTAACGGCATCATCAGACGTGACGGCGACGTTTGCATACGCATGGCAACGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACCCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGAttt < 2:492349/227‑1 (MQ=255) tCACTGTTGACTACCAGGTTCGGCGGCGTCGCCACCAGCGTCATCATGCCGCTAATCAGCCCGGCAAAACTTAACGGCATCATCAGACGTGACGGCGACGTTTGCATACGCATGGCAACGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACCCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACCAttt > 2:8644/1‑227 (MQ=255) ttGACTACCAGGTTCGGCGGCGTCGCCACCAGCGTCATCATGCCGCTAATCAGCCCGGCAAAACTTAACGGCATCATCAGACGTGACGGCGACGTTTGCATACGCATGGCAACGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACCATTGCCCGc > 2:549470/1‑227 (MQ=255) ttGACTACCAGGTTCGGCGGCGTCGCCACCAGCGTCATCATGCCGCTAATCAGCCCGGCAAAACTTAACGGCATCATCAGACGTGACGGCGACGTTTGCATACGCATGGCAACGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAAAGCGCCAAGCCCCGCGACGGTAAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGc > 2:529734/1‑227 (MQ=255) aCTACCAGGTTCGGCGGCGTCGCCACCACCGACATCATGCCGCTAATCAGCCCGGCAAAACTTAACGGCATCCTCAGACGTCACGGCGACATTTGCCTACGCCTGACAACGCTTAACCCCACGGGAATAAAGATAGCTACAACGCCGGTGGACCTCAAAACCCCACCCATCCACACTACGTACAGCGCCAACAGAACCAACATTTTGATATCACCACTGCCCGCAACt > 1:238987/1‑228 (MQ=255) aCTACCAGGTCCGGCGGCGTCGCCACCAGCGTCATCATGCCGCTAATCAGCCCGGCAAAACTTAACGGCATCATCAGACGTGACGGCGACGTTTGCATACGCATGGCAACGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGTTCCGCATCAACAAAACCAACATTTTGATTTCACAATTGCCCGCAACt > 2:638147/1‑228 (MQ=255) cgggTGCGGCGGCGCCGCCACCAGCGTCATCAGGCCGATAAGCCGCCAGGCAAAACTTAACGGCATCATCAGACGTGACGGCGACGTTTGCATACGCATGGCAACGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACCCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGAc < 1:8644/226‑1 (MQ=255) aGGTTCGGCGGCGTCCCCACCAGCGTCATCATGCCGCTAATCAGCCCGGCAAAACTTAACGGCAGCATCAGACGTGACGGCGACGTTTGCATACGCATGGCAACGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGAcc < 2:586061/228‑1 (MQ=255) ttCTGCGGCGTCGCCACCAGCGTCATCATGCCGCTAATCAGCCCGGCAAAACTTAACGGCATCATCAGACGTGACCGCGACGTTTGCATACCAATGGCAACGCTTAACACCACGGGAATAAAGCTAGCGAAAAACCCGGTGGATCTCATACACGCGCCAAGCCCCCCTAAGGTCACCGTCAACAAACCCACCATTTTGGTTTAACAATTCCCCGCACCCTTAACCaa > 1:383969/1‑226 (MQ=255) ggcggccgccgccccaGGGTCAGCATGACGCTAATCAGCCGGGCAAAACTTAACGGCATCATCAGACGTGACGGCGACGTTTGAATACGCATGGCCACGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCAt < 1:59345/215‑1 (MQ=255) cGTCCTCGTGCCGCTAACCATCCCCGCAAAGCTTAACGGGACTATCAGGCCTGACGGCGACGTTTGCATACGCATGGCATCGCTTAACACCACGGGAATAAAGAGAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCCCTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGc < 1:529734/228‑1 (MQ=255) cGTCATCATGCCGCTAATCAGCCCGGCAAAACTTAACGGCATCATCAGACGTGACGGCGACGTTTGCATACGCATGGCAACGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAAAATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTCCGGTGGc > 2:83579/1‑228 (MQ=255) atcatTCCGCGAACTCGCCCGGCAAAACTTAACGGGCTCATCGCACTTGCAGGCCAATTTGGCATAACGATGGCAACGCGTAAACCCACGTGAATAAAGAGAACCACAACGCCCGTTGACCCCAGAAACGCTCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTGTGACCAGCCATGTTCCGATTACGGTGGCAaca < 1:377538/228‑1 (MQ=255) atcagGCCGCTAATCAGCCCGGCAAAACTTAACGGCATCATCAGACGTGACGGCGACGTTTGCATACGCATGGCAACGCTTAACACCACGGGAATAAAGACAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAaca < 2:211286/228‑1 (MQ=255) ccttGCCCCTAATCAGCCCGGAAAAACTTACAGGCATCACCAGACGTGAAGGCGACGTTTGCATACGCCTGGCAACGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAacac < 1:116760/225‑1 (MQ=255) atGCCGCTAATCAGCCCGGCAAAACTTAACGGCATCATCAGACGTGACGGCGACGTTTGCATACGCATGGCAACGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGCCAGCATCAACCAAACCAACAATTTGATTTCACTATTGCCCGCAACTTTGACCAACCATGTTCCCCTTACGTGTGCAAAACCg > 1:145488/1‑228 (MQ=255) ccGTTAATCAGGCCGGCAAAACTTAACGGCATCAGCAGACGTGACGGCGACGTTTGCATACGCATGGCCACGCTTAAGTGCACGGGAATAAAGATAGCGACAACGCCGGTTTAACTCATAAACGCGCCAAGCCCCGCGACTGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGTa < 2:696957/228‑1 (MQ=255) ccGGTAACCCGCCCGGCAAAACCTAACGGCAACATCAGACGTGACGGCGACGTTTGCATACGCATGGCAACGCTTAACACCACGGGAATAAAGATCGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGTa < 2:187638/228‑1 (MQ=255) ccGCTAACCCCCCCGGAAAAAATTAACGGCACCATCAACCGTGGAGGGGACGGTTGCATACGCATGGCAACGCTTAAAACCACGGGAATAAAGATGGCGGCAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGTa < 1:627373/228‑1 (MQ=255) cTAATCAGCCCGGCAAAACTTAACGGCATCATCAGACGTGACGGCGACGTTTGCATACGCATGGCAACGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCCTGTTCCCATTACGGTTGCAACACCGGTAct > 2:391721/1‑226 (MQ=255) cccGGCAAAACTTAACGGCATCATCAGACGTGACGGCGACGTTTGCATACGCATGGCAACGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCATCCATGTTCCCAttca > 2:304750/1‑199 (MQ=255) aaaagagacagcatcaGGCGTGACGGGGACGTTGGCATACGCATGGCAACCCATAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGTACGGACCAAACCATCGCCaata < 1:434220/217‑1 (MQ=255) atcatcAGACGTGACGGCGACGTTTGCATACGCATGGCAACGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCAATTACGGTGGCAAAACCGGTACGGACCAAACCATCGCCAATAATAAACAAg > 2:162419/1‑228 (MQ=255) tcatcaGACGTGACGGCGACGTTTGCATACGCATGGCAACGCTTAACACCACGGGAATCAAGATAGCGACAACGCCGGTTGAACTCATAAACCCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAAAATTTTGATTTCACTATTGCCCGCCACCTTGACCACCCCAGTTCACATTACGTTAGCACAACCGGCACGGACCAAACACTCGCAAAAAAAAAACaaag > 1:314120/1‑226 (MQ=255) accagacggaaagggacagTTTGCCGACGCATGGAAACGCTTAAAACCACGGGAAAAAAGATAGCGACAACGCCGGTTCAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGTACGGACCAAACCATCGCCAATAATAAACAAggcg < 1:139914/210‑1 (MQ=255) ccGGCGACGTTTGAAAACGCCAGGCAAACCTTAACACCCCGGGAATAAAGATAGCGACCACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGTACGGACCAAACCATCGCCAATAATAAACAAGGCGGCAATCAGGa < 2:670349/227‑1 (MQ=255) aCGGCGACTTTTGCATCCGCATGGACACGAATACCCACACGGGAATAAAGATAGCGAAAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATGGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGTACGGACCAAACCATCGCCAATAATAAACAAGGCGGCAATCAGGa < 2:539945/228‑1 (MQ=255) aCGGCGACGTTTGCATACGCATGGCAACGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGTACGGACCAAACCATCGCCaat > 2:434220/1‑205 (MQ=255) aCGGCGACGTTTGCATACGCATGGCAACGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGTACGGACCAAACCATCGCCAATAATAAACAAGGCGGCAATCCggc > 2:644033/1‑227 (MQ=255) ccgggatgttcgccaacggctGGCAACGCTTAACCCCACGGGAATAAAGGAAGCCACAACGCTGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGTACGGACCAAACCATCGCCAATAATAAACAAGGCGGCAATCAGGa < 1:96415/207‑1 (MQ=255) ggCGACGTTTGCATACGCATGGCAACGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGTACGGACCAAACCATCGCCAATAATAAACAAGGCGGCAATCAGGACa < 2:145488/228‑1 (MQ=255) gACGTTTGCATACGCATGGCAACGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGTACGGACCAAACCATCGCCAATACTAAACAAGGCGGCAATCAGGACAAc > 2:96415/1‑227 (MQ=255) aCGGTTGCATACGGATGGCAACGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACCCATAAACGCTCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATGTCACTATTGCCCGCAACGTTGACCAGCCATGTTCCCATTACGGTGGCAACCCCGGTACGGACCAAACCATCGACAATAATAAACAAGGCGGCAATCAGGACAACGt < 2:211883/228‑1 (MQ=255) cGTTTGCATACGCATGGCAACGCTTAACCCCACGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCACCAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGTACGGACCAAACCATCGCCAATAATAAACAAGGCGGCAATCAGGACAACg < 2:401644/226‑1 (MQ=255) cGTTTGCATACGCATGGCAACGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGTTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGTACGGACCAAACCATCGCCAATAATAAACAAGGCGGCAATCAGGACAACGtt < 2:314120/228‑1 (MQ=255) cGCATGGCAACGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGTACGGACCAAACCCTCGCCAATCATAAACAAGCCGGCAATCAGGCCAACGTTAGGATCAGaa > 2:402432/1‑228 (MQ=255) cATGGCAACGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTAAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGTCAGGACCAAACCATCGCCAATAATAAACAAGGCGGCAAACAGACAAACGTAAGAATCAaaaa > 1:18692/1‑227 (MQ=255) cGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGTACGGACCAAACAATCGCCAATAATAAACAAGGCGGCAAACAGAACACCGTTAGGGTCAGAAAAGCCGGaaa > 2:212077/1‑228 (MQ=255) ctgaaccacaagggAAAAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGTACGGACCAAACCATCGCCAATAATAAACAAGGCGGCAATCAGGACAACGTTAGGATCAGAAAAGCCGGAAAAt < 2:2301/217‑1 (MQ=255) aaCACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGTACGGACCAAACCATCGCCAATAATAAACAAGGCGCCAATCAGGCCAACGTTAGGATCAAAAAACCCGGAAAATACt > 2:247463/1‑228 (MQ=255) aaCACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATAAACAAAACCAACAACTTGATTTCACTATTGCCCGCAACTTTGACCAGCCAAGTTCCCATTACGGTGACCACACCGGTACGGACCACACCACCGCCAACAATAAAAAAGGCGGCAAACAGGACAACGTGAGAAAAAAAAAAAACGGaaaaaaa > 1:533079/1‑224 (MQ=255) caccacGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTa > 2:111792/1‑134 (MQ=255) cacGGGAATAAAGATAGCGACCACGACAGTTGAACCCATAACCGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGTACGGACCAAACCATCGCCAATAATAAACAAGGCGGCAATCAGGACAACGTTAGGATCAGAAAAGCCGGAAAATCCTTCTgg < 2:533079/228‑1 (MQ=255) cGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCAt > 2:202111/1‑119 (MQ=255) cGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGACATGTTCCCATTACGGTGGCAACACCGGTACGGACCAAACCATCGCCAATAATAAACAAGGCGGCCATCAGGACAACGTTAGGCACAGAAAAACCgacaaaaaacccttgga > 1:535918/1‑212 (MQ=255) tggAATAAATATAGCGACAACGCCGATTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTGTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGTACGGACCAAACCATCGCCAATAATAAACAAGGCGGCAATCAGGa < 2:661445/187‑1 (MQ=255) gggAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCCCTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGTACGGACCAAACCATCGCCAATAATAAACAAGGCGGCAATCAGGACAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGAc < 2:333401/228‑1 (MQ=255) gggAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTTCCCGCAACTTTGACCAGCCATg < 1:202111/119‑1 (MQ=255) gggAATAAAGATAGCGAAAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGTACGGACCAAACCATCGCCAATAATAAACAAGGCGGCAATCAGGACAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGAc < 2:153443/228‑1 (MQ=255) cggAATAAAGACAGCCAACACGCCGGTTGAACTCATAACCGGCCCAAGCCCCGAGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACGTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGTACGGACCAAACCATCGCCAATAATAAACAAGGCGGCAATCAGGACAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGAc < 1:83579/227‑1 (MQ=255) aaaaaagtgCGACACCCCCGGTTTACCTCATAACCGCGCCCCCCCCCGCGCCGTTCATCACCAACAAAGCCACCATTTTGAGTTCACTATTGCCCGCAACGTTGACCAGCCAGGTTCCCATTACGGTGGCAACACCGGTACGGACCAAACCATCGCCAATAATAAACAAGGCGGCAATCAGGACAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTC‑a < 1:428875/220‑1 (MQ=255) aGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGTTGCCAACACCGGTCCGGCACAAAACATCGCCAATAATAAACAGGGCGGCAATCGGAAAAACGTTAAGATCACAAAAGCCGAAAAAAACATccgacaggtccacctcacc > 1:49824/1‑210 (MQ=255) cGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACgg > 2:653/1‑45 (MQ=255) cGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTAGCTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGTCACGGTCCAAACCATCGCCAATAATAAACAAGGCGGCAATCAGGGCAACGATAGGACCAGCAAAGCAGGAAAATACtttctagaccgccaacgttcggg > 1:677566/1‑207 (MQ=255) gACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGt < 1:653/45‑1 (MQ=255) caaaCGCCGGTTGAACGTAAACACGCCCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAGCATGTTGATTTCACTATTGCCCGCAACTTTGACCAGCAATGTTCCCATTACGGTGGCAACACCGGTACGGACCAAACCATCGCCAATAATAAACAAGGCGGCAATCAGGACAACGTTAGGATCATAAAAGCCGGAAAATACTTCTGGGACTGTC‑AGCGTTCCGCtt < 2:697599/226‑1 (MQ=255) aCAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGTACGGACCAAACCATCGCCAATAATAAACAAGGCGGCAATCAGGACAACGTTAGGATCAGAAAAACCGGAAAAAACTTCTGGGAC‑GTCAAGCGTTCCGCta > 1:391665/1‑227 (MQ=255) cGCCGGGTGAACTCATAAACGCGCCAAACCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCGCTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGAACGGACCAAACCATCGCCAATAATAAACAAGGCAGCAAACAGGACACCGTTAGGACCAGAAAACCCGGAAAAAAATTCTGGGAccacaaacgtcccgcataaca > 1:303046/1‑208 (MQ=255) ggTTGAACCCATAAACGCGCCAAGCCCCGAGCCGGCCAGCATCAACAAAACCAACATTTTGATTTCCCCATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGTACGGACCAAACCATCGCCAATAATAAACAAGGCGGCAATCAGGACAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTC‑AGCGTTCCGCTTAATGCaaa < 2:677566/228‑1 (MQ=255) aaCTCAATAACGCGCCAAACCCCGCGGCGGGCAGGATCAAAAAAACCAACATTTTGATTTCACTAATGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGTACGGACCAAACCATCGCCAATAATAAACAAGGCGGCAATCAGGACAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTC‑AGCGTTCCGCTTAATGCAAACGCGa < 2:49824/228‑1 (MQ=255) | ACCAGGCCAATAGGTGTTACGCTAAAGAAACTGAAGCCGTGATAGCCTTCACGCAGCAATTCACTGTTGACTACCAGGTTCGGCGGCGTCGCCACCAGCGTCATCATGCCGCTAATCAGCCCGGCAAAACTTAACGGCATCATCAGACGTGACGGCGACGTTTGCATACGCATGGCAACGCTTAACACCACGGGAATAAAGATAGCGACAACGCCGGTTGAACTCATAAACGCGCCAAGCCCCGCGACGGTCAGCATCAACAAAACCAACATTTTGATTTCACTATTGCCCGCAACTTTGACCAGCCATGTTCCCATTACGGTGGCAACACCGGTACGGACCAAACCATCGCCAATAATAAACAAGGCGGCAATCAGGACAACGTTAGGATCAGAAAAGCCGGAAAATACTTCTGGGACTGTC‑AGCGTTCCGCTTAATGCAAACGCGA > NC_000913/2410800‑2411247 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |