| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC | NC_000913 | 3,429,830 | (TTC)3→2 | 2.7% | coding (190‑192/258 nt) | yrdB ← | DUF1488 family protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3429826 = | 112 (1.420) | 3 (0.040) | 3/396 | NT | 2.7% | coding (196/258 nt) | yrdB | DUF1488 family protein |
| ? | NC_000913 | = 3429822 | 107 (1.410) | coding (200/258 nt) | yrdB | DUF1488 family protein | |||||
GACGTAGAACCAGTTATAAAGCAATTGCAGGAGGAATTGTCCGCGTGAATCAGGCCATCCAGTTTCCGGACAGGGAAGAGTGGGACGAGAATAAAAAATGTGTATGTTTTCCCGCTCTCGTGAATGGTATGCAACTGACATGCGCGATCTCTGGCGAGAGTCTGGCGTATCGCTTTACTGGAGATACGCCAGAACAGTGGTTAGCGAGTTTTCGTCAGCATCGCTGGGACCTGGA‑A‑G‑AAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3430065‑3429826‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ga‑a‑g‑aagCGGAAAACTTAATTCAGGAACAAAGTGAAGATGATCAAGGCTGGGTCTGGTTACCCTGATCCAGATATTCGTCCTTCCATTTCACGTAATTATTCGCGGAATAGCGTAACCCAGCCTTCTCTTCATCACTTAACGGGCGGATCTGTTTGACGGGGCTACCGAGATACAGATATCCGCTCTCCAGCCGTTTATTTTGTGGGACCAGACTACCCGCACCAATCATCACATCATCTTC < NC_000913/3429822‑3429588 GACGTAGAACCAGTTATAAAGCAATTGCAGGAGGAATTGTCCGCGTGAATCAGGCCATCCAGTTTCCGGACAGGGAAGAGTGGGACGAGAATAAAAAATGTGTATGTTTTCCCGCTCTCGTGAATGGTATGCAACTGACATGCGCGATCTCTGGCGAGAGTCTGGCGTATCGCTTTACTGGAGATACGCCAGAACAGTGGTTAGCGAGTTTTCGTCAGCATCGCTGGGCCCTGGA‑A‑G‑AA > 2:522630/1‑239GACGTAGAACCAGTTATAAAGCAATTGCAGGAGGAATTGTCCGCGTGAATCAGGCCATCCAGTTTCCGGACAGGGAAGAGTGGGACGAGAATAAAAAATGTGTATGTTTTCCCGCTCTCGTGAATGGTATGCAACTGACATGCGCGATCTCTGGCGAGAGTCTGGCGTATCGCTTTACTGGAGATACGCCAGAACAGGGGTTAGCGAGTTTTCTTCAGCATCGCTGGGACCTGGAcaca > 2:283590/1‑235 AAAGCAATTGCAGGAGGAATTGTCCGGGTGAATCAGGCCATCCAGTTTCCGGACAGGGAAGAGTGGGACGAGAATAAAAAATGTGTATGTTTTCCCGCTCTCGTGAATGGTATGCAACTGACATGCGCGATCTCTGGCGAGAGTCTGGCGTATCGCTTTACTGGAGATACGCCAGAACAGTGGTTAGCGAGTTTTCGTCAGCATCGCTGGGACCTGGA‑A‑G‑AAG < 2:124296/223‑1 GCCATCCAGTTTCCGGACAGGGAAGAGTGGGACGAGAATAAAAAATGTGTATGTTTTCACGCTCTCGTGAATGGTATGCAACTGACATGCGCGATCTCTGGCGAGAGTCTGGCGTATCGCTTTACTGGAGATACGCCCGACCGGTGGTTAGCGATGTTTCGCAAGCTTCCCTGGGACCTGGATACGAAAGCGGAAAACTTAATTCAGGGAAAAAGTGAAGAAGAACAAGGCTGGGatgg > 1:850647/1‑235 ATAAAAAATGTTTAGGTTTTCCCGGCCTCGTGAATGGTATGCAACTGACATGCGCGATCTCTGGCGAGAGTCTGGCGTATCGCTTTACTGGAGATACGCCAGAACAGTGGTTAGCGAGTTTTCGTCAGCATCGCTGGGACCTGGA‑A‑G‑AAGCGGAAAACTTAATTCAGGAACAAAGTGAAGATGATCAAGGCTGGGTCTGGT < 1:380712/201‑1 TGTATGTTTTCCCGCTCTCGTGAATGGTATGCAACTGACATGCGCGATCTCTGGCGAGAGTCTGGCGTATCGCTTTACTGGAGATACGCCAGAACAGTGGTTAGCGAGTTTTCGTCAGCATCGCTGGGACCTGGA‑A‑G‑AAGCGGAAAACTTAATTCAGGAACAAAGTGAAGATGATCAAGGCTGGGTCTGGTTACCCTGATC > 2:380712/1‑201 A‑G‑AAGCGGAAAACTTAATTCAGGAACAAAGTGAAGATTATCAAGGCTGGGTCTGGTTACCCTGATCCAGATATTCGTCCTTCCATTTCACGTAATTATTCGCGGAATAGCGTAACCCAGCCTTCTCTTCATCACTTAACGGGCGGATCTGTTTGACGGGGCTACCGAGATACAGATATCCGCTCTCCAGCCGTTTATTTTGTGGGACCAGACTACCCGCACCAATCATCACATCATCTT < 1:467174/239‑1 atAAGCGGAAAACTTAATTCAAGAAAAAAGGTAATATTATCAAGGCCGGGTTTGGTTACCCTTATCCAGTGATTCGTCCTTCCATTTCACGTAATTATTCGCGGAATAGCGTAACCCAGCCTTCTCTTCATCACTTAACGGGCGGATCTGTTTGACGGGGCTACCGAGATACAGATATCCGCTCTCCAGCCGTTTATTTTGTGGGACCAGACTACCCGCACCAATCATCACATCATC < 1:565594/235‑1 AGCGGAAAACTTAATTCAGGAACAAAGTGAAGATGATCAAGGCTGGGTCTGGTTACCCTGATCCAGATATTCGTCCTTCCATTTCACGTAATTATTCGCGGAATAGCGTAACCCAGCCTTCTCTTCATCACTTAACGGGCGGATCTGTTTGACGGGGCTACCGAGATACAGATATCCGCTCTCCAGCCGTTTATTTTGTGGGACCAGACTACCCGCACCAATCATCACATCATCTTC < 2:758822/237‑1 GACGTAGAACCAGTTATAAAGCAATTGCAGGAGGAATTGTCCGCGTGAATCAGGCCATCCAGTTTCCGGACAGGGAAGAGTGGGACGAGAATAAAAAATGTGTATGTTTTCCCGCTCTCGTGAATGGTATGCAACTGACATGCGCGATCTCTGGCGAGAGTCTGGCGTATCGCTTTACTGGAGATACGCCAGAACAGTGGTTAGCGAGTTTTCGTCAGCATCGCTGGGACCTGGA‑A‑G‑AAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3430065‑3429826‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ga‑a‑g‑aagCGGAAAACTTAATTCAGGAACAAAGTGAAGATGATCAAGGCTGGGTCTGGTTACCCTGATCCAGATATTCGTCCTTCCATTTCACGTAATTATTCGCGGAATAGCGTAACCCAGCCTTCTCTTCATCACTTAACGGGCGGATCTGTTTGACGGGGCTACCGAGATACAGATATCCGCTCTCCAGCCGTTTATTTTGTGGGACCAGACTACCCGCACCAATCATCACATCATCTTC < NC_000913/3429822‑3429588 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |