New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1710418	40 (0.510)	3 (0.040)	3/408	NT	7.0%	coding (215/621 nt)	rsxG	SoxR iron‑sulfur cluster reduction factor component, putative membrane protein of electron transport complex
	?	NC_000913	2101750 =	NA (NA)					intergenic (‑6/+145)	wbbL/insH1	pseudogene, lipopolysaccharide biosynthesis protein/IS5 transposase and trans‑activator

CCATCGCAAAGGGTAAACCATGCTGAAAACTATCCGAAAACACGGCATTACGTTGGCGCTATTTGCAGCGGGTTCAACAGGGTTAACTGCGGCCATCAACCAGATGACCAAAACGACGATTGCTGAACAGGCCAGTCTGCAACAAAAGGCGTTATTTGATCAGGTGCTGCCAGCCGAACGCTATAACAATGCGCTGGCACAGAGTTGCTATCTGGTAACTGCGCCAGAGTTAGGTAAAGGTGAGCATCGGGTTTACATCGCCAAACAGGATGACAAACCGGTAGCCGCCGTTCTGGAAGCAACCGCGCCAGATGGCTATTCCGGTGCGATTCAGCTGCTGGTGGGAGCCGATTTTAACGGCACGGTACTTGGCACGCGCGTGACAGAGCACCACGAAACGCCAGGGCTTGGCGATAAAATCGAACTGCGCCTTTCTGACTGGATCACCCATTTTGCGGGTAAAAAAATCAGT  >  NC_000913/1710185‑1710656                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                               ccATCGCAAAGGGTAAACCATGCTGAAAACTATCCGAAAACACGGCATTACGTTGGCGCTATTTGCAGCGGGTTCAACAGGGTTAACTGCGGCCATCAACCAGATGACCAAAACGACGATTGCTGAACAGGCCAGTCTGCAACAAAAGGCGTTATTTGATCAGGTGCTGCCAGCCGAACGCTATAACAATGCGCTGGCACAGAGTTGCTATCTGGTAACTCCGCCAGAGTTAGGgcaag                                                                                                                                                                                                                                           >  2:721599‑M1/1‑234 (MQ=255)         acgggTAAACCATGGTGAAAACTATCCGAAAACCGCGCCTTACGGTGGCGTTTTTTGCGGCGGGTTCAACAGGGTTAACTGCGGCCATCAACCAGATGACCAAAACGACGATTGCTGAACAGGCCAGTCTGCAACAAAAGGCGTTATTTGATCAGGTGCTGCCAGCCGAACGCTATAACAATGCGCTGGCACAGAGTTGCTATCTGGTAACTGCGCCAGAGTTAGGTAAAGGTGAGCAt                                                                                                                                                                                                                                   <  1:918843/237‑1 (MQ=255)            ggTAAACCATGCTGAAAACTATCCGAAAACCCGGCATTACGTTGGCGCTATTTGCAGCGGGTTCAACAGGGTTAACTGCGGCCATCAACCAGATGACCAAAACGACGATTGCTGAACAGGCCAGTCTGCAACAAAAGGCGTTATTTGATCAGGTGCTGCCAGCCGAACGCTATAACAATGCGCTGGCACAGAGTTGCTATCTGGTAACTGCGCCAGAGTTAGGTAAAGGTg                                                                                                                                                                                                                                        <  2:817645/231‑1 (MQ=255)                      gCTGAAAACTATCCGAAAACACGGCATTACGTTGGCGCTATTTGCAGCGGGTTCAACAGGGTTAACTGCGGCCATCAACCAGATGACCAAAACGACGATTGCTGAACAGGCCAGTCTGCAACAAAAGGCGTTATTTGATCAGGTGCTGCCAGCCGAACGCTATAACAATGCGCTGGCACAGAGTTGCTATCTGGTAACTGCGCCAGAGTTAGGTAAAGGTGAGCATCGGGTTTACATc                                                                                                                                                                                                                       >  2:145707/1‑238 (MQ=255)                      gCTGAAAACTATCCGAAAACACGGCATTACGTTGGCGCTATTTGCAGCGGGTTCAACAGGGTTAACTGCGGCCATCAACCAGATGACCAAAACGACGATTGCTGAACAGGCCAGTCTGCAACAAAAGGCGTTATTTGATCAGGTGCTGCCAGCCGAACGCTATAACAATGCGCTGGCACAGAGTTGCTATCTGGTAACTGCGCCAGAGTTAGGCAAAGGTGAGCATCGGGTTTACATc                                                                                                                                                                                                                       >  2:635132/1‑238 (MQ=255)                      gCTGAAAACTATCCGAAAACACGGCATTACGTTGGCGCTATTTGCAGCGGGTTCAACAGGGTTAACTGCGGCCATCAACCAGATGACCAAAACGACGATTGCTGAACAGGCCAGTCTGCAACAAAAGGCGTTATTTGATCAGGTGCTGCCAGCCGAACCCAATAACAATAGGCTGGCACAGGGTTGCTCTCTGGAAACTTC‑CCCGAGGTAGGgaaaagggaacaacgggggttgtgc                                                                                                                                                                                                                       >  1:817645‑M1/1‑212 (MQ=255)                      gCTGAAAACTATCCGAAAACACGGCATTACGTTGGCGCTATTTGCAGCGGGTTCAACAGGGTTAACTGCGGCCATCAACCAGATGACCAAAACGACGATTGCTGAACAGGCCAGTCTGCAACAAAAGGCGTTATTTGATCAGGTGCTGCCACCCGAACGCTATAACAATGCGCTGGCACAGGGTTGCTATCTGGCAACTGCGCACGAGTTAGGAAAAGGTGAGCATCGGGTTTACATc                                                                                                                                                                                                                       >  2:893275/1‑238 (MQ=255)                      gCTGAAAACTATCCGAAAACACGGCATTACGTTGGCGCTATTTGCAGCGGGATCAACAGGGTTTACTGCGGCCCTTAACCTGATGACCAAATCGACGATTGCTGAACAGGCCAGGCTGCAGCAAAAGGCGGTAATTGCTCAGGCGCGTCCAGCCGAACGCTGTAACACTTCCCTGGTGCAGAGTTTCCCTCTGGGAACATGGCCACAGTTTGGTAAAGGAGAGCAACGGGTTTaacagc                                                                                                                                                                                                                      >  1:817828/1‑234 (MQ=255)                           aaacgtgcctaaaaCCCGGCATTCGGGTGGCGCGTTTTGCAGCGGTGTCAACAGGGTTAACTGGGGCCATCAACCAGATGACCAAAACGACGATTGCTGAACAGGCCAGTCTGCAACAAAAGGCGTTATTTGATCAGGTGCTGCCAGCCGAACGCTATAACAATGCGCTGGCACAGAGTTGCTATCTGGTAACTGCGCCAGAGTTAGGTAAAGGTGAGCATCGGGTTTACATCGCCaaa                                                                                                                                                                                                                 <  1:609379/229‑1 (MQ=255)                              cTATCCGAAAACCCCGCCTTACTTTGGCGCGTTTTCAATCGGGTCCAACAGGGTTAACTGCGGCCATCAACCAGATGACCAAAACGACGATTGCTGAACAGGCCAGTCTGCAACAAAAGGCGTTATTTGATCAGGTGCTGCCAGCCGAACGCTATAACAATGCGCTGGCACAGAGTTGCTATCTGGTAACTGCGCCAGAGTTAGGTAAAGGTGAGCATCGGGTTTACATCGCCAAACAg                                                                                                                                                                                                              <  1:594617/239‑1 (MQ=255)                                                        gcgcTATTTGCAGCGGGTTCAACAGGGTTAACTGCGGCCATCAACCAGATGACCAAAACGACGATTGCTGAACAGGCCAGTCTGCAACAAAAGGCGTTATTTGATCAGTTTCTGCCAGCCGAACGCTATAACAATGCGCTGGCACCGAGTTACTATCTGGTAACTGCGCCCAGGTTAGGTAAAGGGCAGCATCGGGTTTACa                                                                                                                                                                                                                         >  1:614570/1‑202 (MQ=255)                                                        gcgcTATTTGCAGCGGGTTCAACAGGGTTAACTGCGGCCATCAACCAGATGACCAAAACGACGATTGCTGAACAGGCCAGTCTGCAACAAAAGGCGTTATTTGATCAGGTGCTGCCAGCCGAACGCTATAACAATGCGCTGGCACAGAGTTGCTATCTGGTAACTGCGCCAGAGTTAGGTAAAGGTGAGCATCGGGTTTACATCGCCAAACAGGCTGACAAACCGGTAACCGCCGt                                                                                                                                                                                       >  2:1019361/1‑236 (MQ=255)                                                        gcgcTATTTGCAGCGGGTTCAACAGGGTTAACTGCGGCCATCAACCAGATGACCAAAACGACGATTGCTGAACAGGCCAGTCTGCAACAAAAGGCGTTATTTGATCAGGTGCTGCCAGCCGAACGCTATAACAATGCGCTGGCACAGAGTTGCTATCTGGTAACTGCGCCAGAGTTAGGTAAAGGTGAGCATCGGGTTTACATCGCCAAACAGGATGACAAACCGGTAGCCGCCGt                                                                                                                                                                                       >  2:707006/1‑236 (MQ=255)                                                        gcgcTATTTGCAGCGGGTTCAACAGGGTTAACTGCGGCCATCAACCAGATGACCAAAACGACGATTGCTGAACAGGCCAGTCTGCAACAAAAGGCGTTATTTGATCAGGTGCTGCCAGCCGAACGCTATAACAATGCGCTGGCACACAGTTGCTATCTGGAAACTGCGCCAGGGTTAGGTAAAGGTGAGCATCGGGTTTACCTCGCCAAACAGGTTGGAAAAACGGTAGCCGACGttgt                                                                                                                                                                                    >  1:305401/1‑237 (MQ=255)                                                                        gTTCAACAGGGTTAACTGCGGCCATCAACCAGATGACCAACACGACGATTGCTGAACAGGCCAGTCTGCAACAAAAGGCGTTATTTGATCAGGTGCTGCCAGCCGAACGCTATAACAATGCGCTGGCACAGAGTTGCTATCTGGTAACTGCGCCAGAGTTAGGTAAAGGTGAGCCTCGGGGTTAAATCGCCAAACAGGAGCGCAAACCGGGAGCCCCCGGTCTGGAAGCAAcgcggcag                                                                                                                                                                    >  1:794180/1‑232 (MQ=255)                                                                          tcactggtgttcacgcccgCCAACAACCGGATGACAAAAACGTGGATTGCTAAACGGGCAAGTCCGCAAAAAAAGGCTGTATTTGATCGGGTGCTCCCAGCCGAACGCTATAACAATGCGTTGGCACAGAGTTGTGATCTGGTACCTGCGCCAGAGTTAGGAAAAGGTGCGCATCGGGTTTACACCGCCAAACAGGATGACAACCCGGTAGCCGCCGTTCTGGAAGCAACCGCGCCAg                                                                                                                                                                   <  1:145707/220‑1 (MQ=255)                                                                                      aCTGCGGCCATCAACCAGATGACCAAAACGACGATTGCTGAACAGGCCAGTCTGCAACAAAAGGCGTTATTTGATCAGGTGCTGCCAGCCGAACGCTATAACAATGCGCTGGCACAGAGTTGCTATCTGGTAACTGCGCCAGAGTTAGGTAAAGGTGAGCATCGGGTTTACATCGCCAAACAGGATGACAAACCGGAAGCCGCCGTTCTGGAAGCAACCGCGCCAGATGGCTATTCCgg                                                                                                                                                      >  2:616235/1‑239 (MQ=255)                                                                                           ggCCATCAACCAGATGACCAAAACGACGATTGCTGAACAGGCCAGTCTGCAACAAAAGGCGTTATTTGATCAGGTGCTGCCAGCCGAACGCTATAACAATGCGCTGGCCCAGAGTTGCTATCTGGTAACTGCGCCAGAGTTAGGTAAAGGTGAGCATCGGGTTTACAACGCCAAACAGGATAACAAACCGGTAGCCTCCGTTCTGGAAGCAACGGCGCCAGCTGGCTATTCCgggtcga                                                                                                                                                 >  2:195510/1‑234 (MQ=255)                                                                                           ggCCATCAACCAGATGACCAAAACGACGATTGCTGAACAGGCCAGTCTGCAACAAAAGGCGTTATTTGATCAGGTGCTGCCAGCCGAACGCTATAACAATGCGCTGGCACATAGTTGCTATCTGGTAACTGCGCCAGAGTTAGGgaaggtgcgaataagcggggaaattcttctcggctgcatcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttga                                                                                                                                                  >  2:19346‑M1/1‑144 (MQ=255)                                                                                           ggCCATCAACCAGATGACCAAAACGACGATTGCTGAACAGGCCAGTCTGCAACAAAAGGCGTTATTTGATCAGGTGCTGCCAGCCGAACGCTATAACAATGCGCTGGCACAGAGTTGCTATCTGGTAACTGCGCCAGAGTTAGGTAAAGGTGAGCATCGGGTTTACATCGCCAAACAGGATGACAAACCGGTAGCCGCCGTTCTGGAAGCAACCGCGCCAGATGGCTATTCCGGTGCGa                                                                                                                                                 >  2:918517/1‑239 (MQ=255)                                                                                                tCAACCAGATGACCAAAACGACGATTGCTGAACAGGCCAGTCTGCAACAAAAGGCGTTATTTGATCAGGTGCTGCCAGCCGAACGCTATAACAATGCGCTGGCACAGAGTTGCTATCTGGTAACTGCGCCAGCGTTAGGTAAAGGTGAGCATCGGGCTTACATCGCCAAACAGGATGACAAACCGGTAGCCGCCGTTCTGGAAGCAACCGCGCCAGCTGGCTATTCCGGGGCGATCCa                                                                                                                                             >  2:106813/1‑238 (MQ=255)                                                                                                         tGACCAAAACGACGATTGCTGAACAGGCCAGTCTGCAACAAAAGGCGTTATTTGATCAGGTGCTGCCAGCCGAACGCTATAACAATGCGCTGGCACAGAGTTGCTATCTGGTAACTGCGCCAGAGTTAGGTAAAGGTGAGCATCGGGTTTACATCGCCAAACAGGATGACAAACCGGTAGCCGCCGTTCTGGAAGCAACCGCGCCAGATGGCTATTCCGGTGCGATTCAGCTGCtggtg                                                                                                                                   >  2:903229/1‑239 (MQ=255)                                                                                                                                   gCCAGTCTGCAACAAAAGGCGTTATTTGATCAGGTGCTGCCAGCCGAACGCTATAACAATGCGCTGGCACAGAGTTGCTATCTGGTAACTGCGCCAGAGTTAGGTAAAGGTGAGCATCGGGTTTACATCGCCAAACAGGATGACAAACCGGTAGCCGCCGTTCTGGAAGCAACCGCGCCAGATGGCTATTCCGGTGCGATTCAGCTGCTGTTGGGAGCCGCTTTTAACGGCACGGTCCt                                                                                                         >  2:222583/1‑239 (MQ=255)                                                                                                                                                  aaGGCGTTATTTGATCAGGTGCTGCCAGCCGAACGCTATAACAATGCGCTGGCACAGAGTTGCTATCTGGTAACTGCGCCAGAGTTAGGTAAAGGTGAGCATCGGGTTTACATCGCCAAACAGGATGACAAACCGGTAGCCGCCGTTCTGGAAGCAACCGCGCCAGATGGCTATTCCGGTGCGATTCAGCTGCTGGTGGGAGCCGATTTTAACGGCACGGTACTTGGCAcccgcgcgcc                                                                                          >  2:391551/1‑235 (MQ=255)                                                                                                                                                    ggCGTTATTTGATCAGGTGCTGCCAGCCGAACGCTATAACAATGCGCTGGCACAGAGTTGCTATCTGGTAGCTGCGCCAGAGTTAGGTAAAGGTGAGCATCGGGTTTACATCGCCAAACAGGATGACAAACCGGTAGCCGCCGTTCTGGAAGCAACCGCGCCAGATGGCTATTCCGGTGCGATTCAGCTGCTGGTGGGAGCCGATTTTAAAGGCACGGGACTTGGCACGCGCGTGACaa                                                                                        >  1:411056/1‑238 (MQ=255)                                                                                                                                                       tttttttgacaggggcccgcCAGCCGAACCTTAAAAAAATGCGCTGGAAAGGGTTTGCTTTCTGGTAACTGCCCCAGATTTAGGTAAAGGTGAGCATCGGTTTTACATCGCCAAACAGGATGACAAACCGGTAGCCGCCGTTCTGGAAGCAACCGCGCCAGATGGCTATTCCGGTGCGATTCAGCTGCTGGTGGGAGCCGATTTTAACGGCACGGTACTTGGCACGCGCGTGACagag                                                                                      <  2:839256/220‑1 (MQ=255)                                                                                                                                                          aTTTGATCAGGTGCTGCCAGCCGAACGCTATAACAATGCGCTGGCACAGAGTTGCTATCTGGTAACTGCGCCAGAGTTAGGTAAAGGTGAGCATCGGGTTTACATCGCCAAACAGGATGACAAACCGGTAGCCGCCGTTCTGGAAGCAACCGCGCCAGATGGCGATTCCGGTGCGCTTCAGCTGCTGGTGGGAGCCGATTTTAACGGCACGGTACTTGGCACCCGCGGGAAAAAGaacc                                                                                  >  1:839256/1‑239 (MQ=255)                                                                                                                                                               aTCAGGTGCTGCCAGCCGAACGCTATAACAATGCGCTGGCACAGAGTTGCTATCTGGTAACTGCGCCAGAGTTAGGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctccc                                                                              >  2:331965‑M1/1‑76 (MQ=255)                                                                                                                                                                                        taACAATGCGCTGGCACAGAGTTGCTATCTGGTAACTGCGCCAGAGTTAGGTAAAGGTGAGCATCGGGTTTACATCGCCAAACAGGATGACAAACCGGTAGCCGCCGTTCTGGAAGCAACCGCGCCAGATGGCTATTCCGGTGCGATTCAGCTGCTGGTGGGAGCCGATTTTAACGGCACGGTACTTGGCACGCGCGTGACAGAGCACCACGAAACGCCGGGGCTTGGCGATAAAATCg                                                    >  2:358339/1‑239 (MQ=255)                                                                                                                                                                                        taACAATGCGCTGGCACAGAGTTGCTATCTGGTAACTGCGCCAGAGTTAGGTAAAGGTGAGCATCGGGTTTACATCGCCAAACAGGATGACAAACCGGTAGCCGCCGTTCTGGAAGCAACCGCGCCAGATGGCTATTCCGGTGCGATTCAGCTGCTGGTGGGAGCCGATTTTAACGGCACGGTACTTGGCACGCGCGTGACAGAGCACCACGAAACGCCAGGGCTTGGCGATAAAATCg                                                    >  2:11764/1‑239 (MQ=255)                                                                                                                                                                                            aatgggtcggCAAAGAGTTGCTATCTGGTAACGGCGCCAGAGTTAGGTAAAGGTGAGCATCGGGTTTACATCGCCAAACAGGATGAAAAACCGGTAGCCGCCGTTCTGGAAGCAACCGCGCCAGATGGCTATTCCGGTGCGATTCAGCTGCTGGTGGGAGCCGATTTTAACGGCACGGTACTTGGCACGCGCGTGACAGAGCACCACGAAACGCCAGGGCTTGGCGATAAAATCGaa                                                  <  2:305401/229‑1 (MQ=255)                                                                                                                                                                                              tGCGCTGGCACAGAGTTGCTATCTGGTAACTGCGCCAGAGTTAGGTAAAGGTGAGCATCGGGTTTACATCGCCAAACAGGATGACAAACCGGTAGCCGCCGTTCTGGAAGCAACCGCGCCAGATGGCTATTCCGGTGCGATTCAGCTGCTGGTGGGAGCCGATTTTAACGGCACGGTACTTGGCACGCGCGTGACAGAGCACCACGAAACGCCAGGGCTTGGCGATAAAATCGAACTg                                               >  2:779263/1‑238 (MQ=255)                                                                                                                                                                                               gcgcTGGCACAGAGTTGCTATCTGGTAACTGCGCCAGAGTTAGGTAAAGGTGAGCATCGGGTTTACATCGCCAAACAGGATGACAAACCGGTAGCCGCCGTTCTGGAAGCAACCGCGCCAGATGGCTATTCCGGTGCGATTCAGCTGCTGGGGGTAGCCGATTTTAACGGCCCGGGACTTGGCACTCTCGTGACAGAGCGCCACGAAACGCCAGGGCTTGGCAATAAAATCAAACttg                                              >  2:830859/1‑236 (MQ=255)                                                                                                                                                                                                cgcTGGCACAGAGTTGCTATCTGGTAACTGCGCCAGAGTTAGGgaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgccgtaacatttggtccgcccgaaacagggt                                            >  1:440924‑M1/1‑43 (MQ=255)                                                                                                                                                                                                cgcTGGCACAGAGTTGCTATCTGGTAACTGCGCCAGAGTTAGGTAAAGGTGAGCATCGGGTTTACATCGCCAAACAGGATGACAAACCGGTAGCCGCCGTTCTGGAAGCAACCGCGCCAGATGGCTATTCCGGTGCGATTCAGCTGCTGGTGGGAGCCGATTTTAACGGCACGGTACTTGGCACGCGCGTGACAGATCACCACGAAACGCCAGGGCTTGGCGCTAAAATCGAACTgcg                                             >  2:993623/1‑238 (MQ=255)                                                                                                                                                                                                cgcTGGCACAGAGTTGCTATCTGGTAACTGCGCCAGAGTTAGGTAAAGGTGAGCATCGGGTTTACATCGCCAAACAGGATGACAAACCGGTAGCCGCCGTTCTGGAAGCAACCGCGCCAGATGGCTATTCCGGTGCGATTCAGCTGCTGGTGGGAGCCGATTTTAACGGCACGGTACTTGGCACGCGCGTGACAGAGCACCACGAAACGCCAGGGCTTGGCGCTAAAATCGAACTgcg                                             >  2:332783/1‑238 (MQ=255)                                                                                                                                                                                                cgcTGGCACAGAGTTGCTATCTGGTAACTGCGCCAGAGTTAGGTAAAGGTGAGCATCGGGTTTACATCGCCAAACAGGATGACAAACCGGTAGCCGCCGTTCTGGAAGCAACCGCGCCAGATGGCTATTCCGGTGCGATTCAGCTGCTGGTGGGAGCCGATTTTAACGGCACGGGACTTGGCACGCGCGTGGCAGAGCACCACGAAACGCAAGGGGTTGGGGATAAAACCGaaacggg                                             >  1:441768/1‑233 (MQ=255)                                                                                                                                                                                                cgcTGGCACAGAGTTGCTATCTGGTAACTGCGCCAGAGTTAGGTAAAGGTGAGCATCGGGTTTACATCGCCAAACAGGATGACAAACCGGTAGCCGCCGTTCTGGAAGCAACCGCGCCAGATGGCTATTCCGGTGCGATTCAGCTGCGGGTGGGAGCGGATTTTAACGGCACGGGACTTGGCCCGCGCGTGATAGAGCACCACGAAACGCCAGGGCTTGGCGGTaaaaaagaaacgcg                                             >  1:701652/1‑228 (MQ=255)                                                                                                                                                                                                  cTGGCACAGAGTTGCTATCTGGTAACTGCGCCAGAGTTAGGTAAAGGTGAGCATCGGGTTTACATCGCCa                                                                                                                                                                                                                   <  2:423910/70‑1 (MQ=255)                                                                                                                                                                                                  cTGGCACAGAGTTGCTATCTGGTAACTGCGCCAGAGTTAGGTAAAGGTGAGCATCGGGTTTACATCGCCa                                                                                                                                                                                                                   >  1:423910/1‑70 (MQ=255)                                                                                                                                                                                                  cTGGCACAGAGTTGCTATCTGGTAACTGCGCCAGAGTTAGGTAAAGGTGAGCATCGGGGTTACATCGCCAAACAGGATGCCAAACCGGTAGCCGCCGTTCTGGAAGCAACCGCGCCAGATGGCTATTCCGGTGCGATTCAGCTGCTGTGGGGCGCCGCTTTTAACGGCACGGTAATTGGCAGCGGCGTGCCAGACCACCACGAAACGCACGGGCTTGACGGTAAAATCGAACTTCACCt                                          >  1:728172/1‑239 (MQ=255)                                                                                                                                                                                                               gCTATCTGGTAACTGCGCCAGAGTTAGGTAAAGGTGAGCATCGGGTTTACATCGCCAAACAGGATGACAAACCGGTAGCCGCCGTTCTGGAAGCAACCGCGCCAGATGGCTATTCCGGGGCGATTCAGCTGCTGGTGGCCGCCGAATTTAACGGACGGGTACTTGGCACGCGCGTGACCAAGACCCCCGACACGCCAGGGCTTGGCGAAAAAATCGAACTGCGCCttctgcaacggaac                             >  1:21520/1‑227 (MQ=255)                                                                                                                                                                                                               gCTATCTGGTAACTGCGCCAGAGTTAGGTAAAGGCGAGCATCGGGTTTACATCGCCAAACAGGATGACAAACCGGTAGCCGCCGTTCTGGAAGCAACCGCGCCAGATGGCTATTCCGGTGCGATTCAGCTGCTGGTGGGAGCCGATTTTAACGGCACGGTACTTGGCACGCGCGTGCCAGAGCACCACGAAACGCCAGGGCTTGGCGATAAAATCGACCTGCGCCTTTCTGACTGGATc                             >  2:38788/1‑239 (MQ=255)                                                                                                                                                                                                                     tGGTAACTGCGCCAGAGTTAGGTAAAGGTGAGCATCGGGTTTACATCGCCAAACAGGATGACAAGCCGGTAGCCGCCGTTCTGGAAGCAACCGCGCCAGATGGCTATTCCGGTGCGATTCAGCTGCTGGTGGGAGCCGATTTTAACGGCACGGTACTTGGCACGCGCGTGACAGAGCACCACGAAACGCCAGGGCTTGGCGCTAAAATCGAACTGCGCCTTTCTGACTGGCACACCCAt                       >  2:136896/1‑239 (MQ=255)                                                                                                                                                                                                                     tGGTAACTGCGCCAGAGTTAGGTAAAGGTGAGCATCGGGTTTACATCGCCAAACAGGATGACAAACCGGTAGCCGCCGTTCTGGAAGCAACCGCGCCAGATGGCTATTCCGGTGCGATTCAGCTGCTGGTGGGAGCCGATTTTAACGGCACGGTACTTGGCACGCGCGTGACAGAGCACCACGAAACGCCAGGGCTTGGCGATAAAATCGAACTGCGCCTTTCTGACGGGATCAccact                       >  2:522941/1‑236 (MQ=255)                                                                                                                                                                                                                                      ttAGGTAAAGGTGAGCATCGGGTTTACATCGCCAAACAGGATGACAAACCGGTAGCCGCCGTTCTGGAAGCAACCGCGCCAGATGGCTATTCCGGTGCGATTCAGCTGCTGGTGGGAGCCGATTTTAACGGCACGGTACTTGGCACGCGCGTGACAGAGCACCCGGAAACGCCAGGGCTGGGCGGTAAAATCGAACTGCGCCTTCATGACTGGATCACCCATTTTGCGGGTaaaaacag      >  2:827649/1‑236 (MQ=255)                                                                                                                                                                                                                                      ttAGGAAAGGGTGGGCTGCGGGTTTAAAGCGACAAACAGGTGGAAAACCCGGTAGCCGCCGTTCTGGAAGCAACCGCGCCAGATGGCTATTCCGGTGCGATTCAGCTGCTGGTGGGAGCCGATTTTAACGGCACGGTACTTGGCACGCGCGTGACAGAGCACCACGAAACGCCAGGGCTTGGCGATAAAATCGAACTGCGCCTTTCTGACTGGATCACCCATTTTGCGGGTAAAAAAAt      <  2:441768/239‑1 (MQ=255)                                                                                                                                                                                                                                          ggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaatcaggttggccagcgtgaataacatcgccagttggttatcgtttttcag  >  2:821331‑M1/1‑1 (MQ=255)                                                                                                                                                                                                                                          ggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggccagcttgaataacatcgccagttggttatcgtttttca   >  2:698154‑M1/1‑1 (MQ=255)                                                                                                                                                                                                                                          ggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagt                                                                                          <  2:655861‑M1/151‑151 (MQ=255)                                                                                                                                                                                                                                          ggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagt                                                                                          >  1:655861‑M1/1‑1 (MQ=255)                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                               CCATCGCAAAGGGTAAACCATGCTGAAAACTATCCGAAAACACGGCATTACGTTGGCGCTATTTGCAGCGGGTTCAACAGGGTTAACTGCGGCCATCAACCAGATGACCAAAACGACGATTGCTGAACAGGCCAGTCTGCAACAAAAGGCGTTATTTGATCAGGTGCTGCCAGCCGAACGCTATAACAATGCGCTGGCACAGAGTTGCTATCTGGTAACTGCGCCAGAGTTAGGTAAAGGTGAGCATCGGGTTTACATCGCCAAACAGGATGACAAACCGGTAGCCGCCGTTCTGGAAGCAACCGCGCCAGATGGCTATTCCGGTGCGATTCAGCTGCTGGTGGGAGCCGATTTTAACGGCACGGTACTTGGCACGCGCGTGACAGAGCACCACGAAACGCCAGGGCTTGGCGATAAAATCGAACTGCGCCTTTCTGACTGGATCACCCATTTTGCGGGTAAAAAAATCAGT  >  NC_000913/1710185‑1710656

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.