Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	2469259	2469572	314	17 [15]	[16] 17	gtrS	serotype‑specific glucosyl transferase, CPS‑53 (KpLE1) prophage

TATACATACGTCCTGTTTATTAGCATTTTTACTGAATATCTTGATGCTAGGGTGTTATCGTTATTTCTAAAAGTAATATATATTTATTCATTATATGCGATATTTACTTCATATATAAAAACAGAAAGGTATGTAACTTTATTTACATTCTTTATTTTAGCTTTTCTTATGTGTTCTTCATCAACACTGTCAATGTTTGCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCATATTATATTTTTTTTGATAGACACAAACTAATTATTAAATCTGTAATATGCGTGGTGTGCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAA  >  NC_000913/2469357‑2469811                                                                                                                                                                                                                         |                                                                                                                                                                                                                                               tataCATACGTCCTGTTTATTAGCATTTTTACTGAATATCTTGATGCTAGGGTGTTATAGTTATTTCTAAAAGTAATATATATTTATTCATTATATGCGATATTTACTTCATATATAAAAACAGAAAGGTATGTAACTTTATTTACATTCTTTATTTTAGCTTTTCTTATGAGTTCTTCATCAACACTGTCAATGTTTGCATCTTTCTATCAAGAGTAAATAGTTATAATTttcctt                                                                                                                                                                                                                            >  2:919878/1‑237 (MQ=255)                             tttctaaaTATTTGGATGGTTGGGTGTTATGTTTTTTTCTAAAAAGTATATATAATTATTCCTTATATGCGATATTTTCTTCATATATAAAAACAGAAAGGTATGTAACTTTATTTACATTCTTTATTTTAGCTTTTCTTATGTGTTCTTCATCAACACTGTCAATGTTTGCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCaaa                                                                                                                                                                                              <  1:919878/233‑1 (MQ=255)                                                                                  atttattCATTATATGCGATATTTACTTCATATATAAAAACAGAAAGGTATGTAACTTTATTTACATTCTTTATTTTAGCTTTTCTTATGTGTTCTTCATCAACACTGTCAATGTTTGCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGc                                                                                                                                         >  2:352274/1‑239 (MQ=255)                                                                                                                                            tatttaCATTCTTTATTTTAGCTTTTCTTATGTGTTCTTCATCAACACTGTCAATGTTTGCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTa                                                                                                                                             <  2:799935/177‑1 (MQ=255)                                                                                                                                            tatttaCATTCTTTATTTTAGCTTTTCTTATGTGTTCTTCATCAACACTGTCAATGTTTGCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTa                                                                                                                                             >  1:799935/1‑177 (MQ=255)                                                                                                                                                           ttttAGCTTTTCTTATGGGTTTTTCATCAACACTGTCAATGTTGGCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAAc                                                                                                                    <  1:341588/187‑1 (MQ=255)                                                                                                                                                                     tCTTATGTGTTCTTCATCAACACTGTCAATGTTTGCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATa                                                                                                          >  2:341588/1‑187 (MQ=255)                                                                                                                                                                                ttttatcaACACTTTTAATTTTTTCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCATATTATATTTTTTTTGATAGACACAAACTAATTATTAAATCTGTAATATGCgtg                                           <  1:352274/235‑1 (MQ=255)                                                                                                                                                                                              tCAATGTTTGCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACaa                                                                                                                                                                                         >  2:156614/1‑83 (MQ=255)                                                                                                                                                                                              tCAATGTTTGCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCATCTTATATTTTTTTTGATAGaca                                                                          >  1:562080/1‑194 (MQ=255)                                                                                                                                                                                              tCAATGTTTGCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCATATTATATTTTTTTTGATAGaca                                                                          <  2:562080/194‑1 (MQ=255)                                                                                                                                                                                              tCAATGTTTGCATCATTCTATCAAGAGCAAATAGTTATAACTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACaa                                                                                                                                                                                         <  1:156614/83‑1 (MQ=255)                                                                                                                                                                                                        catcatTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGgt                                                                                                                                                                                                                 <  2:491223/49‑1 (MQ=255)                                                                                                                                                                                                        catcatTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGgt                                                                                                                                                                                                                 >  1:491223/1‑49 (MQ=255)                                                                                                                                                                                                                       agCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTATTTTTTTCGTTGCta                                                                                                                                                       >  1:852559/1‑92 (MQ=255)                                                                                                                                                                                                                       agCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTATTTTTTTCGTTGCta                                                                                                                                                       <  2:852559/92‑1 (MQ=255)                                                                                                                                                                                                                         cAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCATATTATATTTTTTTTGATAGACACAAACTAATTATTAAATCTGTAATATGCGTGGTGTGCTTGCTTGCGTCAATATTTGCAATATCTTATTCaaa  >  2:979453/1‑239 (MQ=255)                                                                                                                                                                                                                         |                                                                                                                                                                                                                                               TATACATACGTCCTGTTTATTAGCATTTTTACTGAATATCTTGATGCTAGGGTGTTATCGTTATTTCTAAAAGTAATATATATTTATTCATTATATGCGATATTTACTTCATATATAAAAACAGAAAGGTATGTAACTTTATTTACATTCTTTATTTTAGCTTTTCTTATGTGTTCTTCATCAACACTGTCAATGTTTGCATCATTCTATCAAGAGCAAATAGTTATAATTTTCCTTCCATTTTTGGTGTATTCATTAACATGCAAAAACAATAAATCTATGCTTTTGCTATTTTTTTCGTTGCTAATAATATCTACTGCTAAAAATCAATTTATATTAACCCCACTAATAGTGTATTCATATTATATTTTTTTTGATAGACACAAACTAATTATTAAATCTGTAATATGCGTGGTGTGCTTGCTTGCGTCAATATTTGCAATATCTTATTCAAA  >  NC_000913/2469357‑2469811

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑