| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 120,299 | A→C | 19.0% | V418G (GTG→GGG) | aroP ← | aromatic amino acid transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 120,299 | 0 | A | C | 19.0% | 155.7 / 2.6 | 69 | V418G (GTG→GGG) | aroP | aromatic amino acid transporter |
| Reads supporting (aligned to +/- strand): ref base A (45/8); new base C (2/14); total (47/22) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.85e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CCTCGTTCGTGGTCGTGGTGGTGATTGCACTACTGACGATTTACGGGGCGTTGGTGTAAAGATTATTGCCCTCACCCTG‑TACGGGTGAGGGCGTAGAGAGATTAATGCGCTTTTACG‑GCTTTGGCGGTTTTCTCTTTAAACAGATAGCCGATACCTAACACGATCAGCCATACCGGGATCAGGTATACCGAAATCGCCATTCCTGGGGTCATCAG‑CATAATCACCAGTACCGCCGCCATAAACAGCAGGCAGATCCAGTTACCCAGCGGATAAAGCAGAGCAGG‑GAAGCGAGTTACCACGCCTTGTTCCTGCTTGGCGCGACGGAATTTCATATGCGCCAGGCTAATCATCGCCCAGTTGATTACCAGTGCAGATACCACCAGCGCCATTAACAGTCCGAAAGCGGACTCTGGGGCAAGGTAGTTAATCAGTACGCACAACGCCGTTACCAGTGCAGACAC > NC_000913/120077‑120537 | ccTCGTTCGTGGTCGTGGTGGTGATTGCACTACTGACGATTTACGGGGCGTTGGTGTAAAGATTATTGCCCTCACCCTG‑TACGGGTGAGGGCGTAGAGAGATTAATGCGCTTTTACG‑GCTTTGGCGGTTTTCTCTTTAAACAGATAACCGAGACCTAACACGATCAGCCATACCGGGATCAGGGATACCGAAATCGCCCTTCCTGGGGTCATCAG‑CATAATACACAGAACCGCCGCCaa > 1:757541/1‑238 (MQ=255) gATTGCACTACTGACGATTTACGGGGCGTTGGTGTAAAGATTATTGCCCTCACCCTG‑TACGGGTGAGGGCGTAGAGAGATTAATGCGCTTTTACG‑GCTTTGGCGGTTTTCTCTTTAAACAGATAACCGACAACTAACACGATCAGCCATACCGTGATCAGGTATACCGAAATAGCCATTACCGGGGGCATCAG‑CATAATACACAGTACCCCCCCCCAAAAcaaccagcgaagccagtta > 1:325121/1‑222 (MQ=255) tGCACTACTGACGATTTACGGGGCGTTGGTGTAAAGATTATTGCCCTCACCCTG‑TACGGGTGAGGGCGTAGAGAGATTAATGCGCTTTTACG‑GCTTTGGCGGTTTTCTCTTTAAACAGATAGCCGATACCTAACACGATCAGCCATACCGGGATCCGGTATACCGAAATCGCCATTCCTTGGGTCCTCAG‑CATAATCACCAGTTCCGCCGCCATAAATAGCAAGCAGATCCAGGTAcca > 2:303724/1‑238 (MQ=255) gctctactGACGATTTGCGGGGCGTTGGTGTAAAGATTATTGCCCTCCCCCTG‑TACGGGTGAGGGCGTAGAGAGATTAATGCTCTTTTACG‑GCTTTGGCGGTTTTCTCTTTAAACAGATAGCCGATACCTAACACGATCAGCCATCCCGGGATCAGGTATACCGAAATCGCCATCCCTGGGGTAATCAG‑CATAATCCCCAGTACCGCCGCCATAAACAGCAGGCAGATCCAGTTACCCa < 2:251402/236‑1 (MQ=255) gCACTAGTGGCGTTTGACGGGGCGTGGGTGTAAAGATTATTGCCCTCACCGTG‑TACGGGTGAGGGCGTAGAGATATTAAGGCGCTTTTCCG‑GTTTTGGCGGTTTTCTTTTTAAACAGATAGCCGATCCCTAACACGATCAGCCATACCGGGATCAGGTATACCGAAATCGCCATTCCTGGGGTCATCAG‑CATAAGCACCAGTACCGCCGCCATAAACAGCAGGCAGATCCAGTTACCCa < 2:645278/239‑1 (MQ=255) ccACTACTGAGGTTTTGCGGGGCTTTGGTGTAAAGTTTATTGCCCTCACCTTG‑TAGGGGTGAGGGCGTAGAGAGATTAATGCGTTTTTACG‑GCTTGGGCGGTTTTCTCTTTAAACAGATAGCCGATCCCTAACACGATCAGCCATCCCGGGATCAGGTATACCGAAATCGCCATTCCTGGGGTCATCAG‑CATAATCACCAGTACCGCCGCCATAAACAGCAGGCAGATCCAGTTACCCa < 2:757541/238‑1 (MQ=255) actactGACGATTTACGGGGCGTTGGTGTAAAGATTATTGCCCTCACCCTG‑TACGGGTGAGGGCGTAGAGAGATTAATGCGCTTTTACG‑GCTTTGGCGGTTTTCTCTTTAAACAGATAGTCGATACCTAACACGATCAGCCATACCGGGATCAGGGATACCGAAATCGCCATTCCTGGGGTCATCAG‑CATAATCACCAGTACCGCCGCCATAAACAGCAGGAAGATCCAGTTACCCAGc > 2:30986/1‑239 (MQ=255) ttaaaagaaacaggATTATTGCCCT‑TCCCTGTTACGGGTGAGGGCGTAGAGAAATTAAGGCGTTTTTACG‑GTTTGGGCGGTTTTCCTTTTAAACAGATAGCCGATACCTAACACGATCAGCCATACCGGGATCAGGTATCCCGAAATCGCCATTCCTGGGGTCATCAG‑CATAATCCCCAGTACCGCCGCCATAAACAGCAGGCAGATCCAGTTACCCAGCGGATAAAGCAGAGCAGG‑Ga < 2:651495/226‑1 (MQ=255) gTTGGTGTAAAGATTATTGCCCTCACCCTG‑TACGGGTGAGGGCGTAGAGAGATTAATGCGCTTTTACG‑GCTTTGGCGGTTTTCTCTTTAAACAGATAGCCGATACCTAACACGATCAGCCATACCGGGATCAGGTATACCGAAATCGCCATTCCTGGGGTCATCAG‑CATAATCACCAGTACCGCCGCCCTAAACAGCAGGCAGATCCAGTTACCCACCGGATAAAGCAGAGCAGG‑Gaa > 2:206606/1‑238 (MQ=255) tGCCCTCACCCTG‑TACGGGTGAGGGCGTAGAGAGATTAATGCGCTTTTACG‑GCTTTGGCGGTTTTCTCTTTAAACAGATAGCCGATACCTAACACGATCAGCCATACCGGGATCAGGTATACCGAAATCGCCATTCCTGGGGTCATCAG‑CATAATCACCAGTAccg < 2:27244/166‑1 (MQ=255) tCACCCTG‑TACGGGTGAGGGCGTAGAGAGATTAATGCGCTTTTACG‑GCTTTGGCGGTTTTCTCTTTAAACAGATAGCCGATACCTAACACGATCAGCCATACCGGGATCAGGTATACCGAAATCGCCATTCCTGGGGTCATCAG‑CCTAATCACCCGAACCGCCGCCCTAAACAACCGGCAGATCCAGTTAACCAGCCGATAAAACAGAGCAGG‑GAAAGGAGGTACCCCggcccttaaac > 1:651495/1‑229 (MQ=255) aCCCTG‑TACGGGTGAGGGCGTAGAGAGATTAATGCGCTTTTACG‑GCTTTGGCGGTTTTCTCTTTAAACAGATAGCCGATACCTAACACGATCAGCCATACCGGGATCAGGTATACCGAAATCGCCATTCCTGGGGTCATCAG‑CATAATCACCAGTACCGCCGCCATAAACAGCAGGCAGATCCAATTACCCAGCGGATAAAGCAAGGAAGG‑GAAGGGAGTTACACCGCCTTGGTCCt > 2:757456/1‑237 (MQ=255) g‑TACGGGTGAGGGCGTAGAGAGATTAATGCGCTTTTACG‑GCTTTGGCGGTTTTCTCTTTAAACAGATAGCCGATACCTAACACGATCAGCCATACCGGGATCAGGTATAACGAAATCGCCATTCCCGGGGTCCTCAA‑CATAATAACCAGTAACGCCGCCCTAAAAAGCAGGCAGAACACGTTTCCCCACGGGTAAAACACAACAGG‑GAAACGAGTTACACCGCCttttccacgacttgg > 1:492984/1‑226 (MQ=255) g‑TACGGGTGAGGGCGTAGAGAGATTAATGCGCTTTTACG‑GCTTTGGCGGTTTTCTCTTTAAAAAGGTAGGCGATACCTAACACGATCAGCCATACCGGGATCAGGGATACCGAAATCGCCATTCCTGGGGTCATCAG‑CATAATCACCAGTACCGCCGCCCTAAACAGCAGCCAGATCCAGTTACCCAGCGGCTAAAGCAGAAACAG‑GAAGAGAGTTACCACGCCATGTTCCCGCCTGgc > 1:100436/1‑239 (MQ=255) tACGGGTGAGGGCGTAGAGAGATTAATGCGCTTTTACG‑GCTTTGGCGGTTTTCTCTTTAAACAGATAGCCGATACCTAACACGATCAGCCATACCGGGATCAGGTATACCGAAATCGCCATTCCTGGGGTCATCAG‑CATAATCACCAGTACCGCCGCCATAAACAGCAGGCCGATCCAGGTACCCCGCGGATAAAGCAAAGCAGG‑GAAGCGAGTTACCACGCCCTggttccgactggg > 2:242908/1‑226 (MQ=255) tACGGGTGAGGGCGTAGAGAGATTAATGCGCTTTTACG‑GCTTTGGCGGTTTTCTCTTTAAACAGATAACCGATACCTAAAACGATCAGCCATACCGGGATCAGGGATACCGAAAACGCCATTCCTGGGGTCATACG‑CCTAATCACCAGTACCCCCCCCCCAAACAGCAGGCAGAGCCAGTTACCCAGCGGAAAAAGCAAGGCGGG‑GAAACGAGGTACCACGCCTTTTTCCCGCTTgggg > 1:932764/1‑237 (MQ=255) gtggggggttAGAGATATTAATGCTTTTTTCCG‑GCTTTGGGGTTTTTCCTTTAAAACAGATGGCCGATACTTAACACGATCAGCCATACCGGGATCAGTTATCCCGAAATCGCCATCCCGGGGGTCATCAG‑CATAATCACCAGTACCGCCGCCATAAACAGCAGGCAGATCCAGTTACCCAGCGGATAAAGCAGAGCAGG‑GAAGCGAGTTACCACg < 2:575705/207‑1 (MQ=255) ggCGTAGAGAGATTAATGCGCTTTTACG‑GCTTTGGCGGTTTTTTCTTTAAACAAATAGCCGATACCTAACACGATCAGCCATAACGGGATCAGGTATACCGAAATCGCCATTCCTGGGGGCATCAG‑CCTAATCACCAGTACCCCCGCCATAAACAGCAGGCCGATCCAGTTACCCCCCGGATACACCCAAGCAGG‑GAAACGCAGTACCAACCCTTTTTCCCGCTTGGggcgcagagaat > 1:286062/1‑231 (MQ=255) ggCGTAGAGAGATTAATGCGCTTTTACG‑GCTTTGGCGGTTTTCTCTTTAAACAGATAGCCGATACCTAACACGATCAGCCATACCGGGATCAGGTATACCGAAATCGCCATTCCTGGGGTCATCAG‑CATAATCACCAGTACCGCCGCCATAAACAGCAGGCAGATCCAGTTACCCAGCGGATAAag > 2:201220/1‑186 (MQ=255) ggggtattaTGCCCTTTTTCGTGTTTGGGCGTTTTCCTTTTAAAACAGATCGCGGACCCCAAACACGACCACACATCCGTGGAACAGGTATCCCGAATCCGCCATTCGTGGGGTCATCAG‑CATAATCCCCAGTCCCGCCGCCATAAACAGCAGGCAGATCCAGTTACCCAGCGGATAAAGCAGAGCAGG‑GAAGCGAGTTACCACGCCTTGTTCCTGCTTGGCGCGACGGAATTTCata < 1:826819/230‑1 (MQ=255) aaaTTAATGGTTTTTTCCG‑GTTTTGGCGGTTTTCTCTTTAAACAGATAGCCGATCCCGACCACGACCAGCCAACCGGGGAACAGGTAGCCCAAAATCGCCTTTCCGGGGGTCATCAG‑CATAATCACCAGTACCGCCGCCATAAACAGCAGGCAGATCCAGTTACCCAGCGGATAAAGCAGAGCAGG‑GAAGCGAGTTACCACGCCTTGTTCCTGCTTGGCGCGACGGAATTTCATATg < 2:492984/235‑1 (MQ=255) aTTAATGCGCTTTTACG‑GCTTTGGCGGTTTTCTCTTTAAACAGATAGCCGATACCTAACACGATCAGCCATACCGGGATCAGGTATACCGAAATCGCCATTCCTGGGGGCATCAG‑CATAATCAACAGTACCGCCGCCATAAACAGAAAGCAGATCCATGTACCCAGCGGGAAAAGCAGAGCCGG‑GGAACGAGATACCACGCCTTGTTCCTGCTTGGCGCGCCGGAATTTCATATgaccc > 1:555294/1‑235 (MQ=255) tGCGCTTTTACG‑GCTTTGGCGGTTTTCTCTTTAAACAGATAGCCGATACCTAACACGATCAGCCATACCGGGATCAGGTATACCGAAATCGCCATTCCTGGGGTCATCAG‑CATAATCACCAGTACCGCCGCCATAAACAGCAGGCAGATCCAGTTACCCAGCGGATAAAGCAGAGCAGG‑GAAGCGAGTTACCACGCCTTGTTCCTGCTTGGCGCGACGGAATTTCCTATGCGCCCGGCt > 2:127285/1‑239 (MQ=255) gcTTTTACG‑GCTTTGGCGGTTTTCTCTTTAAACAGATAGCCGATACCTAACACGATCAGCCATACCGGGATCAGGTATACCGAAATCGCCATTCCTGGGGTCATCAG‑CATAATCACCAGTACCGCCGCCATAAACAGCAGGCAGATCCGGTTACCCAGCGGATAAAGCAGAGCAGG‑GAAGAGAGTTACCACGACTTGTTCCTGCTTGGCGCGACGGAATTTCATATGCGCCAGGCTAat > 2:124866/1‑239 (MQ=255) g‑gCTTTGGCGTTTTTCTTTTAAAACAGATAGCCGATACTTAACCCGATCAGCCATACCGGGATCAGGTATACCGAAATCGCCTTTCCTGGGGTCATCAG‑CATAATCACCAGTACCGCCGCCATAAACAGCAGGCAGATCCAGTTACCCAGCGGATAAAGCAGAGCAGG‑GAAGCGAGTTACCACGCCTTGTTCCTGCTTGGCGCGACGGAATTTCATATGCGCCAGGCTAATCATCGccc < 2:100436/239‑1 (MQ=255) tataaagtctcttttCTTTTTAAACAGATCCCCTATCCCAAACGCGATCCGCCACCCCGGGAACGGGTATCCCGAACTCCCCATCCCGGGGATCAACAG‑CATAACCCCAAGTCCCGCCGCCATAAACAGCAGGCAGATCCAGTTACCCAGCGGATAAAGCAGAGCAGG‑GAAGCGAGTTACCACGCCTTGTTCCTGCTTGGCGCGACGGAATTTCATATGCGCCAGGCTAATCATCGccc < 1:436591/228‑1 (MQ=255) ggttttGGCGGTTTTCTCTTAAAACAGATAGCCGATCCCTAAACCGATCAGCCATCCCGGGATAGGGTAGACCGAACTCGCAATTCCGGGGGTCATCAG‑CATAATCCCCAGTCCCGCCGCCATAAACAGCAGGCAGATCCAGTTACCCAGCGGATAAAGCAGAGCAGG‑GAAGCGAGTTACCACGCCTTGTTCCTGCTTGGCGCGACGGAATTTCATATGCGCCAGGCTAATCATCGccc < 2:286062/236‑1 (MQ=255) ttGGCGGTTTTCTCTTTAAACAGATAGCCGATACCTAACACGATCAGCCATACCGGGATCAGGTATACCGAAATCGCCATTCCTGGGGTCATCAG‑CATAATCACCAGTACCGCCGCCATAAACAGCAGGCAGATCCAGTTACCCAGCGGATAAAGCAGAGCAGG‑GAAGCGCAGTACCACGCCCTGTTCCTGCTTTGCCCGACGGAATTTCCAATGCGCCAGGCTAATCATCACCCCGtt > 2:501665/1‑239 (MQ=255) ttGGCGGTTTTCTCTTTAAACAGATAGCCGATACCTAACACGATCAGCCATACCGGGATCAGGTATACCGAAATCGCCATTACTGGGGTCATCAG‑CATAATCACCCGTACCGCCGCCATAAACAGCAGGCAGATCCAGCTAACCAACGGGTAAAGCAGCACAGGCAAAGCG‑GTTACCACACCTTGTTCCTGCTTATGGCGACCGAATTTCAAAGGGGCCCGCCCAAACACCCCCCAGtt > 1:182079/1‑239 (MQ=255) ggCGGTTTTCTCTTTAAACAGATAGCCGATACCTAACACGATCAGCCATACCGGGATCAGGTATACCGAAATCGCCATTCCTGGGGTCATCAG‑CATAATCACCAGTACCGCCGCCATAAACAGCAGGCAGATCCAGTTACCCAGCGGATAAag > 2:502604/1‑153 (MQ=255) gTTTTCTCTTTAAACAGATAGCCGATACCTAACACGATCAGCCATACCGGGATCAGGTATACCGAAATCGCCATTCCTGGGGTCATCAG‑CATAATCACCAGTACCGCCGCCATaaa > 2:427632/1‑116 (MQ=255) ttttttttttAAACAGATTGCCTAACCCAAAACCGACCCCCCAACCCGTGATCGGGTAAACCAAACCCGCCTTTCGGGGGGTCATCAG‑AATAACCACAAGTACCGCCGCCATAAACAGCAGGCAGATCCAGTTACCCAGCGGATAAAGCAGAGCAGG‑GAAGCGAGTTACCACGCCTTGTTCCTGCTTGGCGCGACGGAATTTCATATGCGCCAGGCTAATCATCGCCCAGTTGATTAcc < 1:30986/239‑1 (MQ=255) aCAGATAGCCGATACCTAACACGATCAGCCATACCGGGATCAGGTATACCGAAATCGCCATTCCTGGGGTCATCAG‑CATAATCACCAGTACCGCCGCCATAAACAGCAGGCAGATCCAGTTACCCAGCGGATAAAGCAGAGCAGG‑GAAGCGAGTTACCACGCCTTGTTCCTGCTTGGCGCGACGGAATTTCATATGCGCCAGGCTAATCATCGCCCAGTTGATTAc > 2:436591/1‑226 (MQ=255) tACCTAACACGATCAGCCATACCGGGATCAGGTATACCGAAATCGCCATTCCTGGGGTCATCAG‑CATAATCACCAGTACCGCCGCCATAAACAGCAGGCAGATCCAGTTACCCAGCGGATAAAGCAGAGCAGG‑GAAGCGAGTTACCACGCCTTGTTCCTGCTTGGCGCGACGGAATTTCATATGCGCCAGGCTAATCATCGCCCAGTTGTTTACCCGGGCAGATACCACCACCGCCAtt > 2:932555/1‑239 (MQ=255) acacGATCAGCCATACCGGGATCAGGTATACCGAAATCGCCATTCCTGGGGTCATCAG‑CATAATCACCAGTACCGCCGCCATAAACAGCAGGCAGATCCAGTTACCCAGCGGATAAAGCAGAGCAGG‑GAAGCGAGTTACCACGCCTTGTTCCTGCCTGGCGCGACGGAATTTCATATGCGCCAGGCTAATCATCGCCCAGTTGATTACCAGTGCAGATACCACCAGCGCCATTAACAg > 2:469805/1‑238 (MQ=255) tCAGCCATACCGGGATCAGGTATACCGAAATCGCCATTCCTGGGGTCATCAG‑CATAATCACCAGTACCGCCGCCATAAACAGCAGGCAGATCCAGTTACCCAGCGGATAAAGCAGAGCAGG‑GAAGCGAGTTACCACGCCTTGTTCCTGCTTGGCGCGACGGAATTTCATATGCGCCAGGCTAATCATCGCCCAGTTGATTACCAGTGCAGATACCACCAGCGCCATTAACAGTCCGaaa > 2:537578/1‑239 (MQ=255) tCAGCCATACCGGGATCAGGTATACCGAAATCGCCATTCCTGGGGTCATCAG‑CATAATCACCAGTACCGCCGCCATAAACAGCAGGCAGATCCAGTTACCCAGCGGATAAAGCAGAGCAGG‑GAAGCGAGTTACCACGCCTTGTTCCTGCTTGGCGCGACGGAATTTCATATGCGCCAGGCTAATCAGCGCCCAGTTGATTACCAGTGCAGATACCACCAGCGCCCTTACCAGTCCGcaa > 2:976805/1‑239 (MQ=255) gCCATACCGGGATCAGGTATACCGAAATCGCCATTCCTGGGGTCATCAG‑CATAATCACCAGTACCGCCGCCATAAACAGCAGGCAGATCCAGTTACCCAGCGGATAAAGCAGAGCAGG‑GAAGCGAGTTACCACGCCTTGTTCCTGCTTGGCGCGACGGAATTTCATATGCGCCAGGCTAATCATCGCCCAGTTGATTACCAGGGCAGATACCACCAGCGCCATTAACAGTCCGAAAGCg > 2:51677/1‑239 (MQ=255) cattACCGGAACCAGGTGACCCGAAACCGCCA‑TCCCGGGGTTAACAGAAATAATCCCCAGTCCCGCCGCCATAAACAGCAGGCAGATCCAGTTACCCAGCGGATAAAGCAGAGCAGG‑GAAGCGAGTTACCACGCCTTGTTCCTGCTTGGCGCGACGGAATTTCATATGCGCCAGGCTAATCATCGCCCAGTTGATTACCAGTGCAGATACCACCAGCGCCATTAACAGTCCGAAAGCg < 2:113857/235‑1 (MQ=255) aCCGGGCTCAGGTATACCGAAATCGCAATTCCTGGGGTCATCCG‑CATAATCACCAGTACCGCCGCCATAAACAGCAGGCAGATCCAGTTACCCAGCGGATACAGCAGAGCAGG‑GAAGCGAGTTACCACGCCTTGTTCCTGCTTGGAGCGACGGAATTTCATATGCGCCAGGACAATCACCGCCCCGTTGATTACCAGTGACATTACAACCAGCGCCATTACAAGGCCGAAAGAggcccc > 1:724519/1‑235 (MQ=255) aCCGGGATCAGGTATACCGAAATCGCCATTCCTGGGGTCATCAG‑CATAATCACCAGTACCGCCGCCATAAACAGCAGGCAGATCCAGTTACCCAGCGGATAAAGCAGAGCAGG‑GAAGCGAGTTACCACGCCTTGTTCCTGCTTGGCGCGACGGAATTTCATATGCGCCAGGCTAATCATCGCCCAGTTGATTACCAGTGCAGATACCACCAGCGCCATTAACAGTCCGAAAGCGGActc > 2:614817/1‑239 (MQ=255) aCCGGGATCAGGTATACCGAAATCGCCATTCCTGGGGTCATCAG‑CATAATCACCAGTACCGCCGCCATAAACAGCAGGCAGATCCAGTTACCCAGCGGATAAAGCAGAGCAGG‑GAAGCGAGTTACCACGCCTTGTTCCTGCTTGGCGCGACGGAATTTCATATGCGCCAGGCTAATCATCGCCCAGTTGATTACCAGTCCAGTTACCACCCGCGCCATTAACAGTCCGAAAACGGAccc > 1:861533/1‑237 (MQ=255) gggATCAGGTATCCCGAAACCCCCATTCCGGGGGTCATCAG‑CATAACCCCCAGTCCCGCCGCCATAAACAGCAGGCAGATCCAGTTACCCAGCGGATAAag < 1:358138/101‑1 (MQ=255) aTCAGGTATACCGAAATCGCCATTCCTGGGGTCATCAG‑CATAATCACCAGTACCGCCGCCATAAACAGCAGGCTGATCCAGTTACCCAGCGGATAAAGCAGCGCAGG‑GAAGCGAGTTACCACGCCTTGTTCCTGCTTGGCGCGACGGAATTTCATATCTGCCAGCCTAATCATCGCCCCGTTGATTCCCAGTGCCATTACAACCAGCGCCCTTAACacaccaaaacagatcccctggg > 1:113857/1‑217 (MQ=255) aTCAGGTATACCGAAATCGCCATTCCTGGGGTCATCAG‑CATAATCACCAGTACCGCCGCCATAAACAGCAGGCAGATCCAGTTACCCAGCGGATAAAGCAGAGCAGG‑GAAGCGAGTTACCACGCCTTGTTCCTGCTTGGCGCGACGGAATTTCATATGCGCCAGGCTAATCATCGCCCAGTTGATTACAAGGGCAGATACCACCAGCGCCATTAACAGTCCGAAAGCGGACCCTGGGGc > 2:756620/1‑239 (MQ=255) aTCAGGTATACCGAAATCGCCATTCCTGGGGTCATCAG‑CATAATCACCAGTACCGCCGCCATAAACAGCAGGCAGATCCAGTTACCCAGCGGATAAAGCAGAGCAGG‑GAAGCCAGTTACCAAGCCTTGTTCCTGCTTGGCGCCACGGAATTTCCTATGAGCCAGGCTAATCATCGCCCAGTTGCTTACCAATGCCGCAACCACCCGCCCCCATAACAATACGAAAACGGCCACTGGGGc > 1:70826/1‑239 (MQ=255) aTCAGGTATACCGAAATCGCCATTCCTGGGGTCATCAG‑CATAATCACCAGTACCGCCGCCATAAACAGCAAGCAGATCCAGTTACCCAGCGGATAAAGCAGAGCAGG‑GAAGCGAGTAACCACGCCTTGTTCCTGCTTGGCGCGACGGAATTTCATATGGGCCAGGCTAATAATCGCCAAGTTGATTACCAGGGCAGTAACACCCATGCCCATTAACAGACCGAAAGGGAGCCCTGGGGc > 1:771901/1‑239 (MQ=255) cAGGTATCCCAAACCCGCCATTCTGGGGGCAATCAG‑AATAACCCCCATCACCGCCGCCATAAACAGCAGGCAGATCCAGTTACCCAGCGGATAAAGCAGAGCAGG‑GAAGCGAGTTACCACGCCTTGTTCCTGCTTGGCGCGACGGAATTTCATATGCGCCAGGCTAATCATCGCCCAGTTGATTACCAGTGCAGATACCACCAGCGCCATTAACAGTCCGAAAGCGGACTCTGGGGCaa < 2:555294/239‑1 (MQ=255) aGGTATACCGAAATCGCCATTCCTGGGGTCATCAG‑CATAATCACCAGTACCGCCGCCATAAACAGCAGGCAGATCCCGTTACCCAGCGGATAAAGCAGAGCAGG‑GAAGCGAGTTACCACGCCTTGTTCCTGCTTGGCGCGACGGAATTTCATATGCGCCAGGCTAATCATCGCCCAGTTGATTACCAGTGCAGATACCACCAACGCCATTAACAGTCCGAAAGCGGACCCTGTGGCAAg > 2:353119/1‑239 (MQ=255) aGGTATACCGAAATCGCCATTCCTGGGGTCATCAG‑CATAATCACCAGTACCGCCGCCATAAACAGCAGGCAGATCCAGTTACCCAGCGGATAAAGCAGAGCAGG‑GAAGCGAGTTACCACGCCTTGTTCCTGCTTGGCGCGACGGAATTTCATATGAGCCAGGCTAATCATCGCCCAGTTGATTACCAGTGCAGATACCACCAACGCCCTTAACAACCCGAAAAGGGACCCTGGGGaaaa > 1:309909/1‑238 (MQ=255) gtaccccGAAATCGCCATCCCTGGGGCCCTCAG‑CAAAATCCCCAGTCCCGCCGCCATAAACAGCAGGCAGATCCAGTTACCCAGCGGATAAAGCAGAGCAGG‑GAAGCGAGTTACCACGCCTTGTTCCTGCTTGGCGCGa < 1:288974/134‑1 (MQ=255) tataCCGAAATCGCCATCCCGGGGGTCATCAG‑CAAAACCCCCAGTCCCGCCGCCATAAACAGCAGGCAGATCCAGTTACCCAGCGGATAAAGCAGAGCAGG‑GAAGCGAGTTACCACGCCTTGTTCCTGCTTGGCGCGACGGAATTTCATATGCGCCAGGCTAATCATCGCCCAGTTGATTACCAGTGCAGATACCACCAGCGCCATTAACAGTCCGAAAGCGGACTCTGGGGCAAgg < 2:325121/237‑1 (MQ=255) ataCCGAAATCGCCATTCCTGGGGTCATCAG‑CATAATCACCAGTACCGCCGCCATAAACAGCAGGCAGATCCAGTTACCCAGCGGATAAAGCAGAGCAgg‑g > 2:358138/1‑101 (MQ=255) taCCGAAATCGCCATTCCTGGGGTCATCAG‑CATAATCACCAGTACCGCCGCCATAAACAGCAGGCAGATCCAGTTACCCAGCGGATAAAGCAGAGCAGG‑GAAGCGAGTTACCACGCCTTGTTCCTGCTTGGCGCGACGGAATTTCATATGCGCCAGGCTAATCATCGCCCAGTTGATTACCAGTGCAGATACCACCAGCGCCATTAACAGTCCGAAAGCGGACTCTGGGGCAAGGTAGt > 2:365389/1‑239 (MQ=255) aCCGAAATCGCCATTCCTGGGGTCATCAG‑CATAATCACCAGTACCGCCGCCATAAACAGCAGGCAGATCCAGTTAcc > 2:822257/1‑77 (MQ=255) caaaacccccATTCCGGGGTTCACAAC‑CAAAACCCCAAGTCCCGCCGCCATAAACAGCAGGCAGATCCAGTTACCCAGCGGATAAAGCAGAGCAGG‑GAAGCGAGTTACCACGCCTTGTTCCTGCTTGGCGCGACGGAATTTCATATGCGCCAGGCTAATCATCGCCCAGTTGATTACCAGTGCAGATACCACCAGCGCCATTAACAGTCCGAAAGCGGACTCTGGGGCAAGGTAGTTaa < 2:932764/231‑1 (MQ=255) aaaTCGCCATTCCTGGGGTCATCAG‑CATAATCACCAGTACCGCCGCCATAAACAGCAGGCAGATCCAGTTACCCAGCGGATAAAGCAGAGCAGG‑GAAGCGAGTTACCACGCCTTGTTCCTGCTTGGCGCGACGGAATTTCATATGCGCCAGGCTAata > 2:5278/1‑157 (MQ=255) aaaTCGCCATTCCTGGGGTCATCAG‑CATAATCACCAGTACCGCCGCCATAAACAGCAGGCAGATCCAGTTACCCAGCGGATAAAGCAGAGCAGG‑GAAGCGAGTTACCACGCCTTGTTCCTGCTTGGCGCGACGGAATTTCATATGCGCCAGGCTAATCATCGCCCAGTTGATTACCAGTGCAGAt > 2:762274/1‑185 (MQ=255) aaaTCGCCATTCCTGGGGTCATCAG‑CATAATCACCAGTACCGCCGCCATAAACAGCAGGCAGATCCAGTTACCCAGCGGATAAAGCAGAGCAGG‑GAAGCGAGTTACCACGCCTTGTTCCTGCTTGGCGCGACGGAATTTCATATGCGCCAGGCTAATCATCGCCCAGTTGATTACCAGTGCAGATACCACCAGCGCCATTAACAGTCCGAAAGCGGACTCTGGGGCAAGGAAGGTaacc > 1:149425/1‑237 (MQ=255) aaaTCGCCATTCCTGGGGTCATCAG‑CATAATCACCAGTACCGCCGCCATAAACAGCAGGCAGATCCAGTTACCCAGCGGATAAAGCAGAGCAGG‑GAAGCGAGTTACCACGCCTTGTTCCTGCTTGGCGCGACGGAATTTCATATGCGCCAGGCTAATCATCGCCCAGTTGATTACCAGTGCAGATACAACCAGCGCCATGAACAGTCCGAAAGCGGACTCTGGGGCAAGGGAGTTAATc > 2:845504/1‑239 (MQ=255) aTCGCCATTCCTGGGGTCATCAG‑CATAATCACCAGTACCGCCGCCATAAACAGCAGGCAGATCCAGTTACCCAGCGGa > 2:966259/1‑78 (MQ=255) aTCGCCATTCCTGGGGTCATCAG‑CATAATCACCAGTACCGCCGCCATAAACAGCAGGCAGATCCAGTTACCCAGCGGATAAAGCAGAGCAGG‑GAAGCGAGTTACCACGCCTTGTTCCTGCTTGGCGCGACGGAATTTCa > 2:288974/1‑139 (MQ=255) gCCATTCCTGGGGTCATCAG‑CATAATCACCAGTACCGCCGCCATAAACAGCAGGCAGATCCAGTTACCCAGCGGATAAAGCAGAGCAGG‑GAAGCGAGTTACCACGCCTTGTTCCTGCTTGGCGCGACGGAATTTCATATGCGCCAGGCTAATCATCGCCCAGTTGATTAc > 2:997217/1‑170 (MQ=255) tcgggggcactcgaG‑CATAACCCCCAGTCCCGCCGCCATAAACAGCAGGCAGATCCAGTTACCCAGCGGATAAAGCAGAGCAGG‑GAAGCGAGTTACCACGCCTTGTTCCTGCTTGGCGCGACGGAATTTCATATGCGCCAGGCTAATCATCGCCCAGTTGATTACCAGTGCTGATACCGCCAGCGCCATTAACAGTCCGAAAGCGGACTCTGGGGCAAGGTAGTTAATCAGTACGcaca < 2:182079/226‑1 (MQ=255) tCCTGGGGTCATCAG‑CATAACCACCAGTACCGCCGCCATAAACAGCAGGCAGATCCAGTTACCCAGCGGATAAAGCAGAGCAGG‑GAAGCGAGTTACCACGCCTTGTTCCTGCTTGGCGCGACGGAATTTCATATGCGCCAGGCTAATCATCGCCCAGTTGATTACCAGTGCAGATACCACCAGCGCCATTAACAGTCCGAAAGCGGACTCTGGGGCAAGGTAGTTAATCAGTACGcaca < 2:861533/239‑1 (MQ=255) gccgggggACATCAA‑CAAAACCCCCAGTCCCGCCGCCATAAACAGCAAGCAGATCCAGTTACCCAGCGGATAAAGCAGAGCAGG‑GAAGCGAGTTACCACGCCTTGTTCCTGCTTGGCGCGACGGAATTTCATATGCGCCAGGCTAATCATCGCCCAGTTGATTACCAGTGCAGATACCACCAGCGCCATTAACAGTCCGAAAGCGGACTCTGGGGCAAGGTAGTTAATCAGTACGcaca < 2:771901/235‑1 (MQ=255) cccTGGGGACCACAG‑CAAATCCCCCGGTACCGCCGCCATAAACAGCAGGCAAGTCCAGTTACCCAGCGTATAAAGCAGAGCAGG‑GAAGCGAGTGACCACGCCTTGTTCCTGCTTGGCGCGACGGAATTTCATATGCGCCAGGCTAATCATCGCCCAGTTGATTACCAGTGCAGATACCACCAGCGCCATTAACAGTCCGAAAGCGGACTCTGGGGCAAGGTAGTTAATCAGTACGcaca < 2:452704/238‑1 (MQ=255) atcaG‑CATAATCACCAGTACCGCCGCCATAAACAGCAGGCAGATCCAGTTACCCAGCGGATAAAGCAGAGCAGG‑GCAGCGGGTTACCACGCCTTGTTCCTGCTTGGCGCGACGGAATTTCATATGCGCCAGGCTAATCATCGCCCAGTTGATTACCAGTGTAGATACACCCCGCGCCATTATCAGTCCGAAACCGACCACTGGCGAAAGGCCGTTAAACATTAAGccaaaccacgtaac > 1:383301/1‑226 (MQ=255) atcaG‑CATAATCACCAGTACCGCCGCCATAAACAGCAGGCAGATCCAGTTACCCAGCGGATAAAGCAGAGCAGG‑GAAGCGAGTTACCACGCCTTGTTCCTGCTTGGCGCGACGGAATTTCATATGCGCCAGGCTAATCATCGCCCAGTTGATTACCAGTGCAGATACCACCAGCGCCATTAACAGTCCGAAACCGGACCCTgggg > 2:645106/1‑205 (MQ=255) aCCAGACCCGCGCCCATAAACAGCGGGCAGATCCAGTTGCCCAGCGGATAAAGAAGAGCAGG‑GAAGGGATTTGCCCCGCCTTGTTCCTGGTTGGCGCGACGGAATTTCATATGCGCCAGGCTAATCATCGCCCAGTTGATTCCCAGTGCAGATACCACCAGCGCCATTAACAGTCCGAAAGCGTACTCTGGGGCAAGTTAGTTAATCAGTACGCACAACGCCGTTACCAGTGCAGacac < 1:303724/239‑1 (MQ=255) | CCTCGTTCGTGGTCGTGGTGGTGATTGCACTACTGACGATTTACGGGGCGTTGGTGTAAAGATTATTGCCCTCACCCTG‑TACGGGTGAGGGCGTAGAGAGATTAATGCGCTTTTACG‑GCTTTGGCGGTTTTCTCTTTAAACAGATAGCCGATACCTAACACGATCAGCCATACCGGGATCAGGTATACCGAAATCGCCATTCCTGGGGTCATCAG‑CATAATCACCAGTACCGCCGCCATAAACAGCAGGCAGATCCAGTTACCCAGCGGATAAAGCAGAGCAGG‑GAAGCGAGTTACCACGCCTTGTTCCTGCTTGGCGCGACGGAATTTCATATGCGCCAGGCTAATCATCGCCCAGTTGATTACCAGTGCAGATACCACCAGCGCCATTAACAGTCCGAAAGCGGACTCTGGGGCAAGGTAGTTAATCAGTACGCACAACGCCGTTACCAGTGCAGACAC > NC_000913/120077‑120537 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |