| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,208,990 | A→C | 20.1% | T342T (ACA→ACC) | yehP → | VMA domain putative YehL ATPase stimulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,208,990 | 0 | A | C | 20.1% | 114.1 / 3.0 | 56 | T342T (ACA→ACC) | yehP | VMA domain putative YehL ATPase stimulator |
| Reads supporting (aligned to +/- strand): ref base A (33/9); new base C (2/11); total (35/21) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.20e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGCCGTGGAGTATGGTCGGCAACTTATTGAACAACCAGCGAAAAGCGTCATTATCCTCGTGAGCGATTTTTACGAAGGGGGTTCATCATCATTACTGACGCATCAGGTGAAAAAGT‑GTGT‑CCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAG‑CACCGCAACACC‑TTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTC‑GGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCGTTAA‑GCAATG‑CC‑GGTTTTGTTAAGCGCAGTCTTAAGGAACTGGAAAATGGCAACGTCCCG > NC_000913/2208760‑2209211 | gCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGCCGTGGAGTATGGTCGGCAACTTATTGAACAACCAGCGAAAAGCGTCATTATCCTCGTGAGCGATTTTTACGAAGGGGGTTCATCATCATTACTGACGCATCAGGTGAAAAAGT‑GTGT‑CCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAG‑CACCGCAACACC‑TTGCTa > 2:17564/1‑239 (MQ=255) agagTTATTAATGAAAGAACAGTTGGGCGGCGGGACCAATATCGCCAGTGCCGTGGAGTATGGTCGGCAACTTATTGAACAACCAGCGAAAAGCGTCATTATCCTCGTGAGCGATTTTTACGAAGGGGGTTCATCATCATTACTGACGCATCAGGTGAAAAAGT‑GTGT‑CCAGAGCGGCATCAAAGGGCTGGGACTGGCAGCGCTCGATAG‑CACCGCAACACC‑TTGCTATGACCGCGATa > 2:60999/1‑239 (MQ=255) tgcaaGTACAGTTGGGCGGCGGGATCAATATCGCCAGTGCCGGGGAGTATGGTCGGCAACTTATTGAACCACCAGCGAAAATCGTCATTATCCTCGTGAGCGATTTTTACGAAGGGGGTTCATCATCATTACTGCCGCATCAGGTGAAAAAGT‑GTGT‑CCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAG‑CACCGCAACACC‑TTGCTATGACCGCGATACGGCCCAGgcg < 2:837352/236‑1 (MQ=255) aaGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGCCGTGGAGTATGGTCGGCAACTTATTGAACAACCAGCGAAAAGCGTCATTATCCTCGGGAGCGATTTTTACGAAGGGGGTTCATCATCATTACTGACGCATCAGGTGAAAAAGT‑GTGT‑CCAGGCGGGAATAAAAGTGCTGGGCTGGGCACCGCACGTAGG‑CACCGCAACCCC‑TTGATATAACCGCGAAACGAGCCAGgcgcgg > 1:953112/1‑237 (MQ=255) ggcggcGGGACCAATATCGCCAGTGCCGTGGAGTATGGTCGGCAACTTATTGAACAACCAGCGAAAAGCGTCATTATCCTCGTGAGCGATTTTTACGAAGGGGGTTCATCATCATTACTGACGCATCAGGTGAAAAAGT‑GTGT‑CCATAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAG‑AACCGCAACACC‑TTGCTATGACCGCGATACGGCCCAAGCGCTGGTTAATGttg > 2:88210/1‑236 (MQ=255) ggcggGACCAATATCGCCAGTGCCGTGGAGTATGGTCGGCAACTTATTGAACAACCAGCGAAAAGCGTCATTATCCTCGTGAGCGATTTTTACGAAGGGGGTTCATCATCATTACTGACGCATCAGGTGAAAAAGT‑GTGT‑CCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAG‑CACCGCAACACC‑TTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTC‑Ggcg < 2:328843/238‑1 (MQ=255) ggACCAATATCGCCAGTGCCGTGGAGTATGGTCGGCAACTTATTGAACAACCAGCGAAAAGCGTCATTATCCTCGTGAGCGATTTTTACGAAGGGGGTTCATCATCATTACTGACGCATCAGGTGAAAAAGT‑GTGT‑CCAGAGCGGCATCAAAGGGCTGGGACTGGCAGCGCTCGATAG‑CCCCGCAACACC‑TTGCTATGACCGCGATACGGCCCCGGCGCGGGTGAAGGTC‑Ggcgccaaa > 1:1018113/1‑235 (MQ=255) ctcctcccccgTGCCGTGGGTTTTGGTAGGAAATTTATTGAAAAATACGTGAAAAGCGTAATTCTCCTGTGGAGGGATTTTTAGGAGGGGGGTTCACCATCTTTCCTGCCGCATCGGGTGAAAAAGT‑GTGT‑CCAGGGCGGCATCAAAGTGCTGGGCCTGGCAGCGCTCGATAG‑CACCGCAACACC‑TTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTC‑GGCGCACAAATAgc < 1:904575/229‑1 (MQ=255) gCCAGTGCCGTGGAGTATGGTCGGCAACTTATTGAACAACCAGCGAAAAGCGTCATTATCCTCGTGAGCGATTTTTACGAAGGGGGTTCATCATCATTACTGACGCATCAGGTGAAAAAGT‑GTGT‑CCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAG‑CACCGCAACACC‑TTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGGGCGC‑CAAATAgccgc > 2:192744/1‑236 (MQ=255) gCCAGTGCCGTGGAGTATGGTCGGCAACTTATTGAACAACCAGCGAAAAGCGTCATTATCCTCGTGAGCGATTTTTACGAAGGGGGTTCATCATCATTACTGACGCATCAGGTGAAAAAGT‑GTGT‑CCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAG‑CACCGCAACACC‑TTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTC‑GGCGCACAAATAGCCGCCAt > 2:297257/1‑239 (MQ=255) gCCGTGGAGTATGGTCGGCAACTTATTGAACAACCAGCGAAAAGCGTCATTATCCTCGTGAGCGATTTTTACGAAGGGGGTTCATCATCATTACTGACGCATCAGGTGAAAAAGT‑GTGT‑CCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAG‑CACCCCAACACC‑TTGCTATGACCGCGATACGGCCCAGGCGCGGGTTAATGTC‑GGCGCACAAAAACACCCCATGACGcc > 1:712730/1‑239 (MQ=255) ggggAGTATGGGCGGCAACTTATTGAACAACCAGCAAAAAGCGTCATTATCCGCGTGAGCGATTTTTACGAAGGGGGTTCATCATCATTACTGACGCATCAGGTGAAAAAGT‑GTGT‑CCAGGGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAG‑CACCGCAACACC‑TTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTC‑GGCGCACAAATAGCCGCCATGACGCCggg < 2:234578/237‑1 (MQ=255) tGGAGTATGGTCGGCAACTTATTGAACAACCAGCGAAAAGCGTCATTATCCTCGTGAGCGATTTTTACGAAGGGGGTTCATCATCATTACTGACGCATCAGGTGAAAAAGT‑GTGT‑CCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAG‑CACCGCAACCCC‑TTGCTAGTACCGCGATACGGCCCAGGCGCTGGTTAAGTTC‑CGGGCCCAAAAAGCCGCCAAGACGCCgggg > 1:5050/1‑238 (MQ=255) tATGGTCGGCAACTTATTGAACAACCAGCGAAAAGCGTCATTATCCTCGTGAGCGATTTTTACGAAGGGGGTTCATCATCATTACTGACGCATCAGGTGAAAAAGT‑GTGT‑CCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAG‑CACCCCAACACC‑TTGCTATGACCCCGATACGGCCCAGGCGCGGTGTAAGGTC‑GGCGCAACAATACCCGCCacacccccgggccggcg > 1:1164/1‑223 (MQ=255) gttggcgggaaattttttaaacaccCAGCAAAAGGTGTAATTACCCGGGGGGGGGATTTTCAGGAAGGGGTTTCATCATCATTACTGACGCATCGGGTGAAAAAGG‑GTGC‑CCAGGGGGGCATAAAAGTGCGGGGACTGGCAGCGCTCGATAG‑CACCGCAACCCC‑TTGCTAGGACCGCGATACGGCCCAGGCGCTGGTTAATGTC‑GGCGCACAAATAGCCGCCATGACGCCGGGCGAGc < 1:297257/219‑1 (MQ=255) ggCAACTTATTGAACAACCAGCGAAAAGCGTCATTATCCTCGTGAGCGATTTTTACGAAGGGGGTTCATCATCATTACTGACGCATCAGGTGAAAAAGT‑GTGT‑CCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAG‑CACCGCAACACC‑TTGCTATGACCGCGATACGGCCCCGGCGCTGGTTAATGTC‑GGCGCCCAAATAGCCGCCATGACGCCGGGCGAGCTGGcacaa > 2:251371/1‑236 (MQ=255) gCAACTTCTTGAACAACCAGCGAAACGCGTCATTATCCTCGTGAGCGATTTTTACGAAGGGGGTTCATCATCATTACTGACGCATCAGGTGAAAAAGT‑GTGT‑CCAGAGCGGCATCAAAGTGCTGGGACTGGCACCGCTCGCTAG‑CACTGCAAAACC‑TTGTGAGGACCGCGAGACGGCCCAGGCGCTGGTTAATGTC‑GGCGCACAAAAAGCCCCCCTGACGCCGGGCGGGCGGGcatcat > 1:290272/1‑239 (MQ=255) gCAACTTATTGAACAACCAGCGAAAAGCGTCATTATCCTCGTGAGCGATTTTTACGAAGGGGGTTCATCATCATTACTGACGCATCAGGTGAAAAAGT‑GTGT‑CCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAG‑CACCGCAACACC‑TTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTC‑GGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGcatcat > 2:741323/1‑239 (MQ=255) gCAACTTATTGAACAACCAGCGAAAAGCGTCATTATCCTCGTGAGCGATTTTTACGAAGGGGGTTCATCATCATTACTGACGCATCAGGTGAAAAAGT‑GTGT‑CCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAG‑CACCCCAACACC‑TTGCTATGACCGCGCTACGGCCCCGTCCCTGGTTAATGTC‑GGCCCCCAAATAACCGCCCACACGCCGGGGGAggcggacaccg > 1:532896/1‑229 (MQ=255) aTTGAACAACCAGCGAAAAGCGTCATTATCCTCGTGAGCGATTTTTACGAAGGGGGTTCATCATCATTACTGACGCATCAGGTGAAAAAGT‑GTGT‑CCAGAGCGGCATCAAAGTGCTGGGACTGGCATCGCTCGATAG‑CACCGCAACACC‑TTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATTTC‑GGCGCACAAATAGCGGCCATGACGCCGGGCGAGCTGGCATCATGGCttac > 2:879507/1‑237 (MQ=255) acCAGCGAAAAGCGTCATTATCCTCGTGAGCGATTTTTACGAAGGGGGTTCATCATCATTACTGACGCATCAGGTGAAAAAGT‑GTGT‑CCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAG‑CACCGCAACACC‑TTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTC‑GTCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTTGGGAGAAtt > 2:966025/1‑238 (MQ=255) acgttttccctcttgggggttttttACGAGGGGGGTTCAGCATCATTCCTGCAGACTCAGTGGAAAAGGT‑GTGC‑CCAGGGCGGCATCAATGTGCTGGGCCTGGCAGCGCTCGATAG‑AACCGCAACACC‑TTGCTAGGACCGCGATACGGCCCGGGCGCTGGTTAATGTC‑GGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGa < 1:339555/217‑1 (MQ=255) aGCGATTTTTACGAAGGGGGTTCATCATCATTACTGACGCATCAGGTGAAAAAGT‑GTGT‑CCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAG‑CACCGCAACACC‑TTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTC‑GGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGGGAATCTTCAGCCATGAATTACCTACggcggtc > 2:339555/1‑232 (MQ=255) tttttGCGAGGGGGGTTCATCCTCATTCGTGA‑GGAACCGAGGAAAAATTGGGGC‑CCAGGGGGGCTTCAAAGGGCGGGGACTTGCAGGGCTAGATAG‑CACCGCACCACC‑TGGCTATGACCGCGATACGGCCCAGGTGTTGGTTAATTTC‑GGCGCACAAATGGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAattatt < 1:741323/239‑1 (MQ=255) ttttgAGGAGGGGGTTTCCTCATCATTATGGCCGATCCGGGGGAAAAAGG‑TTGT‑CCGGGGCGTCTACAAAGCGCTGGGACTGGCAGCCTTGGATGC‑CACCG‑AACTCCGTTGCTATGACCGCGAGACGGCCCAGGCTCGGGTTAAGGTA‑AGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAattatt < 1:947280/239‑1 (MQ=255) gggggTTCATCATCATTACTGACGCATCAGGTGAAAAAGT‑GTGT‑CCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAG‑CACCGCAACACC‑TTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTC‑GGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGGATTCACTTCGTCCGGGATTATTTGAACTGac > 2:705838/1‑238 (MQ=255) gggggTTCATCATCATTACTGACGCATCAGGTGAAAAAGT‑GTGT‑CCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAG‑CACCGCAACACC‑TTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTC‑GGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGACTTATTAGAACTGac > 2:928223/1‑238 (MQ=255) atttctggccgcagagggTAAAAAGGT‑TTGT‑CCGGGGCGGCAAAAAAGTGCTGGGCTTGGCAGCGCTCGATAG‑CACCGCAACCAC‑TTCCTAGGACCGCGATACGGCCCAGGCGGTGGTTAATGTC‑GGCCCAAAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGa < 1:17564/223‑1 (MQ=255) cTGGCGCATCAGGTGAAAAAGT‑GTGT‑CCAGGGCGGCATCAAAGTGCTGGGACGGGCAGCGCTCGATAG‑CACCGCAACACC‑TTGCTATGACCGCGATCCGGCCCAGGCGCTGGTTAATGTC‑GGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCg < 2:1164/239‑1 (MQ=255) cTGACGCATCAGGTGAAAAAGT‑GTGT‑CCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAG‑CACCGCAACACC‑TTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTC‑GGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACCCCGCAGGCCCTGACGGCg > 2:370509/1‑239 (MQ=255) ctgaggcctaGGGGAAAAAGG‑GTGTCCCAGGGGGGCAAAAAGGTGCTGGGTGTGGAAG‑GCTCCAAAGACACCAAAAACCC‑TGGTGATGCCCGGAATGCGCCCCGGGCGCTGGTTAATGCC‑GGGCCAAAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCg < 1:705838/230‑1 (MQ=255) cGCATCAGGTGAAAAAGT‑GTGT‑CCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAG‑CACCGCAACACC‑TTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTC‑GGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGCATTCACTCCGCCCGCAATTATTAGAAATGACACCGCAGGCCCAGGCGGGGTTaa > 1:970823/1‑239 (MQ=255) ataaGGTGAAAAAGT‑GTGC‑CCAGGGCGGCATAAAAGTGCTGGGACGGGAAGGGCTCGATAG‑CCCCGCAACCCC‑TTGCTAGGACCGCGATACGGCCCAGGCGCTGGTTAATGTC‑GGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGa < 2:142868/224‑1 (MQ=255) tCAGGTGAAAAAGT‑GTGT‑CCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAG‑CACCGCAACACC‑TTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTC‑GGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCCCTACGTCCGGAATTATTAAAAATGACACCGCAGGCCCTGCCGGCGTTAA‑GCaa > 2:7053/1‑239 (MQ=255) taaaaacGT‑GTGT‑CCAGAGCGCAATCAAAGTGCTGGGACTGTCAGCGCTCGATAG‑CACCGCAACACC‑TTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGCC‑GGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCGTTAA‑GCAATG‑c < 2:953112/235‑1 (MQ=255) aaaaGG‑GTGT‑CAAGGGGGGCATCAAGGTGCTGGGACTGGCAGGCCTCGATAG‑CCCCGCACCCCC‑TTGCTATGACCGGGATACGGCCCAGGCGCTGGTTAATGTC‑GGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCGTTAA‑GCAATG‑CC‑GGtt < 2:5050/239‑1 (MQ=255) gtgt‑CCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAG‑CACCGCAACACC‑TTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTC‑GGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCCTGAATTCACTACGTCCGGAATTATTAGAACTGACACCGACAGCCCTTCAGGCGTTAA‑GGCATG‑CCGGGTTTTGta > 2:369973/1‑238 (MQ=255) t‑CCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAG‑CACCGCAACACC‑TTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTC‑GGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAg > 2:116638/1‑158 (MQ=255) tgtgtaaaaggaacaggTGCGGGGACGGGCAGCGCTCGATAG‑CCCCGAAACCCC‑TTGCTATGCCCGCGATACGGCCCAGGCGCTGGTTAATGTC‑GGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCGTTAA‑GCAATG‑CC‑GGTTTTGTTAAgcg < 2:315591/223‑1 (MQ=255) ccAGAGCGGACTAAAAGGGCGGGGACTGGCAGCGCTCGATAG‑CCCCGCAACCCC‑TTGCTATGCCCGCGATCCGGCCCAGGCGCTGGTTAATGTC‑GGCGCAAAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCGTTAA‑GCAATG‑CC‑GGTTTTGTTAAgcg < 2:1018113/239‑1 (MQ=255) cAGGGCGGCATCAAACTGGTGGGATTGGCACGGCTCGGTAG‑CACCGCAACCCA‑TTGATATGACCGCGATACGGCCCAGGCGCTGGTTAATGGC‑GGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCGTTAA‑GCAATG‑CC‑GGTTTTGTTAAgcg < 2:290272/238‑1 (MQ=255) aggtggttaaaaGAGCCGGGACTGGCAGCGCTCAATAG‑CACCGAAACCCT‑TTGCTATGACCGAGATGCGGCCCAGGCGCTGGTTAATGTC‑GGCGCAAAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCGTTAA‑GCAATG‑CC‑GGTTTTGTTAAGCGCAg < 2:990092/229‑1 (MQ=255) gCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAG‑CACCGCAACACC‑TTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTC‑GGCGCACAAATACACGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGGGAAACATCCGCCATTGGTTACATACGCCCGGAATTGTTTGGACTTGCACCCCCAGCCCCGCAGGCATTAA‑AAAAAGCCC‑GGTTTTTTTaaa > 1:385565/1‑232 (MQ=255) cTGGGACTGGCAGCGCTCGATAG‑CACCGCAACACC‑TTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTC‑GGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGGCAATCTTCAGTCCTGAATTCACTAAGTCCCGAATTATTTTAACTGAACCCCCAGGCCCTAACGCCGTTAA‑GACATG‑CC‑GGTTTTTTTAAGGCCAGCCTTAAGGAAATGGaa > 1:243220/1‑239 (MQ=255) gggACTGGCAGCGCTCGATAG‑CACCGCAACACC‑TTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTC‑GGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCGTTAA‑GCa > 2:338006/1‑199 (MQ=255) ggcggcGCTCGATAG‑CCCCGCAACACC‑TTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTC‑GGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCGTTAA‑GCAATG‑CC‑GGTTTTGTTAAGCGCAGTCTTAAGGAACTGGAAAATGGCaa < 2:712730/239‑1 (MQ=255) ggCAGCGCTCGATAG‑CACCGCAACACC‑TTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTC‑GGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGGGAATCTTCAGTCCTGAATTCACTACGTCCCGAATTATTAGAACTGACACCCCCGGGCCTGACGGCCTTAA‑ACAATG‑CC‑GGGTTTTTTAAGCGCAGGCCTaaaggtggtctttaaaaaaa > 1:315591/1‑221 (MQ=255) ggCAGCGCTCGATAG‑CACCGCAACACC‑TTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTC‑GGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGGGAATCTTCAGCCATGAATTCACAACGTCCGGAATTATTTAAACTGTAACCCCCAGCCCCGGTGCGGGTAA‑TCAATA‑CCGGGTTTTTTTAAG‑GCAGGCTTAAAGAACAGGGAAAGGGGaa > 1:963665/1‑239 (MQ=255) ggcaggcccgaaaagcccggCAACCCC‑TTGCTAGGACCGCGAACCGGCCCGGGCGCTGGTTAATGTC‑GGCGCAAAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCGTTAA‑GCAATG‑CC‑GGTTTTGTTAAGCGCAGTCTTAAGGAACTGGAAAATGGCa < 2:243220/219‑1 (MQ=255) cAGCGCTCGATAG‑CACCGCAACACC‑TTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTC‑GGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGCATTATTTGAACTGGCACCCCCGGCCCTGACGGAGTTAA‑GCAATG‑CC‑GGGTTTTTTAAAACCCGCATTAAGAAACGGGaaaaaaggaaag > 1:55479/1‑231 (MQ=255) cAGCGCTCGATAG‑AACCGCAACACC‑TTGATATGACCGCGATACGGCACAGGCGCTGGTTAATGTC‑GGCGCACAAATAGCCGCCATTAAGCCGGGCGAGCTGGCATCATGGCTTTCGGCGAATCTTCAGTCCTGAATTCACTCCGCCCGGAAATCTTAGAACCGAAACCCCCGGCCCTGACGGCGCTAACGCAA‑G‑CC‑CGTTTTGTTTAGGGCGCACTCTAGGAACAGGAAAAAAGCaaag > 1:190628/1‑237 (MQ=255) cgcTCGATAG‑CACCGCAACACC‑TTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTC‑GGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCGTTAA‑GAAATG‑CC‑GGTTTTTTTAAGTGCCGCCTTAAGGAACTGGAAAATGGCAACGTc > 2:906291/1‑238 (MQ=255) gcTCGATAG‑CACCGCAACCCC‑TTGCTATGCCCGCCATACGGCCCAGGCGCTGGTTAATGTC‑GGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCGTTAA‑GCAATG‑CC‑GGTTTTGTTAAGCGCAGTCTTAAGGAACTGGAAAATGGCAACGTcc < 2:545872/238‑1 (MQ=255) cTCGATAG‑CACCGCAACACC‑TTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTC‑GGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGGGAATCTTCAGGCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCGTTAA‑GCAATG‑CC‑GGTTTTGTTAAGAGCAGTCTTAAGGAACTGGAAAATGGGCACGTGCCg > 2:413215/1‑239 (MQ=255) cTCGATAG‑CACCGCAACACC‑TTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTC‑GGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCCTGAATTCACTACGTCCGGAATTTTTAGAACTGACACCCCAGGCCCCGCCGGCGTTAA‑GCAATT‑CC‑GGGTTTGTTAACGGCCGTCTTAAGGAACTGGCACAAGGCACCGCCCCg > 2:782581/1‑239 (MQ=255) cAACACC‑TTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTC‑GGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCGTTAA‑g > 2:103939/1‑171 (MQ=255) | GCCGATCCGGTAGAGTTATTAATGAAAGTACAGTTGGGCGGCGGGACCAATATCGCCAGTGCCGTGGAGTATGGTCGGCAACTTATTGAACAACCAGCGAAAAGCGTCATTATCCTCGTGAGCGATTTTTACGAAGGGGGTTCATCATCATTACTGACGCATCAGGTGAAAAAGT‑GTGT‑CCAGAGCGGCATCAAAGTGCTGGGACTGGCAGCGCTCGATAG‑CACCGCAACACC‑TTGCTATGACCGCGATACGGCCCAGGCGCTGGTTAATGTC‑GGCGCACAAATAGCCGCCATGACGCCGGGCGAGCTGGCATCATGGCTTGCGGAGAATCTTCAGTCATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCCCTGACGGCGTTAA‑GCAATG‑CC‑GGTTTTGTTAAGCGCAGTCTTAAGGAACTGGAAAATGGCAACGTCCCG > NC_000913/2208760‑2209211 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |