| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,277,507 | A→G | 17.1% | E58G (GAG→GGG) | yhaV → | toxin of the SohB(PrlF)‑YhaV toxin‑antitoxin system |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,277,507 | 0 | A | G | 17.1% | 159.7 / 3.5 | 67 | E58G (GAG→GGG) | yhaV | toxin of the SohB(PrlF)‑YhaV toxin‑antitoxin system |
| Reads supporting (aligned to +/- strand): ref base A (11/42); new base G (10/2); total (21/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.68e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ACAAGGAAAGAAACTTGTCGCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGG‑TTAATGGTTGGGCG‑CTATATG‑CTCATCCCTGTTTTCAGGAAA‑CCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTA‑GTCCA‑TAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCAT‑GGCAAGTCGTTAGGCTCTGGGAAAAATAAAGAC‑TGGTCACGGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGAAAACACTCTGCGCACCTACGGTAAAAAAACAGATGCCTATACCGTATTCAGCAAAATGTTAAAAAG > NC_000913/3277269‑3277741 | acaaGGAAAGAAACTGGTCGCTGGTGTGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTCCCACAAAGGG‑TTAATGGTTGGGCG‑CTATATG‑CTCATCCCTGTTTTCAGGAAA‑CCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGAAAAAGATCCTAAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTA‑GTCCA‑TAAAGTGATTgagga < 2:454325/239‑1 (MQ=255) aaGGAAAAAAACTTGTCGGGGGCATGGACGCAAAAATTGAGGAGGAGGTGGGGCAAGAGAAATAATGGATTTTCCAAAAAGGG‑TTAATGGTTGGGTG‑CTTTATG‑CTCTCCCCTGTTTTCAGGAAA‑CCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCATGAAAATTATAAGAGAAAAGCCGCCACAAAGTTATTGGCGGTA‑GTCCA‑TAAAGTGATTGAGGAGc < 1:240794/239‑1 (MQ=255) ggAAAGAAACTTGTCGCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGG‑TTAATGGTTGGGCG‑CTATATG‑CTCATCCCTGTTTTCAGGAAA‑CCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTA‑GTCCC‑TAAAATGATTTAGGGGcct > 2:67265/1‑237 (MQ=255) ggAAAGAAACTTGTCGCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGG‑TTAATGGTTGGGCG‑CTATATG‑CTCATCCCTGTTTTCAGGAAA‑CCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTA‑GTACA‑TAAAATGATTTAGGGGCat > 2:752415/1‑239 (MQ=255) cctgggtggtggatgtgACGTCAACATTGGTTATGGAGTGGGCGACGACGAATAATTGATTTTCCAAAAAGGG‑TTAATGGTTGGGAG‑CTATATG‑CTCACCCCTGTTTTCAGGAAA‑CCTACGACGCTTTGGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTA‑GTCCA‑TAAAGTGATTGAGGAGCATATCACGGt < 1:777067/223‑1 (MQ=255) atttttccttGGCATTGAGGTCAAATTTGATGTTGGGTTGGGCGCCAAAAAATAAGGGTTTTTCCACAAAGGG‑TAAAGGGTTGGGCC‑TTATATG‑CTCATCCCTGTTTGCAGAAAA‑CCTACGACGCTTTAGTTGCCAAAGTCGAGACATTAAAGGAAAAAGATCCAGAAAATTATAAGAAAAAAGCCGCCACAAAGTTATTGGCGGTA‑GTCCA‑TAAAGTGATTGAGGAGCATATCACGGt < 1:545023/230‑1 (MQ=255) tGTCGCTGGCAAGGACTAAAACATTGATGTTGAGATTGGCGCCAGCAAATAATGGATTTTCCACAAGGGG‑TTAATGGTTGGGCG‑TTATATG‑CTCCTCCCTGTTTTCAGGAAA‑CCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTA‑GTCCA‑TAAAGTGATTGAGGAGCATATCACGGTCaa < 2:115085/239‑1 (MQ=255) cTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGG‑TTAATGGTTGGGCG‑CTATATG‑CTCATCCCTGTTTTCAGGAAA‑CCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGATAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTA‑TTCCC‑TAAAGTGATTGTGGATCacattccgtgcaaaccct > 2:216325/1‑225 (MQ=255) cAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGG‑TTAATGGTTGGGCG‑CTATATG‑CTCATCCCTGTTTTCAGGAAA‑CCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCCGAGAAAAGCCGCCACAAAGTTATTGGCGGTA‑GGCCA‑TAAAGAGAATTAGGGGCCTAACACGGGCAAACCATCATCACCgccct > 2:1006119/1‑234 (MQ=255) cAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGG‑TTAAGGGTTGGGCG‑CTATATG‑CTCATCCCTGTTTTCAGGAAA‑CCTACGACGCTTTAGTTGCCAAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTA‑GTCCA‑TAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCAt < 2:258093/238‑1 (MQ=255) tgggaTTGGCGACGACGAATAATGGATTTCCCAAAAGGGG‑TTAAGGGTTGGGCG‑CTATATG‑CCCATCCCTGTTTCCAGGAAA‑CCTACGACGTTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGACCCTAAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTA‑GTCCA‑TAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCAT‑GGCa < 2:83978/235‑1 (MQ=255) gagtttggccgcgtggaATAGTGGATTTTCCCCAAGGGG‑TTAATGGTGGGTCG‑TTATATG‑CTCATCCCGGTTTGCAGGAAA‑CCTACGACGCTTTAGTTGCCGAAGGCGAGACATAAAAGGAAAAAGATCCTAAAAATTAACAGAGAAAGGCCGCCACAAAGTTATTGGCGGTA‑GTCCA‑TAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCAT‑GGCaa < 1:573393/223‑1 (MQ=255) gaggtgggcggcGCCAAATAATGGATTGTCCACAAGGGT‑TAAAGGGTGGGGGG‑TTAAAGGACTC‑TCCTGGTTTTCGTGAAT‑CTTCCGACTTTTTATTGGCGTAAGTCGAGACATTAAAGGGAAATGATCCAGAAAATTATCAGGAAAAAGCCGCCACAAAGTTATTGGCGGTA‑GTCCA‑TAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCAT‑GGCaa < 1:752415/232‑1 (MQ=255) tGGCGAAGAAGAATAAGTGATTCTCCAAAAAGTG‑TAAATGTTGGGGGT‑TTATATT‑CTCCTCCAGTTTTTCAGAAAT‑CCTACGCCGGTTGAGGTGCCAAAGCCGAGAATTTAAAGGGAAAAGTTCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTA‑GTCCA‑TAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCAT‑GGCAAGTCGtt < 2:58098/239‑1 (MQ=255) aataatGTATTTACCAAAAAGGG‑TTAAGGGTTGGGCG‑TTATATG‑CCCACCCCTGTTTTCAGAAAC‑CCGACGACGTTTTAGTTGCCGAAGTCGAAACATTAAAGGGAAAAGATCCTAAAAATTACCGGAGAAAAGCCGCCACAAAGTTATTGGCGGTA‑GTCCA‑TAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCAT‑GGCAAGTCGTTAGGCTCTGGGa < 2:449470/239‑1 (MQ=255) aataatGGATTTTCCAAAAAGGG‑TTAATGGTTGGGCG‑TTATATG‑CTCATCCTTGTTTTCAGGAAA‑CCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTA‑GTCCA‑TAAAGTGATTGAGGAGCATATCACGGt < 2:740106/189‑1 (MQ=255) atatgggATTTCCCACAAGGGG‑TTAAGGGTTGGGCG‑CTATATG‑CGCATCCCTGTTTCAAGGAAA‑CCTACGACGTTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTA‑GTCCA‑TAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCAT‑GGCAAGTCGTTAGGCTCTGGGa < 2:962341/233‑1 (MQ=255) ataatGGATTTCCCACAAAGGG‑TTAATGGTTGGGCC‑GTATGGG‑CTGCTCCCTGTTTTCAGGAAA‑CCTACGACGTTTTAGTTGCCGAAGTCAAGAAATAAAAGGGAAAAGACCCTAAAAATGATCAGAAAAAAGCCGCCACAAAGTTATTGGCGGTA‑GTCCA‑TAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCAT‑GGCAAGTCGTTAGGCTCTGGGa < 2:263335/238‑1 (MQ=255) tgtttttTCCCAAAGGGTTTAATGG‑TGGGCGTCATTATG‑CACTCCCCTGTTCTCAGAAAA‑CCTACCACGGTTTAGTGCCCGAAGACGAGACATAAAAGGGAAAAGATCCTAAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTA‑GTCCA‑TAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCAT‑GGCAAGTCGTTAGGCTCTGGGAAAAAt < 1:667045/236‑1 (MQ=255) aaaGGG‑TTAATGGTTGGGCG‑CTATATG‑CTCATCCCTGTTTTCAGGAAA‑CCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTA‑GTCCC‑ATAAGAGATTTAGGAGACAATACCGGGCAATCCATACTCACCCGCATTCCGTGCT‑GGACAGTAGGTAAACTCTGGGAaaaaaaaaaaagtgacc > 1:378232/1‑230 (MQ=255) aaaGGG‑TTAATGGTTGGGCG‑CTATATG‑CTCATCCCTGTTTTCAGGAAA‑CCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGCATGTCCA‑‑AAAAAGATTTAGGGGGAAATCACGGTCAATACATCATTAACGGCATTCCGTCCTGGGCAAGT‑GGTAGGGACTGGGCaaaaaaaaaaacgagga > 1:979477/1‑230 (MQ=255) ttAAGGGTTGGGGG‑CTATATG‑CTAATCCCTGTTTTAAGGAAA‑CCTTCGACGCTTTAGTTGCCGAAGTCGAGAAATTAAAGGAAAAAGATCCTGAAAATTATCAGAAAAAAGCCGCCACAAAGTTATTGGCGGTA‑GTCCA‑TAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCAT‑GGCAAGTCGTTAGGCTCTGGGAAAAATAAAGAC‑TGGTCACGGGTa < 2:516769/239‑1 (MQ=255) tAATGGTTGGGAG‑CTATATG‑CTCATCCCTGTTTTCAGGAAA‑CCTACGACGCTGTATTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTAGCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTA‑GTCCA‑TAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCAT‑GGCAAGTCGTTAGGCTCTGGGAAAAATAAAGAC‑TGGTCACGGGTa < 2:163958/238‑1 (MQ=255) tAAGGGTGGGGCG‑CTAATTG‑CCCATCCCTGTTTCAAGGAAC‑CCTACGACGCTTTAGTTGCCGAAGTCGAGAATTTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTA‑GTCCA‑TAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCAT‑GGCAAGTCGTTAGGCTCTGGGAAAAATAAAGAC‑TGGTCACGGGTa < 2:949228/238‑1 (MQ=255) aaagggTTGGGCG‑CTATAGT‑CTCATCTCTGTTTGCAGGAAA‑CCTACGACGCTTTAGGTGCCGAAGTCGAGACTGAAAAGGGAAAAGATCCTGAAAATTTGCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTA‑GTCCA‑TAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCAT‑GGCAAGTCGTTAGGCTCTGGGAAAAATAAAGAC‑TGGTCACGGGTa < 2:385797/234‑1 (MQ=255) tGGGCG‑CTATATG‑CTCATCCCTGTTTTCAGGAAA‑CCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTG‑GTCCACAAAAGTG‑TTGAGGGGACAATACCGGGACATCCACCCTCCCCCGCATTCCCTAAG‑TGGAAGACGTTAGGCTCTTGGAAAAAAAAAAAC‑AGGACACGGGAaaaaaatgt > 1:167854/1‑234 (MQ=255) tGGGCG‑CTATATG‑CTCATCCCTGTTTTCAGGAAA‑CCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTA‑GTCCA‑TAAAATGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTTCGTCAT‑GGCAAGTCGTTTGGCTCTTGGGAAAATCAAGAC‑TGGTCACGGGGCAAAATTgg > 2:803006/1‑239 (MQ=255) gggtttgatG‑CCCACCCCTGTTTT‑AGGAAACCCTACGACGTTTTAGTTGCCGAAGACGAAAAATTAAAGGAAAAAGATCCTGAAAATTAAAAGAGAAAAGCCGCCACAAAGTTATTGGCGGTA‑GTCCA‑TAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCAT‑GGCAAGTCGTTAGGCTCTGGGAAAAATAAAGAC‑TGGTCACGGGTAAAATTTGGTg < 2:351388/231‑1 (MQ=255) ggcgtttttgtgtcccccgtGTTTTCAGAAAA‑CCTACTACGCTTTAGTGGACGAAGTCGAGAAAATAAAGGGAAAAAACTCTGAAAATTATGAGATAAAAGCCGCCACAAAGTTATTGGCGGTA‑GTCCA‑TAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCAT‑GGCAAGTCGTTAGGCTCTGGGAAAAATAAAGAC‑TGGTCACGGGTAAAATTTGGTg < 1:803006/220‑1 (MQ=255) gccttttttG‑CTCATTCTTTTTTTCAGAAAA‑CCTGCGATGTTTTAGTTGCAGAAAGCGAGACATTAAAGGGAAAAGATCCGGAAAATTATCAGAGAAAGGCCGCCACAAAGTTATTGGCGGTA‑GTCCA‑TAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCAT‑GGCAAGTCGTTAGGCTCTGGGAAAAATAAAGAC‑TGGTCACGGGTAAAATTTGGTg < 1:429919/230‑1 (MQ=255) ccgttataTT‑CTCATCCCTGTTTACAGGAAA‑CCTACGACGTTTTAGTTGCCGAAGTCGGGATATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAGGCCGCCACAAAGTTATTGGCGGTA‑GTCCA‑TAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCAT‑GGCAAGTCGTTAGGCTCTGGGAAAAATAAAGAC‑TGGTCACGGGTAAAATTTGGTg < 2:198836/234‑1 (MQ=255) tatG‑CTCATCCCTGTTTTCAGGAAA‑CCTACGACGTTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTA‑GTCCA‑TAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCAcc < 2:391027/164‑1 (MQ=255) aTCCCTGTTTTCAGGAAA‑CCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTA‑GTCCA‑TAAAGTGATTGAGGGGGCTATCACGGTCAATCCATCATCACCGGCATTCCGTCAT‑TGCAAAGCGTTAGGGCTTGGGGAAAATAAAAAC‑TGGCACCGGGGAAAAATTgtgggtgtccggtttg > 2:260639/1‑222 (MQ=255) tCCCTGTTTTCAGGAAA‑CCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTA‑GTCCA‑TAAAGTGATTGAGGAGCATATCACGGTCAATc < 1:688930/146‑1 (MQ=255) tCCCTGTTTTCAGGAAA‑CCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTA‑GTCCA‑TAAAATGATTGAGGAGCATCTCCCGGTCAATc > 2:688930/1‑146 (MQ=255) tCCCTGTTTTCAGGAAA‑CCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTA‑GTCCA‑TAAAAGGATTGAGGGGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCAT‑GGCAAGTCGTTAGGCTCTGGGAAAAATAAAAAA‑TGGTCACGGGGAAAAATTGGGGCTGGTGGTTATCg > 2:370340/1‑237 (MQ=255) ccTGTTTTCAGGAAA‑CCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTA‑GTCCA‑TAAAGTGATTGAGGGGGCTATCACGGTCAATCCATCATCACCGGCCTTCCGTCAT‑GGCAAGTCGTTAGGGCCTGGGAAAAATAAAAACGGGGCCAGGGACAAAATTTGG‑GCTGGCGGTTTTCGtc > 2:548174/1‑237 (MQ=255) tGTTTTCAGGAAA‑CCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTA‑GTGCA‑TAAAAGGATTTAAGGACATATAACCGCACATACATCATCCACAGCAATCCGTCGT‑GGGAAGGAGGTCGGGTCGGGGGAAAATAAAAAT‑AGGTCACGGGGAAAAattttggcgggtggtatttttacgtt > 1:106103/1‑216 (MQ=255) tGTTTTCAGGAAA‑CCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTA‑GTCCA‑TAAAAGGGTTTTGGAGCATCACCCGGGTAATCCCTCCTCAACGGCATTCCGTCCT‑GGGAAGTCGTTAAGCGTTGGGGGAAATAAAGAC‑AGGACACCGGGAAAATATTGTGTTGTTCggattagtccct > 1:565562/1‑227 (MQ=255) aGGAAA‑CCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTA‑GGCCA‑TAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCAT‑GGCAAGTCGTTAGGGTCTGGGGAAAATAAAAAC‑TTGGCACGGGGAAAAATTTGTGCTTGGCGTTTTCGGTCCTTCTTTCGt > 2:140652/1‑239 (MQ=255) aacctcagtagttttGGTGGCCGAATGGGAGAAATAAAAGGAAAAAGATCCTGAAAATAAACGGAAAAAAGCCGCCACAAAGTTATTGGCGGTA‑GTCCA‑TAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCAT‑GGCAAGTCGTTAGGCTCTGGGAAAAATAAAGAC‑TGGTCACGGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTtata < 1:140652/227‑1 (MQ=255) cgccgCTTGAGTTGCCGAAGTCGAGACATAAAAGGGAAAAGCTCCTAAAAATTACCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTA‑GTCCA‑TAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCAT‑GGCAAGTCGTTAGGCTCTGGGAAAAATAAAGAC‑TGGTCACGGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGaaa < 2:461046/236‑1 (MQ=255) tttAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTA‑GTCCA‑TAAAAGGGTTGTGGAGGATATAACGGTCAATCCATCCTCAACGGCATTCCGTACA‑GGCCGGTCGTTAGGCTCCTGGGAAAATAAAGAC‑TGGTGCCGGGGAAAATTTTGTGCGGGGTGGTATGGTCTCTTCTTTCTTTAAAAAGaaaaaaaaa > 1:11759/1‑235 (MQ=255) tttAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTA‑GGCAA‑TAAAATGATTTTGGGGGAAATAACGGTCAATCCACCATCACCGGCATTCCGTCAT‑GGCAAGTACTTAGGCTCCGGGGAAAAAAAAAAA‑TGGTCACGGGGCAAAATTGTGGCTGGTCGTTTTATGCTCTTTTTTTGTTTTAAGGaaaaaaaaa > 1:696866/1‑235 (MQ=255) taataagagacagaCATAAAAGGAAAAGGATCAAAAAAATTAACAAAAAAAAGCCGACACAAAGTTATTGGCGGTA‑GTCCA‑TAAAGTGATTGAGGAGCATAGCACGGTCAATCCATCATCACCGGCATTCCGTCAT‑GGCAAGTCGTTAGGCTCTGGGAAAAATAAAGAC‑TGGTCACGGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGtca < 1:170519/228‑1 (MQ=255) tGCCGAAGTAGAGAAATTAAAGGGAAAAGATCCTAAAAATTATCAGAAAAAAGCCGCCACAAAGTTATTGGCGGTA‑GTCCA‑TAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCAT‑GGCAAGTCGTTAGGCTCTGGGAAAAATAAAGAC‑TGGTCACGGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGtca < 2:754814/239‑1 (MQ=255) cccGAAGGCGAGAAATTAAAGGGAAAAGTCCCGAAAAATTATGAGAGAAAAGCCGCCACAAAGTTATTGGCGGTA‑GTCCA‑TAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCAT‑GGCAAGTCGTTAGGCTCTGGGAAAAATAAAGAC‑TGGTCACGGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGtcat < 2:979477/238‑1 (MQ=255) ctaCAATAAGGGAAAAAGAGCTTGAAAATTAACAGAGAAAAGCCGGCCCAAAGTTATTGGCGGTA‑GCCCA‑AAAAGTTATTTAGGAACATATCACGGTCAAGCCATCATCACCGGCAGTCCGTCAT‑GGCAAGTCGTTAGGCTCTGGGAAAAATAAAGAC‑TGGTCACGGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGgga < 1:491648/237‑1 (MQ=255) aaCATTAAAGGGAAAAGATCCTAAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTA‑GTCCA‑TAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCAT‑GGCAAGTCGTTAGGCTCTGGGAAAAATAAAGAC‑TGGTCACGGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGgga < 2:11759/237‑1 (MQ=255) aGGGAAAAGATCCCTAAAATTAACAGAGAAAAGCCGCCACAAAGTTATTGGCGGTA‑GTCCA‑TAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCAT‑GGCAAGTCGTTAGGCTCTGGGAAAAATAAAGAC‑TGGTCACGGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAAc < 2:106103/239‑1 (MQ=255) aaaaGATCCTAAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTA‑GTCCA‑TAAAGAGATTGAGGAGCATATCACGGTCAATCCATCATCCCCCGCATTCCGGCCT‑GGCAAGTCGTTAGGCTCTGGGGAAAATAAAGAC‑TTGTCACCGGGAAAATTTGGTGCTGGTCGTTATCGCCTCTTCTTTCGTTTTAAGGAAAAAAAGAAAGtcatccatttggg > 2:170519/1‑217 (MQ=255) tCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTA‑GTCCA‑TAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCAT‑GGCAAGTCGTTAGGCTCTGGGAAAAATAAAGAC‑TGGTCACGGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGAAAaca < 2:696866/239‑1 (MQ=255) atttATAAGAAAAAAGCCGCCACAAAGTTATTGGCGGTA‑GTCCA‑TAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCAT‑GGCAAGTCGTTAGGCTCTGGGAAAAATAAAGAC‑TGGTCACGGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGAAAACACTCTgcg < 2:249122/237‑1 (MQ=255) aggaaaaaGCCGGCCAAAAGTTATTGGCGGTA‑GTCCA‑TAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCAT‑GGCAAGTCGTTAGGCTCTGGGAAAAATAAAGAC‑TGGTCACGGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGAAAACACTCTGCGCACCTAc < 2:576971/235‑1 (MQ=255) aaagaAAAGCCGCCACAAAGTTATTGGCGGTA‑GTCCA‑TAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGGCAT‑GGCAAGTCGTTAGGCTCTGGGAAAAATAAAGAC‑TGGTCACGGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGAAAACACTCTGCGCACCTAc < 2:382170/237‑1 (MQ=255) gccgccACAAAGTTATTGGCGGTA‑ATCCA‑TAAAAAGATTGAAGAGGATATCACGGTCAAACCATCATCCACGGCATTCCGGCAT‑AGGAAGACGGTAAGGTCTGGGGAAAAAAAAAAC‑TGGGTACCGGGAAAAATTTGTGCTGGTCGTTATCGTCTCTTCTTTCTGTTTAGTGAAAAAAAAAAAATGAACATTTTTGGATGGGTGAACGATGAAAaaacaacacgacacaacggtaaaaa > 1:135203/1‑218 (MQ=255) ccACAAATTTTTTGGCGGGT‑GTCCA‑GAAATGGATTTAGGGGAATATCACGGACAATTCAGCATCACAGAGATTCCGTCAT‑GGCAAGTCGTTAGGGTGCGGGAAAAATAAAGAC‑TGGTCACGGGTAAAAGTTGGTGCTGGTCGTTATCGTCTCTGCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGAAAACACTCTGCGCACCTACGGTAAAAAAACa < 1:985956/239‑1 (MQ=255) ccACAAAGTTATTGGCGGTA‑GTCCA‑TAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCAT‑GGCAAGTCGTTAGGCTCTGGGAAAAATAAAGAC‑TGGTCACGGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGAAAACACTCTGCGCACCTACGGTAAAAAAACa < 2:135203/239‑1 (MQ=255) cacaAAGTTATTGGCGGTA‑GTCCA‑TAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCAT‑GGCAAGTCGTTAGGCTCTGGGAAAAATAAAGAC‑TGGTCACGGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGAAAACACTCTGCGCACCTACGGTAAAAAAACa < 2:565562/238‑1 (MQ=255) cccaaGTTTTTTGCGGTA‑GTCCA‑TAAATTGATTGGGGTGCATATACCGGGCAATCCATCATAGCCGGCATTCCGTCAT‑GGCAAGTCGTTAGGCTCTGGGAAAAATAAAGAC‑TGGTCACGGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGAAAACACTCTGCGCACCTACGGTAAAAAAACAGa < 1:370340/236‑1 (MQ=255) acaATGTTATTGGCGTTA‑GTCCA‑TAAAGTGAGTGAGGCGCATAGAAAGGTCAATCCATCATCACCGGCATTCCGTCAT‑GGCAAGTCGTTAGGCTCTGGGAAAAATAAAGAC‑TGGTCACGGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTGTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGAAAACACTCTGCGCACCTACGGTAAAAAAACAGa < 2:391563/239‑1 (MQ=255) acaAAGTTATTGGCGGTA‑GTCCA‑TAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCAT‑GGCAAGTCGTTAGGCTCTGGGAAAAATAAAGAC‑TGGTCACGGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGAAAACACTCTGCGCACCTACGGTAAAAAAACAGa < 2:47166/239‑1 (MQ=255) acaAAGTTATTGGCGGTA‑ATCCA‑TAAAGTTATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCAT‑GGCAAGTCGTTAGGCTCTGGGAAAAATAAAGAC‑TGGTCACGGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGAAAACACTCTGCGCACCTACGGTAAAAAAACAGa < 2:14429/239‑1 (MQ=255) tttATTCGCGGTC‑GGCCA‑TAAAGATATTGTGGGGTATCTCACGTTCATTCCATCATCACCGGCATTCCGTAAT‑GGCAAGTCGTTAGGCTCTGGGAAAAATAAAGAC‑TGGTCACGGGTAAAATTTTGTGCTGGTCGTTATCGTCTCTTCTGTCGTTATAGTGAAAAAGACAAAGTCATCATTCTGGGATGGATGAACGATGAAAACACGCTGCGCACCTACGGTAAAAAAACAGATGCCt < 1:469019/238‑1 (MQ=255) ccA‑TAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCAT‑GGCAAGTCGTTAAGCTCTGGGAAAAATAAAGAC‑TGGTCACGGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGAAAACACTCTGCGCACCTACGGTAAAAAAACAGATGCCTATACCGTATTCAGCa < 2:378232/239‑1 (MQ=255) tGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCAT‑GGCAAGTCGTTAGGCTCTGGGACAAATAAAGAC‑TGATCACGGGTAAAATTTGGTGCTGGGCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTTTGGGATGGCTGAACGTAGCAAAAACTCAGCGAACCTACGGATAAAAACAACATCCCAATACAGTAttaccaaaacagtaa > 1:107123/1‑226 (MQ=255) ttGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCAT‑GGCAAGTCGTTAGGCTCTGGGAAAAATAAAGAC‑TGGTCACGGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGAAAAAACTCTGCGCACCTACGGTAAAAAAACAGATGCCTATACCGAATTCCTCAAAATTTTaaaa > 2:527402/1‑239 (MQ=255) tGAGGAGCATATCACGGTCAAACCATCATCACCGGCATTCCGTCAT‑GGCAAGTCGTTAGGCTCTGGGAAAAATAAAGAC‑TGGTCACGGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGAAAACACTCTGCGCACCTACGGTAAAAAAACAGATGCCTATACCGTATTCAGCAAAATGTTaaaaa < 2:878619/239‑1 (MQ=255) gaggagCAAATCACGGGCAATCCATCCTCCCCGGCATTCCGTCAT‑GGCAAGGCGTTAGGCTCTGGGAAAAATAAAGGC‑TGGTCACGGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGAAAACACTCTGCGCACCTACGGTAAAAAAACAGATGCCTATACCGTATTCAGCAAAATGTTAAAAag < 2:177277/239‑1 (MQ=255) | ACAAGGAAAGAAACTTGTCGCTGGCATGGACGTCAACATTGATGATGAGATTGGCGACGACGAATAATGGATTTTCCACAAAGGG‑TTAATGGTTGGGCG‑CTATATG‑CTCATCCCTGTTTTCAGGAAA‑CCTACGACGCTTTAGTTGCCGAAGTCGAGACATTAAAGGGAAAAGATCCTGAAAATTATCAGAGAAAAGCCGCCACAAAGTTATTGGCGGTA‑GTCCA‑TAAAGTGATTGAGGAGCATATCACGGTCAATCCATCATCACCGGCATTCCGTCAT‑GGCAAGTCGTTAGGCTCTGGGAAAAATAAAGAC‑TGGTCACGGGTAAAATTTGGTGCTGGTCGTTATCGTCTCTTCTTTCGTTATAGTGAAAAAGAGAAAGTCATCATTCTGGGATGGATGAACGATGAAAACACTCTGCGCACCTACGGTAAAAAAACAGATGCCTATACCGTATTCAGCAAAATGTTAAAAAG > NC_000913/3277269‑3277741 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |