| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,355,596 | G→C | 6.8% | A292P (GCA→CCA) | gltB → | glutamate synthase, large subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,355,596 | 0 | G | C | 6.8% | 220.5 / 8.6 | 82 | A292P (GCA→CCA) | gltB | glutamate synthase, large subunit |
| Reads supporting (aligned to +/- strand): ref base G (47/27); new base C (4/2); total (53/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.44e-01 | |||||||||||
GCTTCTCCACTAACACCGTACCGCGCTGGCCGCTGGCGCAACCGTTCCGCTATCTGGCGCATAACGGTGAAATCAACACCATCACCGG‑TAA‑CCGCCAATGGGCGCGTGCGCGTACTTAT‑AAATTCCAGACACCGCTTATCCCTGACCTGCACGACGCCGCACCGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGCAGAACAACCCGGATATGGACCCGGAACTGCGTGCCTTCTTTGACTTTAACTCCATGCATATGGAGCCGTGGGATGGCC‑CGGCGGGCATCGTGATGTCCGACGGTCGTTTTGCCGCCTGTAACCTCGACCGTAACGGTCTGCGTCCGGCGCGCTACGTCAT‑CACCAAAGATAAGCTCA > NC_000913/3355372‑3355827 | gcTTCTCCACTAACACCGTACCGCGCTGGCCGCTGGCGCAACCGTTCCGCTATCTGGCGCATAACGGTGAAATCAACACCATCACCGG‑TAA‑CCGCCAATGGGCGCGTGCGCGTACTTAT‑AAATTCCAGACACCGCTTATCCCTGACCTGCACGACGCCGCCCCGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATCCTGGAACTGCTGCTGACAGCCGggatggaa > 2:216607/1‑238 (MQ=255) cTAACACCGTACCGCGCTGGCCGCTGGCGCAACCGTTCCGCTATCTGGCGCATAACGGTGAAATCAACACCATCACCGG‑TAA‑CCGCCAATGGGCGCGTGCGCGTACTTAT‑AAATTCCAGACACCGCTTATCCCTGACCTGCACGACGCCGCACCGTTCGTCAACGAAACCGGCCCTTACTCCAGTTCGATGGATAAAATGCTGGAACCGCTGCTGGCAGGCggggggggaaaaaccagg > 1:866024/1‑224 (MQ=255) acacCGTACCGCGCTGGCCGCTGGCGCAACCGTTCCGCTATCTGGCGCATAACGGTGAAATCAACACCATCACCGG‑TAA‑CCGCCAATGGGCGCGTGCGCGTACTTAT‑AAATTCCAGACACCGCTTATCCCTGACCTGCACGACGCCGCACCGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACCGCTGCTGGCAGTCGGGATGGATATAATCCGCGcc > 2:581887/1‑239 (MQ=255) acCGTACCGCGCTGGCCGCTGGCGCAACCGTTCCGCTATCTGGCGCATAACGGTGAAATCAACACCATCACCGG‑TAA‑CCGCCAATGGGCGCGTGCGCGTACTTAT‑AAATTCCAGACACCGCTTATCCCTGACCTGCACGACGCCGCACCGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCACGCGGGGTGGATATAAACCGCGCCaa > 1:17951/1‑238 (MQ=255) gTACCGCGCTGGCCGCTGGCGCAACCGTTCCGCTATCTGGCGCATAACGGTGAAATCAACACCATCACCGG‑TAA‑CCGCCAATGGGCGCGTGCGCGTACTTAT‑AAATTCCAGACACCGCTTATCCCTGACCTGCACGACTCCGCACCGTTCGCCAACGAAACCGCCCCTGACTCCAGTTCGCAGGAAAACCTCAGGGAACTGCTCGTGGAGAGCgggagggaaaagagcccgtcaaaggg > 1:317695/1‑221 (MQ=255) gTACCGCGCTGGCCGCTGGCGCAACCGTTCCGCTATCTGGCGCATAACGGTGAAATCAACACCATCACCGG‑TAA‑CCGCCAATGGGCGCGTGCGCGTACTTAT‑AAATTCCAGACACCGCTTATCCCTGACCTGCACGACGCCGCACCGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGCTAACATGCTGGAACTGCTGCTGGCAGGCGGGATGGATATCATCCGCGCCATGc > 2:853349/1‑238 (MQ=255) gTACCGCGCTGGCCGCTGGCGCAACCGTTCCGCTATCTGGCGCATAACGGTGAAATCAACACCATCACCGG‑TAA‑CCGCCAATGGGCGCGTGCGCGTACTTAT‑AAATTCCAGACACCGCTTATCCCTGACCTGCACGACGCCGCACCGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGCTAACATGCTGGAACTCCTGCTGGCAGACGGGATGAATTCCCTCCTCGCCCTga > 2:152221/1‑237 (MQ=255) gTACCGCGCTGGCCGCTGGCGCAACCGTTCCGCTATCTGGCGCATAACGGTGAAATCAACACCATCACCGG‑TAA‑CCGCCAATGGGCGCGTGCGCGTACTTAT‑AAATTCCAGACACCGCTTATCCCTGACCTGCACGACGCCGCACCGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGggatggat > 2:545342/1‑222 (MQ=255) gTACCGCGCTGGCCGCTGGCGCAACCGTTCCGCTATCTGGCGCATAACGGTGAAATCAACACCATCACCGG‑TAA‑CCGCCAATGGGCGCGTGCGCGTACTTAT‑AAATTCCAGACACCGCTTATCCCTGACCTGCACGACGCCGCACCGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATACTGGAACTGCTGCTGCCAGCGGGGAGGGATAACAACACCCCCATGc > 1:223955/1‑238 (MQ=255) gTACCGCGCTGGCCGCTGGCGCAACCGTTCCGCTATCTGGCGCATAACGGTGAAATCAACACCATCACCGG‑TAA‑CCGCCAATGGGCGCGTGCGCGTACTTAT‑AAATTCCAGACACCGCTTATCCCTGACCTGCACGACGCCGCACCGTTCGTCAACGAAACCGGCCCTGACCCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGGgggagggaaaacaacccccccaagg > 1:712377/1‑221 (MQ=255) tACCGCGCTGGCCGCTGGCGCAACCGTTCCGCTATCTGGCGCATAACGGTGAAATCAACACCATCACCGG‑TAA‑CCGCCAATGGGCGCGTGCGCGTACTTAT‑AAATTCCAGACACCGCTTATCCCTGACCTGCACGACGCCGCACCGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGCACTGCTGCTGCCAGGCGGGATGGGAATCATCTGGGCAATGc > 2:704625/1‑237 (MQ=255) tACCGCGCTGGCCGCTGGCGCAACCGTTCCGCTATCTGGCGCATAACGGTGAAATCAACACCATCACCGG‑TAA‑CCGCCAATGGGCGCGTGCGCGTACTTAT‑AAATTCCAGACACCGCTTATCCCTGACCTGCACGACGCCGCACCGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGAGGGATatcat > 2:310483/1‑226 (MQ=255) ctggccgctggcGCAACCGTTCCGCTATCTGGCGCATAACGGTGAAATCAACACCATCACCGG‑TAA‑CCGCCAATGGGCGCGTGCGCGTACTTAT‑AAATTCCAGACACCGCTTATCCCTGACCTGCACGACGCCGCACCGTTCGTCAACGAAACCGGCCCCAACCCCAGTTCGCTGGATAACATGCTGGACCTGCTGCTCGCAGGCGGGATGGATATCACCCGCCCCGTGGGGCTATTaa > 1:162705/1‑238 (MQ=255) tggccgctggcGCAACCGTTCCGCTATCTGGCGCATAACGGTGAAATCAACACCATCACCGG‑TAA‑CCGCCAATGGGCGCGTGCGCGTACTTAT‑AAATTCCAGACACCGCTTATCCCTGACCTGCACGACGCCGCACCGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACGGCTGCTGGCAGGCGGGATGGCGTGCATCCGCGCCATGCGCCTAtaggt > 2:62830/1‑235 (MQ=255) gccgctggcGCAACCGTTCCGCTATCTGGCGCATAACGGTGAAATCAACACCATCACCGG‑TAA‑CCGCCAATGGGCGCGTGCGCGTACTTAT‑AAATTCCAGACACCGCTTATCCCTGACCTGCACGACGCCGCACCGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGTTAACATGCTGGAACTGCTTCTGGCAGGCGGGATGGATAGCATCCGCGCCATGCGTCTATTAGTa > 2:804402/1‑238 (MQ=255) gccgctggcGCAACCGTTCCGCTATCTGGCGCATAACGGTGAAATCAACACCATCACCGG‑TAA‑CCGCCAATGGGCGCGTGCGCGTACTTAT‑AAATTCCAGACACCGCTTATCCCTGACCTGCACGACGCCGCACCGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGCTAACATGCTGGAACTGCGGATGGCACGCGGGATTGATATCATCCGCCCCCTGCGTCTATTAGTa > 2:993474/1‑238 (MQ=255) tggcGCAACCGTTCCGCTATCTGGCGCATAACGGTGAAATCAACACCATCACCGG‑TAA‑CCGCCAATGGGCGCGTGCGCGTACTTAT‑AAATTCCAGACACCGCTTATCCCTGACCTGCACGACGCCGCACCGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGTCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTaccacc > 2:894241/1‑238 (MQ=255) tCCGCTATCTGGCGCATAACGGTGAAATCAACACCATCACCGG‑TAA‑CCGCCAATGGGCGCGTGCGCGTACTTAT‑AAATTCCAGACACCGCTTATCCCTGACCTGCACGACGCCGCACCGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGCTGGATACCATGCTGCAACTGCTGCTGGCCGGCGGGTTGGCTACCACCCGAGCCCTTCGGCTATTAATGCCACCCGccgtggcgaaa > 1:963870/1‑230 (MQ=255) ccGCTATCTGGCGCATAACGGTGAAATCAACACCATCACCGG‑TAA‑CCGCCAATGGGCGCGTGCGCGTACTTAT‑AAATTCCAGACACCGCTTATCCCTGACCTGCACGACGCCGCACCGTTCGTCAACGCAACCGGCTCTGACTCCAGTTCGATGGATAACAAGCTGGAACTGCTGCTGTCAGGGGGGATGGATATCTTCCGCGCCACGAGCCCAATAGAAACACCCGCACGGCAGaaca > 1:284505/1‑239 (MQ=255) ttATCCGGGGCAAAACGTGTAAAACAACCCCACCCCCGG‑GAACCCGCCAATGGGCGCGTGCGCGTACTTAT‑AAATTCCAGACACCGCTTATCCCTGACCTGCACGACGCCGCACCGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGCCAgcagcag < 2:712377/238‑7 (MQ=255) tattggccgccatagtgcaaaaTCACCCCCACCCCCGGTTAC‑CCGCCAATGGGCGCGGGCGCGTACTTAT‑AAATTCCAGACCCCGCTTATCCCTGACCGGCCCGACGCCGCACCGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGCAGAACAAcc < 1:806194/220‑1 (MQ=255) tCTGGCGCATAACGGTGAAATCAACACCATCACCGG‑TAA‑CCGCCAATGGGCGCGTGCGCGTACTTAT‑AAATTCCAGACACCGCTTATCCCTGACCTGCACGACGCCGCACCGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGATGGCTATCATCCGCGCCATCCGCCTATTAGTACCACCCCCCTGGCAGAACAACCCgg > 2:272893/1‑239 (MQ=255) aTAACGGTGAAATCAACACCATCACCGG‑TAA‑CCGCCAATGGGCGCGTGCGCGTACTTAT‑AAATTCCAGACACCGCTTATCCCTGACCTGCACGACGCCGCACCGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGATGGGTATAAACCCCGCCATGCGTCTTTTAGTAACACCCCCCGGGCAGAAAAACCCGGATATGGa > 1:446917/1‑238 (MQ=255) aaCGGTGAAATCAACACCATCACCGG‑TAA‑CCGCCAATGGGCGCGTGCGCGTACTTAT‑AAATTCCAGACACCGCTTATCCCTGACCTGCACGACGCCGCACCGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGTTTGAAATCATCCGCGCCATGGGGCTTTTATTACAACCCCCCGGGCAGAACAACCCGGAAATGGAccc > 1:622332/1‑239 (MQ=255) aaCGGTGAAATCAACACCATCACCGG‑TAA‑CCGCCAATGGGCGCGTGCGCGTACTTAT‑AAATTCCAGACACCGCTTATCCCTGACCTGCACGACGCCGCACCGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGCAGAACAACCCGGATATGGAccc > 2:83811/1‑239 (MQ=255) aaCGGTGAAATCAACACCATCACCGG‑TAA‑CCGCCAATGGGCGCGTGCGCGTACTTAT‑AAATTCCAGACACCGCTTATCCCTGACCTGCACGACGCCGCACCGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCGGGCCGAACAACCCgg > 2:293655/1‑229 (MQ=255) tgagtaagggacaggccggaaagccGCCAATGGGCGCGTGCGCGTACTTAT‑AAATTCCAGACACCGCTTATCCCTGACCTGCACGACGCCGCACCGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGCAGAACAACCCGGATATGGACCCGGAAc < 2:356762/215‑1 (MQ=255) ccccacccccacttcaa‑CCGCCAATGGGGGCG‑GCCGGTGATTATAAAATTCCGGACCCCGCTTGTCCCTGGCCCGGACGAGGCGCGACGTTTCGCAAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGCAGAACAACCCGGATATGGACCCGGAACTGCGTGc < 1:806356/224‑1 (MQ=255) acCATCACCGG‑TAA‑CCGCCAATGGGCGCGTGCGCGTACTTAT‑AAATTCCAGACACCGCTTATCCCTGACCTGCACGACGCCGCACCGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGATGGATATCATCCCCGCCATGCGTCTATTAGTACCACCCGCCTGGCAGAACAACCCGGATATGGACCCGGAACTGCGTGCctt > 2:267118/1‑239 (MQ=255) tCACCGG‑TAA‑CCGCCAATGGGCGCGTGCGCGTACTTAT‑AAATTCCAGACACCGCTTATCCCTGACCTGCACGACGCCGCACCGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGCAGAACAACCCGGATATGGACCCGGAACTGCGTGCCTTCttt > 2:600690/1‑239 (MQ=255) tCACCGG‑TAA‑CCGCCAATGGGCGCGTGCGCGTACTTAT‑AAATTCCAGACACCGCTTATCCCTGACCTGCACGACGCCGCACCGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCCCCTGGCAGAAAAACCCGGCTATGGCCCCGGAAATGCGGGCCTTCttt > 1:958463/1‑239 (MQ=255) cctcgcgtttcactgCCAATGGGCGTGTGCGCGTATTTAT‑AAATTCCAGACACCGCTTATCCCGGACCTGCACGAGGCCGCTCCGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGCAGAACAACCCGGATATGGACCCGGAACTGCGTGCcttct < 1:316767/225‑1 (MQ=255) cccccgggca‑CCCCCAATGGGCGCGTGGGCTTACTTAT‑AAATTCCAGACCCCGCTTATCCCTGACCTGCACGACGCCGCACCGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGCAGAACAACCCGGATATGGACCCGGAACTGCGTGCCTTCttt < 1:894241/230‑1 (MQ=255) gcgcccGCCAAGGGGCGAGTTCGCTGACTTAA‑AACTCCCAAACCCCGCGTAGCCCTGACCTGCACGACGGCGCACCGTTCCGGAGCGAAACCGGGTCGGGCTCCAGTTCGGTGGAGAAAATGCTGGAAGTGCTGCTGGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGCAGAACAACCCGGATAGGGGCCCGGAACTGCGTGCCTTCTTTGGCttt < 1:744066/235‑1 (MQ=255) aacccGCCAATGGGCGCCTGCGCGTACTTAT‑AAATTCCAGACACCGCTTATCCCTGACCTGCACGACGCCGCACCGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGCAGAACAACCCGGATATGGACCCGGAACTGCGTGCCTTCTTTGACttt < 2:709335/235‑1 (MQ=255) caatggggCGC‑TGCGCGTACTTAT‑AAATTCCAGCCACCGCTTATCCCTGACCTGCACGACGCCGCACCGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGCAGAACAACCCGGATATGGACCCGGAACTGCGTGCCTTCTTTGACTTTAACTCCAt < 2:962657/234‑1 (MQ=255) cAATGGGCGCGTGCGCGTACTTAT‑AAATTCCAGACACCGCTTATCCCTGACCTGCACGACGCCGCACCGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGCAGAACAACCCGGATATGGACCCGGAACTGCGTGCCTTCTTTGACTTTAACTCCAt < 2:17951/239‑1 (MQ=255) cgcgtgcgcgtACTTAT‑AAATTCCAGACACCGCTTATCCCTGACCTGCACGACGCCGCACCGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGATGGATATCATCCGCGCCATTCGTCTATTAGTACCACCCGCCTGGCAGAACAACCCGGATATGGACCCGGAACTGCGGGCCTTATTTGACTTTAACTCCATGCCTATg > 2:715882/1‑239 (MQ=255) gcgtgcgcgtACTTAT‑AAATTCCAGACCCCGCTTATCCCTGACCTGCACGACGCCGCACCGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGCAGAACAACCCGGATATGGACCCGGAACTGCGTGCCTTCTTTGACTTTAACTCCATGCATATg < 2:540277/238‑1 (MQ=255) cgcgtACTTAT‑AAATTCCAGACACCGCTTATCCCTGACCTGCACGACGCCGCACCGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGCAGaac < 2:874469/176‑1 (MQ=255) cgcgtACTTAT‑AAATTCCAGACACCGCTTATCCCTGACCTGCACGACGCCGCACCGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGCAGaaa > 1:874469/1‑175 (MQ=255) cgtACTTAT‑AAATTCCAGACACCGCTTATCCCTGACCTGCACGACGCCGCACCGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGCAGAACAACCCGGATATGGACCCGGAAATGCGTGCCTTCTTTGACTTTAACTCCATGCCTATGGGGCCGTg > 2:305909/1‑239 (MQ=255) ttAT‑AAATTCCAGGCACCGCTTATCCCTGACCTGCACGACGCCGCACCGTTCGTCAACGAAACCGGCTCTTACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGCAGAACAACCCGGATATGGACCCGGAACTGCGTGCCTTCTTTGACTTTaa < 2:345770/213‑1 (MQ=255) at‑aAATTCCAGACACCGCTTATCCCTGACCTGCACGACGCCGCACCGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCCGGCAGAACAACCCGGATATGGACCCGGAAATGCGTGCCTTCTTTGGCTTTAACTCCCTCCATTTGGAGCCGgggggaggc > 1:945634/1‑234 (MQ=255) ttCCAGACACCGCTTATCCCTGACCTGCACGACGCCGCACCGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGCAGAACAACCCGGATATGGACCCGGAACTGCGTGCCTTCTTTGACTTTAACTCCATGCATATGGAGCCGTGGGATGGCC‑cggc < 2:284505/239‑1 (MQ=255) cAGACACCGCTTATCCCTGACCTGCACGACGCCGCACCGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGCAGAACAACCCGGATATGGACCCGGAACTGCGTGCCTTCTTTGACTTTAACTCCATGCCAATGGAGCCGTGGGATGGCC‑cggcgg > 2:1006961/1‑238 (MQ=255) cAGACACCGCTTATCCCTGACCTGCACGACGCCGCACCGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGCAGAACAAACCGGATACGGAACCGGACCATCCGGCCCTCCTTGAACTTACATCCAGACAAATGGAAACGGGGGATTGCC‑Cgggggg > 1:919673/1‑239 (MQ=255) gACACCGCTTATCCCTGACCTGCACGACGCCGCACCGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGCAGAACAACCCGGATATGGACCCGGAACTGCGTGCCTTCTTTGACTTTAACTCCATGCATATGGAGCCGTGGGATGGCC‑CGGCGGGCa < 2:945634/239‑1 (MQ=255) cGCTTATCCCTGACCTGCACGACGCCGCACCGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGCAGAACAACCCGGATATGGACCCGGAACTGCGTGCCTTCTTTGACTTTAACTCCATGCATATTGAGCCGTGGGATGGCC‑CGGCGGGGCTCGTg > 2:520096/1‑239 (MQ=255) tCCCTGGCCTGCACGACCCCCCACCTTTCGTCCACTAACCCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGGTGGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGCAGAACAACCCGGATATGGACCCGGAACTGCGTGCCTTCTTTGACTTTAACTCCATGCATATGGAGCCGTGGGATGGCC‑CGGCGGGCATCGTGATGTcc < 1:520096/239‑1 (MQ=255) aCCTGCACGACGCCGCACCGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGCAGAACAACCCGGATATGGACCCGGAACTGCGTGCCTTCTTTGACTTTAACTCCATGCATATGGAGCCGTGGGATGGCC‑CGGCGGGCATCGTGATGTCCGCCGGt > 2:763236/1‑239 (MQ=255) aCCTGCACGACGCCGCACCGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGCAGAACAACCCGGATATGGACCCGGAACTGCGGGCCTTCTTTTCCTTTAACTCCATGCATATGGAGCCGTGGGATGGCC‑CGGCgggaaaccggagtgccggcggg > 1:289780/1‑220 (MQ=255) aCCTGCACGACGCCGCACCGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCCCCTGGCAGAACAACCCGGATATGGACCCGGAAATTCGTGCCTTCTTTGCCTTTAACTCCCGTCATTTGGAGCCCGGGGGTGCCC‑CGGGGGGCGTCgggtagccccggggg > 1:857852/1‑225 (MQ=255) cACGACGCCGCCCCGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGCAGAACAACCCGGATATGGACCCGGAACTGCGTGc < 1:981899/164‑1 (MQ=255) cACGACGCCGCACCGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGCAGAACAACCCGGATATGGACCCGGAACTGCGTGc > 2:981899/1‑164 (MQ=255) acgCCGCACCGTTCGGCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGCAGAACAACCCGGATATGGACCCGGAACTGCGTGCCTTCTTTGACTTTAACTCCATGCATATGGAGCCGTGGGATGGCC‑CGGCGGGCATCGTGATGTCCGACGGTCGTTTTgcc < 2:137241/239‑1 (MQ=255) cgcACCGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGCTGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGATGGGTATCATCCGCGCCATGCGTCTCTTAGTCCCACCCGCCTGGCAGAACAACCCGGATATGGACCCGGAACTGCGTGCCTCCTTTTACTTTTAACCCGTGCAAAGGGAGCCGTGGGTGGGCC‑CGGGGGGCCTCCTGAGGTCCGCCGAGCGTTTTgcccccc > 1:444876/1‑238 (MQ=255) cgcACCGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGATGGATATCATCCGCGCCATGCg < 2:314759/99‑1 (MQ=255) cgcACCGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGATGGATATCATCCGCGCCATGCg > 1:314759/1‑99 (MQ=255) cACCGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGCAGAACAACCCGGATATGGACCCGGAACTGCGTGCCTTCTTTGACTTTAACTCCATGCATATGGAGCCGTGGGATGGCC‑CGGCGGGCATCGGGATGTCCGCCGGGCGTTTTGCCGCCTgg > 2:247278/1‑238 (MQ=255) ttCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGCGGAACAACCCGGCAATGGACCCGGAACTGCGTGCCTTCTTTGACTTTAACTCCATGCAATTGGAGCCCTGGGATGGCCACGGTGGG‑ATCGTGATGTCCCACGGTGGTTTTTCCCCCTGTaaac > 1:347465/1‑236 (MQ=255) ttCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGCAGAACAACCCGGATATGGACCCGGAACTGCGTGCCTTCTTTGACTTTAACTCCATGCATATGGAGCCGTGGGATGGCC‑CGGCGGGCATCGGGATGTCCGACGGTCGTTTTGCCGCCTGTAAcc > 2:356871/1‑238 (MQ=255) tCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGCAGAACAACCCGGATATGGACCCGGAACTGCGTGCCTTCTTTGACTTTAACTCCATGCATATGGAGCCGTGGGATGGCC‑CGGCGGGCATCGTGATGTCCGACGGTCGTTTTGCCGCCTGTAACCTc < 2:958463/239‑1 (MQ=255) tCGTCAACGAAACCGGCTCTGACCCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGCAGAACAACCCGGATATGGACCCGGAACTGCGTGCCTTCTTTGACTTTAACTCCATGCATATGGAGCCGTGGGATGGCC‑CGGCGGGCATCGTGATGTCCGACGGTCGTTTTGCCGCCTGTAACCTc < 2:866024/239‑1 (MQ=255) gTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGCAGAACAACCCGGATATGGACCCGGAACTGCGTGCCTTCTTTGACTTTAACTCCATGCATATGGAGCCGTGGGATGGCC‑CGGCGGGCATCGGGATGGCCGACGGTCGTTTTTCCGCCTGGAAACTCg > 2:37031/1‑238 (MQ=255) gaaCCGGCTCGTGCCCCAGGTCGAGGGAAAACCTGCTGGAAATGCGGCGGGCGGGCGGGGTGGATATCACCCGCGCCAGGCGTCTATTAGGCCCCCCCGCCTGGCAGAACAACCCGGATATGGACCCGGAACTGCGTGCCTTCTTTGACTTTAACTCCATGCATATGGAGCCGTGGGATGGCC‑CGGCGGGCATCGTGATGTCCGACGGTCGTTTTGCCGCCTGTAACCTCGACCGTAAc < 1:658956/238‑1 (MQ=255) aGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGCAGAACAACCCGGATATGGACCCGGAACTGCGTGCCTTCTTTGACTTTAACTCCATGCATATGGAGCCGTGGGATGGCC‑CGGCGGGCATCGTGATGTCCGACGGTCGTTTTTCCGCCTGTAACCTGCACCGTAACGGTCTGCGGCCGgcgc > 2:48527/1‑238 (MQ=255) cgggcccatatgcgggttgttctgCCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAATACCACCCGCCTGGCAGAACAACCCGGATATGGACCCGGAACTGCGTGCCTTCTTTGACTTTAACTCCATGCATATGGAGCCGTGGGATGGCC‑CGGCGGGCATCGTGATGTCCGACGGTCGTTTTGCCGCCTGTAACCTCGACCGTAACGGTCTGCGTCCGGCGCGCTACGtcat < 2:279110/218‑1 (MQ=255) aatcaaTGCTGGACCTGTTGCTGGCAGGGGGTTTGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGCAGAACAACCCGGATATGGACCCGGAACTGCGTGCCTTCTTTGACTTTAACTCCATGCATATGGAGCCGTGGGATGGCC‑CGGCGGGCATCGTGATGTCCGACGGTCGTTTTGCCGCCTGTAACCTCGACCGTAACGGTCTGCGTCCGGCGCGCTACGtcat < 1:356871/233‑1 (MQ=255) aaCATGGGGGATCTTCTGCTGGCAGGGGGGATGGATATCATCCGCGCCAGGCGTCTATTAGTACCCCCCGCCTGGCAGAACAACCCGGATATGGACCCGGAACTGCGTGCCTCCTTTGACTTTAACTCCATGCATATGGAGCCGTGGGATGGCC‑CGGCGGGCATCGTGATGTCCGACGGTCGTTTTGCCGCCTGTAACCTCGACCGTAACGGTCTGCGTCCGGCGCGCTACGTCAT‑CAc < 1:272893/239‑1 (MQ=255) aCATGCTGGAACTGCTGCTGGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGCAGAACAACCCGGATATGGACCCGGAACTGCGTGCCTTCTTTGACTTTAACTCCATGCATATGGAGCCGTGGGATGGCC‑CGGCGGGCATCGTGATGTCCGACGGTCGTTTTGCCGCCTGTAACCTCGACCGTAACGGTCTGCGTCCGGCGCGCTACGTCAT‑CAcc < 2:446917/239‑1 (MQ=255) gCTGGACCTGCTGCGGGCAGGGGGGATGGATATCATCCGCGCCATGCGTTTATTAGTACCACCCGCCTGGCAGAACAACCCGGATATGGACCCGGAACTGCGTGCCTTCTCTGACTTTAACTCCATGCATATGGAGCCGTGGGATGGCC‑CGGCGGGCATCGTGATGTCCGACGGTCGTTTTGCCGCCTGTAACCTCGACCGTAACGGTCTGCGTCCGGCGCGCTACGTCAT‑CACCAAAg < 2:162705/239‑1 (MQ=255) gCTGGAACTGCTGCTGGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGCAGAACAACCCGGATATGGACCCGGAACTGCGTGCCTTCTTTGACTTTAACTCCATGCATATGGAGCCGTGGGATGGCC‑CGGCGGGCATCGTGATGTCCGACGGTCGTTTTGCCGCCTGTAACCTCGACCGTAACGGTCTGCGTCCGGCGCGCTCCGTCAT‑CACCAAAg > 2:18199/1‑239 (MQ=255) tGGAACTGCTGCTGGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGCAAAACAACCCGGATATGGACCCGGAACTGCGTGCCTTCTTTGACTTTAACTCCATGCATATGGAGCCGTGGGATGGCC‑CGGCGGGCATCGGGATGTCCGACGGGCGTTTTTCCGCCCGTAACCCGCACCGGAAAGGGCCGCGGCCGgcggggaaagtcacaacacaaaaa > 1:418119/1‑218 (MQ=255) ggctctggttctgGCAGGGGGGTTGGATATCACCCGCGCCATGCGTTTATTAGTCCCCCCCGCCTGGCAGAACAACCCGGATATGGACCCGGAACTGCGTGCCTTCTTTGACTTTAACTCCATGCATATGGAGCCGTGGGATGGCC‑CGGCGGGCATCGTGATGTCCGACGGTCGTTTTGCCGCCTGTAACCTCGACCGTAACGGTCTGCGTCCGGCGCGCTACGTCAT‑CACCAAAGATa < 1:1006961/229‑1 (MQ=255) ggttgttctgCCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGCAGAACAACCCGGATATGGACCCGGAACTGCGTGCCTTCTTTGACTTTAACTCCATGCATATGGAGCCGTGGGATGGCC‑CCGCGGGCCTCGTGTAGTCCGACGGGCGTTTTTCCGCCGGTAACCCCGCCCCAAACGGGGTGGGGCCGGGGGGCTACGGCGT‑CCACAAAAAAAAGc > 1:279110/8‑239 (MQ=255) ctgctgctgGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGCAGAACAACCCGGATATGGACCCGGAACTGCGTGCCTTCTTTGACTTTAACTCCATGCATATGGAGCCGTGGGATGGCC‑CGGCGGGCATCGTGATGTCCGACGGTCGTTTTGCCGCCTGTAACCTCGACCGTAACGGTCTGCGTCCGGCGCGCTACGGCAT‑CACCAAAGATAAGc > 2:21282/1‑238 (MQ=255) gctgctgGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGCAGAACAACCCGGATATGGACCCGGAACTGCGTGCCTTCTTTGACTTTAACTCCATGCATATGGAGCCGTGGGATGGCC‑CGGCGGGCATCGTGATGTCCGACGGTCGTTTTGCCCCCCGGAACCCCCACCCGAACGGTCTGGTTCCGGCGcgccacgccacaacccaaaaaaaacaca > 1:20852/1‑221 (MQ=255) gttctgCCAGGCGGGATGGATATCATCCGCGTCATGCGTCTATTAGTACCACCCGCCTGGCAGAACAACCCGGATATGGACCCGGAACTGCGTGCCTTCTTTGACTTTAACTCCAt < 1:593517/113‑1 (MQ=255) gttctgCCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGCAGAACAACCCGGATATGGACCCGGAACTGCGTGCCTTCTTTGACTTTAACTCCAt > 2:593517/4‑116 (MQ=255) ctgctgGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGCAGAACAACCCGGATATGGACCCGGAACTGCGTGCCTTCTTTGACTTTAACTCCATGCATATGGAGCCGTGGGATGGCC‑CGGCGGGCATCGTGATGTCCGACGGTCGTTTTTCCGCCTGTAACCTCGACCGTAACGGACTGGGTCCGGGGCGCTACG‑CATCCCCCAAAGCTAAGCtcc > 2:756510/1‑237 (MQ=255) ctgctgGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGCAGAACAACCCGGATATGGACCCGGAACTGCGTGCCTTCTTTGACTTTAACTCCATGCATATGGAGCCGTGGGATGGCC‑CGGCGGGCATCGTGATGTCCGACGGTCGTTTTGCCGCCTGTAACCTCGACCGTAACGGTCTGCGTCCGGCGCGCTACGTACT‑CCCCCAAGATAAGCcca > 2:546435/1‑238 (MQ=255) | GCTTCTCCACTAACACCGTACCGCGCTGGCCGCTGGCGCAACCGTTCCGCTATCTGGCGCATAACGGTGAAATCAACACCATCACCGG‑TAA‑CCGCCAATGGGCGCGTGCGCGTACTTAT‑AAATTCCAGACACCGCTTATCCCTGACCTGCACGACGCCGCACCGTTCGTCAACGAAACCGGCTCTGACTCCAGTTCGATGGATAACATGCTGGAACTGCTGCTGGCAGGCGGGATGGATATCATCCGCGCCATGCGTCTATTAGTACCACCCGCCTGGCAGAACAACCCGGATATGGACCCGGAACTGCGTGCCTTCTTTGACTTTAACTCCATGCATATGGAGCCGTGGGATGGCC‑CGGCGGGCATCGTGATGTCCGACGGTCGTTTTGCCGCCTGTAACCTCGACCGTAACGGTCTGCGTCCGGCGCGCTACGTCAT‑CACCAAAGATAAGCTCA > NC_000913/3355372‑3355827 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |