| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,638,227 | A→G | 22.4% | E196G (GAG→GGG) | pitA → | phosphate transporter, low‑affinity, tellurite importer |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,638,227 | 0 | A | G | 22.4% | 111.4 / 4.2 | 67 | E196G (GAG→GGG) | pitA | phosphate transporter, low‑affinity, tellurite importer |
| Reads supporting (aligned to +/- strand): ref base A (22/26); new base G (11/6); total (35/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.60e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CTCTCATACGCTGATTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCA‑AGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCT‑TCG‑TGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGATGCCATCAACAACGTCGAAGCTTACTTTGAG > NC_000913/3638000‑3638465 | ctctCATACGCTGATTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTTTGATTTTCTTGCTGGCTTGCTCCCGGAGCGGGACCA‑AAAAACGCCCCCCGTTCCCCCTGACCCCACCCGGGCGGGaaacaa > 2:960190/1‑236 (MQ=255) tcATACGCTGATTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCA‑AGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAaaagaaa < 2:388284/238‑1 (MQ=255) cgtgtttggccgctttctcGGGATTGGTTTAACCAATGCTTTTGTGACCGGGACCTCAGTGGTTGATGCACTCAATTTCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCA‑AGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCa < 1:525071/222‑1 (MQ=255) aTTGGCGCGATCATCGGGTTTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAGTATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGCTTTTTTTGCTTCGTCGCTACTGGGTCGGGCCCACAGAAACGCCCCGGTACCCCCCTTA‑CCCAACGGGGCGGGAAAAGAAAAACgggcaaaa > 1:388284/1‑233 (MQ=255) aTTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGCTGCACTCAATATCCCGACAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTTTGCTTTTCTTTCTGCGTAGCTACCGGAGCGGCCCCC‑AGAAACGAGCCCGATTCCACCCGACCCCAACGGCCGGTGAAAAGAAAGTAGGCCAGaa > 2:920955/1‑239 (MQ=255) aTTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAACGAATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCTGCCTGTCGTTTGCTGGCGGTCTGCTTTTCTTGTCTCGCCGTTTCTGTAGCGGCCCAA‑CGAAAACCCCCCGTATCCACCTGACCCCCCCGGGACCTCAAAAAAAAAACCACAAGaa > 1:868721/1‑239 (MQ=255) aTTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTTTTGTTGCGTCGCTACTGGAGCGGCACCA‑AGAAACCCCCCCGGATCCCCCTGACCCCAGCGGGGCGTGGAAACAAAGACGGCAAGaa > 2:610860/1‑239 (MQ=255) aTTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGGGCGGCACCC‑AGAAACGCGCCCGTATCCACCCGACCCCAACGGGGCGTGAAAAGAAAGACgcacaaaa > 2:1012590/1‑232 (MQ=255) aTTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAACGGGCCCC‑AGAAACGCGCCCGTATCCACCTTACCCCAGCGGAGCGTGAAAAGAAAACAGGCAAGaa > 2:558317/1‑239 (MQ=255) gggTTTGTTTTACCCAGTGGTTTGAGGCCCGGGGCGGCGGTGTGTGATGCCCTCACTATCCCGAAAGTTTTAATTTTTTTCGGTTCTCTTATCGTTTCCCCGATTGTCGGCCTGTGGTTCGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCA‑AGAAACGCGCCCGTATCCCCCTGACCCCAGCGGGGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTg < 1:1012590/239‑1 (MQ=255) ttGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGAGGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCA‑AGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGAc < 2:241893/238‑1 (MQ=255) ttGGTTTAACCAAGGCGTTGATGCCCGGGCCGTCAGTGGGGGATGCACTCAATATCCCGAAATTATTAAGTTTTTTCGTTTCTTTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTCCTGGAGCGGCACCA‑AGAAACGCGCCCGTATCCACCTGCCCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGAc < 1:719891/238‑1 (MQ=255) tGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTTCTGCGTCGCTACTGGAGCGGCACCC‑AGAAACGCGCCCGTATCCACCTGACCCCAGCGGGGCGTGGAAAGAAAAACGGGAAGAAAAAACCGCCGTTTCGGAccg > 2:549952/1‑237 (MQ=255) tttacccgttGCTTTGGTTACGGGGAGGTGAGGGTTGGATGCACTAATTTGCCCGAATGTATTGAGTATTTTCGGTTTTCTGATCGTTTCCCCTATGGTCGGCCTGGTGTTTGCGGGCGGTCTGATTTTCTTGCTGCGTCGCTCCTGGGGCGGCACCA‑AGAACCGCGCCCGTATCCACCTGCCCCCATCGGAGCGTGAAAAGAAAGCCGGCAAGAAAAAGCCGCCGTTCTGGACGCGTa < 1:484127/230‑1 (MQ=255) tttAACCTGTGTGGTTATGACGGGGTCTTCGGTGGTTGATGCTCTCAATAACCCGAATGTATTAAGTATTTTCGTTTCTCTGATCGTTCCCCCTATTGGCGGCCTGGTGTTTGCTGGCGGTCTGATTTCCTTGCTGCGTCGCTACGGGAGCGGCACCA‑AGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTa < 1:460695/239‑1 (MQ=255) tttAACCAATGGGTTGATGCCCGGGCCGGTAGTGGTGGATGCACTCAATATCCCGAAAGTTTTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCA‑AGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTa < 2:975727/239‑1 (MQ=255) aCCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTTTTGCTGCGTAGCTCCTGGGGAGGCACCC‑AGAAACGCGCCCGGATCCACCGTGCCCCCTCGGAGCGCGAAAAAAAAAACGGCAAGAAAAAACCGCCCTTTTggcagcgcgttgt > 1:566084/1‑228 (MQ=255) aCCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGGGCGGCACCA‑AGAAACGCGCCCGTATCCACCTGACCCCACCGGGGCGTGAAAAGAAAAACGGCAAGAAAAAACCGCCCTTCTGGACGCGGATTg > 2:719891/1‑238 (MQ=255) tGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTTTTTCTGGCTCGCTACTGGGGCGGCCCCA‑AGAAACGCGCCCGTAACCACCCGCCCCCAGCGGGGCGGGAAAAGAAAACAGGCAAAAAAAAACCGCCCCTCTgggcacggtttgggggga > 1:611450/1‑223 (MQ=255) tGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTTTCCCGTCGCTCCTGGCGCGGCACCC‑AGAAACGCGCCCGTATCCACCTCACCCCAGCGGAGGCAGAAAAGAAAGACGGCAAGAAAAAACAGCCGCTCTGGGCGCGGATTgggccg > 1:810793/1‑236 (MQ=255) tGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCA‑AGAAACGCGCCCGGATCCACCTGACCCCCGCGGAGCGTGAAAAGAAAAACGGCAAGAAAAAGCCGCCGTTCTGGACGCGGATTGGGCTGa > 2:502833/1‑239 (MQ=255) gatgaCCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCCCTCCTGGGGCGGCCCCA‑AGAAACGCCCCCGTATTCCCCCTACCCCACCGGGACGGGAAAAGAAAAAAGGACAGGAAAAACCACCGCTCCGGACCCGTATTgccataacacct > 1:313096/1‑228 (MQ=255) ttgcgggggcttgagggggggATGCCCTCAATATCCGAAAAGTTTTAAGTTTTTTGGGTTCTCTGATCGTTTCCCCTATTTCCGGCTGGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGCCGCTACTGGAGCGGCACCA‑AGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCTTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTc < 1:46374/219‑1 (MQ=255) gggACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCCCCA‑AGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGGGAAAAGAAAGACGGCAAGAAAAAACCGCCGTTCTGGGCGCGTATTGCGCTGATCCTTTCCGCTa > 2:943735/1‑238 (MQ=255) gATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTTCTGCGTCGCTACCGGGCCGGCCCCA‑CGAAAACCACCCGTATCCACCTGACCCCCCCGGGGCGGCAAAACAAAGACGGCACGAAAAAGCCGCCGGTTCGGACGGGCATTTCGCTGATACttttcccccttacccgggcgtgttt > 1:757999/1‑217 (MQ=255) gATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCA‑AGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGGATTGCCCTGATCCTTTCCGCTATCGGCGGGGGGgttt > 2:262501/1‑238 (MQ=255) cACGCAATACCCGAAAAGTATGAGTTTTTTTCGGTTCTCTGACCGTTTCCCTTATGGTCGGCCTGGTGTTTGCGGGCGGTCTGATTTTCTTGCTGCGGCGCTACTGGAGCGGCACCA‑AGAAACGCGCCCGTATCCACCTGCCCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCa < 2:810793/238‑1 (MQ=255) gAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCA‑AGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAACCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGCGGGTTTCgaccgggggcgaccagg > 2:786059/1‑223 (MQ=255) aagtattaagtattTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCA‑AGAAACGCGCCCGTATCCACCTGACCCCAGCGGGGCGTGAAAAGAAAGACGGCAAGAAAAAACCGCCGTTCTGGACGCGGATTGCGCTGATCCTTTCCGCTATCGGCGGGGGGGTTTGCCACGGCGGGGACCATGGt > 2:178802/1‑239 (MQ=255) gttgttgcGGTTCTTGTATCGTTTCCCTTTTTGCCGGCCTGGTGTTTGCGGGCGGTTTAATTTTCTGTCGGGCTCCGTACGGGGGCGGCACAA‑AGAACCGCGCCCGTATCCCCCTGTCCCCAGCGGAGCGGGAAAAGAAAGCCGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGc < 1:943735/232‑1 (MQ=25) ccGGTTTTCTGATCGTTTCCCCTTTTGTCGGCCTGGTTTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCA‑AGAAACGCGCCCGTATCCCCCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGt < 2:727954/238‑1 (MQ=255) tctcTGCTCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTTTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCA‑AGAAACGCGCCCGTATCCCCCTGCCCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGt < 2:611450/239‑1 (MQ=255) tctGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCA‑AGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAACCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTTCGCTATCGGCGTGGCGGTTTTCCACGGGGCGCACCGTGGTCGAGAAGGCAATTGGCTGGttt > 2:1000873/1‑238 (MQ=255) gtctttttCCCTTATTGGCGGCTGGGGTTTTGGGGGCGGTCCTTTTTTCTTGGCGCGTCGCTCGGGGGGGGCCACCA‑AAAAACGCCCCGTTATCCACCTGCCCCGAGCGGAGCGTGAAAAGAAAGACGGAAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATg < 1:107938/233‑1 (MQ=25) ggcGGCCGGGTGTTTGCGGGCGGTTGGATTTTCTGGCTGCGTCGCTACGGGAGCGGCACCA‑AGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGGGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGt < 2:168397/237‑1 (MQ=255) gTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCA‑AGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCCCTATCGGCGTGGGGGTTTCGCCCGGCGCGAACGAAGGTGCGAAAGGGATTGGTGTGGTTTTGTTGGGattgatctgtt > 2:107938/1‑233 (MQ=255) tttttttgtGGCGGTCTGTTTTTTTTGTTGGCTCGCTACGGGGGCGGCCCCA‑AGAAACGCCCCCGTATCCCCCTGACCCCAGCGGAGGGTAAAAAGAAAGACGGAAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCcagc < 1:1000873/231‑1 (MQ=37) cGGTTTGATTTCCTTGCTGCGTCGCTACTGGAGCGGCACCA‑AGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGCCGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCT‑TCg‑tg < 2:755303/238‑1 (MQ=255) gcggcgtcgccgggggggCGGCCCCA‑AGAAACCCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCT‑TCG‑TGGTGAACATGAATGCCa < 2:536532/222‑1 (MQ=255) tgcGTCGCTACTGGAGCGGCACCA‑AGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTTGCCCGGCGCCAACGATGGGCAGCAAGGCATTTGGCTGGTTTTGGTGGGCTTGATTGGTGGCGGCCCACCAGGCT‑Tctgggggaaaagcaaacccccc > 1:95384/1‑218 (MQ=255) tgcGTCGCTACTGGAGCGGCACCA‑AGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCCGAAAGGCa > 1:613669/1‑171 (MQ=255) tgcGTCGCTACTGGAGCGGCACCA‑AGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCa < 2:613669/171‑1 (MQ=255) cgcgcgACGGGAGGGGCCACA‑AAAAACCCCCCCGGACCCACCGGACCCCAGGGGAGCGTGAAAAGAAAGACGGAAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCT‑TCG‑TGGTGAACATGAATGCCACTgg < 2:424197/236‑1 (MQ=37) tCGCTACTGGAGCTGCACCA‑AGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACAGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTACCGGCGTGGCGCTTTCGCACGCCCCGCACCATGGTCCGACAAGCATTTGCGCGGGTATGTTGGTATTGATTGGCGTCGGCCCAGCAACCC‑TCGCTGGTGaaacagatgacaaaggc > 1:388291/1‑223 (MQ=255) tCGCTACTGGAGCGGCACCA‑AGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCT‑TCG‑TGGGGGACATgctggttcttttaa > 2:121452/1‑226 (MQ=255) ggctcgtGGGGCGGCAACA‑AAAACCCCGCCCGTATCCCCCTGACCCGAGGGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCT‑TCG‑TGGTGAACATGAATGCCACTGGCt < 2:190554/232‑1 (MQ=38) ggAGCGGCACCA‑AGAAACCCGCCGGTACCCCCCTGACCCCAGCGGGGGGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCT‑TCG‑TGGTGAACATGAATGCCACTGGCTACGAAATc < 2:359585/239‑1 (MQ=255) gCGGCCCCA‑AGAAACGCGCCCTGACCCCCCCGCCCCCAGCGGGGGGTGAAAAAAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCT‑TCG‑TGGTGAACATGAATGCCACTGGCTACGAAATCac < 1:786059/238‑1 (MQ=38) gCACCA‑AGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCT‑TCG‑TGGTGAACATGAATGCCACTGGCTACGAAATAacccgt > 2:215960/1‑239 (MQ=255) gCACCA‑AGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCAAGGCGCGAACGATGGTCAGAAAAGCCTTGGTCTGGTTATGTTGGtc > 2:151456/1‑172 (MQ=255) cACCA‑AGAAACGCGCCCGTACCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCT‑TCG‑TGGTGAACATGAATGCCACTGGCTACGAAATCacccgt < 2:168677/238‑1 (MQ=255) acccccccccttccccccTGCCCCCAGGGGGGGGTGAAAAGAAAGGCGGAAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCT‑TCG‑TGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGa < 1:401915/222‑1 (MQ=37) cgcgCCCGTATCCACCTTACCCCAGCGTTCCGCGAAACGAACGCCGGCAAGAAAAAGCCGCCGTTCTGGGCGCGAATTGCGCTGATCCTTTCCGCTATCGGCGTAGCGTTTTCCCCCGAGGCGAGCGGTGGCCCGCACGGCAGTGGGCTCGCTTTTTTGGCATTGTTTTGCGTCCCGCCCCCAGGCC‑TCG‑CGGGGCACAGTAATTCCCCTGGGTAGGCAACTacccggacccgtcacac > 1:159604/1‑234 (MQ=255) cgcgCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCCCGGCGCGAACGATGGTCAAAAAGGCCTTGGTTGGGTTATTTTGGGATTGCTTGGCTGCGCGCCCTCAGGGTGTCG‑TGGTGAACA‑GAATGCCCCCTGCCACGAAAAAaccccgaccccggggg > 1:736203/1‑232 (MQ=255) ccccccTTACCCCCCTGCCCCGAGCGGGGCGAGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCT‑TCG‑TGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGATGcc < 2:789286/236‑1 (MQ=37) cgcCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGGATTGATTTGCTTGCCGCCAGCAGGCT‑TCG‑TGGTGAACATGAATGCCCCTGGCTCGGAAATCACCCTTACCCGGGGTGcc > 2:206589/1‑238 (MQ=38) ttATCCCCCTGCCCCCAGGGGGGCGGGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCT‑TCG‑TGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGATGCCATcaac < 2:843975/238‑1 (MQ=255) ccACCTGACCCCAGGGGAGCTGGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCT‑TCG‑TGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGATGCCATCAACAACg < 2:580230/239‑1 (MQ=255) ccctgccccagggggAGGGTGAAAAAAAAGCCGGCAAGAAAAGTCCGCCGTTCTGGACGCGTAGTGCGCTGATCCTTCCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCT‑TCG‑TGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGATGCCATCAACAACGTc < 2:479902/226‑1 (MQ=37) aCCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGGCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCT‑TCG‑TGGTGAACATGAATGCCCCTGGCTACGAAATCACCCGTACCCCGGATGCCATcaacactgt > 2:401915/1‑234 (MQ=255) cTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGGTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCT‑TCG‑TGGTGAACATGAATGCCACTGGCTACGCAATCACCCGTACCCGGGGTGCCACCAAAAACGTCgc > 2:845229/1‑238 (MQ=255) gACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGCTGGTCAAAAAGGCATTGGTCTGGTTATGTTGGGATTGATTGGCGTCGCGCCAGCAGGCT‑TCG‑TGGGGAACATTAATTGCCCTGGCTCCGGAAACCCCCGGCCCCCGGATGcccccaaacaagcccaaa > 1:34042/1‑223 (MQ=25) aCCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGGCTGGGTATGTTGGTATTGATTGGCGTCGCGCCCGCAGGCT‑TCG‑TGGGGAAACTGAATGCCACTGGCTACGGAATAACCCGTACCCCTGATGCCCTCCACAACGTcagagg > 2:76309/1‑234 (MQ=37) aCCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGAATTGGTCTGGTTATGTTGGGATTGATTGGCGTCGCGCCAGCAGGCT‑TCG‑TGGGGAACATGAATGCCACTGGCCACCAAATACCCCGTACCCGTGATGCCACCCACAAACTCGaa > 2:423306/1‑237 (MQ=38) cccgcgCGGAGCGTGAAAAAAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTACTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCT‑TCG‑TGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGATGCCATCAACAACGTCGAAGc < 2:670521/233‑1 (MQ=255) ccccAGCGGAGGGTAAAAAGAAAGAGGGAAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCT‑TCG‑TGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGATGCCATCAACAACGTCGAAGc < 2:313096/238‑1 (MQ=255) ggAGCGTAAAAAAAAAGCCGGCAAAAAAAGGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCT‑TCG‑TGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGATGCCATCAACAACGTCGAAGCTTACttt < 2:135619/238‑1 (MQ=255) aGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGGCCGAGCGATTGTCATAACGGCCTTGTTCTGGTTATGTTGGGATTGATTGGCGGTGCGCCATCAGACT‑TCG‑TGGGGAACATTGATGCAACCGGGTACGAAATCCCCCCGACCCCCGAAGCCATCAACAACgcccgaccattcttctac > 1:705272/1‑222 (MQ=255) | CTCTCATACGCTGATTGGCGCGATCATCGGGATTGGTTTAACCAATGCGTTGATGACCGGGACGTCAGTGGTGGATGCACTCAATATCCCGAAAGTATTAAGTATTTTCGGTTCTCTGATCGTTTCCCCTATTGTCGGCCTGGTGTTTGCTGGCGGTCTGATTTTCTTGCTGCGTCGCTACTGGAGCGGCACCA‑AGAAACGCGCCCGTATCCACCTGACCCCAGCGGAGCGTGAAAAGAAAGACGGCAAGAAAAAGCCGCCGTTCTGGACGCGTATTGCGCTGATCCTTTCCGCTATCGGCGTGGCGTTTTCGCACGGCGCGAACGATGGTCAGAAAGGCATTGGTCTGGTTATGTTGGTATTGATTGGCGTCGCGCCAGCAGGCT‑TCG‑TGGTGAACATGAATGCCACTGGCTACGAAATCACCCGTACCCGTGATGCCATCAACAACGTCGAAGCTTACTTTGAG > NC_000913/3638000‑3638465 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |