| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,027,435 | T→G | 3.9% | intergenic (+208/+173) | fre → / ← fadA | NAD(P)H‑flavin reductase/3‑ketoacyl‑CoA thiolase (thiolase I) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,027,435 | 0 | T | G | 3.9% | 320.7 / 4.5 | 115 | intergenic (+208/+173) | fre/fadA | NAD(P)H‑flavin reductase/3‑ketoacyl‑CoA thiolase (thiolase I) |
| Reads supporting (aligned to +/- strand): ref base T (61/47); new base G (2/4); total (64/51) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.05e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.03e-01 | |||||||||||
Only 100 of 116 total aligned reads displayed.
TGCGTTTGCATTTATCTGAGATATAAAAAAACCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGACCGATACACATCGTCGCCAGACCAA > NC_000913/4027209‑4027672 | tgggttttgtttttttttgtaaataAAAACACCCCGCCCCGACAGGGGGGAAGAACGGCAACTAAACTGTTATTCAGGGGCATTTAGATCTATGACGTAACTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GGCGCGTCTTATc < 1:701341/216‑1 (MQ=18) ggttttgaatttttcgagaataaAAAAAACCCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCg < 2:872966/219‑1 (MQ=21) ggcgttgactttgcctgaaaaaaaaaaacaCCCGCCCCGGGCAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATTTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGGCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCg < 2:672019/215‑1 (MQ=21) ttttccggaaataaAAAAAACCCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACaaa < 2:133659/229‑1 (MQ=255) tttATCATAGATAAAAAAAAACCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACaa < 2:309252/238‑1 (MQ=255) tATCTGAGATATAAAAAAACCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCCTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCCCA‑TCCGGCAATTGGGGCATG‑ATGCCTGATGCG‑ACGCT‑GTGCCGTCTTATCGTGCCTACACATa > 2:78128/1‑239 (MQ=255) agaTATAAAAAAACCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑Ga > 2:148825/1‑239 (MQ=255) aaaaaaaacCCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCg < 2:406762/237‑1 (MQ=255) aaaacCCCGCCCCTGACAGGCGGGAAGAACGGCAACGAAACTTTTAGTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAgg < 2:664475/239‑1 (MQ=255) aCCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCCATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCgg > 2:365503/1‑239 (MQ=255) aCCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTGGCGGCTTATCGTGCCTAACAAAAGT‑CC‑GAAACGTAGGCCgg > 2:303764/1‑239 (MQ=255) ccccTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCGAACCATGCCCGATGCGCCGCTGTCGCGTCTTATCGTGCCTACAAATAATCCGAACCGGAGGACGGATAAGGCGTTTTC‑GCCGCA‑TCCGCCAATTGGTGCATG‑AAGCCTGATGCGAACCCT‑GTCCGCTCTAACCG‑GCCCACAAAAAGT‑CC‑GAAACCGAGGCCgggcaac > 1:388200/1‑234 (MQ=21) ccccTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAAGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTATGCCGGATaaa > 2:357251/1‑238 (MQ=255) tGACAGGCGGGAAGAACGGGAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGt < 2:445649/239‑1 (MQ=255) cGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCTTAGGCCGGGTAAGCGGTTTAccc > 2:962334/1‑236 (MQ=255) gggAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCAAGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTAcgcc < 2:846402/238‑1 (MQ=255) ttATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAACAAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCCCATCCGGCCATTGGTGCatga > 2:494386/1‑238 (MQ=255) aTTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCCTG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGCAGGCCGGAAAAGGGGTTTACCCCCCACCCGGACATTtgtgaaaagac > 1:387616/1‑231 (MQ=21) aTTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGc < 1:435226/195‑1 (MQ=255) aTTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTCGGCCGCATCCGCCCATTGGTGCataatg > 2:374789/1‑238 (MQ=255) tGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑TTGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGcc > 1:253226/1‑166 (MQ=255) tGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGGGCTTACAAAAATC‑CC‑GAACCGTAGGCCGGGTAAGGCCTTTACCCCCCCACCGCCAAttcgggctaaacgccgcttc > 1:306494/1‑221 (MQ=18) tGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCCCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGCCTTATCGTCCCTCCAAATAGT‑CC‑GAACCTTAGGCCGGGAAAGGCTTTTACCCCCACCCCGGCAATTgggccataatcccgaat > 1:462506/1‑223 (MQ=18) gCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGc > 2:47552/1‑238 (MQ=255) aTTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGGGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GGCGCGTCTTATCAGGCCTAC‑ATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGttaaacccgctcaaacac < 2:911202/238‑18 (MQ=14) tttAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GGCGCGTCTTATCAGGCCTAC‑ATTGGTGCCGGATCGGTAGACCGGATACGGCGTTCACGCCGCATCCGGCAAGTGGttaaacccgctcaaacacc > 2:490141/1‑220 (MQ=14) attttttggcgtttttGGGAACCCATGCCTGATGCGGCGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTgg < 1:47552/224‑1 (MQ=18) aTCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGTGTGCAGGAGTCCTGGTGCCACCCTGgc > 1:355728/1‑239 (MQ=21) cTATGCCGTATCGGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGgcgc < 2:410659/239‑1 (MQ=255) aTGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCCGATGCGACGCTGgcgc > 2:264163/1‑237 (MQ=255) tGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGCGGTTTACGCCGCATCCGGCAATTGGGCCATGATGCCTGATGCGACGCTgggcggtg > 2:581808/1‑233 (MQ=255) gtttCTGGCAAACCAGGCCCGATGCTACGTTGTCCCGTCTTATCGATCCTACAAATAGGCCGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTAt < 2:599431/236‑1 (MQ=25) gttgtttggaaaaCATGCCCGTTGGCACGCTGTCGCGTCTTATCCGGCCTAAAAATAGCCCGACCCTTAGGCCGGATAAGGGGTTTCC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTAt < 1:746817/230‑1 (MQ=18) gTATCTGGCAAACCATGCCCGATGCGACGCTTGCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTAt < 2:316581/239‑1 (MQ=255) tATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGTCCGGGTCAGGCGTTTACGCCGCATCCGGCAATTGTTGCATGATGCCTGATGGGAGGCTGGCGCGTCTTTTc > 2:1001391/1‑239 (MQ=255) tATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATc > 2:287237/1‑239 (MQ=255) tATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GCCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATAGTGCCTGAGGCGACGCGGgcgggcgttata > 1:953818/1‑230 (MQ=18) tCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGACAAGGCGTTTACGCCCCATCCGGCCATTGGGGCATGTTGCCTAAACCGACGCTGCCCCGCCTTacctg > 2:530904/1‑235 (MQ=18) tcctttcccGGTGCGCGGCTGTCGGGTTTTTTCGTGGCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAAGTGGTGCATG‑ATGCCTGATGCG‑GCGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAt < 1:287237/233‑1 (MQ=21) cccGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGGGCATGAGGCCTGATTCGCCGCTGGCCCGCCTTATAAGGCCTACATTgggg > 2:510791/1‑236 (MQ=255) cGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCg < 2:796149/239‑1 (MQ=255) tGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATATT‑CC‑GGACCGTACGCCGGCTAAGGGGTTTACCCCGCATCCGGACATTGGTGCATGATGCCTGGTGCGACGCCTGCGCGTCTTTCCAAGCCTACAtagtggcgggac > 1:231628/1‑228 (MQ=18) tGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACCCTGGCCCGGCTTTTCAGGCCTCCATTGGGGCCggtt > 2:958521/1‑237 (MQ=255) gaaccTGTCGCGTCTTATCGTGCCTACAAATTGTCCGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCg < 2:1018670/234‑1 (MQ=255) gttgttgctttgtagtgTGCCTAAAAATAGGTCAACACGGAGGCCGGAATAGGGGTTTAC‑GGCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAg < 1:724391/223‑1 (MQ=18) gctgtcggttttttgcgggCCTAAAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAg < 1:365503/221‑1 (MQ=255) cgttgcgggttttttggTGCGTAAAAAGAGGCCGGACCGTAGGGCGGATAAGGCGTTTGCGGCCGC‑‑TCCGGAAATTGGTGCAGG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAg < 1:78128/223‑1 (MQ=18) tGTCGCGTCTTATCGTGCCTTCAAATAGACCGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGa < 2:842131/238‑1 (MQ=255) tCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAGTAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGGCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCg > 2:141174/1‑239 (MQ=255) tCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGGGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCCGGGCTACATGGGTGCGAGACGGGTAGAACg > 1:658829/1‑239 (MQ=21) ccTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGGAGGCCGGAAAAGGCGTTTACGCCGCATCCGGCAATTGGGGCATAATGCCCGATGCGAGGCTGGCGACGCTTATCCGGCCAAAACTGTGGCCGGCTCGGGAACCCGGAAAGGGGGTTCagg > 1:849085/1‑237 (MQ=18) ccTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGC‑CC‑GAACCGTAGGCCGGCAAAGGCGGTTACGCCGCATCCGGCCATTGGGGCATGATGCCCGATGCAACGCTGTCCGGTCTTATCAGCCCTCAATTGGGGACGGATGGGGCGACCGGGCAAgggggttccc > 1:904489/1‑231 (MQ=18) aaaTAGTCCGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCAt < 2:426087/141‑1 (MQ=255) tCCGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGAc < 1:510374/211‑1 (MQ=255) tCCGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGc > 2:823863/1‑239 (MQ=255) tCCGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATAGGTAGACCGGATAAGGCGTTCACGCCCCATCCGGc > 2:359868/1‑239 (MQ=255) tCCGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATCATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGCGCCGGACCGGTAGACCGGATAAGGCGTTACCTCCGCATCCGGc > 2:466081/1‑239 (MQ=255) tCCGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGGGCCTACAATTAGT‑CC‑GAACCGTAGGCCGGAGAAGGCGTTTACGCCGCATCCGGCCAATGGGGCATGATGCCCGATGCGACGCTGGCGCAGCCTATCACGCCTCCATTGTGGCCGGTCCGGTGGACCGGGAAAgggtttacggccccacccgcc > 1:361880/1‑220 (MQ=18) cGACCCGTTGGGCGGTTAGGGTGTTT‑C‑CCCGCACTCGGTCAATTGGGGCAGT‑AGGCCTGAGGGG‑ACGGT‑GGCGCTGCTTATCGGGCCTAAAAATAGT‑CC‑GACCCGTAGGCCGGATAAGGCGTTTACGGCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCaa < 1:141174/239‑1 (MQ=17) cGAACCGTAGGCCGGATAAGGCGTTTCC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCaa < 2:788740/239‑1 (MQ=255) cGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAg > 2:408999/1‑207 (MQ=255) cGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCaa < 2:904489/239‑1 (MQ=255) cGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCaa < 2:231628/239‑1 (MQ=255) cGAACCGTAGGCCGGATAAGGCGTTTAC‑CCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCaa < 2:50526/239‑1 (MQ=255) aaCCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGGGGTTACGCCCCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGCCTTTCCAGGCCCACATTGGTGCCGGAACGGTAGACCGGGAAAGGGGTTCACCCCACATCCGGCAAgg > 1:788740/1‑238 (MQ=21) aaCCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTg > 1:426087/1‑141 (MQ=255) aaCCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGt > 2:361411/1‑239 (MQ=255) tAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGCCGCGCCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGCTAAGGCGTTAACTCCCCATCCGGCAAGTGGTTa > 2:240922/1‑239 (MQ=255) aGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATaat > 1:660095/1‑87 (MQ=255) aGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACa > 2:601542/1‑181 (MQ=255) aTAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTAt > 1:1005297/1‑164 (MQ=255) aTAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTAt < 2:1005297/164‑1 (MQ=255) aTAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAg > 2:713160/1‑192 (MQ=255) aTAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAg < 1:713160/192‑1 (MQ=255) aTAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGACCGGTAGACCGGATAAGGCGTTCACGCCGCTTCCGGCAAGTGGTTAAACCCGcc > 2:416168/1‑238 (MQ=255) aaGGCGTTTAC‑GCCGCA‑TCCGGCAATGGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTTTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCa < 2:658829/239‑1 (MQ=255) tttCC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGGG‑ACGTT‑GTCGCGTCTTAGCGGGCCTACAAATAGT‑CC‑GAACCGTGGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAacac < 1:510791/238‑1 (MQ=255) tttAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCTTGATGGG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAacac < 2:202559/238‑1 (MQ=255) ttAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGTGTCCGGATCGGTCGACCGGAAAAGGCGTTCACCCCCCCTCCGGCCAATGGGTAAACCCCCCCAAacaac > 1:138842/1‑236 (MQ=18) ttAC‑GCCGCA‑TCCGGCAATGGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCg < 2:323282/239‑1 (MQ=255) tAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGAATGATGCCTGATGCGACGCTGGCGCGCCTTCTCCGGCCTACATTCGTGCCGGACCGGTCGACCGGACAAGGGGTTCAACCCCCAGCCGGCCACTGGTTCAAACCGCCCAAACAccc > 1:219860/1‑237 (MQ=18) atacctaacctCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCCACTCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGACTTATCAGGCCGACATTGTGGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCACCCCAAacaaca > 1:202559/11‑236 (MQ=18) cgcA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGCCCTACATTGGTGCCGGATCGGCAGACCGGATAAGGGGTTCCCGCCGCATCCGGCAAGGGGTTAAACCCGCCCCAAAACCATCGCaa > 1:917612/1‑239 (MQ=21) cccattCCGGCTATTGG‑GTATGTATGCCTGATGCG‑ACGTT‑GGCCGGTCTTATCGGGCCTACAAATGGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGCCCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCa < 1:303764/234‑1 (MQ=18) tCCGGCAATTGGTGAATG‑TGGCCTGATGCG‑ACCGT‑GTCGCCTCTTTGCGTGCCTAAAAAAAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTCCGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATAcc < 1:264163/239‑1 (MQ=21) tCCGGAATTTGGTGCATG‑GTGCCGTATGGG‑GCTCTGGTCG‑GTCTTATCGGGCCTACAAATAGT‑CC‑GCACCGGAGGCCGGATAAGGCGTTTCCGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATAcc < 1:840206/239‑1 (MQ=21) ttGGTGCATG‑ATGCCTGATGCG‑ACGCG‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCa < 2:953818/239‑1 (MQ=255) ggTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGa < 2:430810/239‑1 (MQ=255) tGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGAc < 2:917612/238‑1 (MQ=255) atgCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGGGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCgg < 1:649887/85‑1 (MQ=18) gCCTGATGCG‑ACGTC‑GTCGCGTCTTATCTTGCCTAAAAATAGT‑CC‑GAACCGTAGGCCGGAAAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATAcc < 2:34203/219‑1 (MQ=255) cTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATTCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGGGTTCACCCCGCATCCGGCAAGGGGTTAAACCCGCCCAAACACCCTCGCAAAACCCTGACCCAAACCGAAacaaaca > 1:967742/1‑235 (MQ=21) tGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGACCGGTAGACCGGCTAAGGCGTTCACGCCGCATCCGGCAAGGGGTTAAAACCGCTCAAACACCGTCGCAATACCCTGCACCAACCCGATACACAtcgtc > 2:36988/1‑238 (MQ=21) aCGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCCAACCCCTAACCCAGACCGATACACAtcgcgcccg > 2:86377/1‑232 (MQ=255) aCGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGGGGTTAAACCCGCTCAAACACCCCCCCAATACCCTGACCCAGACCGAAACACAccgcccccca > 1:128313/1‑232 (MQ=21) aCGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGAAAACCGGATAAGGCGGTCACGCCGCATCCCGCCAGTGGTTAAACCCGCCCACAAACCTCCCCCATACCCTGACCCAGTcccgtcccttaacaaaacat > 1:34203/1‑221 (MQ=18) cGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGCTAAGGCGTTCACGCCGCATCCGGCAAGGGGTTAAACCCGCCCAAACACCGTCGCCATACCCTGACCCAGACCGATACCAATCGCCGCCAg > 1:188131/1‑238 (MQ=255) cGCC‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGAc > 2:686128/1‑144 (MQ=255) cGCC‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGAc < 1:686128/144‑1 (MQ=255) tCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGACCGATACACCTCGTCGCCAGACCaa > 2:537897/1‑238 (MQ=255) | TGCGTTTGCATTTATCTGAGATATAAAAAAACCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTAC‑GCCGCA‑TCCGGCAATTGGTGCATG‑ATGCCTGATGCG‑ACGCT‑GTCGCGTCTTATCGTGCCTACAAATAGT‑CC‑GAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACATTGGTGCCGGATCGGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAAGTGGTTAAACCCGCTCAAACACCGTCGCAATACCCTGACCCAGACCGATACACATCGTCGCCAGACCAA > NC_000913/4027209‑4027672 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |