New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1470336 =	31 (0.320)	35 (0.360)	3/432	NT	53.0%	coding (979/1152 nt)	insI1	IS30 transposase
	?	NC_000913	= 1979270	NA (NA)					intergenic (‑55/‑483)	insA/uspC	IS1 repressor TnpA/universal stress protein

ATCCTTAGACTCAGGGGCAAAGATTCTGTCTCAGTAAATCAGGCTCTTACCGACAAATTCCTGAGTTTACCGTCAGAACTCAGAAAATCACTGACATGGGACAGAGGAATGGAACTGGCCAGACATCTAGAATTTACTGTCAGCACCGGCGTTAAAGTTTACTTCTGCGATCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAA‑ACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATACAA  >  NC_000913/1470135‑1470567                                                                                                                                                                                                          |                                                                                                                                                                                                                                         attcttagtccaaGGGGCAACAATTTCGTCCCAGTAAATCAGGCTGTTCCCGACAAAGTCCTGAGTTTACCGTCAGAACTCAGAAAATCAATGACATGGGACAGAGGAATGGAACTGGCCAGACATCTAGAATTTACTGTCAGCACCGGCGTTAAAGTTTACTTCTGCGATCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTaa                                                                                                                                                                                                     <  1:888639/227‑1 (MQ=1)  cccttagctccAGGGGTAAATTTTCTGTCTCAGTAAATAAGGTTCTTTCAGACAAATTCCTGAGTTTACCGTCAGAACTCGGAAAATCACGGACATGGGACAGAGGAAGGGAACTGGCCAGGCATCTAAAAGTTACTGTCAGCACCGGCGTTAAAGTTTAGTTCTGCGCTCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTaaa                                                                                                                                                                                                    <  1:386990/229‑1 (MQ=1)              agtggatctgcggttggcttgttttacggcaggaatggcaaatatagcggtgatagacggcggtgcttttgccgataagcaccaccccggcagtagctgaacaggagggacagctgatagaagcagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCtt                                                                                                                                                                                        >  1:99702‑M1/189‑239 (MQ=255)                ggaaaaaATTCTGTCTCAGTAAAGCAGGCTCTTGCCGACAAATTCCTGTGTTTCCCGTCGGAACGCAGAAAAGCACTGGCATGGGACAGAAGAATTGAACTGGCCATACATCTAGAATTTACTGTCAGCACCGGCGTTAAAGTATACTTCTGCGATCCGCAGAGTCCGTGGCAGCGGGGAACAAATGAGAACACAAATTGGCTAATTCGGCAGTACTGGCCTAAAAAGACGTGTCtt                                                                                                                                                                                        <  1:787723/234‑1 (MQ=1)                         tccgTCTCAGTAAATCAGGCTCTTACCGACAAATTCCTGAGTTTACCGTCAGAACTCAGAACATCACTGACATGGGAAAGAGGAATGGAACTGGCCAGACATCTAGAATTTACTGTCAGCACCGGCGTTAAAGTTTACTTCTGCGATCCTCAGAGTCCTTTGCAGCGGGGAAACAATGACATCGAAACTGGGCAAATTCGACAGTACTTTCCTAAAAAGAAATGACTAGCCCaaaaaaa                                                                                                                                                                             >  1:974787/4‑234 (MQ=1)                               tccgTAAACCAGGCTCTTACCGACAAATTCCTGAGTTTACCGGCAAAACTCAGAAAATCCGTGACATGGGACAGAGGAATGGAACTGGCCAGACATCTAGAATTTACTGTCAGCACCGGCGTTAAAGTTTACTTCTGCGATCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACa                                                                                                                                                                       <  1:479203/236‑1 (MQ=0)                               gcaggaactaaGGCTCTTACCGAAAAATTCCTGAGTGTACCGTCAGAACTGAGAAAATGACTGACATGGGAAAGAGGAATTGAACTGGACAGGCATCTAGAATTTACTGTAAGCCACGGCGTTAAAGTTTACTTCTGCGATCCGCAGATGCCTTGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACa                                                                                                                                                                       <  1:928406/229‑1 (MQ=1)                                               cgaacccgcattgcgtgtgttttccggagttgcttttgccgttacgcaccaccccgtaagtacctgaacaggagggacaggtgatcgaaacagaagccactggagctactgaaaaacaacatcatacgttaaatcagtaagttggcagcaacaccAAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGt                                                                                                                                                        >  1:487622‑M1/156‑238 (MQ=255)                                                   gtcggatctcgccttgtggtcggctgttctttttcctttacgccaccccccggtagtagccgaacaggaaggaaagctgatagaaacaaaagccactggagcacctcaaaaacaccaacatacactaaatcagtaagttggcagcatcaccGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTtgctg                                                                                                                                                   >  1:541261‑M1/152‑239 (MQ=255)                                                      ggtattgggctgttgcccggcgtgtcttttgccgtaactgacccccccgtcagtagctgaacaggagggaccgctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagaatcaccGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTc                                                                                                                                                >  1:903060‑M1/149‑239 (MQ=255)                                                      cggtttgcccttgggtccggggatgcttgttcccttgaacaccaccccgtaagtagctgaactgaagcgcaagcttatagaaacagaagcccctggagcacctcaaaaacaccatcatacactaaatcagtaagttgacagcatcaccGAGAACACAAATGGGCTAATGCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTc                                                                                                                                                >  1:781226‑M1/149‑239 (MQ=255)                                                      aaaattctgtaGTTTACCGTCAGAACTAAAAAAAGCACTGACATGGGACAGAGGAATGGAACTGGCCAGACATCTAGAATTTACTGTCAGCACCGGCGTTAAAGTTTACTTCTGCGATCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTtgctgcgc                                                                                                                                                <  1:18960/229‑3 (MQ=0)                                                                 gtttctctccaaaaCTCTGAAAAATCCTGACATGGGACAGAGGAATGGAACTGGCCAGACATCTAGAATTTACTCTCAGCACCGGCGTTAAAGTTTACTACTGCGATCCGCAGAGTCCTTGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTGCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCGCAGCTAa‑acaa                                                                                                                                     <  1:864848/226‑1 (MQ=1)                                                                     accggtaGAACTCAGAAAATCACTGACATGGGACAGAGGAATGGAACTGGCCAGGCATCTAGAATTTACTGTCAGCACCGGCGTTAAAGTTTACTTCTGCGATCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGa                                                                                                                                                                    <  1:234296/198‑1 (MQ=1)                                                                                             caccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAA‑ACAACAGACCGAGAAAGACACTGAAGTTCaaaa                                                                                                        >  2:1233327‑M1/110‑239 (MQ=255)                                                                                                    aggtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAA‑ACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGaa                                                                                                 >  2:328265‑M1/103‑239 (MQ=255)                                                                                                     gaaggggAATGGAACTGGCCATACATCTTACATTTACTGTCAGTCCGGGCGTTAAAGTTTACTTCTGCGATCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAA‑ACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGaa                                                                                                 <  1:610822/233‑1 (MQ=1)                                                                                                        cagtcgctgaacaggagggacagctgatagaaccagaagccactggagcacctcaaaaaccccatcatacactaaatcagtaagttggcagcatcaccGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAA‑ACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAagag                                                                                             >  2:301836‑M1/99‑239 (MQ=255)                                                                                                         agGAATGGAACTGGCCAGACATCTAGAATTTACTGTCAGCACCGGCGTTAAAGTTTACTTCTGCGATCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACCTGAACTAGATCTGGTTTCTACTCCACAAA‑CAAACAAACCGGAAAAGAACCAGACATTAAAAAAACCAAAAaaga                                                                                            >  1:99342/1‑239 (MQ=1)                                                                                                                 aacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAA‑ACAACAGACCGAGAAAGACACTGAAGTTCCAAACACCGAAAGAGATAATTGaa                                                                                    <  2:520266‑M1/150‑1 (MQ=255)                                                                                                                 aacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGCCTTGCCCAATATACTCAACATGAACTAGATCTGGTTACTGCTCAGCTAA‑ACAACCGACCGAAAAAGACAATGAAGGTCAAAAaacccaaagagaaaaatcat                                                                                    <  1:328265‑M1/150‑9 (MQ=255)                                                                                                                   caggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAA‑ACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAg                                                                                  <  2:181546‑M1/152‑1 (MQ=255)                                                                                                                     ggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATAc                                                                                                                                                                             >  1:1081961‑M1/86‑147 (MQ=255)                                                                                                                     ggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATAc                                                                                                                                                                             <  2:1081961‑M1/62‑1 (MQ=255)                                                                                                                         ggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAA‑ACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGgtgt                                                                            <  2:117134‑M1/158‑1 (MQ=255)                                                                                                                          gacagctgatagaaacagaagccactggagcacctcaaaaacaccatcattccctaaatcagtaagttggcagcatcaccGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAA‑ACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGgtgt                                                                            >  2:444842‑M1/81‑238 (MQ=255)                                                                                                                              gctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGGTGCTGCTCAGCTAA‑ACAACAGACCGAGAAAGCCACTGAAGATCAAAACACCGAAAGAAAAAATTGAAAGGGGGGTTGCAt                                                                       <  1:166155‑M1/163‑1 (MQ=255)                                                                                                                                 ctaacaaatcaaagcctctgtagcccctcaaaatcaccataacgcactaaatcagtacgttggcagcaacaccGAAAACTCAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAA‑ACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGa                                                                    >  1:461373‑M1/74‑239 (MQ=255)                                                                                                                                  atagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACa                                                                                                                                                                       >  2:629192‑M1/73‑140 (MQ=255)                                                                                                                                  atagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACa                                                                                                                                                                       <  1:629192‑M1/68‑1 (MQ=255)                                                                                                                                    agaaacagaagccactggagaacctcaaaaaaaccatcatacactaaatcagtaagttggcagcatcaccGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGCCTTGCCCAATATACTCAACATGAACTAGATATGGTTGCTGCTCAGCTAA‑ACAACAGACCAAGAAAGACCCTGAAGATCAAAAAACCGCAAGAGGTAATTGAAAGGGGTTttgcattaaaag                                                                 <  1:729633‑M1/169‑6 (MQ=255)                                                                                                                                       aacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAA‑ACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGAtt                                                              >  2:384709‑M1/68‑239 (MQ=255)                                                                                                                                         cagaagccactggagcacctcaaaaacaccatcatccactaaatcagtaagttggcagcatcaccGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTACCCAAAATACTCAACATGAACTAGATCTGGTTGCTGCACAGCTAACACAA‑AGACCGAGAAATAAACTGAAGTTATAAAAACCGAACGAGTAAATTGAAAGGGGTGTAGGATTGACAGATTGa                                                            <  1:1209904‑M1/174‑1 (MQ=255)                                                                                                                                            aagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAA‑ACAACAGACCGAGAAAGa                                                                                                                       <  1:592950‑M1/115‑1 (MQ=255)                                                                                                                                            aagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAA‑ACAACAGACCGAGAAAGa                                                                                                                       >  2:592950‑M1/63‑177 (MQ=255)                                                                                                                                            aagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAA‑ACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATc                                                         <  2:308444‑M1/177‑1 (MQ=255)                                                                                                                                            aagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCCCCGCTAA‑ACAACAGACCGAGAAACACACTGAAGTTCAAAACACCGAAAGAGATAATTTAAAAGGgggttaaattgaaaaattaaaac                                                         <  1:384709‑M1/177‑12 (MQ=255)                                                                                                                                             agccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGt                                                                                                                                                        <  2:642376‑M1/83‑1 (MQ=255)                                                                                                                                                 accggtgtgaaatgtgccTTCTGCGGTGCTCAGGGGCCTTGGCAGTGGGGAACAAATGAGAACCCAAATGGGCTAATTCGGCAGGACGTTGCTAAAAAGACATGTATGGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCGCAGCTAA‑ACAACAGAACGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTacac                                                    <  1:743269/222‑1 (MQ=11)                                                                                                                                                             caaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAA‑ACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATa                                                                                          >  1:853424‑M1/46‑189 (MQ=255)                                                                                                                                                             caaaaacaccatcatacactaaatcagtaagttggcagcatcaccGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAA‑ACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATa                                                                                          <  2:853424‑M1/144‑1 (MQ=255)                                                                                                                                                                  cTTCTGCGATCCTCAGAGGCCGTGGCAGGGGGGAACAAATGAGAACACAAAGGGGCTAATCCGGCAGTACTTTCCTAAAAAGACATGTCATGCCCAATATACTCAACATTAACTAGATCTGGTTGCTGCTCAGCTAA‑ACAACAGACCGAGAAAGACACGGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGTTGTTGCATTGACAGATTGTATCTACACTTGGGAAAGTCAGAAtt                                   <  1:1220200/239‑1 (MQ=11)                                                                                                                                                                   ttCTGCGATCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAA‑ACAACAGACCGAGAAAGACACTGAAGTTCAAACGACCGAAAGAGATAATGGAAAGGGGGGTTGCATTGCCAGATTCAATCTACCCTGTTGAAATTAGGAAttt                                  >  2:53362/1‑239 (MQ=11)                                                                                                                                                                             cTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAA‑ACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGGGTTGAAATGCCAGATTGAAACTACACTCTTCAAATTAAAAATTTAGGgttgggt                        >  1:635398/1‑235 (MQ=11)                                                                                                                                                                              actaaatcagtaagttggcagcatcaccGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCt                                                                                                                                            <  1:104645‑M1/95‑1 (MQ=255)                                                                                                                                                                              actaaatcagtaagttggcagcatcaccGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCt                                                                                                                                            >  2:104645‑M1/29‑123 (MQ=255)                                                                                                                                                                                    tCCTTGGCATCTGGGAAAAAATTAATACCCAAATGGGCTAATTCGGCAACACTTCCCTAAAATGGCCTGTCTTGCCCAATATCCACAACAATAACCAGATATGGTTTCTGCCTAGCTAA‑ACAACAGACCGAGAAAGACACGGAAGTTCAAAACACCGAAAGAGATTATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTa                 <  1:210157/239‑1 (MQ=14)                                                                                                                                                                                       atGGCAAGGGGGAACAATTTAGAACACAACTGGGCTAATTAGTCAGAACTTTCCTAAAAAGACATGTATTGCTCAATATAGTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAA‑ACAACAGACCCAGAAAGCCACTGAAGTTCAAATACCCGAAAGAGATAATTAAAAAGGGAGTTGCATTGACAGATTGAATATACACGGGTGCATTTCAGCTTTTAGGTTTTGCtttttctatgg              >  1:135631/2‑232 (MQ=11)                                                                                                                                                                                         ggCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAA‑ACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGt            >  2:1168411/1‑239 (MQ=255)                                                                                                                                                                                         ggCAGCAGGGAAAAAATGAGTACACAAATGGGCTAATTCGTCAGTACTTTCATAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAA‑ACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGt            <  1:685301/239‑1 (MQ=255)                                                                                                                                                                                              ggcagcatcaccGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGc                                                                                                                                                                                      <  2:857537‑M1/53‑1 (MQ=255)                                                                                                                                                                                              ggcagcatcaccGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGc                                                                                                                                                                                      >  1:857537‑M1/13‑65 (MQ=255)                                                                                                                                                                                              cGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAA‑ACAACAGACCGAGAAAGACACTGAAGTTTAAAACACCGAAAGAGTAAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACCCTGTTGAATTTAAGACTTTAGGTTTTGCTTTTGTTACT‑GTGaaaaa      >  1:838743/1‑238 (MQ=14)                                                                                                                                                                                              cGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAA‑ACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTacac                                                    >  1:616263/1‑194 (MQ=11)                                                                                                                                                                                              cGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAA‑ACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTacac                                                    <  2:616263/194‑1 (MQ=11)                                                                                                                                                                                               gcagcatcaccGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAA‑ACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGgtgt                                                                            <  2:1158113‑M1/158‑1 (MQ=255)                                                                                                                                                                                               gcagcatcaccGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAA‑ACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGgtgt                                                                            >  1:1158113‑M1/12‑169 (MQ=255)                                                                                                                                                                                                gggAACAAATGAGAACACAACTGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTATTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAA‑ACAACAGACAGAGAAAGACACTGAAGTTCATAACACCAAAAGAGACAATTGAAAGGGGTGTTGCATTGCACGAATCAATCTAAACTGTTAAATTTTAGGATTTGGGATTTTTTTTTTTTAATGGTTaaaaaa     >  1:1124965/1‑237 (MQ=11)                                                                                                                                                                                                    aaaaaTGAGATCCCCAAGTGGCTAATTCGGGAGTAATTTCCGAAAAAGACATGTAGTGGCCAATATACTAAACATGAACTAAGTCTGGTTGCTGCTCAGCTAA‑ACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATacaa  <  1:474176/236‑1 (MQ=17)                                                                                                                                                                                                    aaaaaTGAAAACAAAAATGGGCTAATTCGGCAGGACTTTCCTAAAAAGACATGTCTTGCCCAATATACCCAACATGAACTAGATCTGGTTGCTGCTCAGCTAA‑ACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATacaa  <  1:1247257/236‑1 (MQ=255)                                                                                                                                                                                                    aCAAATTGGAACCCAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATAGACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAA‑ACAACAGACCGAGAAAGGCACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATacaa  <  1:842429/238‑1 (MQ=255)                                                                                                                                                                                                    aCAAATGGGAACCCCAGTGGGTTAATGCGGCAGTACTTTCCTAAAAATACATGTCTTGACCAATATACTCAACAGCAACTAGAGCAGGTTGCTGCTCAGAGAA‑ACAACAGACAGAGAAAGACACTGAAGTTCACAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCGACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATacaa  <  1:611561/238‑1 (MQ=17)                                                                                                                                                                                                    aCAAATGAGAACCTCAATGGGCTAATTCGGCCGTACTTTCCTAAAAAGACATGTCATGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAA‑ACAACAGTCCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATACTCGAAAGGGGTGTTGCATTGACATATTGAATCTACCCTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATacaa  <  2:955752/238‑1 (MQ=17)                                                                                                                                                                                                    aCAAATGAGAACACAAATGGGCTAATTCGGCAGTTCTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAA‑ACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATacaa  <  2:150383/238‑1 (MQ=255)                                                                                                                                                                                                    aCAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAA‑ACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATacaa  <  2:169671/238‑1 (MQ=255)                                                                                                                                                                                                    aCAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAA‑ACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATacaa  <  2:1033305/238‑1 (MQ=255)                                                                                                                                                                                                    aCAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAA‑ACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATacaa  <  2:933889/238‑1 (MQ=255)                                                                                                                                                                                                    aCAAATGAAAACAAAAATGGTGTAATTCGGAAGTACTTTCCTAAAAAACCATCTCTTGGCCAATATATGCAAAATGAACTAGATCTGGTTGCTGCTCAGCTAA‑ACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATacaa  <  2:1253320/238‑1 (MQ=17)                                                                                                                                                                                                          |                                                                                                                                                                                                                                         ATCCTTAGACTCAGGGGCAAAGATTCTGTCTCAGTAAATCAGGCTCTTACCGACAAATTCCTGAGTTTACCGTCAGAACTCAGAAAATCACTGACATGGGACAGAGGAATGGAACTGGCCAGACATCTAGAATTTACTGTCAGCACCGGCGTTAAAGTTTACTTCTGCGATCCTCAGAGTCCTTGGCAGCGGGGAACAAATGAGAACACAAATGGGCTAATTCGGCAGTACTTTCCTAAAAAGACATGTCTTGCCCAATATACTCAACATGAACTAGATCTGGTTGCTGCTCAGCTAA‑ACAACAGACCGAGAAAGACACTGAAGTTCAAAACACCGAAAGAGATAATTGAAAGGGGTGTTGCATTGACAGATTGAATCTACACTGTTGAAATTCAGAATTTAGGTTTTGCTTTTGTTACTGGTGAAAATACAA  >  NC_000913/1470135‑1470567

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.