Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,838,946 A→T 9.2% S234C (AGT→TGT)  yicL → EamA family inner membrane putative transporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,838,9460AT 9.2% 437.0 / 2.2 142S234C (AGT→TGT) yicLEamA family inner membrane putative transporter
Reads supporting (aligned to +/- strand):  ref base A (42/83);  new base T (13/2);  total (57/85)
Fisher's exact test for biased strand distribution p-value = 1.02e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 143 total aligned reads displayed.

CTCTCCTGCCGCGTTGTTCTGGGGCATTGCCTCGGCATTTGCTGCTGCATTCTATACCACCTATCCCTCAACGCTAATTGCCCGCTATGGCACGTTACCAGTCGTCGGCTGGAGTATGCTGATTGGC‑GGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGTCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTGGC‑GGTCCAAAAGCCAGCATTTTGAGCTGTG‑CAGAACCATTAAGTAGCGCGCTAC‑TCTCTTTGCTGTTGCTGGGGATC‑ACGTTCACATTACCGGACTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCC  >  NC_000913/3838708‑3839182
                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                   
  ctcCTTCCGTGTTGTTCTTGTGCATTGCCTCGGCATTTGCTTCTGCATTCTATCCCACCTAGCCCTCAACGCTAATTGCCCGCTATGGCACGTTCCCAGTCGTCGGCTGGAGTATGCTGATTGGC‑GGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGt                                                                                                                                                                                                                                                   <  1:388104/239‑1 (MQ=255)
  ctcCTGCCGGGTTGTTTTGGGGCATTGTCTCGGCATTGGCTGCTTCATTCTATACCACCTATCCGTAAACGTTAATTGCCCGGTATGGCCCGTTACCAGTCGTCGGCTGGAGTATGCTGATTGGC‑GGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGt                                                                                                                                                                                                                                                   <  1:578396/239‑1 (MQ=255)
  ctcCTGCCGCGTTGTTCGGGGGCATTGCCTCGGCATTTGCTGCTGCATTCTATACCACCTATCCCTCAACGCTAATTGCCCGCTATGGCACGTTACCAGTCGTCGGCTGGAGTATGCTGATTGGC‑GGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGt                                                                                                                                                                                                                                                   <  2:1263112/239‑1 (MQ=255)
     cttgcgggttgttCTGGGGCATTGCCGCGGCATTTGCTGCTGCATTCTATACCACCTATCCCTCAACGCTAATTGCCCGCTATGGCACGTTACCAGTCGTCGGCTGGAGTATGCTGATTGGC‑GGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGTCTg                                                                                                                                                                                                                                                <  2:896613/232‑1 (MQ=255)
     ctcccGCGTTTTGCTGGGGCATTTCCCCGGCATTTGCTGCTGCATTCTATACCCCCTATCCCTCAACGCTAATTGCCCGCTATGGCACGTTACCAGTCGTCGGCTGGAGTATGCTGATTGGC‑GGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGTCTg                                                                                                                                                                                                                                                <  1:1063614/236‑1 (MQ=255)
     cTGCCGCGTTGTTCTGGGGCATTGCCTCGGCATTTGCTGCTGCATTCTATACCACCTATCCTTCAAGCCTATTTGCCCGCTATGGCACGTTACCAGCCGTCGGCTGGGGAATGC‑GGTTGGCGGGTCTGATTTTGTTGCCTTTTTATGCCAGAAAAGGACCAAA‑CTTTTCCTTTAACGGCAGTTTTTTTTTGGGGTTTTTTTTTTT‑GGGGGTCATTGGTACGTCCCTGCAATTTAGTCtt                                                                                                                                                                                                                                                >  2:1069804/1‑238 (MQ=255)
             ttgttCTGGGGCATTGCCTCGGCATTTGCTGCTGCATTCTATACCACCTATCCCTCAACGCTAATTGCCCGCTATGGCACGTTACCAGTCGTCGGCTGGAGTATGCTGATTGGC‑GGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCTGGGGTTTTTTTTTTT‑GGGGGGCATTGGTAAGTCCCTGACATTTTGtttttaacctaa                                                                                                                                                                                                                                        >  2:125589/1‑228 (MQ=255)
              tgttCTGGGGCATTTCCTGGGCATTTGCTGCTTCATTCTATACCACCTATCCCTCAACGCTAATTGCCCGCTATGGCACGTTACCAGTCGTCGGCTGGAGTATGCTGATTGGC‑GGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGTCTGT‑ACCTGa‑a                                                                                                                                                                                                                                      <  2:1205455/238‑1 (MQ=255)
                  gtgaataagagccagggCATTTGCTGCTGCATTCTATACCACCTATCCCTCAACGCTAATTGCCCGCTATGGCACGTTACCAGTCGTCGGCTGGAGTATGCTGATTGGC‑GGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGTCTGT‑ACCTGA‑AAGGAg                                                                                                                                                                                                                                 <  2:782535/224‑1 (MQ=255)
                  cTGGGGCATTGCCTCGGCATTTGCTGCTGCATTCTATACCACCTATCCCTCAACGCTAATTGCCCGCTATGGCACGTTACCAGTCGTCGGCTGGAGTATGCTGATTGGC‑GGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGTCTGT‑ACCTGA‑AAGGAg                                                                                                                                                                                                                                 <  2:159341/239‑1 (MQ=255)
                    ggggCTTTGCCTAGGCATTTGCTGCTGCATTCTATACCACCTTTCCCTCAACGCTAATTGCCCGCTATGGCACGTTTCCAGTCGTCGGCTGGAGTATGCTGATTGGC‑GGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGTCTGT‑ACCTGA‑AAGGAGca                                                                                                                                                                                                                               <  2:46352/239‑1 (MQ=255)
                    ggggCATTGCCTCGGCATTTTCTGCTGCATTCTATACCACCTATCCCTCAACGGTAATTGCCCGCTATGGCACGTTACCAGTCGTCGGCTGGAGTATGCTGATTGGC‑GGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGTCTGT‑ACCTGA‑AAGGAGca                                                                                                                                                                                                                               <  2:1103918/239‑1 (MQ=255)
                          ttGCCTCGGCATTTGCTGCTGCATTCTATACCACCTATCCCTCAACGCTAATTGCCCGCTATGGCACGTTACCAGTCGTCGGCTGGAGTATGCTGATTGGC‑GGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCCGGTTGATTTTGGCGGTTTTTTATTT‑GGTGGTCATTTGGACGTCCCTGACATTTAGTCTTT‑ATCCGA‑CAGGAGccacatta                                                                                                                                                                                                                         >  2:39314/1‑232 (MQ=255)
                          ttGCCTCGGCATTTGCTGCTGCATTCTATACCACCTATCCCTCAACGCTAATTGCCCGCTATGGCACGTTACCAGTCGTCGGCTGGAGTATGCTGATTGGC‑GGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGGTTGATTCTGGCGTTTTTTTATTT‑GTGGGGCATTGGTAAGTCCCTGCCTTTTTG‑CTGTGACCTTA‑AAGGGGCCCa‑atta                                                                                                                                                                                                                        >  2:173448/1‑239 (MQ=255)
                               tttgcttttgtcgtctcATTTTATACCCCCTCACCCCCAACGCATATTGCCCGTTAGGGGTCGGTTTCAGTCTGTGGCTGGAGTATGCGTATTGGC‑GGTGTGGTTCTTGTTCCTTTTTATGCCAAGCAAAGAACAAATCTTTG‑CGTTAACGGCAGTTTGATTTTGGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGTCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTgg                                                                                                                                                                                                                   <  1:173448/223‑1 (MQ=255)
                               ccGGCTTTTGCTGCTGCATTCTAGCCCCCCTTTCCCTCAACGCTAATTGCCCGCTATGGCACGTTACCAGTCGTCGGCTGGAGTAAGCTGATTTGC‑GGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGTCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTgg                                                                                                                                                                                                                   <  1:1209672/238‑1 (MQ=255)
                                 ggCATTTGCTGCTGCATTCTATACCACCTATCCCTCAACGCTAATTGCCCGCTATGGCACGTTACCAGTCGTCGGCTGGAGTATGCTGATTGGC‑GGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGTCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTGGC‑g                                                                                                                                                                                                                <  2:1278065/239‑1 (MQ=255)
                                        gctgctgcATTCTATACCACCTATCCCTCAACGCTAATTGCCCGCTATGGCACGTTACCAGTCGTCGGCTGGAGTATGCTGATTGGC‑GGGATGATTTTGTTGCCTTTTTTTGCCAGACAAGGAACCAC‑CTTTTTCGGTTAAGGCCGTTTGAATCTGGGGTTTTTTTTTTT‑TTGGGCCATTGGTACGGCCCTTACATTTTGCCTTT‑TCCCTA‑AAAGGGCACA‑ATTAATTgtggttcccaa                                                                                                                                                                                                          >  1:1147050/1‑229 (MQ=255)
                                        gctctttccttCTATCCCCCCTATCCCTCAACTCTAATTGCCCGTTATGGCCCGTTACCAGTCGTCGGCGGGAGTATGCTGATTGGC‑GGTCTGATTCTGTTGTCTTTTTATGCCATACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGTCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTGGC‑GGTCCaaa                                                                                                                                                                                                         <  1:1047057/230‑1 (MQ=255)
                                             tttttttcttccccccTTTCCCCCAACATTAATTGCCGGTTTTGGGACGGTGCCGTTCGTCGGCTGGAGTAGTGTGATTGGC‑GGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGTCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTGGC‑GGTCCAAAAGCCa                                                                                                                                                                                                    <  1:1133416/225‑1 (MQ=255)
                                             ttcATTCTATACCCACTATCCCGCAACGCTAATTGCCCGCTATGGCACGTTACCAGTCGTCGGCTGGAGTATGCTGATTGGC‑GGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGTCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTGGC‑GGTCCAAAAGCCa                                                                                                                                                                                                    <  2:101749/237‑1 (MQ=255)
                                                      taCCACCTATCCCTCAACGCTAATTGCCCGCTATGGCACGTTACCAGTCGTCGGCTGGAGTATGCTGATTGGC‑GGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTATGGCGGTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACAATTAGTCTTT‑ACCTGC‑AAAGAGCACA‑ATTAATTGGC‑GGTCCAAAAACCacccatttta                                                                                                                                                                                           >  2:153019/1‑230 (MQ=255)
                                                       tcccccTAACCCTCAACGTTAATTGCCCGCTATGGCACCGTACCAGGCGTCGGCTGGAGTATGCTGATTGGC‑GGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGTCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTGGC‑GGTCCAAAAGCCAGCATTTTGAg                                                                                                                                                                                          <  2:380006/235‑1 (MQ=255)
                                                       cccccctttcccctaaccgtAATTGCCCGCTGTGGCACGTTACCAGTCGTCGGCTGGAGTATGCTGATTGGC‑GGTCTGATTCTGTTGGCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGTCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTGGC‑GGTCCAAAAGCCAGCATTTTGAg                                                                                                                                                                                          <  1:287159/220‑1 (MQ=255)
                                                       ccccccTAGCCCTAAACGCTAATTGCCCGCTATGGCACGTTACCAGTCGTCGGCTGGAGTATGCTGATTGGC‑GGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGTCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTGGC‑GGTCCAAAAGCCAGCATTTTGAg                                                                                                                                                                                          <  2:101617/235‑1 (MQ=255)
                                                       agctacTATCCCGAAACGGTAATTGCCCGCTATGGCACGTTACCGGTCGTCGGCTGGAGTATGCTGATTGGC‑GGTTTGATTCTGTTGCCGTTTGATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGTCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTGGC‑GGTCCAAAAGCCAGCATTTTGAg                                                                                                                                                                                          <  2:1255735/234‑1 (MQ=255)
                                                         caccTATCCCTCAACGCTAATTGCCCGCTATGGCACGTTACCAGTCGTCGGCTGGAGTATGCTGATTGGC‑GGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGGTTCTGGCGGTTTTTTATTT‑GGGGGTCATTGGGACGTCCCTGAAATTTAGTCTTT‑ACCTGA‑AAGGAGCACA‑CTTAATTGGC‑GGGCCAAAAACCCGCATTTTGAGCt                                                                                                                                                                                        >  2:1202735/1‑239 (MQ=255)
                                                          cccTTTCCCTCACCGCTAATTGCCCGGTATGGCACGTTACCAGTCGTCTGCTGGAGTATGCTGATTGGC‑GGTCTGATTCTGTTTCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTT‑GGGGGTCATTGGTACGTCCCTGACATTTAGTCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTGGC‑GGTCCAAAAGCCAGCATTTTGAGCtg                                                                                                                                                                                       <  1:125589/238‑1 (MQ=255)
                                                           ccTATCCCTCAACGCTAATTGCCCGCTATGGCACGTTACCAGTCGTCGGCTGGAGTATGCTGATTGGC‑GGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGGTTTTGGGGTTTTTTTATTT‑GGGGGTCATTGGTACGTCCCTTACATTTTGTCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTGGC‑GGTCCAAAAGCCAGCATTTTTAGCtgt                                                                                                                                                                                      >  2:1127373/1‑239 (MQ=255)
                                                           ccTATCCCTCAACGCTAATTGCCCGCTATGGCACGTTACCAGTCGTCGGCTGGAGTATGCTGATTGGC‑GGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTTTGGCGTTTTTTTATTT‑GGTGGGCATTGGTACGTCCCTGACCTTTAGGCTTT‑ACCTGA‑AAAGAGCCCC‑ATTAATTTGC‑GGGCCAAAAGCCCGGATTTTTGGCtgt                                                                                                                                                                                      >  2:952991/1‑239 (MQ=255)
                                                            cttacccTTAACTCTTATTGCCCGCTATGGCACGTTACCAGTCGTCGGCTGGAGTATGCTGATTGGC‑GGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGTCTGT‑ACCTTA‑AAGGAGCACA‑ATTAATTGGC‑GGTCCAAAAGCCAGCATTTTGAGCtgtg                                                                                                                                                                                     <  2:896126/235‑1 (MQ=255)
                                                            cTATCCCTCAACGCTAATTGCCCGCTATGGCACGTTACCAGTCGTCGGCTGGAGTATGCTGATTGGC‑GGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGGTTGATTCTGGCGGTTTTTTATTT‑GGTGGTTATTGGTACGTCCCTGGCATTTTGTCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTGGA‑GTGCCAAAAGCCACCAATTTGacagttg                                                                                                                                                                                     >  2:176483/1‑233 (MQ=255)
                                                              aTCCCTCAACGCTAATTGCCCGCTATGGCACGTTCCCAGTCGTCGGCTGGAGTATGCTGATTGGC‑GGTCTGATTCTTTTGCCTTTTTATGCCAGCCAAGGAAAAAA‑CTTTGTCGTTAACGGCAGTTTGTTTCTGGGTGTTATTTATTT‑GGTGGGTCTTGGGACGGCCCTGGCCTTTTGTCCTG‑ACCTGT‑AAGGAGGCCA‑ACTAACAGTT‑GGTCCCAAAAGCAACAATTTTAGCtgtgag                                                                                                                                                                                   >  1:1025014/1‑237 (MQ=255)
                                                              aTCCCTCAACGCTAATTGCCCGCTATGGCACGTTACCAGTCGTCGGCTGGCGTATGCTGATTGGC‑GGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCTTGGGTTTTTTTATTT‑TGGGGTCATTGGTACGTCCCTTGCATTTTAGCTTT‑TCCTGT‑AAGGAACACA‑ATTAATTGGG‑GGTCCAAAAACCCGCCTTTTGAACTGTG‑cc                                                                                                                                                                                  >  2:527666/1‑238 (MQ=255)
                                                              aTCCCTCAACGCTAATTGCCCGCTATGGCACGTTACCAGTCGTCGGCTGGAGTATGCTGATTGGC‑GGTCTGATTCCGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTTTCGTTAATGGCAGTTTGGTTCTGGCGTTTTTTTATTT‑GGTGTGCCTTGTTCCGTTCCTGCAATTTAGTCTGT‑CCCTGA‑AAGGGACACA‑CATATATTGT‑GGTCCAAAAGCCACCAtttttgaccttggc                                                                                                                                                                                   >  2:356421/1‑229 (MQ=255)
                                                               tCCCTCAACGCTAATTGCCCGTTATGGCACGTTCCCAGTCGTCGGCTGGAGTATGCTGATTGGC‑GGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCTTGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGTCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTGGC‑GGTCCAAAAGCCAGCATTTTGAGCTGTG‑CAg                                                                                                                                                                                 <  2:26857/239‑1 (MQ=255)
                                                               tCCCTCAACGCTAATTGCCCGCTATGGCACGGTACCAGTCGTCGGCTGGAGTATGCTGATTGGC‑GGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGTCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTGGC‑GGTCCAAAAGCCAGCATTTTGAGCTGTG‑CAg                                                                                                                                                                                 <  2:1025014/239‑1 (MQ=255)
                                                               tCCCTCAACGATAATTGCCCGCTATGGCACGTTACCAGTCGTCGGCTGGAGTATGCTGATTGGC‑GGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGTCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTGGC‑GGTCCAAAAGCCAGCATTTTGAGCTGTG‑CAg                                                                                                                                                                                 <  2:553253/239‑1 (MQ=255)
                                                                     aaCGCTAATTGCCCGCTATGGCACGTTACCAGTCGTCGGCTGGAGTATGCTGATTGGC‑GGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCCGTTTGCTTCTGGCGTTTTTTTATTT‑TGTTGTACTTGGTACGTCCCTTACCTTTTGGCTGT‑TCACTC‑AAGGAGCGCC‑ATTAATTGGC‑GGTCCAAAAACCAGCATTTTGGCCTGTG‑CAGTACCAt                                                                                                                                                                           >  2:434760/1‑239 (MQ=255)
                                                                          tAATTGCCCGCTATGGCACGTTTCCAGTCGTCGGCTGGAGTATGCTGATTGGC‑GGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGTCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTGGC‑GGTCCAAAAGCCAGCATTTTGAGCTGTG‑CAGAACCATTAAg                                                                                                                                                                       <  2:213900/238‑1 (MQ=255)
                                                                            aTTGCCCGCTATGGCACGTTACCAGTCGTCGGCTGGAGTATGCTGATTGGC‑GGTCTTATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑ATTTGTCGTTAACGGCAGGTTGGTTCTGGCGGTTTTTTATTT‑GGAGGGCATTGGTACGTACCCTACATTTAGTCTGT‑ACCCTG‑AAGGAGCACC‑ATTGAATTTC‑GGTCCAAAAACCAGCATTTTTAGCTGTG‑CAAAACCCTTAAGTa                                                                                                                                                                     >  2:778043/1‑238 (MQ=255)
                                                                            aTTGCCCGCTATGGCACGTTACCAGTCGTCGGCTGGAGTATGCTGATTGGC‑GGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTT‑GGTGGGCATTGGTACGTCCCTGACATTTAGTCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTTGC‑GGGGCCAAAACCAGCATTTTTAGCTTTG‑CAGAACCATTaaatga                                                                                                                                                                    >  2:64331/1‑235 (MQ=255)
                                                                              tGCCCGCTATGGCACGTTACCAGTCGTCGGCTGGAGTATGCTGATTGGC‑GGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGTCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTGGC‑GGTCCAAAAGCCAGCATTTTGAGCTGTG‑CAg                                                                                                                                                                                 <  2:212652/224‑1 (MQ=255)
                                                                                  cGCTATGGCACGTTACCAGTCGTCGGCTGGAGTATGCTGATTGGC‑GGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGTCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTGGC‑GGTCCAAAAGCCAGCATTTTGAGCTGCG‑CAGAACCATTAAGTAGCGCGCt                                                                                                                                                              <  2:1030181/239‑1 (MQ=255)
                                                                                    cTATGGCACGTTACCAGTCGTCGGCTGGAGTATGCTGATTGGC‑GGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGTCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTGGC‑GGTCCAAAAGCCAGCATTTTGAGCTGTG‑CAGAACCATTAAGTAGCGCGCTAc                                                                                                                                                            <  2:20464/239‑1 (MQ=255)
                                                                                        ggCACGTTACCAGTCGTCGGCTGGAGTATGCTGATTGGC‑GGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCCGTTTTTTTTTGGCGTTTTTTTTTTTGGGTGGTCTTTGGAACCTCCTTG‑CATTTGGTTTGT‑ACATGT‑AAGGGGCACACTTTATTTGGG‑TGTCCAAAA‑CCCGCAATTTTAGTCGTG‑CAAAAcacataaagctgacccttataaa                                                                                                                                                        >  1:212652/1‑217 (MQ=255)
                                                                                           aCGTTACCAGTCGGCGGCTGGAGTATGCTGATTGGC‑GGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGTCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTGGC‑GGTCCAAAAGCCAGCATTTTGAGCTGTG‑CAGAACCATTAAGTAGCGCGCTAC‑TCTCtt                                                                                                                                                     <  2:494555/238‑1 (MQ=255)
                                                                                               tccccgttgtcgGCTGGAGTATGTTGATTGGG‑GTTCTGGTTCTGTTGCTGTTTTATTCCAGACAAGGAACAAA‑CTTTGTCGGTAACGGCCGTTTGATTCTGGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGTCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTGGC‑GGTCCAAAAGCCAGCATTTTGAGCTGTG‑CAGAACCATTAAGTAGCGCGCTAC‑TCTCTttgctg                                                                                                                                                <  1:962340/231‑1 (MQ=255)
                                                                                               tACCAGTCGTCGGCTGGAGTATGCTGATTGGC‑GGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTT‑TGGGGTCATTGGTACGTCCCTGTCCTTTAGTCTGT‑ACCTGA‑AAGGAGCACC‑ATTAATTTGC‑GGTCCCAAAGCCAAACTTTTTCACTGTC‑CAGAACCATTTAgaacgccgttcatctcttttctt                                                                                                                                                 >  2:1205838/1‑217 (MQ=255)
                                                                                               tACCAGTCGTCGGCTGGAGTATGCTGATTGGC‑GGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGTCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTGGC‑GGTCCAAAAGCCAGCATTTTGAg                                                                                                                                                                                          >  2:1286198/1‑199 (MQ=255)
                                                                                               tACCAGTCGTCGGCTGGAGTATGCTGATTGGC‑GGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGTCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTGGC‑GGTCCAAAAGCCAGCATTTTGAg                                                                                                                                                                                          <  1:1286198/199‑1 (MQ=255)
                                                                                               tACCAGTCGTCGGCTGGAGTATGCTGATTGGC‑GGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGTCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTGGC‑GGTCCAAAAGCCAGCATTTTGAGCTGTG‑CAGAACCATTAAGTAGCGCGCTAC‑TCTCTttgct                                                                                                                                                 <  2:1102658/238‑1 (MQ=255)
                                                                                               tACCAGTCGTCGGCTGGAGTATGCTGATTGGC‑GGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGGCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTTGTCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTGGC‑GGTCCACAAGCCAGCAATTTGGTCTGTG‑AAGAAACATTAAGTatagcggcccacgctttggtg                                                                                                                                                 >  2:1020604/1‑219 (MQ=255)
                                                                                                       gtcgGCTGGAGTATGCTGATTGGC‑GGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGGTTGATTCTTGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGTCTGT‑CCCTGA‑AATGAGCACC‑ATTAATTGTG‑GGTCAAAAAGCCCTCATTTTTAGCTTTG‑CGAGACCCTTAAATGGCCCGTGCT‑TCTCTTTGCT‑TTGCTtggg                                                                                                                                       >  2:1058558/1‑239 (MQ=255)
                                                                                                         cgGCTGGAGTATGCTGATTGGG‑GGTCTGATTCTGTTGCCTTTTTAGGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGTCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTGGC‑GGTCCAAAAGCCAGCATTTTGAGCTGTG‑CAGAACCATTAAGTAGCGCGCTAC‑TCTCTTTGCTGTTGCTGGGGa                                                                                                                                      <  2:476888/239‑1 (MQ=255)
                                                                                                              ggatgttgtcgtgtGGC‑GGTCGGATTCTTGTGTCTTTTTATGCCAGTCAAGGAACGTA‑CTTTGGCATTAATGGGAGTGTGATATGGGCGTTTGTTTATTT‑GGAGGTCATTGGGACGTCCCTTACAGTTAGTCTGG‑ACCTGA‑AAGGAGGACA‑ATTAATGGGC‑GGTACAAAAGCCATCATTTTGAGCTGTG‑CAGAACCATTAAGTATCGCGCTAC‑TCGCTTTGCTGTTGCTGGGGATC‑ACg                                                                                                                                <  1:1061717/226‑1 (MQ=255)
                                                                                                              ggAGTATGCTTGTTTGC‑GGTTTTTTTCTTTGTCTTTTTTATGCCAGTCAAGGATAAAC‑CTTTGTCGTTAACGGCAGTTTGATTCTGGAGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTTACATTTAGTCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTGGC‑GGTCCAAAAGCCAGCATTTTGAGCTGTG‑CAGAACCATTAAGTAGCGCGCTAC‑TCTCTTTGCTGTTGCTGGGGATC‑ACg                                                                                                                                <  1:527666/239‑1 (MQ=255)
                                                                                                               gAGTATGCTGATTGGC‑GGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGTCTGT‑ACCTGA‑AAGGAGca                                                                                                                                                                                                                               <  2:841928/148‑1 (MQ=255)
                                                                                                               gAGTATGCTGATTGGC‑GGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGTCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTGGC‑GGTCCAAAAGCCAGCATTTTGAg                                                                                                                                                                                          >  2:538061/1‑183 (MQ=255)
                                                                                                               gAGTATGCTGATTGGC‑GGTCTGACTCTATTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGGTTTATTTTTGGGCTTTTTTTTTT‑TGTGGTCCTTGGTACGCGCCCGACATTTTTTCTGT‑TCCTTATAAGGAGCAC‑‑ATTAATTCGCGGGTCCAAAA‑CCCGCATTTTGTTGTGAGCCGGAACCATTAA‑TGGGGCGCCAC‑CGCCTTTTCTGTTGTTgggggagccat                                                                                                                                >  1:523306/1‑232 (MQ=255)
                                                                                                                 gTATGATGATTGGC‑GGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGTCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTGGC‑GGTCCAAAAGCCAGCATTTTGAGCTGTG‑CAGAACCATTAAGTAGCGCGCTAC‑TCTCTTTGCTGTTGCTGGGGATC‑ACGtt                                                                                                                              <  2:516285/238‑1 (MQ=255)
                                                                                                                   atgttttttGGG‑GGTGTTATTCTGTTGCATTTTTTTTCCATATAAGGAACAAA‑TCTTGGCGTTAACGGCAGTTTGGTTCGTGCGTTTTTTTATTT‑GTGGGGCATTTGTACGGCCCTGACATTTAGTCGGT‑ACCTGA‑AAGGAGCACA‑ATTAATTGGC‑GGTCCAAAAGCCAGCATTTTGAGCTGTG‑CAGAACCATTAAGTAGAGCGCTAC‑TCTCTTTGCTGTTGCTGGGGATC‑TCGTTct                                                                                                                            <  1:278765/231‑2 (MQ=255)
                                                                                                                   aTGCTGATTGGC‑GGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGTCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTGGC‑GGTCCAAAAGCCAGCATTTTGAGCTGTG‑CAGAACCATTAAGTAGCGCGCTAC‑TCTCTTTGCTGTTGCTGGGGATC‑ACGTTca                                                                                                                            <  2:518404/238‑1 (MQ=255)
                                                                                                                   aTGCTGATTGGC‑GGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGTCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTGGC‑GGTCCAAAAGCCAGCATTTTGAGCTGTG‑CAGAACCATTAAGTAGCGCGCTAC‑TCTCTTTGCTGTTGCTGGGGATC‑ACGTTca                                                                                                                            <  2:861566/238‑1 (MQ=255)
                                                                                                                    tGCTGATTGGC‑GGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGTCTGT‑Ac                                                                                                                                                                                                                                            <  1:1287193/131‑1 (MQ=255)
                                                                                                                         aTTGGC‑GGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGTCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTGGC‑GGTCCa                                                                                                                                                                                                           <  2:401548/156‑1 (MQ=255)
                                                                                                                          ttGGC‑GGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTTATTTTGGGGTTTTTTTATTT‑GGTTGTCACTTGTACGTCCCTGACATTTAGTCTGG‑TCCTTA‑AAGGAGAACA‑ATTTATTTGC‑GGTCCCAAAACCCGCATTTTTCGCTGTG‑CAGTACCCATTAGTAACGCGCTAC‑TCCCCTTGCTTGTGCTtgggggacaagtccaaataaag                                                                                                                     >  1:167352/1‑221 (MQ=255)
                                                                                                                            ggC‑GGTCTGATGCTGTTGCCTTGTTATGCCAGAAAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGTCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTGGC‑GGTCCAAAAGCCAGCATTTTGAGCTGTG‑CAGAACCATTAAGTAGCGCGCTAC‑TCTCTTTGCTGTTGCTGGGGATC‑ACGTTCACATTACCGGa                                                                                                                  <  2:331881/239‑1 (MQ=255)
                                                                                                                             tggtgtttgtttcttgtGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCGGGGGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGTCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTGGC‑GGTCCAAAAGCCAGCATTTTGAGCTGTG‑CAGAACCATTAAGTAGCGCGCTAC‑TCTCTTTGCTGTTGCTGGGGATC‑ACGTTCACATTACCGGa                                                                                                                  <  1:184474/223‑1 (MQ=255)
                                                                                                                             tgcgtttttaTTGTGTTGTTTTTTTTTTCAAGACAAGGAAAAAA‑TGTTGTCTTTACCGGCAGTTTTATTCTGGAGTTTTTTTATTT‑GGTGGTCATTGGTTCGTCCCTGACATTTAGTCTGT‑ACCTGA‑AAGGACCACA‑ATTAATTGGC‑GGTCCAAAAGCCAGCATTTTGAGCTGTG‑CAGAGCCATTAAGTAGCGCGCTAC‑TCTCTTTGCTGTTGCTGGGGATC‑ACGTTCACATTACCGGa                                                                                                                  <  1:153019/230‑1 (MQ=255)
                                                                                                                              c‑GGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTTATTCTGGCGTTTTTTTATTT‑TGTGGTCATTGGTACGTCCCTGACATTTAGTCTGT‑ACCTGA‑AAGGAGCCCA‑ATTAATTTGC‑GGTCCCAAAACCAGCATTTTGTGCTTTG‑CAGAACCATTAAGTAGCCCGCTAA‑CTTCTTTGCTTTTGCTGGGGATC‑ACGTTCACATTAcccg                                                                                                                   >  2:664132/1‑234 (MQ=255)
                                                                                                                              c‑GGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGTCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTGGC‑GGTCCAAAAGCCAGCCTTTTTAGCTGTG‑CAGAACCATTAAGTAGCGGGCTAC‑CCTCTTTGCTGTTTCTGGGGATC‑ACCTTCACATTACCggcac                                                                                                                >  2:334200/1‑236 (MQ=255)
                                                                                                                                  tCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCCGGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGTCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTGGC‑GGTCCAAAAGCCAGCATTTTGAGCTGTG‑CAGAACCATTAAGTAGCGCGCTAC‑TCTCTTTGCTGTTGCTGGGGATC‑ACGTTca                                                                                                                            <  2:1242721/224‑1 (MQ=255)
                                                                                                                                        ttttttGCCTTTTTATGCCACACAAGGAACAAA‑TTTTGTCGTTAACGGCAGTTTGATTCTGGCTTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGTCTAT‑ACCTGA‑AAGGAGCACA‑ATTAATTGGC‑GGTCCAAAAGCCAGCATTTTGAGCTGTG‑CAGAACCATTAAGTAGCGCGCTAC‑TCTCTTTGCTGTTGCTGGGGATC‑ACGTTCACATTACCGGACTGGCTGGGaa                                                                                                       <  1:1202735/235‑1 (MQ=255)
                                                                                                                                            ttGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGTCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTGGC‑GGTCCAAAAGCCAGCATTTTGAGCTGTG‑CAGAACCAtt                                                                                                                                                                          >  2:268409/1‑170 (MQ=255)
                                                                                                                                            ttGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGTCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTGGC‑GGTCCAAAAGCCAGCATTTTGAGCTGTG‑CAGAACCAtt                                                                                                                                                                          <  1:268409/170‑1 (MQ=255)
                                                                                                                                            ttGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGTCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTGGC‑GGTCCAAAAGCCAGCATTTTGAGCTGTG‑CAGAACCATTAAGTAGCGCGCTAC‑TCTCTTTGCTGTTGCTGGGGATC‑CCGTTCCCATTACCGGCCTGGCTGGGAAccc                                                                                                    >  2:607824/1‑236 (MQ=255)
                                                                                                                                            ttGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGTCTCT‑ACCTGA‑AAGGAGCACA‑ATTAATTGGC‑GGTCCCAAAGCCAGCATTTTGAGCTGTG‑CAGAACCATTAAGTATCGCGCTAC‑TCTCTTTGCTGTTTCTGGGGATC‑ACGTTCACATTACCCGACTGGCTGGGacc                                                                                                      >  2:519008/1‑234 (MQ=255)
                                                                                                                                            gtGCCTTTTTATGCCAGAGAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTTATTCTGGCGTTTTTTTATAT‑GGTGGTCATTGGGACGTCCCTGACCTTTAGTCTCT‑ACCTGA‑AAGAAGCACA‑GTTAATTGGT‑GGTCCGAAAGCCCGCATTTTTAGCACTG‑CGGAACCATTAAGTAGCGTGCTAA‑CCTCTTTGCTGTTGCCGGGGGAC‑GCGTTTCCATTACCggcccaggcttttatac                                                                                                    >  1:1242721/2‑223 (MQ=255)
                                                                                                                                              gCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTT‑GGGGGTCATTGGTACGTCCCTGACATTTAGTCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTGGC‑GGTCCAAAAACCAACATTTTGAGCTGTG‑GAGGAACCTTTAGTAGCGCGATCC‑TCCCTTTGCTGTTTTTGGGGCGC‑ACGTTTCCAATACCgagcctgttctttataaaca                                                                                                 >  1:683313/1‑220 (MQ=255)
                                                                                                                                                  ttttATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGTCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTGGC‑GGTCCAAAAGCCAGCATTTTGAGCTGTG‑CAg                                                                                                                                                                                 <  2:606166/157‑1 (MQ=255)
                                                                                                                                                      aTGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCATTACATTTAGTCTGT‑ACCTTA‑AAGGAGAACA‑ATTAATTGGC‑GGTCCCACATCCCACACTTTGAGCTGTG‑ACGACACATTAAGTAGCGCGCTAA‑TCCCCTTGCTCTTGCTGGGGATC‑ACGTTTACATAACCGGAATCGGTGGGAACgctgcctatttta                                                                                         >  1:219883/1‑231 (MQ=255)
                                                                                                                                                      aTGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTA‑GGTAGTTATTTGTACGTCCCTGGCATTTTAGGTTT‑GACTGT‑CAGGGGCACA‑ATTAATTGGC‑GGTCCACAAACCAGCATTTTTAGCTGCG‑CAGAACCATTAAGTAGAGCCCTACATCACTTTG‑TTCTGTCGGGGATCAACGTCCACA‑TACCGCCCTGGCTGTGacacgcgtctgagtac                                                                                         >  1:833639/1‑224 (MQ=255)
                                                                                                                                                                    aCAAA‑TTTTGTCGTTAACGGTGGTTGTATTCTGGCGTGTTTTTAGTT‑GGGTGGAATTGGTACGGCCCTGACATTGAGTCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTGGC‑GGTCCAAAAGCCAGCATTTTGAGCTGTG‑CAGAACCATTAAGTAGCGCGCTAC‑TCTCTTTGCTGTTGCTGGGGATC‑ACGTTCACATTGCCGGACTGGCTGGGAACGCTGCTGATTCTGTCATCGGtgatttt                                                                           <  1:39314/239‑1 (MQ=255)
                                                                                                                                                                            ttGTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGTCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTGGC‑GGTCCAAAAGCCAGCATTTTGAGCTTGG‑CAGAACCATTAAGTAGCGCGCTAC‑TCCCTTTGCTGTTGCTGGGGTGC‑ACGTTCCCATTACCGGACTGGCTGGGAACGATGCTAATTTCGTCATCGGTGATTTTGATTTCa                                                                    >  2:1152460/1‑239 (MQ=255)
                                                                                                                                                                              gTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGTCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTTGC‑GGTCCAAAAGCCAGCATTTTTATCTGTG‑CAGAACCATTAAGTAGCGCGCAAC‑TCTCTTTGCTGTTGTTGGGGATC‑ACGTTCACATTTCCGACCCGGCCGGGGAACCTTCTGATTCTGTCATAGGgggttttttttttaaa                                                                  >  1:949252/1‑230 (MQ=255)
                                                                                                                                                                                                    tGGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGTCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTGGC‑GGTCCAAAAGCCAGCATTTTGAGCTGTG‑CAGAACCATTAAGTAGCGCGCTAC‑TCTCTTTGCTGTTGCTGGGGATC‑ACGTTCACATTACCGGACTGGCTGGGAACGCGGCTGATTCTGTCATCGGTGATTTTGATTTCCATGGTTTCCCGCCCCCCCGCCGGa                                            >  2:974406/1‑239 (MQ=255)
                                                                                                                                                                                                      gCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGTCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTGGC‑GGTCCAAAAGCCAGCATTTTGAGCTGTG‑CAGAACCATTAAGTAGCGCGCTAC‑TCTCTTTGCTGTTGCTGGGGATC‑ACGTTCACATTACCGGACTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCGGaaa                                          >  2:1121314/1‑239 (MQ=255)
                                                                                                                                                                                                                  agacagggtCATTGGTACGTCCCTGACATTTAGTCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTGGC‑GGTCCAAAAGCCAGCATTTTGAGCTGTG‑CAGAACCATTAAGTAGCGCGCTAC‑TCTCTTTGCTGTTGCTGGGGATC‑ACGTTCACATTACCGGACTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTc                               <  2:1241253/233‑1 (MQ=255)
                                                                                                                                                                                                                        ggtTATTGGTTCGTCCCTTACATTTAGTCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTGGC‑GGTCCAAAAGCCAGCATTTTGAGCTGTG‑CAGAACCATTAAGTAGCGCGCTAC‑TCTCTTTGCTGTTGCTGGGGATC‑ACGTTCACATTACCGGACTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGgcg                          <  2:1075236/238‑1 (MQ=255)
                                                                                                                                                                                                                        ggtCATTGGTACGTCCCGGACATTTAGGCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTGGC‑GGTCCAAAAGCCAGCATTTTGAGCTGTG‑CAGAACCATTAAGTAGCCCGCTAC‑TCTCTTTGCTGTTGCTGGGGATC‑ACGTTCACATTACCGGACTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGgcg                          <  2:827360/238‑1 (MQ=255)
                                                                                                                                                                                                                           tttttgTACGGCCCTGACTTTTAGTCTGT‑ACCTGA‑AAAGAGCACA‑ATTAATTGGG‑GGTCCAAAAGGCAGGATTTTGGGCCGTG‑CAGAACCATTAAGTAGCGGGCTAC‑TCTCTTTGCTGTTGCTGGGGATC‑ACGTTCACATTACCGGACTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGc                      <  1:1001551/234‑1 (MQ=255)
                                                                                                                                                                                                                                gTACGTCCCTGACATTTAGTCTGT‑ACCTGA‑AAGGAGca                                                                                                                                                                                                                               <  1:123752/38‑1 (MQ=255)
                                                                                                                                                                                                                                 tACGTCCCTGACATTTAGTCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTGGC‑GGTCCAAAAGCCAGCATTTTGAGCTGTG‑CAGAACCATTAAGTAGCGCGCTAC‑TCTCTTTGCTGTTGCTGGGGATC‑ACGTTCACATTACCGGACTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGCTTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGt                >  2:827079/1‑239 (MQ=255)
                                                                                                                                                                                                                                        cTGCCATTTAGTCTGT‑ACCTGA‑AAGGGACACA‑ATTAATTGGC‑GGTCCAAAAGCCAGCATTTTGAGCTGTG‑CAGAACCATTAAGTAGCGCGCTAC‑TCTCTTTGCTGTTGCTGGGGATC‑ACGTTCACATTACCGGACTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAAtt         <  2:1147050/239‑1 (MQ=255)
                                                                                                                                                                                                                                        cTGACATTTAGTCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTGGC‑GGTCCAAAAGCCAGCATTTTGAGCTGTG‑CAGAACCATTAAGTAGCGCGCTAC‑TCTCTTTGCTGTTGCTGGGGATC‑ACGTTCACATTACCGGACTGGCTGGGAACGCTGCTGATTCTGTCGTCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCCCCAGAAAAATAAATCGTCCGGCGCGGCTTAAGTGAGAAta         >  1:250973/1‑238 (MQ=255)
                                                                                                                                                                                                                                          ttcttttAGTTTGT‑TCCGGA‑AGGGGGAACA‑ATTAATGGGC‑GGGCCAAAAGCCAGCATTTTGAGCTGTG‑CAGAACCATTAAGTAGCGCGCTAC‑TCTCTTTGCTGTTGCTGGGGATC‑ACGTTCACATTACCGGACTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTAc       <  1:664132/235‑1 (MQ=255)
                                                                                                                                                                                                                                          gcaaTTTTGGCTTT‑ACCTAA‑ACGGAGAAAA‑ATTAATGGTC‑CTTACAAAAGGCAGACTGTTGAGGTGTG‑CACAACCATTAAGTAGCGCGTTAC‑TCTCTGGGGTGTTGCTGGTTATC‑CAGTTCAAATTCCCGGACGGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATGTCAATGGATTCCCGGCGCAGCGCCAGAAAAATAAATCGTCCGGCGCGGAATAAGTGAGAATTAc       <  1:770725/236‑1 (MQ=255)
                                                                                                                                                                                                                                           aCATTTAGTCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTGGC‑GGTCCAAAAGCCGGCATTTTGAGCTGTG‑CAGAACCATTAAGTAGCGCGCTa                                                                                                                                                             >  2:363996/1‑90 (MQ=255)
                                                                                                                                                                                                                                               ttAGTCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTGGC‑GGTCCAAAAGCCAGCATTTTGAGCTGTG‑CAGAACCATTAAGTAGCGCGCTAC‑TCTCTTTGCTGTTGCTGGGGATC‑ACGTTCACATTACCGGACTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTAccagcc  >  2:686269/1‑239 (MQ=255)
                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                   
CTCTCCTGCCGCGTTGTTCTGGGGCATTGCCTCGGCATTTGCTGCTGCATTCTATACCACCTATCCCTCAACGCTAATTGCCCGCTATGGCACGTTACCAGTCGTCGGCTGGAGTATGCTGATTGGC‑GGTCTGATTCTGTTGCCTTTTTATGCCAGACAAGGAACAAA‑CTTTGTCGTTAACGGCAGTTTGATTCTGGCGTTTTTTTATTT‑GGTGGTCATTGGTACGTCCCTGACATTTAGTCTGT‑ACCTGA‑AAGGAGCACA‑ATTAATTGGC‑GGTCCAAAAGCCAGCATTTTGAGCTGTG‑CAGAACCATTAAGTAGCGCGCTAC‑TCTCTTTGCTGTTGCTGGGGATC‑ACGTTCACATTACCGGACTGGCTGGGAACGCTGCTGATTCTGTCATCGGTGATTTTGATTTCAATGGATTCCCGTCGCCGCGCCAGAAAAATAAATCGTCCGGCGCGGCATAAGTGAGAATTACCAGCC  >  NC_000913/3838708‑3839182

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑