| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,043,013 | A→G | 15.6% | G200G (GGA→GGG) | srkA → | Cpx stress response Thr/Ser protein kinase, MazF antagonist protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,043,013 | 0 | A | G | 15.6% | 133.5 / 2.8 | 62 | G200G (GGA→GGG) | srkA | Cpx stress response Thr/Ser protein kinase, MazF antagonist protein |
| Reads supporting (aligned to +/- strand): ref base A (11/40); new base G (8/3); total (19/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.01e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TGGAAGCGGTTGGGCGTTATTTAGGGCGTATGCACCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCC‑GGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGA‑TTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCG‑TTCTGCGGCTACATGGAGACTG‑CCACGCCGGGAATA‑TTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGTTTGGTTTA > NC_000913/4042778‑4043240 | tGGAAGGGGTTGGGCTTTTTTTAGGGCCTAGGCCCCAGTCGGGGCGTAAACAGCTTTTTATCCATCGCCCGACCATCGTTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATCCCTTCC‑GGTTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGA‑TTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCG‑TTCTGCGGCTACATGga < 2:681179/236‑1 (MQ=255) ggAAGCGGTTGGGCGTTATTTAGGGCGTATGCACCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCC‑GGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGA‑TTGCCGCCGTTACAGCCACCTGGCGGGGCGAATTGACCG‑ATCTGTGGCGACATGgagcc > 2:533778/1‑236 (MQ=255) ttGGGCGTTATTTAGGGCGTAGTCACCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACAGTCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGGGGACGCTACACTGATCCCTTCC‑GGGTGGAAAGCGGAATTCTTGAAAGCGACAGATGAGCTGA‑TTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCG‑TTCTGCGGCTACATGGAGACTG‑CCACGc < 2:698977/238‑1 (MQ=255) ggCGTATGCACCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCC‑GGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGA‑TTGCCGCCGTTACAGCACACTGGCGGGAAGATTTAAACG‑ATTTCGGGGTACATGGGGAAAGCCCACGCGGGGAAAA‑TT‑TCTgg > 2:896039/1‑239 (MQ=255) cGTATGCACCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCC‑GGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGA‑TTGCCGCCGTTCCAGACCACTGGCGGGGAGAATTCACCGCTTTTGCGCCCACATGGGTACTC‑CCACCCCGGGAATA‑‑TCTCTGgcc > 2:472750/1‑238 (MQ=255) ttgggccAGACGGGGCACAAACAGCTTTTTATCCAGCGCCCGACCATCGGTTTGAACGAATATCTCATTGGGCCACGCAAGCTTTTTGAGGACGCTACACGGATCCCTTCC‑GGTTTGAAAGCGGCATTCCGGAAAGCGACAGATGAGCTGA‑TTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCG‑TTCTGCGGCTACATGGAGACTG‑CCACGCCGGGAATA‑TTCTCTGGCGCGa < 2:322661/234‑1 (MQ=255) aTGCCCCAGACGGGGCGAAAACAGCTTTTTATCCATCGCCCGACCTTCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCC‑GGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGA‑TTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCG‑TTCTGCGGCTACATGGAGACTG‑CCACGCCGGGAATA‑TTCTCTGGCGCGa < 2:885422/239‑1 (MQ=255) aTGCACCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCC‑GGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGA‑TTGCCGCCGTTACAGCACACTGGCGGGAAGGATTTACCG‑TTCTCCGGGCTCACGGGGACTC‑ACCAGCCGGGGATA‑TTTTTTGGcgcgc > 2:11976/1‑238 (MQ=255) aTGCACCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCC‑GGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGA‑TTGCCGCCGTTACAGCACACTGGCGGGAAGATTTTACCC‑TTTTGCGGCTCCATGGAGAATG‑CCACACCGGGGATA‑TTCTCTGGcgcgc > 2:932623/1‑238 (MQ=255) aTGCACCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCC‑GGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGA‑TTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCC‑TTTTGCGGCTACAATGAGGCTG‑GCACGCCggggaaaatttcttggccca > 2:319140/1‑222 (MQ=255) aTGCACCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCC‑GGGTTGAAAGCGGCATTCCTGAAAGCGAAAGATGAGCTGA‑TTGCCGCCGTTACAGCACACTGGCGGGGAGATTTTACCC‑TTCTTCGGCCACGGTGAGACTG‑GCCCGCCCGGGAAA‑TTttctttgcgcg > 2:222477/1‑232 (MQ=255) tGCACCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCC‑GGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGA‑TTGCCGCCGTTACAGCACACTGGCGGGAAGATTTTACCC‑GTCTTCGGCTCCCAGAGGACTG‑CCACGCCGGGGAAA‑TTTCCTTGcgcggt > 2:423764/1‑237 (MQ=255) cAGGCGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGGCCCACGCAAGCTGTTTGAGGACGCTACACTGATCCCTTCC‑GGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGA‑TTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCG‑TTCTGCGGCTACATGGAGACTG‑CCACGCCGGGAATA‑TTCTCTGGCGCGATGGTcc < 2:204958/239‑1 (MQ=255) ggagggggCGCAAACAGGTTTTTAACCAGCGCCCGACCACCGGTTTGAACGAAATTCTCATTGAGCCACGCAAGCGGGTTGGGGACGCTACACTGATACCTTCC‑GGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGA‑TTGCCGCCGTTACAGCACACTGGCGGGAAGAGTTCACCG‑TTCTGCGGCTACATGGAGACTG‑CCACGCCGGGAATA‑TTCTCTGGCGCGATGGTCCa < 2:521089/235‑1 (MQ=255) aCGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCC‑GGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGA‑TTGCCGCCGTTACAGCACACTGGCGGGGAGATTTTCCCG‑TTCTGCGGCCACCTGGGGACTG‑CCACCCCGGGGATA‑TTTTCTCGCGCGCTGGTGCAAt > 2:203049/1‑239 (MQ=255) aCGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCC‑GGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGA‑TTGCCGCCGTTACAGCACACTGGCGGGAAGATTTTACCG‑TTCTGCGGGTCCCTGGAGAATG‑CCACCCCGGGAATATTTCTTTGGC‑CGATGGTccc > 2:347430/1‑236 (MQ=255) aCGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCC‑GGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGA‑TTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCG‑TTCTGCGGCTACATGAGGAATG‑CCACGCCGGGAAAA‑TTTTCTGTGGCGATGGGCCaaa > 2:937689/1‑238 (MQ=255) cGGGGCGCAAACAGTTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCC‑GGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGA‑TTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCG‑TTCTGCGGCTACATGGAGACTG‑CCACGCCGGGAATA‑TTCTCTGGCGCGATGGTCCa < 2:92236/236‑1 (MQ=255) ggCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCC‑GGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGA‑TTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCG‑TTCTGCGGGTACATGGGGACTG‑CCCCGCCGGGGGAA‑TTTTCTgggggcggggtccaaacttt > 2:937422/1‑221 (MQ=255) cgaaaaCCGCTTTTTATCCATCCCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGAAAGCTGTTTGAGGACGCTACACTGATACCTTCC‑GGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGA‑TTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCG‑TTCTGCGGCTACATGGAGACTG‑CCACGCCGGGAATA‑TTCTCTGGCGCGATGGTCCAAtgtttg < 2:1075338/235‑1 (MQ=255) acccACCGCCCGATCATGGGTTTGAACGAATTTCTCATTGGCCCACGCAAGCTGTTTGAGGACGCTCACCTGATACCTTCC‑GGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGA‑TTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCG‑TTCTGCGGCTACATGGAGACTG‑CCACGCCGGGAATA‑TTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGc < 2:329414/237‑1 (MQ=255) gccATCGCCCGGACATGGGTTGGAACGAATATCTCATTGGGCCACGCAAGCTGTTTGAGGCCGCTACACTGATACCTTCC‑GGGTTGAAAGCGGAATTCCTGAAAGCGACAGATGAGCTGA‑TTGCCGGCGTTACAGCACACTGGCGGGAAGATTTCACCG‑TTCTGCGGCTACATGGAGACTG‑CCACGCCGGGAATA‑TTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCa < 2:391890/238‑1 (MQ=255) ccATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCC‑GGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGA‑TTGCCGCCGTTACAGCACACTGGCGGGAAGGTTTCACAC‑TTTTGCGGGCCCATTGGGACTG‑CACCCCCGGGGAGA‑ATTTCTTGCGCGCTGGGCCAAAGGATGTGTATATGgatggggggc > 1:617568/1‑233 (MQ=255) cctcgtccatgtgtttttaccGAATTTCTTATGGGGCCACCCATGCTTTTTGAGACCGCTCAACTGGCCCCTTCC‑GGGTGGAAGGGGGCATTCCGAAAAGCAACAGAGGCGGTTA‑TTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCG‑TTCTGCGGCTACATGGAGACTG‑CCACGCCGGGAATA‑TTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTaa < 1:98769/219‑1 (MQ=255) ccATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACCCTACCCTGATACCTTCC‑GGGTTGAAAGCGGCATTCCGAAAAGCGACAGATGAGCTGA‑TTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCG‑TTCTGCGGCTACATGGAGACTG‑CCACGCCGGGAATA‑TTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCa < 2:904240/239‑1 (MQ=255) gTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCC‑GGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGA‑TTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCG‑TTCTGCGGCTACATGGAGACTG‑c < 2:1115563/164‑1 (MQ=255) tatCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCC‑GGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGA‑TTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCG‑TTCTGCGGCTACATGGAGACTG‑CCCCCCCGGGGATA‑TTCTCTGGCGCGATGGTCCAATGTTTTTTTATCTGGGTGATGCACGTAATGGTCCCGCCGCTCCGGATTtttg > 2:10385/1‑239 (MQ=255) ctcATTGAGCCACGCAAGGTGTTGGAGGTCGCTTCACTGATCCCTGCC‑GGTTTGAAAGCGGCATTCCTGAAAGCGACAGATGATCTGA‑TTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCG‑TTCTGCGGCTACATGGAGACTG‑CCACGCCGGGAATA‑TTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGC‑CGTAATGGTCCAGCCGTTCAGGATTTGTGGATg < 2:295568/239‑1 (MQ=255) ctattgaccccgccacgCTTTTTGAGGACCTTACACGTATCCCTCCC‑GGGTTGAAGGCGGCTTTCCTGAAAGCGACAGATGAGGTGT‑TTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCCCCG‑TTCTGCGGCTACATGGAGACTG‑CCACGCCGGGAATA‑TTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATg < 1:937689/223‑1 (MQ=255) ccagcacgttGTTTGAGGACGCAACGAGTATTCTGTCG‑GGGTGAAAAGCGGCATCCCTGAAAGCGAAGGGTGAGGTGA‑TTGCCGCCGTTACAGCCCACTGGCGGGAAGATTTCACCG‑TTCTGCGGCTACATGGAGACTG‑CCACGCCGGGAATA‑TTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAAt < 1:423764/230‑1 (MQ=255) gaggcaccTACGCTGATCCCTCCG‑GGGTTGAAAGGGGCATTCCTGAAAGCGACAGATGAGCTGA‑TTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCG‑TTCTGCGGCTACATGGAGACTG‑CCACGCCGGGAATA‑TTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGa < 2:213640/232‑1 (MQ=255) aCGCTGCACTGATTCCTTCC‑GGGTTGAAAGCGGCATCCGTGAAAGCGACAGATGGGCTGA‑TTGCCGCCGTTACAGCACCCTGGCGGGAAGATTTCACCG‑TTCTGCGGCTACATGGAGACTG‑CCACGCCGGGAATA‑TTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGagca < 2:374131/238‑1 (MQ=255) gttaaccttatcccTTCG‑GGGTTGAAAGCGGCATTCCTGAAAGCAAAAGATGAGCTGT‑TTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCG‑TTCTGCGGCTACATGGAGACTG‑CCACGCCGGGAATA‑TTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGagcagc < 2:862001/226‑1 (MQ=255) cacTGATCCCTTCG‑GGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGA‑TTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCG‑TTCTGCGGCTACATGGAGACTG‑CCACGCCGGGAATA‑TTCTCTGGCGCGATGGTCCAAt < 2:1183006/151‑1 (MQ=255) ttccTTCCGGGGTTTAACGCGGCTTTCTAGAAAGCGAAGGTGGAGTTGA‑TCGCCGCCGTTACAGCCCACGGGCGGGATGATTTCACCG‑TTCTGCGGCTACATGGAGATTG‑CCACGCCGGGAATA‑TTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACt < 1:1201197/237‑1 (MQ=255) ccTTCG‑GGGTTGAAAGCGGTATTCCGGAAAGCGACAGATGAGCTGA‑TTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCG‑TTCTGCGGCTACATGGAGACTG‑CCACGCCGGGAATA‑TTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGa < 2:380811/239‑1 (MQ=255) ccTTCG‑GGGGTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGA‑GTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCG‑TTCCGCGGCTACATGGAGACTG‑CCACGCCGGGAATA‑TTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGa < 2:75887/239‑1 (MQ=255) ccTTCC‑GGGTTGAAGGCGGCATTCCTGAAAGCGACAATTGGGCTGA‑TTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCG‑TTCTGCGGCTACATGGAGACTG‑CCACGCCGGGAATA‑TTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGa < 2:617568/239‑1 (MQ=255) ccTTCC‑GGGTTGAAAGCGGCATTCCTGAAAACGGAGGTGGAGGTAA‑TTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCG‑TTCTGCGGCTACATGGAGACTT‑CCACTCCGGGAATA‑TTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGa < 2:922686/239‑1 (MQ=255) ccTTCC‑GGGTTAAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGA‑TTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCG‑TTCTGCGGCTACATGGAGACTG‑CCACGCCGGGAATA‑TTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGa < 2:1138842/239‑1 (MQ=255) cctgcggtgTTGAAAGCGTCATTCCTGAAAGCGACAGATGAGCTGA‑TTGCCGCCGTTACAGCACGCTGGCGGGAAGATTTCACCG‑TTCTGCGGCTACATGGAGACTG‑CCACGCCGGGAATA‑TTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGa < 2:415429/231‑1 (MQ=255) ggTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGA‑TTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCG‑TTCTTCGGCTACATTGAGACTG‑CCACGCCGGGGATA‑TTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGGCCAGCCGGTCAGGATTTGTGGGTGTTGCTCAATGGCGGTAAAACCCGGCAGCGGGTGCAAcctgtaactttt > 2:491441/1‑228 (MQ=255) acaaGCGGACTTGCTGAAAGCGACAGAGGGGGTGA‑TTGCCGCCTTTACAGCCCACTGGCGGGAAGATTTCACCG‑TTCTGCGGCTACATGGAGGCTG‑CCACGCCGGGAATA‑TTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGAAACTATTATTg < 2:916980/237‑1 (MQ=255) aaaGCGGCATTCCTGAAAGCGACAGATGAGCTGA‑TTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCG‑TTCTGCGGCTACATGGAGACTG‑CCACGCCGGGGATA‑TTCTCTGGCGCGATGGTCCAATGTTTTTTGATCTGGGTGATGCACGGAATGGTCCAGCCGTTCAGGATTTTTGGATGTTGCTCAATGGGGATAAAACCGGGCAGCGGGTGCacttgttcttttacccat > 2:262021/1‑221 (MQ=255) aggCGGCATTCCTGAACGCGACAGA‑CTGGTGATTTGCGTGAGTTACAGCACACTGGCGGGAAGAGTTCCCCG‑TTCTGGGGGTACATGGAGTCTG‑CCACGCCGGGAATT‑TTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGTTGATGCACGTAATGGTACAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGAAACTATTATTGa < 2:456430/236‑1 (MQ=255) aaGGGGCATTCCTGAAAGGGAAAGATGAGCTGA‑TTGGCCACGTTACAGCACACTGGCAGGAAGATTTCCCCG‑GTCTGCGGCTACATGGATACTG‑CCACGCCGGGAATA‑TTCTCTGGCGCGATGGTCCAATGTTTGTTGATCGGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGAAACTATTATTGa < 2:781535/238‑1 (MQ=255) cATTCCTGAAAGCGACAGATGAGCTGA‑TTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCG‑TTCTGCGGCTACATGGAGACTG‑CCACGCCGGGAATA‑TTCTCTGGCGCGATGGGCCAATGTTTGTTGGTCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGGTTTGTGGGTGTTGGTCAATTGCGGTAAAGCCGAGCAGCGGGTGCAACTGGGAACTATTATTTAAGGTTAt > 2:843735/1‑239 (MQ=255) cATTCCTGAAAGCGACAGATGAGCTGA‑TTGCCGCCGTTACAGCACACTGGCGGGAAGAATTTACCG‑TTCTGCGGGCACATGGAGAATG‑CCACGCCGGGGATA‑TTTTCTGGCGCGGGGGTCCCATGGTTGTTGATCTGGATGTGGCACGGAATGGTCCAGCCGTTTCGGATTTTTGGTGTTTTGTCAAATGCGATAAGACGGAGCGGCGGGTGCAACGGGgaaaaaataatgtagcgaat > 1:1235730/1‑222 (MQ=255) gACAGATGAGCTAA‑TTGCCGGCGGTACAGCACCCTGGCGGGAAGATTTCACCG‑TTCTTGGGCTACAGGGATACTG‑ACACGCCGGGAATA‑TTCTTTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGc < 2:1292083/238‑1 (MQ=255) acatgcgtcgttgttGCCGCCTTTACCGCACACGGGCGGGAAGTGTTCACCG‑TTCTGGGGCTACAGGGGGACTG‑CCACGTCGGGATTA‑TTCTCTGGCGTGTTTGGCCAATGTTTGTTGATCTGTATGATGCACGTAATGGTCCAGCCGTTCAGTATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGc < 1:533778/224‑1 (MQ=255) ggCTGA‑TTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCG‑TTCTGCGGCTACATGGAGACTG‑CCACGCCGGGAATA‑TTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGa < 2:1235730/237‑1 (MQ=255) a‑TTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCG‑TTTTGCGGCTACATGGAGACTG‑CCACGCCGGGAATA‑TTCTCTTGCGCGATGGGCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGGTTTTTGGGTGTTGCTCCATGGCGATAAAACCGGGCAGCGGGGGCAACTTGGAACATTTATTTAAACTTTTTAAGAAttttagaggttgtgaaccc > 2:1198153/1‑222 (MQ=255) tttGCCGCCGTTACAGCACAGTGGCGGGAAGATTGTCCGG‑TTCTCGGGCTGCAGGGAGACTG‑CCACGTCGGGAATA‑GTCTCTGGCGGGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGc < 1:347430/238‑1 (MQ=255) gtttccggtgTTAAAGAACCCTGGGGTAAAGAGTTCGACG‑TTGTGCGTGTCCACGGAGACCT‑TCCCGCAGGGAATA‑CTTTATGGCGCTATGTTCCAATGTTTGTTGAGCGGGATGATGCACGTAATGGCCCATCCGGTCAGGATTTTTGGATGTTGCTTAATGGCGATAAAGACGAGCAGTGGATGCAACTGGAAACCATTCTTGAAGTTTATGAAGAATTTAGCGAGTTCGACACCGc < 1:1071178/230‑1 (MQ=255) cgTTAGAGCACACTGGCGGGAAGATTTCACCG‑TTCTGCGGCTACATGGAGACTG‑CCACGCCGGGAATA‑TTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGga < 2:1074621/105‑1 (MQ=255) gtaccacacaCGTGCGGGGAGATTGCTCCG‑TGCTGCGGCTATGTGGGGATCG‑CCCAGACGTGAATT‑GTCTCTGTCGCTAGGGGCAAATGTTTGGTGGTCTGGATGGTGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACGGGAAACTATTATTGAAGCATATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGa < 1:1212630/233‑1 (MQ=255) tacatgccacTGGGGGGAAATTTTCCCCT‑TTTGGCGGCTACATGGGGTCTG‑CCCCGCCGGGAATA‑TTCTCGGGCGCGATGGTCCAATTGTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGa < 1:11488/231‑1 (MQ=255) aTTTCACCG‑TTCTGCGGCTACATGGAGACTG‑CCACGCCGGGAATA‑TTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGGGcc > 2:423918/1‑239 (MQ=255) tttCACCG‑TTCTGCGGCTACATGGAGACTG‑CCACGCCGGGAATA‑TTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCa < 2:493587/239‑1 (MQ=255) cG‑TTCTGCGGCTACATGGAGACTG‑CCACGCCGGGAATA‑TTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGtt < 2:166554/239‑1 (MQ=255) cG‑TTCGGCGTCTACATGGAGCCTG‑CCCCGCCGGGAATA‑TTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGtt < 2:1272441/239‑1 (MQ=255) cG‑TTCGGCGGCTACATGGATACTG‑CCACGCCGGGAATA‑TTCCCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGtt < 2:454294/239‑1 (MQ=255) g‑TTCTGCGGCTACATGGAGACTG‑CCACGGCGGGAATA‑TTCTCTGGCCCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGttt < 2:964339/239‑1 (MQ=255) ggCTACATGGAGACTG‑CCACGCCGGGAATA‑TTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGTTTGGTtta < 2:828132/238‑1 (MQ=255) | TGGAAGCGGTTGGGCGTTATTTAGGGCGTATGCACCAGACGGGGCGCAAACAGCTTTTTATCCATCGCCCGACCATCGGTTTGAACGAATATCTCATTGAGCCACGCAAGCTGTTTGAGGACGCTACACTGATACCTTCC‑GGGTTGAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGA‑TTGCCGCCGTTACAGCACACTGGCGGGAAGATTTCACCG‑TTCTGCGGCTACATGGAGACTG‑CCACGCCGGGAATA‑TTCTCTGGCGCGATGGTCCAATGTTTGTTGATCTGGATGATGCACGTAATGGTCCAGCCGTTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCCGAGCAGCGGATGCAACTGGAAACTATTATTGAAGCTTATGAAGAATTTAGCGAGTTCGACACCGCTGAAATCGGACTGATTGAACCTTTACGCGCCATGCGTTTGGTTTA > NC_000913/4042778‑4043240 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |