Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 4,099,982 G→C 9.9% C181W (TGC→TGG)  rhaT ← L‑rhamnose:proton symporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,099,9820GC 9.9% 237.1 / 2.2 103C181W (TGC→TGG) rhaTL‑rhamnose:proton symporter
Reads supporting (aligned to +/- strand):  ref base G (69/19);  new base C (2/9);  total (72/31)
Fisher's exact test for biased strand distribution p-value = 1.44e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.24e-01

Only 100 of 104 total aligned reads displayed.

AACACATTGTGAATGATCAGCGATTTTGCCAGCGAGAAGTCGGCTTTTAGCGACAAATCCTTCACTTTTGCCAGACGAATAAAACAGAAACCGAGGTT‑AATGATCGCGCCGCCGCCCATGATGACAACATAGCTTGGCAGAGCGACATACAGT‑GGATCGACGCCAAGTGCGGCAGCGG‑CT‑TCATGCAT‑CGGTTTTGCGGCGTTCATCGCAAAGGACA‑TCCCGGCAGAG‑AAA‑ATG‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAAC‑GTCATGCGTCCGCCTTCGGTGCTAATCAACACATCGAAATTGCCGTTGATAATTGGCGTCATCAGCGTACCGAC‑AATCAACGTAATGCCAATGGCGATGCCAATTC  >  NC_000913/4099746‑4100220
                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                  
aaCACATTGTGAATGATCAGCGATTTTGCCAGCGAGAAGTCGGCTTTTAGCGACAAATCCTTCACTTTTGCCAGACGAATAAAACAGAAACCGAGGTT‑AATGATCGCGCCGCCGCCCATGATGACAACATAGCTTGGCAGAGCGACATACAGT‑GGATCGACGCCAAGTGCGGCAGCGG‑CT‑TCATGCAT‑CGGTTTTGCGGCGTTCATCGCAAAGGACA‑TCCCGGCCGAG‑AAA‑ATG‑CCGca                                                                                                                                                                                                                                                  >  2:1293561/1‑239 (MQ=255)
  cacaTTGTGAATGATCAGCGATTTTGCCAGCGAGAAGTCGGCTTTTAGCGACAAATCCTTCACTTTTGCCAGACGAATAAAACAGAAACCGAGGTT‑AATGATCGCGCCGCCGCCCATGATGACAACATAGCTTGGCAGAGCGACATACAGT‑GGATCGACGCCAAGTGCGGCAGCGG‑CT‑TCATGCAT‑CGGTTTTGCGGCGTTCATCGCAAAGGACA‑TCCCGGCAGAG‑AAA‑ATG‑CCGcac‑a                                                                                                                                                                                                                                               >  2:394580/1‑239 (MQ=255)
    caTTGTGAATGATCAGCGATTTTGCCAGCGAGAAGTCGGCTTTTAGCGACAAATCCTTCACTTTTGCCAGACGAATAAAACAGAAACCGAGGTT‑AATGATCGCGCCGCCGCCCATGATGACAACATAGCTTGGCAGAGAGACATACAGT‑GGATCGACGCCAAGTGCGGCAGCGG‑CT‑TCATGCAT‑CGGTTTTGCGGCGTTCATCGCAGAGGATA‑TCCCGGAAGAG‑AAA‑TTG‑CACCAC‑ATc                                                                                                                                                                                                                                             >  2:273719/1‑239 (MQ=255)
       tgtgAATGATCAGCGATTTTGCCAGCGAGAAGTCGGCTTTTAGCGACAAATCCTTCACTTTTGCCAGACGAATAAAACAGAAACCGAGGTT‑AATGATCGCGCCGCCGCCCATGATGACAACATAGCTTGGCAGAGCGACATACAGT‑GGATCGACGCCAAGTGCGGCAGCGG‑CT‑TCATGCAT‑CGGTTTTGCGGCGTTCATCGCAAAGGCCA‑TCCCGGCGGAG‑AAA‑ATG‑CCGCAC‑ATCAc                                                                                                                                                                                                                                           >  2:1139231/1‑238 (MQ=255)
       tgtgAATGATCAGCGATTTTGCCAGCGAGAAGTCGGCTTTTAGCGACAAATCCTTCACTTTTGCCAGACGAATAAAACAGAAACCGAGGTT‑AATGATCGCGCCGCCGCCCATGATGACAACATAGCTTGGCAGAGCGACATACAGT‑GGATCGACGCCAAGTGCGGCAGCGG‑CT‑TCATGCAT‑CGGTTTTGCGGCGTTCATCGCAAAGGACA‑TCCCGGCCGAG‑AAA‑ATG‑CCGCAC‑ATCAc                                                                                                                                                                                                                                           >  2:1108235/1‑238 (MQ=255)
       tgtgAATGATCAGCGATTTTGCCAGCGAGAAGTCGGCTTTTAGCGACAAATCCTTCACTTTTGCCAGACGAATAAAACAGAAACCGAGGTT‑AATGATCGCGCCGCCGCCCATGATGACAACATAGCTTGGCAGAGCGACATACAGT‑GGATCGACGCCAAGTGCGGCAGCGG‑CT‑TCATGCAT‑CGGTTTTGCGGCGTTCATCGCAAAGGACA‑TCCCGGCAGAG‑AAA‑ATG‑CCGCAC‑ATCAc                                                                                                                                                                                                                                           >  2:538387/1‑238 (MQ=255)
       tgtgAATGATCAGCGATTTTGCCAGCGAGAAGTCGGCTTTTAGCGACAAATCCTTCACTTTTGCCAGACGAATAAAACAGAAACCGAGGTT‑AATGATCGCGCCGCCGCCCATGATGACAACATAGCTTGGCAGAGCGACATACAGT‑GGATCGACGCCAAGTGCGGCAGCGG‑CT‑TCATGCAT‑CGGTTTTGCGGCGTTCATCGCAAAGGACA‑TCCCGGCAGAG‑AAA‑ATG‑CCGCAC‑ATCAc                                                                                                                                                                                                                                           >  2:27278/1‑238 (MQ=255)
       tgtgAATGATCAGCGATTTTGCCAGCGAGAAGTCGGCTTTTAGCGACAAATCCTTCACTTTTGCCAGACGAATAAAACAGAAACCGAGGTT‑AATGATCGCGCCGCCGCCCATGATGACAACATAGCTTGGCAGAGCGACATACAGT‑GGATCGACGCCAAGTGCGGCAGCAG‑CT‑TCATGCAT‑CGGTTTTGCGGCGTTCATCGCAAAGAACA‑TCCCGGCAGAG‑AAA‑ATG‑CCGCAC‑ATCAc                                                                                                                                                                                                                                           >  2:189397/1‑238 (MQ=255)
         tgAATGATCAGCGATTTTGCCAGCGAGAAGTCGGCTTTTAGCGACAAATCCTTCACTTTTGCCAGACGAATAAAACAGAAACCGAGGTT‑AATGATCGCGCCGCCGCCCATGATGACAACATAGCTTGGCAGAGCGACATACAGT‑GGATCGACGCCAAGTGCGGCAGCGG‑CT‑TCATGCAT‑CGGTTTTGCGGCGTTCATCGCAAAGGACA‑TCCCGGCAGAG‑AAA‑ATG‑CCGCAC‑ATCACCg                                                                                                                                                                                                                                         >  2:280704/1‑238 (MQ=255)
         tgAATGATCAGCGATTTTGCCAGCGAGAAGTCGGCTTTTAGCGACAAATCCTTCACTTTTGCCAGACGAATAAAACAGAAACCGAGGTT‑AATGATCGCGCCGCCGCCCATGATGACAAAATAGCTTGGCAGAGCGACATACAGG‑GGATCGACCCCAAGTGCGGCAGCGG‑CT‑TCATGCAT‑CGGTTTTCGGGGGTTCTCTGCAAAGGCCA‑AACCGGCCGGA‑AAA‑AGG‑CCGCAC‑ACCACCGc                                                                                                                                                                                                                                        >  1:854989/1‑239 (MQ=255)
          gattttacAGCGATTTTTCCCGGGAGAAGGCGGTTTTTGGCCACAATGCCTCCCTTTGTGCCAGAGTAATAAAACAGAACCCGGGGTT‑AATGATCGCGCCGCCGCCCATGATGACAACATTGCTTGGAAGAGCAACATAAAGT‑GGATCGACGCCAAGGGCGGAGGCGG‑TT‑TCATGCAT‑CGGTTTTGGGGCGTTCATCGCAAAGGACA‑CCCCGGCAGAG‑AAA‑TTG‑CGGAAC‑ATCACCGcc                                                                                                                                                                                                                                       <  1:995154/232‑1 (MQ=255)
                 cAGCGATTTTGCCAGCGAGAAGTCGGCTTTTAGCGACAAATCCTTCACTTTTGCCAGACGAATAAAACAGAAACCGAGGTT‑ACTGATCGCGCCGCCGCCCATGATGACAACATAGCTTGGCAGAGCGACATACAGT‑GGATCGACGCCAAGTGCGGCACTGG‑CT‑TCATGCCT‑GGGTTTTGCGGGGTTCACCCCAAAGACAA‑ACCCGACGAAG‑AAA‑ATG‑CCGcac‑acaacccacaccccac                                                                                                                                                                                                                                >  1:262723/1‑224 (MQ=255)
                 cAGCGATTTTGCCAGCGAGAAGTCGGCTTTTAGCGACAAATCCTTCACTTTTGCCAGACGAATAAAACAGAAACCGAGGTT‑AATGATCGCGCCGCCGCCCATGATGACAACATAGCTTGGCAGAGCGACATACAGT‑GGATCGACGCCAAGTGCGGCAGCGG‑CT‑TCATGCAT‑CGGTTTTGCGGCGTTCATCGCAAAGGACA‑TCCCGGCAGGG‑AAA‑ATG‑CCGCAC‑ATCACCGCCAG‑CAcc                                                                                                                                                                                                                                >  2:645292/1‑238 (MQ=255)
                   gCGATTTTGCCAGCGAGAAGTCGGCTTTTAGCGACAAATCCTTCACTTTTGCCAGACGAATAAAACAGAAACCGAGGTT‑AATGATCGCGCCGCCGCCCATGATGACAACATAGCTTGGCAGAGCGACATACAGT‑GGATCGACGCCAAGTGCGGCAGCGG‑CT‑TCATGCAT‑CGGTTTTGCGGCGTTCATCGAAAAGGAAA‑TCCCGGCAGAG‑AAA‑ATG‑CCGCAC‑ATCACCGCCAC‑CACCAg                                                                                                                                                                                                                              >  2:969373/1‑238 (MQ=255)
                   gCGATTTTGCCAGCGAGAAGTCGGCTTTTAGCGACAAATCCTTCACTTTTGCCAGACGAATAAAACAGAAACAGAGGTT‑AATGATCGCGCCGCCGCCCATGATGACAACATAGCTTGGCAGAGCGACATACAGT‑GGATCGACGCCAAGTGCGGCAGCGG‑CT‑TCATGCAT‑CGGTTTTGCGGCGTTCATCGCCAAGGACA‑TCACGCCAGGG‑AAA‑ATG‑CCGCCC‑ATCACCGCCAG‑CACCaa                                                                                                                                                                                                                              >  2:811950/1‑237 (MQ=255)
                           gCCAGCGAGAAGTCGGCTTTTAGCGACAAATCCTTCACTTTTGCCAGACGAATAAAACAGAAACCGAGGTT‑AATGATCGCGCCGCCGCCCATGATGACAACATAGCTTGGCAGAGCGACATACAGT‑GGATCGACGCCAAGTGCGGCAGCGG‑CT‑TCATGCCT‑CGGTTTTGCGGCGTTCATCGCAAAGGACA‑TCCCGGCAGAG‑AAA‑ATG‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCttttt                                                                                                                                                                                                                      >  2:1076551/1‑238 (MQ=255)
                              aGCGAGAAGTCGGCTTTTAGCGACAAATCCTTCACTTTTGCCAGACGAATAAAACAGAAACCGAGGTT‑AATGATCGCGCCGCCGCCCATGATGACAACATAGCTTGGCAGAGCGACATACAGT‑GGATCGACGCCAAGTGCGGCAGCGG‑CT‑TCATGCAT‑CGGTTTTGCGGCGTTCATCGCAAAGGACA‑TCCCGGCAGAG‑AAA‑ATG‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAg                                                                                                                                                                                                                  >  2:42569/1‑239 (MQ=255)
                               ccaaaaaGTCGGTTTTTACCGAAAAATCCTTCTTTTTGGCCAGAGAAAAAAAACAAAACCCGGGGTT‑AAGGATGGCGCAGCCGCCCATGAAGACAACATAGCGTGGCAGAGCGAAATACAGG‑GGATCGACCCAAAGGGGGGCAGCGG‑TT‑TAATGCAT‑CGGTTTTGCGGCGTTCCTCGAAAAGGACA‑CCCCGGCAGAG‑AAA‑ATG‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGa                                                                                                                                                                                                                 <  1:538387/234‑1 (MQ=255)
                                        cgttttttACCTACAATTCCTT‑ATTGTGGCCAGGAGAATAAAAAAAAACCCGAGGGA‑AACTACCGCCCCCCCGCCGAGGGGGAAAACAAAGCTTGGAGGAGCACCCTTAAGG‑GGACGGGCGCCAGGTGCGGCGGGGG‑CT‑TCATGCAT‑CGGTTTTGCGGCTTCCACCGCAAAGGCCA‑TCCCGGCAGAG‑AAA‑ATG‑CCGACC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCtt                                                                                                                                                                                                       <  1:27278/235‑1 (MQ=255)
                                                     cAAATCCTTCACTTTTGCCAGACGAATAAAACAGAAACCGAGGTT‑AATGATCGCGCCGCCGCCCATGATGCCAACATAGCTTGGCAGAGCGACATACAGT‑GGATCGACGCCAAGTGCGGCAGCGG‑CT‑TCATGCAT‑CGGTTTTGCGGCGTTCATCGCAAAGGACA‑TCCCGGCAGAG‑AAA‑ATG‑CCGAGC‑ATCACCCCCAG‑CACAACCCCTTTTTTCAGATTTAAACCTTCGGCTTTaaag                                                                                                                                                                                            >  1:506917/1‑236 (MQ=255)
                                                     cAAATCCTTCACTTTTGCCAGACGAATAAAACAGAAACCGAGGTT‑AATGATCGCGCCGCCGCCCATGATGACAACATAGCTTGGCAGAGCGACATACAGT‑GGATCGACGCCAAGTGCGGCAGCGG‑CT‑TCATGCAT‑CGGTTTTGCGGCGTTCATCGCAAAGGACA‑TCCCGGCAGAG‑AAA‑ATG‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATg                                                                                                                                                                                            >  2:307154/1‑238 (MQ=255)
                                                           ttttttttttTCCAGACTAAAAAAACACAACCCTGGGTA‑AATGACCTCGCGGCCGCCCATTGGAAGCACAATGTGTGGCAGGGGGACAGAAGGG‑GGTACGCCGCCAAGTGCGGCGGCGG‑CT‑TCACGCAT‑CGGTTTTGCGGCGTCAACCCCAAAGGACC‑TCCCGGCAGAG‑AAA‑ATG‑CCGCCC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCt                                                                                                                                                                                     <  1:148038/233‑1 (MQ=255)
                                                               aCTTTTGCCAGACGAATAAAACAGAAACCGAGGTT‑AATGATCGCGCCGCCGCCCATGATGACAACATAGCTTGGCAGAGCGACATACAGT‑GGATCGACGCCAAGTGCGGCAGCGG‑CT‑TCATGCAT‑CGGTTTTGCGGCGTTCATCGCAAAGGACA‑TCCCGGCAGAG‑AAA‑ATG‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTCCAAATTGAACTCTTCGGCTTTAATGCCCATCTTgc                                                                                                                                                                                  >  2:806060/1‑238 (MQ=255)
                                                                 ctttccccacagAAAAAAACAAAAACCGGGGTTAAATGACCGCGCCCCCCCCCATGATGAAAAAATCGCTGGGCAGAGCGACAGACGGT‑GGATCCACGACAGGGGCGGCAGCGG‑CT‑TCATGCAT‑CGGTTTTGCGGCTTTCATCGCAAAGGCCC‑CCCCGGAAGAG‑AAA‑ATC‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTgcgc                                                                                                                                                                                <  1:1293561/228‑1 (MQ=255)
                                                                   ttGCCAGCCGAATAAAACAGAAACCGAGGTT‑AATGATCGCGCCGCCGCCCATGATGACAACATAGCTTGGCAGACCGACATACAGT‑GGCACCACGACAAGTGCGGCATCGC‑CT‑TCATCCCT‑CGGTTTTGCGGCGTTCATGGCAAAGGGCG‑TCCCGGCCGAG‑GAC‑ATG‑CCCCAC‑AACACCGCCCGCCACCTACAC‑TTCTTGAGATTGTAATCCTCGGCACTAACACCCATCttaccacc                                                                                                                                                                              >  1:60476/1‑232 (MQ=255)
                                                                    tGCCACACAAAAAAAAAAGAAACCGGGGTT‑AATGAGCGCGCCGCCGCCCATGATGACAACATAGCTTGGCAGAGCGACATACAGT‑GGATCGACGCCAAGTGCGGCAGCGG‑TT‑TCATGCAT‑CGGTTTGGCGGCGTTCATCGCAAAGGACACCCCCGGCAGAG‑AAA‑ATG‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGctct                                                                                                                                                                             <  2:115379/239‑1 (MQ=255)
                                                                          gaaaaTAAAAAAGAACCCGTGTTT‑AATGGCCGCGCCGCCCACCATGATGACAAAATGGGTTGGGAGGGGGA‑AAACGAG‑GAAACCAAACCCAGTGGGGGAGGGGTCT‑TAATACAA‑CGGTTTGGCGGCGTCCATCGCAAAGACCA‑TCCCGGCAGAA‑AAA‑GGG‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCa                                                                                                                                                                         <  1:931385/233‑1 (MQ=255)
                                                                          aCGAATAAAACAGAAACCGAGGTT‑AATGATCGCGCCGCCGCCCATGATGACAACATAGCTTGGCAGAGCGACATACAGT‑GGATCGACGCCAAGTGCGGCAGCGG‑CT‑TCATGCAT‑CGGTTTTGCGGCGTTCATCGCAAAGGACA‑TCCCGGCAGAG‑AAA‑ATG‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAAc                                                                                                                                                                       >  2:229264/1‑238 (MQ=255)
                                                                           cGAATAAAACAGAAACCGAGGTT‑AATGATCGCGCCGCCGCCCATGATGACAACATAGCTTGGCAGAGCGACATACAGT‑GGATCGACGCCAAGTGCGGCAGCGG‑CT‑TCATGCAT‑CGGTTTTGCGGCGTTCATCGCAAAGGACA‑TCCCGGCAGAG‑AAA‑ATG‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCACCTTGCGCCCTTTCACCt                                                                                                                                                                      >  2:1131571/1‑238 (MQ=255)
                                                                                   cccaacaCCGAGGTA‑AATTAACCGCCCGCCCCCCATGAGAACAAAAAGGCTGGGCAGGGCGCACTCAAGT‑GTATCACCCCAAAGTGGGGCCGCGC‑TT‑TCAGCCAC‑GGGTTTTGCGGCTTTCATCCAAAAGGACC‑TCCCGGCAGAA‑AAA‑ATT‑CCCCCT‑CTCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGgcgc                                                                                                                                                             <  1:1294256/233‑1 (MQ=255)
                                                                                       aaaCCGAGGTT‑AATGATCGCGCCGCCGCCCATGATGACAACATAGCTTGGCAGAGCGACATACAGT‑GGATCGACGCCAAGTGCGGCAGCGG‑CT‑TCATGCAT‑CGGTTTTGCGGCGTTCATCGCAAAGGACA‑TCCCGGCAGAG‑AAA‑ATG‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGGCGCGCGt                                                                                                                                                         >  2:42048/1‑239 (MQ=255)
                                                                                                ggtacacgtccccgcccgccccATGATGACAACGTCTCTGCGCAAGGCGAAAT‑CAGTCTGTTCGCCGCCAAGGGCGG‑AGAGG‑GTCTCACGCAC‑CGTTTTGGCGGCCTTCATCCAAAAGGACT‑CCCCGGCAAAG‑AAA‑ATC‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATcc                                                                                                                                                 <  1:983597/220‑1 (MQ=255)
                                                                                                 ttaaggtgcgccCCGCCGCCATGGATGAAAACATAGCTGGGCAGAGCGAAATACAGT‑GGATCGACGCCAAGGGCGGCAGGGG‑CT‑TAATGCAT‑CGGTTTGGCGGCGTTCATCGCAAAGGACA‑TCCCGGCAGAG‑AAA‑ATG‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATcc                                                                                                                                                 <  2:1000491/230‑1 (MQ=255)
                                                                                                          gcgcCGCCGCCCATGATGACAACATAGCTTGGCAGAGCGACATACAGT‑GGATCGACGCCAAGTGCGGCAGCGG‑CT‑TCATGCAT‑CGGTTTTGCGGCGTTCATCGCAACGGACA‑TCCCGGCAGCG‑AAA‑ATG‑CCGCAC‑ATCACCGCCAG‑CCCCAGCCCTTTTTTCAGATTGAACTCTTCGACTTTAATGCCCATCTTGCCCTCTTTCAACTGCCCGCAGCGAGGTACAACACCCACGCAAAt                                                                                                                                       >  1:387347/1‑239 (MQ=255)
                                                                                                          gcgcCGCCGCCCATGATGACAACATAGCTTGGCAGAGCGACATACAGT‑GGATCGACGCCAAGTGCGGCAGCGG‑CT‑TCATGCAT‑CGGTTTTGCGGCGTTCATCGCAAAGGACA‑TCCCGGCAGAG‑AAA‑ATG‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCAACGCCaa                                                                                                                                        >  2:143795/1‑238 (MQ=255)
                                                                                                           cgccgccgcCCATGATGACAACATAGCTTGGCAGAGCGACATACAGT‑GGATCGACGCCAAGTGCGGCAGCGG‑CT‑TCATGCAT‑CGGTTTTGCGGCGTTCATCGCAAAGGACA‑TCCCGGCAGAG‑AAA‑ATG‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAAAGCCCATCTTGCGCTCTTTCAACTGCCCGCCGCGAGTTACAATCCCTACCCCAATc                                                                                                                                      >  2:194532/1‑239 (MQ=255)
                                                                                                                   cccATGATGACAACATAGCTTGGCAGAGCGACATACAGT‑GGATCGACGCCAAGTGCGGCAGCGG‑CT‑TCATGCGT‑CGGTTTTGCGGCGTTCATCGCCAAGGACA‑TCCCGGCGGAG‑AAA‑ATG‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTAAGATTGAAACTTTCGGCTTTAAACCCCGCCTTTCGCCCTTTAAACTGCCCGGCGCCCATTAAAAACCCAACGCCAATAAGCGccgc                                                                                                                              >  1:572671/1‑237 (MQ=255)
                                                                                                                              aacaTAGCTTGGCAGAGCGACATACAGT‑GGATCGACGCCAAGTGCGGCAGCGG‑CT‑TCATGCAT‑CGGTTTTGCGGCGTTCATCGCAAAGGACA‑TCCCGGCAGAG‑AAA‑ATG‑CCGCAC‑ATCACCGCCAG‑CACCAGc                                                                                                                                                                                                                             >  2:349174/1‑133 (MQ=255)
                                                                                                                              aaatacggttGGGAGGGCGACATACAGG‑GGCTCGAACCCAAGTGGGGCAGGGG‑TT‑TAATGCAT‑CGGTTTTGCGGCGTTAATCGCAAAGGACA‑TCCCGGCAGAG‑AAA‑ATG‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGa                                                                                                                   <  2:506917/231‑1 (MQ=255)
                                                                                                                                  tAGCTTGGCAGAGCGACATACAGT‑GGATCGACGCCAAGTGCGGCAGCGG‑CT‑TCATGCAT‑CGGTTTTGCGGCGTTCATCGCAAAGGACA‑TCCCGGCAGAG‑AAA‑ATG‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGGCGCGGGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGACCa                                                                                                                >  2:618093/1‑238 (MQ=255)
                                                                                                                                   aGCTTGGCAGAGCGACATACAGT‑GGATCGACGCCAAGTGCGGCAGCGG‑CT‑TCATGCAT‑CGGTTTTGCGGCGTTCATCGCAAAGGACA‑TCCCGGCAGAG‑AAA‑ATG‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCCCCGGAACGCCGAGCAAc                                                                                                              >  2:758840/1‑239 (MQ=255)
                                                                                                                                   aGCTTGGCAGAGCGACATACAGT‑GGATCGACGCCAAGTGCGGCAGCGG‑CT‑TCATGCAT‑CGGTTTTGCGGCGTTCATCGCAAAGGACA‑TCCCGGCAGAG‑AAA‑ATG‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAAAGCCAAGGAAc                                                                                                              >  2:502562/1‑239 (MQ=255)
                                                                                                                                     cTTGGCAGAGCGACATACAGT‑GGATCGACGCCAAGTGCCGCAGCGG‑CT‑TCATGCAT‑CGGTTTTGCGGCGTCCATCGCCAAGGACA‑TCCCGGCAGAG‑AAA‑ATG‑CCGCAC‑ATCACCGCCAG‑CACCTGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTAAACTGCCCGGCGCGAGTTACAATCCCTACCCCAATCAGGACCAACAGACCGCCGCACAAcac                                                                                                            >  1:476864/1‑237 (MQ=255)
                                                                                                                                       tGGCAGAGCGACATACAGT‑GGATCGACGCCAAGTGCGGCAGCGG‑CT‑TCATGCAT‑CGGTTTTGCGGCGTTCATCGCAAAGGACA‑TCCCGGCAGAG‑AAA‑ATG‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGGCGCGGGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGGGCAAC‑GTCa                                                                                                         >  2:765164/1‑239 (MQ=255)
                                                                                                                                        ggCAGGGCGACATACAGT‑GGATCGACCCAAGGTGCGGCAGCGG‑CT‑TCAGGCAT‑CGGTTTTGCGGCTTTCATCCCAAAGGACC‑TCCCGGCAGAG‑AAA‑ATG‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAAC‑GTCAt                                                                                                        <  2:262723/239‑1 (MQ=255)
                                                                                                                                        ggCAGAGCGACATACAGT‑GGATCGGCGCCAAGGGCGGCAGCGG‑CT‑TCATGCAT‑CGGTTTTGCGGCGTTCATCGCAACGGAAA‑TCCCGGCAGAG‑AAA‑ATG‑CCGCAA‑ATACCCGCCAG‑CACCACCCCCTTTTTCAGATTGGACTCTTCCGCTTTAATACCCCTCTTGCGCCCTTTCAACTCACCGGCCCGAGTTACAACCCCCCCGCACATCACCCCCACCAAAACGCCgcgaaaggcaac                                                                                                         >  1:939632/1‑228 (MQ=255)
                                                                                                                                        ggCAGAGCGACATACAGT‑GGATCGACGCCCAGTGCGGCAGCGG‑CT‑TCATGAAT‑CGGTTTGGCGGCGTTCATCGCAAAGGACA‑TTCCGGCAGAG‑AAA‑ATG‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGTCTTTAATGCCCCTCTTGCGCTCTTTCAACTGCCCGCCGCGCCTTCCAATCCTTCCCCCAATTATCCCCTCCAGAACCCCgcctaacttct                                                                                                          >  1:791993/1‑228 (MQ=255)
                                                                                                                                        ggCAGAGCGACATACAGT‑GGATCGACGCCAAGTGCGGCAGCGG‑CT‑TCATGCAT‑CGGTTTTGCGGCGTTCATCGCAACGGACA‑TCCCGGCAGAG‑AAA‑ATT‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCTTTATTCAGATTGAACTATTCGGCTTTAATGCCCATCTTCCGCTCTTTCAACTGCCCGGCGCGGGTTACAACCCCTACCCCAACCAACGCCACACAAACGCCGGGCaaagctat                                                                                                         >  1:916284/1‑233 (MQ=255)
                                                                                                                                        ggCAGAGCGACATACAGT‑GGATCGACGCCAAGTGCGGCAGCGG‑CT‑TCATGCAT‑CGGTTTTGCGGCGTTCATCGCAAAGGACA‑TCCCGGCAGAG‑AAA‑ATG‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTCCCATCCCTACGCCAATCAGCGCCTGCAGCACGCCGAGCAAC‑gc                                                                                                           >  2:667140/1‑235 (MQ=255)
                                                                                                                                        ggCAGAGCGACATACAGT‑GGATCGACGCCAAGTGCGGCAGCGG‑CT‑TCATGCAT‑CGGTTTTGCGGCGTTCATCGCAAAGGACA‑TCCCGGCAGAG‑AAA‑ATG‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCACTCAGCGCCACCAGAACGCCCAGCAAC‑GTCa                                                                                                         >  2:1170597/1‑238 (MQ=255)
                                                                                                                                          cAGAGCGACATACAGT‑GGATCGACGCCAAGTGCGGCAGCGG‑CT‑TCATGCAT‑CGGTTTTGCGGCGTTCATCGCAAAGGACA‑TCCCGGCAGAG‑AAA‑ATG‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTCCAATCCCTACGCCAACCAGCGCCACCAGAACGCCGCGCAAC‑GCCATGc                                                                                                      >  2:341929/1‑239 (MQ=255)
                                                                                                                                            ccgacgtatttaggtgtactgACGCCAGGTGCGGCGGCGC‑CT‑CACTGCGT‑CGTTTTTGCGAGTTGCACGCCAAAGGACA‑‑CCCGGGAGAA‑AAATAGC‑CCACAC‑CTCTCCTCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCCCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGACGAGCAAC‑GTCATGCg                                                                                                     <  1:339038/219‑1 (MQ=255)
                                                                                                                                             agCGACATACAGT‑GGATCGACGCCAAGTGCGGCAGCGG‑CT‑TCATGCAT‑CGGTTTTGCGGCGTTCATCGCAAAGGACA‑TCCCGGCAGAG‑AAA‑ATG‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCaa                                                                                                                                                                        >  2:885741/1‑171 (MQ=255)
                                                                                                                                              gcaaaaTACGGG‑GGATCGACGCCAAGTGCGGCAGCGG‑CT‑TCATGCAT‑CGGTTTTGCGGCGTTCATCGAAAAGGACC‑TCCCGGCAGAA‑AAA‑AGG‑CCGCAC‑ATCCCCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAAC‑GTCATGCGTc                                                                                                   <  2:726401/233‑1 (MQ=255)
                                                                                                                                              gagaaaTACGGG‑GGAACGACGCAAAGTGCGGCAGCGG‑TT‑TCATGCAG‑CGGTTTGGCGGCGTTCACCGCAAAGGACA‑TCCCGGCAGAG‑AAA‑ATG‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAAC‑GTCATGCGTc                                                                                                   <  2:926269/233‑1 (MQ=255)
                                                                                                                                               cccgcatcccggcgcacgcccacAAGTGCGGCGGC‑G‑CG‑TTATTCATACGGTTGTGTGGACTCCACCGAAAAGCCCA‑CCCGGGCAGAG‑AAA‑AGC‑CCCCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAAC‑GTCATGCGTcc                                                                                                  <  1:1011928/217‑1 (MQ=255)
                                                                                                                                                   aTACGGG‑GGATCGCAGCAAAGGGCGGACGCGG‑CT‑TAATGCAT‑CGGTTTTGCGGGCTTCATCGAAAAGGACC‑TCCCGGCAGAG‑AAA‑ATG‑CCGCAC‑ATCCCCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAAC‑GTCATGCGTCCGCCtt                                                                                             <  2:536942/239‑1 (MQ=255)
                                                                                                                                                    cttccggtgttcccccccAAGGTCGGCCCCGG‑CT‑TCCGTCAT‑CGGTTTTGCGGGTTCCACCGCAAAGGACC‑CCCCGGCAAAG‑AAA‑AGG‑CCGCCC‑ATCCCCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAAC‑GTCATGCGTCCGCCtt                                                                                             <  1:540043/223‑1 (MQ=255)
                                                                                                                                                       aGT‑GGATCGACGCCAAGTGCGGCAGCGG‑CT‑TCATGCAT‑CGGTTTTGCGGCGTTCATCGCAAAGGACA‑TCCCGGCAGAG‑AAA‑ATG‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAAC‑GGCATg                                                                                                       >  2:675014/1‑225 (MQ=255)
                                                                                                                                                         t‑GGATCGACGCCAAGTGCGGCAGCGG‑CT‑TCATGCAT‑CGGTTTTGCGGCGTTCATCGCAAAGGACA‑TCCCGGCGGAG‑AAA‑ATG‑CCGGCC‑ATCACCGCCAG‑CAACAGCCCTTTTATCAGGTTGAACTCTACGGCTTTAATGCCCATCTTTCGCTCTTTCAACTGCCCGGCGCAAGATACAAAACCTACCCCAATCAGCGACACCAGAACACCGaacaacacaagacatccgccagcagagc                                                                                        >  1:448725/1‑217 (MQ=255)
                                                                                                                                                         t‑GGATCGACGCCAAGTGCGGCAGCGG‑CT‑TCATGCAT‑CGGTTTTGCGGCGTTCATCGCAAAGGACA‑TCCCGGCAGAG‑AAA‑ATG‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGCGCAAC‑GTCATGCGTCCGCCTTCGGTGc                                                                                       >  2:390496/1‑239 (MQ=255)
                                                                                                                                                         t‑GGATCGACGCCAAGTGCGGCAGCGG‑CT‑TCATGCAT‑CGGTTTTGCGGCGTTCATCGCAAAGGACA‑TCCCGGCAGAG‑AAA‑ATG‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAAC‑GTCATCCGTCCGCCTTCgggcc                                                                                       >  2:971288/1‑236 (MQ=255)
                                                                                                                                                         t‑GGATCGACGCCAAGTGCGGCAGCGG‑CT‑TCATGCAT‑CGAGTTTGCGGCGTTCATCGCAAAGGAAA‑TCCCGGCCGAG‑AAA‑ATG‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGATGTAACTCTTCGGCTTTAATGACCAGCTTGCGCTCTTTCAACTGCCCGGCGCGAGCTCTAATACATAAGCCAATCAGCATCACCGGACCGCCGAGaaaacgaaaactcccgccttcgggac                                                                                        >  1:797925/1‑216 (MQ=255)
                                                                                                                                                             aTCGACGCCAAGTGCGGCAGCGG‑CT‑TCATGCAT‑CGGTTTTGCGGCGTTCATCGCAAAGGACA‑TCCCGGCAGAG‑AAA‑ATG‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGGGCAAC‑GTACTGCGTCCCCCTTCGGTGCTaa                                                                                    >  2:795315/1‑239 (MQ=255)
                                                                                                                                                               cGACGCCAATGGCAGCATCGG‑AC‑TGATGCAC‑CGGTTTTGCGGCGTTCATCGCAAAGGACA‑TCCCGGCAGAG‑AAA‑ATG‑CCGAAC‑ATCAACGCCAG‑CACCAGCCCTTTTTTCAAATTGAACCCTTCGGCTTTAATGCCCATCTTGCGCACTTTACACTACCAGAGGCAAGTTTGAATCCCTACACCAATCACCGCCACCAGAACACCGA‑CAACAGTCATggacccacatacggcggaaacc                                                                                  >  1:943810/1‑218 (MQ=255)
                                                                                                                                                               cGACGCCAAGTGCGGCAGCGG‑CT‑TCATGCAT‑CGGTTTTGCGGCGTTCATCGCAAAGGACA‑TCCCGGCAGAG‑AAA‑ATG‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCATCGCCACCCGAACCCCGAGAAAC‑GCCAAGCGCCCGCCTTCGGGGCCaaac                                                                                  >  1:1035260/1‑237 (MQ=255)
                                                                                                                                                               cGACGCCAAGTGCGGCAGCGG‑CT‑TCATGCAT‑CGGTTTTGCGGCGTTCATCGCAAAGGACA‑TCCCGGCAGAG‑AAA‑ATG‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACCCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACACTCCCTCCGCCAATCAGCGCCACCACAACGCCGAGCAAC‑GCCAGGCGTCCGCCTTCGGTGCTAATc                                                                                  >  1:925453/1‑239 (MQ=255)
                                                                                                                                                                 aCGCCAAGTGCGGCAGCGG‑CT‑TCATGCAT‑CGGTTTTGCGGCGTTCATCGCAAAGGACA‑TCCCGGCAGAG‑AAA‑ATG‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAAC‑GTCATGCGTCCGCCTTCGGGGCTAATCa                                                                                 >  2:850191/1‑238 (MQ=255)
                                                                                                                                                                 aCGCCAAGAGCGGCAGCGG‑CT‑TCATGCAT‑CGGTTTTGCGGCGTTCATCGCAAAGGACA‑TCCCGGCAGAG‑ACA‑ATG‑CCTCAC‑ATCACCGCCAG‑CACCCGCCCTTTTTTCAGATCGAACTCTTCGGCTTTACTGCCCCACTTGCACTCTTTTCACTGCCCGGCACCGGTTAAAATCCCTAAGCCAACCAGACCCCACACAACGCCGAGCACC‑ATCAAGCGTCCCGCCTCGGGTCTAAACaa                                                                                >  1:632954/1‑239 (MQ=255)
                                                                                                                                                                      aaGTGCGGCAGCGG‑CT‑TCATGCAT‑CGGTTTTGCGGCGTTCATCGCAAAGGACA‑TCCCGGCAGAG‑AAA‑ATG‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCCGATTGAACTCTTCGGCTTTAAAGCCCATCTTCCGCTCTTTCACCTGCCCGCCCCGGGTTCCAATCCCTACGCACAACAGCGCCACCAGACCCCCGAACAAG‑GTATTGCg‑ccgcccgtcgatccaaaccaacaaca                                                                          >  1:1163705/1‑218 (MQ=255)
                                                                                                                                                                        aattgcgcacgcgctttaaggCAT‑CGGTTTTGCGGCGTCCAGCGCAAAGAACC‑TCCCGGCAGAG‑AAA‑ATG‑CCCCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAAC‑GTCATGCGTCCGCCTTCGGTGCTAATCAACACAt                                                                           <  2:477222/219‑1 (MQ=255)
                                                                                                                                                                                               t‑CGGTTTTGCGGCGTTCATCGCAAAGGACA‑TCCCGGCAGAG‑AAA‑ATG‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAAC‑GTCATGCGTCCGCCTTCGGTGCTAATCAACACATCGAAATTGCCGTTGATAAtttg                                                     >  2:1084418/1‑236 (MQ=255)
                                                                                                                                                                                                 cGGTTTTGCGGCGTTCATCGCAAAGGACA‑TCCCGGCAGAG‑AAA‑ATG‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCCGAACGCCGAGCAAC‑GTCATGCGTCCGCCTTCGGTGCTAATCAAAACACCGAAATTGCCGTTGACAATTGGc                                                    >  1:1070318/1‑238 (MQ=255)
                                                                                                                                                                                                            gccttcacccAAAGGGCA‑CCCCCGCACAAAAAA‑ATG‑CCCCAA‑GCCCCCCCCAG‑GCCCAGCCCTTTTTTCAGATGGACCTCTTCGGTTTTAACGCCCCTCTTGCGCTCTTTCACCTGCCCGGCGCGATTTACAAGCCCTACGCCAATCAGCGCCACCAGAACGCCGGGCAAC‑GTCATGCGTCCGCCTTCGGTGCTAATCAACACATCGAAATTGCCGTTGATAATTGGCGTCATCAGCg                                          <  1:152119/229‑1 (MQ=255)
                                                                                                                                                                                                              ttCATCGCAAAGGACA‑TCCCGGCAGAG‑AAA‑ATG‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCCACTGACCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAAC‑GTCATCCGTCCCCCTTACGTCCTATTAAACCCATCAAAAATCCCGCTTATAATTGCGGccatcacggaacc                                      >  1:969949/1‑232 (MQ=255)
                                                                                                                                                                                                              ttCATCGCAAAGGACA‑TCCCGGCAGAG‑AAA‑ATG‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAAC‑GTCATGCGCCCGCCTTCGGTGCTAATCAACACATCGAAATTGCCGTTGATAATTGGCGTCATCAGCGTAcc                                      >  2:582538/1‑239 (MQ=255)
                                                                                                                                                                                                              ttCATCGCAAAGGACA‑TCCCGGCAGAG‑AAA‑ATG‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAAC‑GCCTTGCGGCCCCCTTCGGTGCTAATCAACACATCCAAATTGCCGTTGTTAATTGGCGCCATCAACGGAcc                                      >  1:94178/1‑239 (MQ=255)
                                                                                                                                                                                                               tCAGCGCAAAGGACC‑CCCCGGCAGAA‑AAA‑AGG‑CCACAA‑CTCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAAC‑GTCATGCGTCCGCCTTCGGTGCTAATCAACACATCGAAATTGCCGTTGATAATTGGCGTCATCAGCGTAcc                                      <  2:1176719/238‑1 (MQ=255)
                                                                                                                                                                                                                   cGCAAAGGACA‑TCCCGGCAGAG‑AAA‑ATG‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGgcg                                                                                                                                                              >  2:152616/1‑115 (MQ=255)
                                                                                                                                                                                                                       ttgggaaaaagagaaaggaaaaa‑aTG‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAAC‑GTCATGCGTCCGCCTTCGGTGCTAATCAACACATCGAAATTGCCGTTGATAATTGGCGTCATCAGCGTACCGAC‑AAt                               <  2:669913/218‑1 (MQ=255)
                                                                                                                                                                                                                        aGGACA‑TCCCGGCAGAG‑AAA‑ATG‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAAC‑GTCATGCGTCCGCCTTCGGTGCTAATCAACACATCGAAATTGCCGTTGATAATTGGCGTCATCAGCGTACCGAC‑AATCAAc                           >  2:72123/1‑239 (MQ=255)
                                                                                                                                                                                                                        aGGACA‑TCCCGGCAGAG‑AAA‑ATG‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAAC‑GTCATGCGTCCGCCTTCGGTGCCAATCAACACACCGAACTTGCCGTTGAACATTGGCGTCATCCACGAACCGaacaacaaa                            >  1:1176719/1‑231 (MQ=255)
                                                                                                                                                                                                                           aCA‑TCCCGGAAAAG‑AAA‑ATG‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAAC‑GTCATGCGTCCGCCTTCGGTGCTAATCAACACATCGAAATTGCCGTTGATAATTGGCGTCATCAGCGTACCGAC‑AATCAACGt                         <  2:94178/238‑1 (MQ=255)
                                                                                                                                                                                                                            gccccccGGCAGGA‑AAA‑ATG‑CC‑CACAATCCCCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAAC‑GTCATGCGTCCGCCTTCGGTGCTAATCAACACATCGAAATTGCCGTTGATAATTGGCGTCATCAGCGTACCGAC‑AATCAACGt                         <  2:484943/234‑1 (MQ=255)
                                                                                                                                                                                                                             ctccccGGCAAAG‑AAC‑AGG‑CCCTAA‑CTCACCGCCAG‑CCCCAGCCCTTTTTTCAGATTGACCTCTTGCGCTTTAATGCCCATCTTGCGCTCGTTCAACTGCCCGGCGCTAGTTACAAGCCCTACGCCAATCAGCGCCCCCAGTACGCCGAGCAAC‑GTCATGCGTCCGCCTTCGGTGCTAATCAACACATCGAAATTGCCGTTGATAATTGGCGTCATTAGCGTACCGCC‑AATCAACGTa                        <  1:1131571/235‑1 (MQ=255)
                                                                                                                                                                                                                             cacccaggCAGAA‑AAA‑AGG‑CCCCAC‑ATCCCCGCCAG‑CCCCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAAC‑GTCATGCGTCCGCCTTCGGTGCTAATCAACACATCGAAATTGCCGTTGATAATTGGCGTCATCAGCGTACCGAC‑AATCAACGt                         <  2:860216/231‑1 (MQ=255)
                                                                                                                                                                                                                             acccccGGCAGAG‑AAA‑ATC‑CCCACC‑ATCCCCTCCAG‑CACCCGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAAC‑GTCATGCGTCCGCCTTCGGTGCTAATCAACACATCGAAATTGCCGTTGATAATTGGCGTCATCAGCGTACCGAC‑AATCAACGt                         <  2:476864/234‑1 (MQ=255)
                                                                                                                                                                                                                             a‑TCCCGGCAGAG‑AAA‑ATG‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAAC‑GTCATGCGTCCGCCTTCGGTGCTAATCAAcaca                                                                            >  2:1283295/1‑186 (MQ=255)
                                                                                                                                                                                                                             a‑TCCCGGCAGAG‑AAA‑ATG‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAAC‑GTCATGCGTCCGCCTTCGGTGCTAATCAACACATCGAAATTGCCGTTGATCATTTGCGTCATCAGCGTCCCGGC‑AATCAACATAAt                      >  1:237691/1‑239 (MQ=255)
                                                                                                                                                                                                                             a‑TCCCGGCAGAG‑AAA‑ATG‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGGCCCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGCGCAAC‑GTCATGCGTCCGCCTTCGGTGCTAATCACCACATCGAAATTGCCGTTGATAATTGGCTGCATAAACGTACCGAC‑AATAAACGTaa                       >  2:707922/1‑238 (MQ=255)
                                                                                                                                                                                                                                cctccgggccaaagacatcgcGCAC‑TCCACCGCCAG‑GCCCAGCCCGTTTTTACGATTGACCCCTTTGGCTTTAATGCCCAACTTGCGCTCTTTCAACTGCCCGGCGCCAGTTACAAGCCCTACGCCAATAAGCGCCAACAGAACGCCGAGGTAC‑GTAATGCGTCCGGCTTCGGTGCTACGCAACCACTCGAAATGGCCGTTGATAATTGGCGTCATCAGCGTACCGAC‑AATCAACGTa                        <  1:814559/218‑1 (MQ=255)
                                                                                                                                                                                                                                cccGGCAGAG‑AAA‑ATG‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAAC‑GTCATGCTTCCGCCTTCGGTGCTAATCAACACATCGAAATTGCCGTTGATAATTGGCGTCATCACCGTACCGAC‑AATCACCGAAATg                     >  2:319402/1‑238 (MQ=255)
                                                                                                                                                                                                                                     cAGAG‑AAA‑ATG‑CCGCAC‑ATCGCCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAAC‑GTCATGCGTCCGCCTTCGGGGCTAATCAACACATCCAAATTGCCGTTGATAATTGGCGTCATTAGCGACCCGAA‑AATCAACGAAAAACCaaag               >  1:1212474/1‑237 (MQ=255)
                                                                                                                                                                                                                                     cAGAG‑AAA‑ATG‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAAC‑GTCATGCGTCCGCCTTCGGTGCTAATCAACACATCGAAATTGCCGTTGATAATTGGCGTCATCAGCGTACCGAC‑AATCAACGTAATGCCAATg               >  2:725090/1‑239 (MQ=255)
                                                                                                                                                                                                                                     cAGAG‑AAA‑ATG‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCACCGCCACCAGAACGCCGAGCAAC‑GTCTTGCTTCGGCCTTCGGTGCTAACCAACACAACGAAATTGCCGTGTCAAATGGGCGTCAACA‑AGGAACGACAAATCAACGAAAGGCCaagg               >  1:718980/1‑237 (MQ=255)
                                                                                                                                                                                                                                         caaaaatcg‑CCCCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAAC‑GTCATGCGTCCGCCTTCGGTGCTAATCAACACATCGAAATTGCCGTTGATAATTGGCGTCATCAGCGTACCGAC‑AATCAACGTAATGCCAATGGc             <  2:854989/231‑1 (MQ=255)
                                                                                                                                                                                                                                           aaa‑aTG‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCGCCAGAACGCCGAGCAAC‑GTCATGCGTCCGCCTTCGGTGCTAATCAACACATCGAAATTGCCGTTGATAATTGGCTTCATCAGCGTACCGAC‑AATCAACGTAATGCCAATGGCGa           >  2:596111/1‑238 (MQ=255)
                                                                                                                                                                                                                                            aa‑aTGCCCGCAC‑AACCCCGCCAG‑CCCCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAAC‑GTCATGCGTCCGCCTTCGGTGCTAATCAACACATCGAAATTGCCGTTGATAATTGGCGTCATCAGCGTACCGAC‑AATCAACGTAATGCCAATGGCg            <  2:228070/237‑1 (MQ=255)
                                                                                                                                                                                                                                                 g‑CCCCAC‑ACCCCCGGCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAAC‑GTCATGCGTCCGCCTTCGGTGCTAATCAACACATCGAAATTGCCGTTGATAATTGGCGTCATCAGCGAACCGAC‑AATCAACGTAATGCCAATGGCGATGCCaa     <  2:69876/239‑1 (MQ=255)
                                                                                                                                                                                                                                                     gCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAAC‑GTAATGCGTCCGCCTTCGGTGCTAATCAACAAATCGAAATTGCCGTTGATAATTGCCGTCATCAGCGTACGAAC‑AAACAACGTAATGcccgtccctataacaaatc  >  1:669913/1‑222 (MQ=255)
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AACACATTGTGAATGATCAGCGATTTTGCCAGCGAGAAGTCGGCTTTTAGCGACAAATCCTTCACTTTTGCCAGACGAATAAAACAGAAACCGAGGTT‑AATGATCGCGCCGCCGCCCATGATGACAACATAGCTTGGCAGAGCGACATACAGT‑GGATCGACGCCAAGTGCGGCAGCGG‑CT‑TCATGCAT‑CGGTTTTGCGGCGTTCATCGCAAAGGACA‑TCCCGGCAGAG‑AAA‑ATG‑CCGCAC‑ATCACCGCCAG‑CACCAGCCCTTTTTTCAGATTGAACTCTTCGGCTTTAATGCCCATCTTGCGCTCTTTCAACTGCCCGGCGCGAGTTACAATCCCTACGCCAATCAGCGCCACCAGAACGCCGAGCAAC‑GTCATGCGTCCGCCTTCGGTGCTAATCAACACATCGAAATTGCCGTTGATAATTGGCGTCATCAGCGTACCGAC‑AATCAACGTAATGCCAATGGCGATGCCAATTC  >  NC_000913/4099746‑4100220

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑