| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,065,745 | A→G | 19.3% | E54G (GAG→GGG) | agp → | glucose‑1‑phosphatase/inositol phosphatase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,065,745 | 0 | A | G | 19.3% | 117.5 / 3.6 | 57 | E54G (GAG→GGG) | agp | glucose‑1‑phosphatase/inositol phosphatase |
| Reads supporting (aligned to +/- strand): ref base A (16/29); new base G (10/2); total (26/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.16e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TTTTGCGAACCTGTTCCCGGAAAAAAGTCATATTTCTGTCACACTCTTTAGTGATTGATAACAAAAGAGGTGCCAGGAATGAACAAAACGCTAATCGCCGCAGCTGTGGCAGGGATAGTTTTACTCGCTTCAAACGCTCAGG‑CACAAACCGTACCGGAAGGCTATCAGCTACA‑GCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCT‑GGCGAACAATGGCAGTGTGCTGGAGCAGTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGAAGTGTATA‑TGGGCCATTACA‑TGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACA‑CCGTTTATGCCTATGCCAATAGTCTGCAACGTACCGTTGCGACCGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGA > NC_000913/1065507‑1065982 | tttgGCGAACTTGTTCCCGGAAAAAAGTCATTTTTCTGTCACACTCTTTAGGGATTGATAACAAAAGAGGTGCCAGGAATGAAAAAAACGCTAATCGCCGCAGCTGTGGCAGGGATAGTTTTACTCGCTTCAAACGCTCAGG‑CACAAACCGTACCGGAAGGCTATCAGCTACA‑GCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCT‑GGCGAACAATGGCAGTGTGCTGGa < 2:209637/239‑1 (MQ=255) aaaaaaGTCATATTTCTGTCACACTCTTTAGTGATTGATAACAAAAGAGGTGCCAGGAATGAACAAAACGCTAATCGCCGCAGCTGTGGCAGGGATAGTTTTACTCGCTTCAAACGCTCAGG‑CACAAACCGTACCGGAAGGCTATCAGCTACA‑GCAAATGCTCATGATGAGCCGCCATAACTTACGGGCGCCGCT‑GGGGAACAATGGCAGGGGGCTGGGGCAGTCGACGCCGAATAAAt > 2:291799/1‑239 (MQ=255) aaaaaaGTAATTTTTCTTCCACCCTTTTTAGTGATTGAAAACAAAAGAGCTGCCAGAAATGAACAAACCGCTAATCGCCGCAGCTGGGGCAGGGATAGTTTTACTCGCTTCAAACGCTCAGG‑CACAAACCGTACCGGAAGGCTATCAGCTACA‑GCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCT‑GGCGAACAATGGCAGTGTGCTGGAGCAGTCGACGCCGAATAAAt < 2:1176675/239‑1 (MQ=255) aagaaactttttCTGCCACCCTTTTTAATGATTGACAAAAAAAGGGGTGACAAGAATGAAAAAAACCCTAACCGCCGCAGGTGGGGTAGGGATAGTTTATCTCGCTTCAAACGCTCAGG‑AACAAACCGTACCGGAAGGCTATCAGCGGCA‑GCAAGGGCTCAGGGTGGGCCGCCATAACTTACGTGCGCCGCT‑GGCGAACAATGGCAGTGTGCTGGAGCAGTCGACGCCGAATAAATGGc < 1:1011829/230‑1 (MQ=255) aaaGTCATATTTCTGTCACCCTCTTTAGTGATTGAAAACAAAAGAGGTGCCAGGAATGAACAAAACGCTAATCGCCGCAGCTGGGGCAGGGATAGTTTTACTCGCTTAAAACGCTCAGG‑CACAAACCGTACCGGAAGGCTATCAGCTACA‑GCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCT‑GGCGAACAATGGCAGTGTGCTGGAGCAGTCGACGCCGAATAAATGGc < 2:889639/239‑1 (MQ=255) ctctTTAGTGATTGATAACAAAAGAGGTGCCAGGAATGAACAAAACGCTAATCGCCGCAGCTGTGGCAGGGATAGTTTTAATCGCTTCAAACGCTCAGG‑CACAAACCGTACCGGAAGGCTATCAGCTAAA‑GCAAATGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCT‑GGCGAACAATGGCAGGGTGCTGGGGGAGTCGACGCCGAATACATGGCCAGAATGGGAcctgtccctt > 2:1011829/1‑230 (MQ=255) tttAGTGATTGATAACAAAAGAGGTGCCAGGAATGAACAAAACGCTAATCGCCGCAGCTGTGGCAGGGATAGTTTTACTCGCCTCAAACGCTCAGG‑CACAAACCGTACCGGAAGGCTATCAGCTACA‑GCAACTGCTCATGATGAGCCCCCATAACTTACGCGCGCCGCG‑TGCGCACATATGCAGGGTGCTGGGGCAGTCTACGCCGACAAGAAGGCCAAAATagggccgcccgcggggg > 1:700121/1‑225 (MQ=255) gattgaaAACAAAAGAGGTGCAAGGAATGAACAAAACGCTAATCGCCGCAGCTGTGGCAGGGATAGTTTTACTCGCTTCAAACGCTCAGG‑CACAAACCGTACCGGAAGGCTATCAGCTACA‑GCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCT‑GGCGAACAATGGCAGTGTGCTGGAGCAGTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACt < 2:700121/238‑1 (MQ=255) attgatAACAAAAGAGGTGCCAGGAATGAACAAAACGCTAATCGCCGCAGCTGTGGCAGGGATAGTTTTACTCGCTTCAAACGCTCAGG‑CACAAACCGTACCGGAAAGCTATCAGCTACA‑GCAAGTGCTCATGATGAGCCGCCATAACTTACCTGCGCCGCT‑GGCGAACAATGGCAGTGTGCTGGGGCAGTCGACGCCGAAAAAATGGCCAGAATGGGACGTCCCCGAGGGGCACCTc > 2:115381/1‑238 (MQ=255) attgatAACAAAAGAGGTGCCAGGAATGAACAAAACGCTAATCGCCGCAGCTGTGGCAGGGATAGGTTTACTCGCTTCAAACGCTCAGG‑CACAAACCGTACCGGGAGGCTATCAGCCACA‑GCAAGAGCTCACTAAGAGCCGCCCTAACTTACGGGCGCCGCTCGGCGACCACGTGC‑GGGGGCTGGAGCCAGCGCAGCCGAATAAATAGCCCAAACGGGAGCGCCCCGGGGGGCagcacc > 1:25075/1‑234 (MQ=255) ttttaaaaaaaaGGGGGGCAGGGGATGAACAAAATGATAAGCGCCGCGGTGGTGGGGGGGATTGTTTATCCCGCTTCAAGCGCTCAGG‑CAAAATCCGTACCGGAAGGCTATCAGCGAAA‑ACAGGTGCTAATGATGAGCCGCCATAACTTACGTGCGCCGCT‑GGCGAACAATGGCAGTGTGCTGGAGCAGTCGACGCCGAATAAATGGCCAGAATGTGACGTCCCCGGTGGGCAACTca < 1:1118629/230‑1 (MQ=255) gatAACAAAAGAGGTGCCAGGAATGAACAAAACGCTAATCGCCGCAGCTGTGGCAGGGATAGTTTTACTCGCTTCAAACGCTCAGG‑CACAAACCGTACCGGAAGGCTATCAGCTACA‑GCAAGTGCTCATGATGAGCCGCCCTAACTTACGTGCGCCGCT‑GGCGAACAATGGCAGGTTGCTGGGGCAGTCGACGCCGAATAAATGGCCCGAATGGGACGTCCCCCGTGGGCAAATcacc > 2:286777/1‑238 (MQ=255) gatAACAAAAGAGGTGCCAGGAATGAACAAAACGCTAATCGCCGCAGCTGTGGCAGGGATAGTTTTACTCGCTTCAAACGCTCAGG‑CACAAACCGTACCGGAAGGCTATCAGCTACA‑GCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCT‑GGCGAACAATGGCAGTGTGCTGGGGCAGTCGACGCCGAATAAATGGCCCGAATGGACCGCCCCCGCGGGCCAACTaacac > 2:607740/1‑237 (MQ=255) gatAACAAAAGAGGTGCCAGGAATGAACAAAACGCTAATCGCCGCAGCTGTGGCAGGGATAGTTTTACTCGCTTCAAACCCTCAGG‑CACAAACCGTACCGGAAGGCTATCACCTACA‑GCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCT‑GGCGAACAATGGCAGTGTGCTGGAGCAGTCGACGCCGAATAAATGGCCAGAATGGGACTTCCCCGGTGGGCAAccactc > 2:1013092/1‑233 (MQ=255) aaaaaaaaaGGGGTGCCAAGAAAAAAAAACACCTAAACCGCCGCAGGTGGGGCGGGGATATTTTTACTCGTTTCAATCG‑ACAGGCCACAACCCGTACGGGAAGGCTACCAGCTACA‑GCAAGTGCTAAGGATGAGCCGCCATAACTTACGTGCGCCGCT‑GGCGAACAATGGCAGTGTGCTGGAGCAGTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTcaccac < 1:1040850/234‑1 (MQ=255) tAACAAAAGAGGTGCCAGGAATGAACAAAACGCTAATCGCCGCAGCTGTGGCAGGGATAGTTTTACTCGCTTCAAACGCTCAGG‑CACAAACCGTACCGGAAGGCTATCAGCTACA‑GCAAGTGCTCATGATGAGCCGCCCTAACTTACGTGCGCCGCT‑GGCGAACAAGGGCAGTGGGCTGGGGAAGTCGACGCCGAAAAAATGGCCAGAATGGGACGGCCCCGGGGGGCAAACCcccacc > 2:1250065/1‑239 (MQ=255) aaGAGGTGCCAGGAATGAACAAAACGCTAATCGCCGCAGCTGTGGCAGGGATAGTTTTACTCGCTTCAAACGCTCAGG‑CACAAACCGTACCGGAAGGCTATCAGCTACA‑GCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCT‑GGCGAACAATGGCAGTGTGCTGGAGCAGTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAAATCACCCCCCAAgg > 2:1118629/1‑238 (MQ=255) aaGAGGTGCCAGGAATGAACAAAACGCTAATCGCCGCAGCTGTGGCAGGGATAGTTTTACTCGCTTCAAACGCTCAGG‑CACAAACCGTACCGGAAGGCTATCAGCTACA‑GCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCT‑GGCGAACAATGGCAGGGTGCTGGGGCAGCTGACGCCGAATAAATGGCCAGAATTGGAAGACCCCGGTGGGAAACTCCCACCCAAAgag > 2:159849/1‑237 (MQ=255) aaGAGGTGCCAGGAATGAACAAAACGCTAATCGCCGCAGCTGTGGCAGGGATAGTTTTAATCGCTTCAAACGCTCAGG‑CCAAAAACGTACCGGAAGGCTATCAGCTACA‑GCAAATGCTCATGATGAGCCGCCATAAATTACGTGGGCCCCT‑GGCGAACAATGGCAGTGGGGTGGAGCCATCGGACCCGCAAAAAAGGCCACAAAGGGACGGCCCCGGGGGGGAAACCAACACAAAAgag > 1:164953/1‑237 (MQ=255) gTGCCAGGAATGAACAAAACGCTAATCGCCGCAGCTGTGGCAGGGATAGTTTTACTCGCTTCAAACGCTCAGG‑CACAAACCGTACCGGAAGGCTATCAGCTACA‑GCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCT‑GGGGAACAATGGAAGTGTGCTGGGGCAGTCGGCGCCGAATAAATGGCCGGAATGGGACGCACACGGGGGGGAACTCACCACCAAAGGTggggg > 2:87484/1‑236 (MQ=255) gTGCCAGGAATGAACAAAACGCTAATCGCCGCAGCTGTGGCAGGGATAGTTTTACTCGCTTCAAACGCTCAGG‑CACAAACCGTAACGGAAGGCTATCAGCTACA‑GCAAGTGCTCATGATGAGCCGCCCTAACTTACGTGCGCCGCT‑TGCGAACAATGGCAGTGTGCTGGGGCAGTCGACCCCGAATAAATGGCCCGAATGGGAGGTCCCCGGTGGGCAACTCACCACCAAAGGGGGCGt > 2:131808/1‑239 (MQ=255) attaaTAAACAAACCGCTAGTCCCCCCGTGTGGGGCAGGGATTGTTTTGCTCGTTTCACACCCTCAGC‑GCCAAACTGTCACGGAAGGCTACCAGCTAAA‑GGAAGGGGTGAGGAGGGACCGCCATAACCTACGGGCGCCGCT‑GGCGAACAATGGCAGGGTGCTGGAGCAGTCGACGCCGAATAAATGGCCAGAATTGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCg < 1:1083565/236‑1 (MQ=255) aaaaaaaCAAACCGCTAAAGCCCGCAGGTGTGGCAGGGATAGTTTTACTCCCTTAAACCGTCCAGG‑CAAAAACCGTCCCGGAAGGCTATCAGCTACA‑GCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCT‑GGCGAACAATGGCAGTGTGCTGGAGCAGTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGaa < 2:562805/234‑1 (MQ=255) aaTGAACAAACCTCAAATCCCCGCAGCTGTGGCAGGGATAGTTTTCCCCCTTACAAACGCTCAGG‑CACAACCCGTACCGGAAGGCTATCAGCTACA‑GCAAGTCCTCATGATGAGCCGCCATAACTTACGTGCGCCGCT‑GGCGAACAATGGCAGTGTGCTGGAGCAGTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCg < 2:213351/236‑1 (MQ=255) aaTGAAAAAACCGCAAAACGCCGAGGCGGGGGCGGGGATAGTTTTACTCGCTTCAAACGCCCAGG‑CACAAACCGAACCGGAAGGTTATCAGCTACA‑CGAAGTGCTCATGATGGGCCGCCATAACTTACGTGCGCCGCT‑GGCGAACAATGGCAGTGTGCTGGAGCAGTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCg < 2:1127041/236‑1 (MQ=255) aaTAAAAAAACCCCTAATCGCCCGAGCTGGGGCGGGGATAGTTTTACTCCCTTCAAACCCTCAGG‑CCCAAACCGTACCGGAAGGGTATCAGCTACA‑GCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCT‑GGCGAACAATGGCAGTGTGCTGGAGCAGTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCg < 2:586699/236‑1 (MQ=255) aaTAAAAAAAACGCTAACCGCCGCAGTGGGGGCAGGGATAGTTTTCCCCGCTTCAAACGCTCAGG‑CAAAAACCGTACCGGAAGGCTATCAGCTACA‑GCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCT‑GGCGAACAATGGCAGTGTGCTGGAGCAGTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGaa < 2:57223/238‑1 (MQ=255) cAAACCGCAAATCGCCGCAGCTGGGGCAGGAATAGTTTTACTCGTTTCAACCGCTCAGC‑CACAAACCGTCCCGGAAGGCTATCAGCTACA‑GCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCT‑GGCGAACAATGGCAGTGTGCTGGAGCAGTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGAAGTGtata < 2:164953/239‑1 (MQ=255) cGCTAATGGCGGCAGGTGTGGCAGGGATAGTTTTCCTCGCTTCAAACGCTCAGG‑CAAAAACCGTACCGGAAGGCTATCAGCTACA‑GCAGGTGCTCATGAGGGGCCGCCATAACTTACGTGCGCCGCT‑GGCGAACAATGGCAGTGTGCTGGAGCAGTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGAAGTGTATA‑TGGGc < 2:535840/239‑1 (MQ=255) ggggTATTTTTACTCTCTTTAACCGCTGCGA‑CCCAAACCGTACGGCAAGCGAATCAGCCTGA‑GGAAGGTATAGTGTGGGGCCGCGATAACTTACGGGCGGCGCT‑GGCGAACAATGGCAGTGTGCTGGAGCAGTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGAAGTGTATA‑TGGGCCATTACA‑TGCGTGAAtggctgg < 1:443675/238‑1 (MQ=255) ttttACCCGCTTAAAACGCTCAGG‑CACAAACCGTACCGGAAGGCTATCAGCTACA‑GCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCT‑GGCGAACAATGGCAGTGTGCTGGAGCAGTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGAAGTGTATA‑TGGGCCATTACA‑TGCGTGAATGGCTGGCa < 2:915196/233‑1 (MQ=255) cTCGCTTCAAACGCTCAGG‑CACAAACCGTACCGGAAGGCTATCAGCTACA‑GCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCT‑GGCGAACAATGGCAGTGTGCTGGAGCAGTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTCCCCGAAGTGTATA‑TGGGCCCTTACT‑TGCGTAAATGCCTGGCGCGGCAGGGGAt > 2:98570/1‑239 (MQ=255) ttCAAACGCTCAGG‑CACAAACCGTACCGGAAGGCTATCAGCTACA‑GCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCT‑GGCGAACAATGGCAGTGTGCTGGAGCAGTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGAAGGGTATA‑TGGGCCATTACA‑TGCGTGAATGGCTGGCAGATCAGGGGTTGGGGa > 2:1215320/1‑239 (MQ=255) ttCAAACGCTCAGG‑CACAAACCGTACCGGAAGGCTATCAGCTACA‑GCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCT‑GGCGAACAATGGCAGTGTGCTGGAGCAGTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGGGCCCCAAGGGGAAA‑TGGGCCATTTCA‑TGCGCGAATGGCGGGGAAGGCAggggggatgtg > 1:915196/1‑232 (MQ=255) catg‑CACAAACCGTACCGGAAGGCTATCAGCTACA‑GCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCA‑GGCGACCAATGGCAGTTTGCTGGAGCAGTCGACGCCGAATAAATGTCCCGAATGGGACGTCCCCGGTAGGCAACCCACCACCCAAGGTGGCGTGTTCGAAACGCCTA‑AGGGCCATTACAGTGAGT‑AATGGGTGGCCGAGCGggggtggggggaatgagggga > 1:857814/4‑222 (MQ=255) cAGG‑CACAAACCGTACCGGAAGGCTATCAGCTACA‑GCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCT‑GGCGAACAATGGCAGTGTGCTGGAGCAGTCGACGCCGAATAAATGGCCAGAATGGGACGTTCCCGGTGGGCAACTCCCCACCAAAGGGGGCGTGCTCGACGGGAAAA‑TGGGCCATTCAA‑TGCGTGAATGGCGGGACGGGCAgggggggggtgaaccggggga > 1:784920/1‑222 (MQ=255) ccaAACCGTCCGGGAAGGCTACAAGC‑ACAGGAAAGTGTTATGGAGGAGCCGCCATAACTTACGTGCGCCGCT‑GGCGAACAATGGCAGTGTGCTGGAGCAGTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGAAGTGTATA‑TGGGCCATTACA‑TGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGcc < 2:25075/238‑1 (MQ=255) ggAAGGCTGTCAGCTACA‑GCAAGTCCTCAGGATGACCCGCCATAACTTACGGGCGCCGCT‑GGCGAACAATGGCAGTGTGCTGGAGCAGTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGAAGTGTATA‑TGGGCCATTACA‑TGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTaca < 2:538338/239‑1 (MQ=255) ggAAGGCTATCAGCTACA‑GCAGGGTATCATGGTGGGCCGCCATACCTTACGTGCGCCGCT‑GGCGAACAATGGCAGTGTGCTGGAGCAGTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAATTCACCACCAAAGGTGGCGTGCTCGAAGTGTATA‑TGGGCCATTACA‑TGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTaca < 2:205121/239‑1 (MQ=255) aTCAGCTACA‑GCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCT‑GGCGAACAATGGCAGTGTGCTGGAGCAGTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGAAGTGTATA‑TGGGCCATTACA‑TGCGTGAATGGCTGGCAGAGCAGGGGATGGGGAAATCGGGGGAATGCCCGCCGCCGTACA‑CCGTTtat > 2:443775/1‑239 (MQ=255) cAGCTAAA‑GCAAGTGCTCATGATGGACCGCCAAAACTTACGTGCGCCGCT‑GGCGAACAATGGCAGTGAGCTGGAGCAGTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGCGGGGCAACTCACCCCCAAAGGTGGCCGGCTCGAAGTG‑ATATTGGGCCATTCAA‑TGCGTGACTGGCGGTCAGAGCAGGGGAGGGGGAAACAGGTGAATTGCCGCCCGCCGAACC‑CCGttattg > 1:1078507/1‑234 (MQ=255) tGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCT‑GGCGAACAATGGCAGTGTGCTGGAGCAGTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGGGGGCAACTCACCACCAAAGGAGGCGAGCTCGAAGGGTATA‑TGGGCCATTACA‑TGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAAGGGCCGCCGCCGCAAA‑CCTTTTGTGCCTATGACAAAAg > 1:729625/1‑238 (MQ=255) cATAACTTCCGTGGGGCGGT‑TGCATACAATGGCCTTGGTCGGGGGCACGCGACGTCGAATAAATGGCCAGAATGGGACGGCCCCGGTCGCCAACTCACCACCAAAGGGGGCGTGCTCGAAGTGTATA‑TGGGCCATTACA‑TGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACA‑CCGTTTATGCCTATGCCAATAGTCTGCAACGTACCGTTGc < 1:291799/239‑1 (MQ=255) aaacgtaccgtcgccccT‑GGCAAACAAAGGCAGTTGGCGCAAGCAGTTGTCCGCGAATAAATGGCCGAAATGTAACCTCCCCGGTGGGCACCTCAACACCAAAGGTGGCGTGTGTGAATTGTATT‑TGGTCCATTACA‑TGCGTGAATGGCTGTCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACA‑CCGTTTATGCCTATGCCAATAGTCTGCAACGTACCGTTGCGa < 1:87484/228‑1 (MQ=255) tACGTTCGCCGCT‑GGCGAACAATGGCAGTGTGCTGGAGCAGTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGAAGTGTATA‑TGGGCCATTACA‑TGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACA‑CCGTTTATGCCTATGCCAATAGTCTGCAACGTACCGTTGCGACCGca < 2:399610/239‑1 (MQ=255) tACGTGCGCCGCT‑GGCGAACAATGGCAGTGTGCTGGAGCAGTCGACGGCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGAAGTGTATA‑TGGGCCATTACA‑TGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACA‑CCGTTTATGCCTATGCCAATAGTCTGCAACGTACCGTTGCGACCGca < 2:380825/239‑1 (MQ=255) gTGCGCCGCT‑GGCGAACAATGGCAGTGTGCTGGAGCAGTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGAAGTGTATA‑TGGGCCATTACC‑TGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAACTGGGGGAATGCCCGCCGCCG‑ACACCCGTTTATGCCCTTGCCCAAAATCTGCACCGAACCGGTGCGACCGCCCAg > 1:65068/1‑239 (MQ=255) gTGCGCCGCT‑GGCGAACAATGGCAGTGTGCTGGAGCAGTCGAAGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGAAGTGTATA‑TGGGCCATTACA‑TGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACA‑CCGTTTATGCCTATGCCAATAGTCTGCAACGTACCGTTGCGACCGCACAg < 2:420914/239‑1 (MQ=255) cgccgcT‑GGCGAACAATGGCAGTGTGCTGGAGCAGTCGACGCCGAATCAATGGACAGAATGGGACGTCCCCGGTGGGCAACTAACCACCAAAGGATGCGTGCTCGAAGTGAATA‑TGGGCCATTACA‑TGCGGGCAGGGCTGGCAACGACGGGGATGGGCAAATCGGGGTAATGCCACCCGCCGTGCA‑CCGTTACTGCCCAGGAGAAAAACCTGCAACGTCCCGTTGAAACCgacaact > 1:285113/1‑231 (MQ=255) gtcaCAATGGCAGGTTGTTGGGTCAGTCGGCGCAGAAGAAATGCCCAGAATGGGAGGTCCCGGGGTGGCAACCAACATCCAAAGGGTGAGTGCGCGAAGTGTATG‑TGGGCCATTACA‑TGCGTGAAGGGCTGGCAGCGCAGGTGATGGTGAAAGCGGGGGAAGGCCCGCAGCCGTAGA‑CCGTTTATGCCTATGCCAATAGTCTGCAACGTACCGTTGCGACCGCACAGTTCTttatgaa < 1:778868/235‑4 (MQ=255) aCAATGGGAGTTTGCTGGAGCAGTCGGCCCCGAATAAATGGCCAGAATGGGACGGCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGATCGAAGTGTATA‑TGGGCCATTACA‑TGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACA‑CCGTTTATGCCTATGCCGATAGTCTGCAACGTACCGTTGCGACCGCACAGTTCTTTATTACCgg < 2:310642/238‑1 (MQ=255) cAATGGCAGTGTGCTGGAGCAGTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGAAGTGTATA‑TGGGCCATTACA‑TGCGTGAATGGCTGGCAGGGCAGGGGATGGGGAAATCGGGGGAATGCCCGGCGCCGTACA‑CCGTTTATGCCTTTGCCCATAGTCTACAACGAACCGTTGCGACCGCCAAGGTCTTTAATAACcgcg > 1:619154/1‑239 (MQ=255) cAATGGCAGTGTGCTGGAGCAGTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGAAGTGTATA‑TGGGCCATTACA‑TGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACA‑CCGTTTATGCCTATGCCAATAGTCTGCAACGTACCGTTGCGACCGCACAGTTCTTTATTACCGgcg < 2:423482/239‑1 (MQ=255) aaTGGCAGTGGGCTGGAGCAGTCGACGCCGAATAAATGGCCAGAATGGGGCGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGAAGTGTATA‑TGGGCCATTACA‑TGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACA‑CCGTTTATGCCTATGCCAATAGTCTGCAACGTACCGTTGCGACCGCACAGTTCTTTATTACCGgcg < 2:921141/238‑1 (MQ=255) gggtgCTGGAGCAGTCGACGCCGAATAAAGGGCCAGAATGGGACGTCCCCGGTGGGCAACTACCCACCAAGGGTGGCGTGCTCGAAGTGTATA‑TGGGCCATTACA‑TGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACA‑CCGTTTATGCCTATGCCAATAGTCTGCAACGTACCGTTGCGACCGCACAGTTCTTTATTACCGGCGCATTccc < 2:590132/236‑1 (MQ=255) tgtgCTGGAACAGTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGAAGTGTATA‑TGGGCCATTACA‑TGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACA‑CCGTTTATGCCTATGCCAATAGTCTGCAACGTACCGTTGCGACCGCACAGTTCTTTATTACCGGCGCATTCCCg < 2:689765/238‑1 (MQ=255) tgggcgggACCAGGCGACGCCGAATAAAGGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGAAGTGTATA‑TGGGCCATTACA‑TGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACA‑CCGTTTATGCCTATGCCAATAGTCTGCAACGTACCGTTGCGACCGCACAGTTCTTTATTACCGGCGCATTCCCg < 2:668293/232‑1 (MQ=255) gAGCAGTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGAAGTGTAAA‑TGGCCCATTACA‑TGCGTGAATGGCTGGCAGAGCAGGGGATGGGGAAACCGGGGGAATGCCCGCCGCCGTAGA‑CCGCTTTGGCCTATGCCAAAAGGCTGCAACGGACCGCTGCGCCCGCAAGGTTCTTTATTACCgggcacatcaccgggggggg > 1:721419/1‑221 (MQ=255) | TTTTGCGAACCTGTTCCCGGAAAAAAGTCATATTTCTGTCACACTCTTTAGTGATTGATAACAAAAGAGGTGCCAGGAATGAACAAAACGCTAATCGCCGCAGCTGTGGCAGGGATAGTTTTACTCGCTTCAAACGCTCAGG‑CACAAACCGTACCGGAAGGCTATCAGCTACA‑GCAAGTGCTCATGATGAGCCGCCATAACTTACGTGCGCCGCT‑GGCGAACAATGGCAGTGTGCTGGAGCAGTCGACGCCGAATAAATGGCCAGAATGGGACGTCCCCGGTGGGCAACTCACCACCAAAGGTGGCGTGCTCGAAGTGTATA‑TGGGCCATTACA‑TGCGTGAATGGCTGGCAGAGCAGGGGATGGTGAAATCGGGGGAATGCCCGCCGCCGTACA‑CCGTTTATGCCTATGCCAATAGTCTGCAACGTACCGTTGCGACCGCACAGTTCTTTATTACCGGCGCATTCCCGGGGTGTGA > NC_000913/1065507‑1065982 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |