| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,149,812 | G→T | 16.1% | V29F (GTC→TTC) | fabD → | malonyl‑CoA‑[acyl‑carrier‑protein] transacylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,149,812 | 0 | G | T | 16.1% | 124.6 / 2.6 | 59 | V29F (GTC→TTC) | fabD | malonyl‑CoA‑[acyl‑carrier‑protein] transacylase |
| Reads supporting (aligned to +/- strand): ref base G (11/37); new base T (8/3); total (19/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.94e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ACCTCTGCGGCCTCTGTCCCGTGCGCGCTGGATGAAGCTGTACGCGACGGGCGCATTAAGCCGGGGCAGTTGGTTCTGCTTGAAGCCTTTGGCGGTGGATTCACCTGGGGCTCCGCGCTGGTTCGTTTCTAGGATAAGGATTAAAACATGACGCAATTTGCATTTGTGTTCCCTGGACAGGGTTCTCAAACCGTTGGAATGCTGGCTGATATGGCGGCGAGCT‑ATCCAATTGTCGAAGAAACGTTTGCTGAAGCTTCTGCGGCGCTGGGCTACGACCTGTGGGCGCTGACCCAGCAGGGGCCAGCTGAAGAACTGAATAAAACCTGGCAAACTCAGCCTGCGCTGTTGACTGCATCTGTTGCGCTGT‑ATCGCGTATGGCAGCAGCAGGGCGGTAAAGCACCGGCAATGATGGCCGGTC‑ACAGCCTGGGGGAATACTCCGCGCTGGTTTGCGCTGGTGTGATTGATTTC > NC_000913/1149581‑1150048 | aCCCCTGCGGCCTCTGTCCCGTGCGCGCTGGATGAAGCTGTACGCGACGGGCGCATTAAGCCGGGGCAGTTGGTTCTGCTTGAAGCCTTTGGCGGTGGATTCACCTGGGGCTCCGCGCTGGTTCGTTTCTAGGATAAGGATTAAAACATGACGCAATTTGCATTTGTGTTCCCTGGACAGGGTTCTCAAACCGTTGGAATGCTGGCTGATATGGCGGCGAGCT‑ATCCAATTGTCgaaga < 2:262029/239‑1 (MQ=255) ctGCGGCCTCTGTCCCGTGCGCGCTGGATGAAGCTGTACGCGACGGGCGCATTAAGCCGGGGCAGTTGGTTCTGCTTGAAGCCTTTGGCGGTGGATTCACCTGGGGCTCCGCGCTGGTTCGTTTCTAGGATAAGGATTAAAACATGACGCAATTTGCATTTGTGTTCCCTGGACAGGGTTCTCAAACCGTTGGAATGCTGGCTGATATGGCGGGGGGCA‑TTCCAATTTTCCAAGaaaag > 2:1224443/1‑237 (MQ=255) ctGCGGCCTCTGTCCCGTGCGCGCTGGATGAAGCTGTACGCGACGGGCGCATTAAGCCGGGGCAGTTGGTTCTGCTTGAAGCCTTTGGCGGTGGATTCACCTGGGGCTCCCCGCTGGTTCGTTTCTAGGATAAGGCTTAAAACATGACGCAATTTGCATTTGTGTTCCCTGGACAGGGTTCTCAAACCGTTGGAATGCTGGCGGATATGGCGGGGCGCT‑ATCCAATTGTTGaaaaaaag > 1:1291094/1‑237 (MQ=255) tGCGGCCTCTGTCCCGTGCGCGCTGGATGAAGCTGTACGCGACGGGCGCATTAAGCCGGGGCAGTTGGTTCTGCTTGAAGCCTTTGGCGGTGGATTCACCTGGGGCTCCGCGCTGGTTCGTTTCTAGGATAAGGATTAAAACATGACGCAATTTGCATTTGTGTTCCCTGGACAGGGTTCTCAAACCGTTGGAATGCTGGCTGATATGGCGGCGGGCT‑ATCCAATTGTCGAAGaaaaga > 2:439097/1‑236 (MQ=255) gCGGCCTCTGTCCCGTGCGCGCTGGATGAAGCTGTACGCGACGGGCGCATTAAGCCGGGGCAGTTGGTTCTGCTTGAAGCCTTTGGCGGTGGATTCACCTGGGGCTCCGCGCTGGTTCGTTTCTAGGATAAGGATTAAAACATGACGCAATTTGCATTTGTGTTCCCTGGACAGGGTTCTCAAACCGTTGGAATGCTGGCTGATATGGCGGCGGGCT‑TTCCAATTTTCGACGaaaactt > 2:1074299/1‑235 (MQ=255) gCGGCCTCTGTCCCGTGCGCGCTGGATGAAGCTGTACGCGACGGGCGCATTAAGCCGGGGCAGTTGGTTCTGCTTGAAGCCTTTGGCGGTGGATTCACCTGGGGCTCCGCGCTGGTTCGTTTCTAGGATAAGGATTAAAACATGACGCAATTTGCATTTGTGTTCCCTGGACAGGGTTCTCAAACCGTTGGAATGCTGGCTGATATGGCGGCGAGGT‑ATTCAATTGTGGAAGAAAAGtt > 2:243744/1‑239 (MQ=255) gTCCCGTGCGCGCTGGATGAAGCTGTACGCGACGGGCGCATTAAGCCGGGGCAGTTGGTTCTGCTTGAAGCCTTTGGCGGTGGATTCACCTGGGGCTCCGCGCTGGTTCGTTTCTAGGATAAGGATTAAAACATGACGCAATTTGCATTTGTGTTCCCTGGACAGGGTTCTCAAACCGTTGGAATGCTGGCTGATATGGCGGCGAGCT‑ATCCAATTGTCGAAGAAACGTTTGCTGAAGc < 2:1288535/239‑1 (MQ=255) gTGCGCGCTGGATGAAGCTGTACGCGACGGGCGCATTAAGCCGGGGCAGTTGGTTCTGCTTGAAGCCTTTGGCGGTGGATTCACCTGGGGCTCCGCGCTGGTTCGTTTCTAGGATAAGGATTAAAACATGACGCAATTTGCATTTGTGTTCCCTGGACAGGGTTCTCAAACCGTTGGAATGCTGGCTGGTATGGCGGCGAGCG‑ATCCCATTGTGGAAGAAACGGTTTCTGAAGCTTTTg > 2:490746/1‑239 (MQ=255) tGCGCGCTGGATGAAGCTGTACGCGACGGGCGCATTAAGCCGGGGCAGTTGGTTCTGCTTGAAGCCTTTGGCGGTGGATTCACCTGGGGCTCCGCGCTGGTTCGTTTCTAGGATAAGGATTAAAACATGACGCAATTTGCATTTGTGTTCCCTGGACAGGGTTCTCAAACCGTTGGAATGCTGGCTGATATGGCGGCGGGCT‑ATCCACTTTTCGCAGAAACGGTTTCTTGAGCTTTTgc > 2:1041568/1‑239 (MQ=255) tGCGCGCTGGATGAAGCTGTACGCGACGGGCGCATTAAGCCGGGGCAGTTGGTTCTGCTTGAAGCCTTTGGCGGTGGATTCACCTGGGGCTCCGCGCTGGTTCGTTTCTAGGATAAGGATTAAAACATGACGCAATTTGCATTTGTGTTCCCTGGACAGGGTTCTCAAACCGTTGGAATGCTGGCTGATATGGCGGCGAGGC‑CTCCAAATTTTgaagaacacgtgttggaaaatctttc > 2:1279291/1‑219 (MQ=255) gggtGGATGAAGCGGTGCCCAGCGGGCGTCTAAACCCGGGTCAGTTGGTGTGGTTTGAAGCCTTTGGCGGTGGATTCCCCTGGGGCTCCGCGCTGGTTCGTTTCTAGGATAAGGATTAAAACATGACGCAATTTGCATTTGTGTTCCCTGGACAGGGTTCTCAAACCGTTGGAATGCTGGCTGATATGGCGGCGAGCT‑ATCCAATTGTCGAAGAAACGTTTGCTGAAGCTTCTg < 1:968715/231‑1 (MQ=255) tGGATGAAGCTGTACGGGGAGGGGGGATTAAGCGTGGGTGTGTGGTTCTGCTTGAAGCCTTTGGCGGTGGATTCACCTGGGGCTCCGCGCTTGTTCGGTTCTAGGATAAGGATTAAAACATGACGCAATTTGCATTTGTGTTCCCTGGACAGGGTTCTCAAACCGTTGGAATGCTGGCTGATATGGCGGCGAGCT‑ATCCAATTGTCGAAGAAACGTTTGCTGAAGCTTCTGCGGCGCt < 1:172406/238‑1 (MQ=255) gtggtgaaggtggtccgggcGGGCGGATTAAGCCGGGCGAGTTGGTTCTGCTTGAAGCCTTTGGCGGTGGATTACCCTGGGGCTCCGCGCTGGTTCGTTTCTAGGATAAGGATTAAAACATGACGCAATTTGCATTTGTGTTCCCCGGACAGGGTTCTCAAACCGTTGGAATGCTGGCTGATATGGCGGCGAGCT‑ATCCAATTGTCGAAGAAACGTTTGCTGAAGCTTCTGCGGCGCt < 1:145220/219‑1 (MQ=255) tgtcgtgtgccggtgtggCGCATTCAGTCTGTGCACTTGGCTCTGGCTGAACCCTGTGGCGGTGTATTCCCCTGGGGCCTCGGGTCTTTGCGTTTCTAGGATAAGGATTCAAACATGACGCAATTTGCATTTGTGTTCCCTGGACAGGGTTCTCAATCCGTTGGAATTCTGGCTGATATGGCGGCGAGCT‑ATCCCATTGTGGAAGAAACGTTTGCTGAAGCTTCTGCGGCGCTGGGGTa < 1:131791/223‑1 (MQ=255) gaagttgtagtggaggggCGAATTAAGCCGGGGCAGTTGGTTCTGCTTGAAGCCTTTGGCGGTGTATTCACCTGGGGCTCCGCGCTGGTTCTTTTCTAGGATAAGGATTAAAACATGACGCAATTTGCATTTGTGTTCCCTGGACAGGGTTCTCAAACCGTTGGAATGCTGGCTGATATGGCGGCGAGCT‑ATCCAATTGTCGAAGAAACGTTTGCTGAAGCTTCTGCGGCGCTGGGCTa < 1:840964/224‑1 (MQ=255) aGCTGTACGCGACGGGCGCATTAAGCCGGGGCAGTTGGTTCTGCTTGAAGCCTTTGGCGGTGGATTCACCTGGGGCTCCGCGCTGGTTCGTTTCTAGGATAAGGATTAAAACATGACGCAATTTGCATTTGTGTTCCCTGGACAGGGTTCTCAAACCGTTGGAATGCTGGCTGATATGGCGGCGGGCT‑ATCCAATTTTTGCAGAAAAGGTTGCTGAAGCTTCTGAGGCCGTggggccgg > 2:968715/1‑234 (MQ=255) cgcgcggggcctactAAGGCGGGGCAGTTTGTTCTGCTTGAAGCCTTTGGCGGGTGATTCACCTGGGGCTGCGCGCTGGTTCGTTTCTAGGATAAGGATTAAAACATGACGCAAGTTGCATTTGTGTTCCCTGGACAGGGTTCGCAAACCGTTGGAATGCTGGCTGATATGGCGGCGAGCT‑ATCCAATTGTCGAAGAAACGTTTGCTGAAGCTTCTGCGGCGCTGGGCTACGACCtgtg < 2:1124458/225‑1 (MQ=255) gACGGGGTCGTTAAGCCGGGGTTGTTGGTTTGGTTGGAGGCCTTTGGGGTTGGCTTCACCTGGGGCTCCGCGCTGGTTGGGTTCTAGGATAAGGATTAAAACATGACGCAATTTGCATTTGTGTTCCCTGGACAGGGTTCTCAAACCGTTGGAATGCTGGCTGATATGGCGGCGAGCT‑ATCCAATTGTCGAAGAAACGTTTGCTGAAGCTTCTGCGGCGCTGGGCTACGACCTGTGGgc < 1:712123/239‑1 (MQ=255) gACGGGCGCATTAAGCCGGGGCAGTTGGTTCTGCTTGAAGCCTTTGGCGGTGGATTCACCTGGGGCTCCGCGCTGGTTCGTTTCTAGGATAAGGATTAAAACATGACGCAATTTGCATTTGTGTTCCCTGGACAGGGTTCTCAAAACGTTGGAATGCTGGCTGATATGGCGGCGAGGT‑ATCCAATTTTTGAAGAAACGTTTGTTTGAGCTTCTGAGGCGGTGGGGTATGACCTGTgggg > 2:552682/1‑238 (MQ=255) aCGGGCGCATTAAGCCGGGGCAGTTGGTTCTGCTTGAAGCCTTTGGCGGTGGATTCACCTGGGGCTCCGCGCTGGTTCGTTTCTAGGATAAGGATTAAAACATGACGCAATTTGCATTTGTGTTCCCTGGACAGGGTTCTCAAACCGTTGGAATGCTGGCTGATATGGCGGCGGGCT‑ATCCAATTTTCGCAGAAACGTTTGCGTAAGCTTCTGCGGCGCCGGGCTACGACCTTTggggg > 2:281088/1‑237 (MQ=255) cgtaTTAGGCCGGGGCTGTTGTTTCTGCTGGGAGCCTTTGGGGGTGGATTCACCTGGGGCTCGGCGCTGGTTCGTTCCTAGGATAAGGATTAAAACATGACGCAATTTGCATTTGTGTTCCCTGGACAGGGTTCTCAAACCGTTGGAATGCTGGCTGATATGGCGGCGAGCT‑ATCCAATTGTCGAAGAAACGTTTGCTGAAGCTTCTGCGGCGCTGGGCTACGACCTGTGGGCGCTGa < 1:281088/235‑1 (MQ=255) tgatgcgtggtctgtGGTTCTTCTTGAAGTCTGTGGCTGTGGATTCACGTGGGGACGCGGGTGGGTTCGTTTCAAGGATAAGGATTAAAACATGACGCAATTTGCATGTGTGTTCACTGGACTGGGTTCTCAAACCGGTGGAATGCTGGCTGATATGGCGGTGAGCT‑ATCCAATTGTCGAAGAAACGTTTGCTGAAGCTTCTGCGGCGCTGGGCTACGACCTGTGGGCGCTGACCcagc < 1:1022125/225‑1 (MQ=255) cGGGGGAGTTGGTTCTGGTTGAAGCCTTTGGCGGTGGATTCACCTGGGGCTCCGCGGTGGTTCGTTTCTAGGATAAGGATTAAAACATGACGCAATTTGCATTTGTGTTCCCTGGACAGGGTTCTCAAACCGTTGGAATGCTGGCTGATATGGCGGCGAGCT‑ATCCAATTGTCGAAGAAACGTTTGCTGAAGCTTCTGCGGCGCTGGGCTACGACCTGTGGGCGCTGACCCAGCAggg < 2:92904/238‑1 (MQ=255) ggCAGTTGGTTCTGCTTGAAGCCTTTGGCGGTGGATTCACCTGGGGCTCCGCGCTGGTTCGTTTCTAGGATAAGGATTAAAACATGACGCAATTTGCATTTGTGTTCCCTGGACAGGGTTCTCAAACCGTTGGAATGCTGGCTGATATGGCGGCGAGCT‑ATCCAATTGTCGAAGAAACGTTTGCTGAAGCTTCTGCGGCGCTGGGCTACGACCTGTGGGCGCTGACCCAGCAGGGGcc < 2:1226556/238‑1 (MQ=255) tttttttttgagtgttgggCGGGGGATTCACCTGTGGCTCCGCTCTGGTTCGTTTCTAGGATAAGGATTAAAGCAGGACGCAATTTGCATGTGTGTTCCGTGGGCAGGGTTCTCATACCGGTGGAATGCTGGCTGATATGGCGGCGAGCT‑ATCCAATTGTCGACGAAACGTTTGCTGAAGCTTCTGCGGCGCTTGGCTACGACCTTTGGGCTCTGACCCAGAAGGGGCCAGCTgaagaa < 1:971912/222‑1 (MQ=255) tccgCTTGAAGCCTTTGGCGGTTGATTCACCTGGGGCTCCGCGCTGGTTCGTTTCTAGGGTAAGGATTAAATCATGACGCAATTTGCATTTGGGCTCCCTGGACAGGGTTCTCAAACCGTTGGAATGCTGGCTGATATGGCGGCGAGCT‑ATCCAATTGTCGAAGAACCGTTTGCTGAAGCTTCTGCGGCGCTGGGCTACGTCCTGTGGGCGCTGACCCAGCAGGGGCCAGCTgaagaa < 2:278340/235‑1 (MQ=255) cTTGAAGCCTTTGGCGGTGGATTCACCTGGGGCTCCGCGCTGGTTCGTTTCTAGGATAAGGATTAAAACATGACGCAATTTGCATTTGTGTTCCCTGGACAGGGTTCTCAAACCGTTGGAATGCTGGCTGATATGGCGGCGAGCT‑ATCCCATTGTTGAAGAAACGTTTGCTGAAGCTTCTGCGGGGCTGGGCTACGACCCGTGGGGGCTGACCCAGCCGGGGGCAGCTGAAGAACTTaa > 2:1185149/1‑239 (MQ=255) tGGATTCACCTGGGGCTCCGCGCTGGTTCGTTTCTAGGATAAGGATTAAAACATGACGCAATTTGCATTTGTGTTCCCTGGACAGGGTTCTCAAACCGTTGGAATGCTGGCTGATATGGCGGCGAGCT‑ATCCAATTGTCGAAGAAACGTTTGCTGAAGCTTCTGCGGCGCTGGGCTACGACCTGTGGGCGCTGACCCAGCAGGGGCCAGCTGAAGAACTGAATAAAACCTGGCAAACt < 2:1100103/238‑1 (MQ=255) cACCTGGGGCTCCGCGGTGGTTCGTTTCTAGGATAAGGATTAAAACATGACGCAATTTGCATTTGTGTTCCCTGGACAGGGTTCTCAAACCGTTGGAATGCTGGCTGATATGGCGGCGAGCT‑ATCCAATTGTCGAAGAAACGTTTGCTGAAGCTTCTGCGGCGCTGGGCTACGACCTGTGGGCGCTGACCCAGCAGGGGCCAGCTGAAGAACTGAATAAAACCTGGCAAACTCAGCCTg < 2:398399/239‑1 (MQ=255) gggCTCCGCGCTGGTTCGTTTCTAGGATAAGGATTAAAACATGACGCAATTTGCATTTGTGTTCCCTGGACAGGGTTCTCAAACCGTTGGAATGCTGGCTGATATGGCGGCGAGCT‑ATCCAATTGTCGAAGAAAAGTTTGCTGAAGCTTCTGCGGCGCTGGGCTACGACCTGTGGGCGCTGACACAGCAGGGGCCAGCGGAAGAACTGAATAAAACCTGGCAAACTCAGCCTGCGCGGt > 2:893027/1‑239 (MQ=255) ggggtGGTTCGTTTCTAAGATAAGGATTAAAACATGGCGCAATTTGCATTTGTGGTCCCTGGACAGGGTTCTCAAACCGTTGGAATGCTGGCTGATATGGCGGCGAGCT‑ATCCAATTGTCGAAGAAACGTTTGCTGAAGCTTCTGCGGCGCTGGGCTACGACCTGTGGGCGCTGACCCAGCAGGGGCCAGCTGAAGAACTGAATAAAACCTGGCAAACTCAGCCTGCGCTGTTGACTGc < 2:129448/235‑1 (MQ=255) ctgttGGTTCGGTTATTGGATAAGGATTAAAACATGACGCAATTTGAATTTGTGTTCCCTGGACAGGGGTCTCAAACCGTTGGAATGCTGGCTGATATGGCGGCGAGCT‑ATCCAATTGTCGAAGAAACGTTTGCTGAAGCTTCTGCGGCGCTGGGCTACGACCTGTGGGCGCTGACCCAGCAGGGGCCAGCTGAAGAACTGAATAAAACCTGGCAAACTCAGCCTGCGCTGTTGACTGc < 1:1224443/235‑1 (MQ=255) gttGGTTCGTTTCTTAGATAAGGATTAAAACATGACGCAATTTGGATTTGTGTTCCCTGGACAGGGTTCTCAAACCGTTGGAATGCTGGCTGATATGGCGGCGAGCT‑ATCCAATTGTCGAAGAAACGTTTGCTGAAGCTTCTGCGGCGCTGGGCTACGACCTGTGGGCGCTGACCCAGCAGGGGCCAGCTGAAGAACTGAATAAAACCTGGCAAACTCAGCCTGCGCTGTTGACTGCAt < 2:1140513/237‑1 (MQ=255) tCGTTTCTAGGATAAGGATTAAAACATGACGCAATTTGCATTTGGGTTCCCTGGACAGGGTTCTCAAACCGTTGGAATGCTGGCTGATATGGCGGCGAGCT‑ATCCAATTGTCGAAGAAACGTTTGCTGAAGCTTCTGCGGAGCTGGGCTACGACCTGTGGGCGCTGACCCAGCAGGGGCCAGCTGAAGAACTGAATAAAACCTGGCAAACTCAGCCTGCGCTGTTGACTGCATCTGtt < 2:1276847/238‑1 (MQ=255) ttttcgtgtaTAAGTATTAAAACTTGACGCAATTTGCATTTGTGTTCCCTGGACAGGGTTCTCAATCCGTTGGATTGCGGGCTGTTATGGCGGCGAGCT‑ATCCAATCTTCGAAGAACCGTTTGCTGAAGCTTCTGCGGCGCGGGGCTACGACCTGTGGGCGCTGACCCAGCAGGGGCCAGCTGAAGAACTGAATAAAACCTGGCAAACTCAGCTTGCGCTGTTGACTGCATCTGTTgcg < 1:1279291/230‑1 (MQ=255) gTTTCTAGGATAAGGATTAAAACATGACGCAATTTGCATTTGTGTTCCCTGGACAGGGTTCTCAAACCGTTGGAATGCTGGCTGATATGGCGGCGAGCT‑ATCCAATTGTCGAAGAAACGTTTGCTGAAGCTTCTGCGGCGCTGGGCTACGACCTGTGGGCGCTGACCCAGCAGGGGCCAGCTGAAGAACTGAATAAAACCTGGCAAACTCAGCCTGCGCTGTTGACTGCATCTGTTgcg < 2:24801/239‑1 (MQ=255) agacagaGGATAAGGATTAAAACATGACGCAATTTGCATTTGTGTTCCCTGGACAGGGTTCTCAAACCGTTGGAATGCTGGCTGATATGGCGGCGAGCT‑ATCCAATTGTCGAAGAAACGTTTGCTGAAGCCTCTGCGGCGCTGGGCTACGACCTGTGGGCGCTGACCCAGCAGGGGCCAGCTGAAGAACTGAATAAAACCTGGCAAACTCAGCCTGCGCTGTTGACTGCATCTGTTgcg < 2:751366/233‑1 (MQ=255) ttCTAGGTGAAGGATTAAAACTTGCCGCAATTTGATTTTGTGTCCCGTGGACAGGGTTCCAAAACCGTTGGAATGCTTGCTGATATGGCGGCGAGCT‑ATCCAATTGTCGAAGAAACGGTGGCTGAAGCTTCTGCGGCGCTGGGCTACGACCTGTGGGCGCTGACCCAGCAGGGGCCAGCTGAAGAACTGAATAAAACCTGGCAAACTCAGCCTGCGCTGTTGACTGCTTCTGTTGCGCt < 1:1074299/239‑1 (MQ=255) gATAAGGATTAAAACATGCCGCAATTTGCATTTGTGTTCCCTGGACAGGGTTCTCAAACCGTTGGAATGCTGGCTGATATGGCGGCGAGCT‑ATCCAATTGTCGAAGAAACGTTTGCTGAAGCTTCTGCGGCGCTGGGCTACGACCTGTGGGCGCTGACCCAGCAGGGGCCAGCTGAAGAACTGAATAAAACCTGGCAAACTCAGCCTGCGCTGTTGACTGCATCTGTTgcg < 2:411052/231‑1 (MQ=255) ttAAAACATGACGCAATTTGCATTTGTGTTCCCTGGACAGGGTTCTCAAACCGTTGGAATGCTGGCTGATATGGCGGCGAGCT‑ATCCAATTGTCGAAGAAACGTTTGCTGAAGCTTCTGCGGCGCTGGGCTACGACCTGTGGGCGCTGACCCAGCAGGGGCCAGCTGAAGAACTGAATAAAACCTGGCAAACTCAGCCTGCGCTGTTGACTGCATCTGTTGCGCTGT‑ATCGCGTATGgc < 2:1237163/239‑1 (MQ=255) ttAAAACATGACGCAATTTGCATTTGTGTTCCCTGGACAGGGTTCTCAAACCGTTGGAATGCTGGCTGATATGGCGGCGAGCT‑ATCCAATTGTCGAAGAAACGTTTGCTGAAGCTTCTGCGGCGCTGGGCTACGACCTGTGGGCGCTGACCCAGCAGGGGCCAGCTGAAGAACTGAATAAAACCTGGCAAACTCAGCCTGCGCTGTTGACTGCATCTGTTGCGCTGT‑ATCGCGTATGgc < 2:1186456/239‑1 (MQ=255) tgccGCACTTTTCTTTTTTGTTCCCGGGACTGGGTTCTCAAACCGTTTGAAGGCTGGCTGATATGGCGGCGAGCT‑ATCCAAGTGTCGAAGAAACGGTTGCTGAAGCTTCTGAGGCGCTGGGCTACGACCTGTGGGCGCTGACCCAGCAGGGGCCAGCTGAAGAACTGAATAAATCCTGGCAAACTCAGCCTGCGCTGTTGACTGCATCTGTTGCGCTGT‑ATCGCGTATGGcagcagcag < 1:1185149/236‑1 (MQ=255) gttcgcgATTTGCTTTTTGTTTTCCTGGACCGGGTTCTCAACGCGTTGGGATGTGGGCTGCGTGTGCGGCGAGCT‑AGCCAATTGTAGAAAGAACGTTGGCCGAAGGTTCTGCGGCGGTGGGCTACGACCTGTGGGCGCTGACCCAGCAGGGGCCAGCTGAAGAACTGAATAAAACCTGGCAAACTCAGCCTGCGCTGTTGACTGCATCTGTTGCGCTGT‑ATCGCGTATGGcagcagcag < 1:1223958/236‑1 (MQ=255) ccgacaTTTTCCTTTTTTTTCCCTGGGCCGGGTTCTCAAACCGTTGGAATGGTGGTTGATATGGCGGCGAGCT‑ACCCAATTGTCGAAGAAACGTTTGCTGAAGCTTCTGCGGCGCTGGGCTACGACCTGTGGGCGCTGACCCAGCAGGGGCCAGTTGAAGAACTGAATAAAACCTGGCAAACTCAGCCTGCGCTGTTGACTGCATCTGTTGCGCTGT‑ATCGCGTATGGCAGCAGCAggg < 1:552682/234‑1 (MQ=255) tttGCATTTGTGTTCCCTGGACAGGGTTCTCACACCGTTGGAATGCTGGCTGATATGGCGGCCAGCT‑ATCAAATTTTCGAAGAAAAGTGTGCTGAAGCTTCTCCGGCCCCCGCCTACCGCCTTGCGGTCCCGTCCCAACCAGGGCCATCTGAAGTACTGAGTTAAACCTCGCACACTCTACCAGCGCGCTGGAGTGCACCTATTGCGCTTT‑GTCCCGCATGgcacgcttcggggggcac > 1:210564/1‑224 (MQ=255) ggTTCTCAAACCGTTGGAATGCTGGCTGATATGGCGGCGAGCT‑ATCCAATTGTCGAAGAAACGATTTCTGAAGCTTCTGAGGCGCTGGGCTGCGACATGTGGGGGCTGACCCCGCAGGGGCCCCCTGAAGAACAGAATAAAACCTCGCCAACTCCGCCCGCGCTGTTGGCTGCATCTGTTTGTCTGTAATCGCG‑AAGGCAGCCACAGGGCGGTAAAGAACCAGCCAAGATGGCGGGTc‑a > 1:1038844/1‑239 (MQ=255) tttCTCTAACCGTTGGAATGCTGGTTGGT‑TGGGGGGGGGATGTTCCAATTTTCGAAGAAACCGTTCTAGAAGCTGCTGCAGGCCTGGGCTAAGGACTGTGGGCGCTGACCCAGCAGGGGCCAGCTGAAGCACTGAATAAAACCTGGCAAACTCGGCCTGCGCTGTTGACTGCATCTGTTGCGCTGT‑ATCGCGTATGGCAGCAGCAGGGCGGTAAAGCACCGGCAATGATGGCCGGTc‑a < 1:603583/237‑1 (MQ=255) gTTCTCAAACCGGTGGAATGCTGGCTGATATGGCGGCGAGCT‑TTCCAATTGTCGAAGAAACGTTTGCTGAAGCTTCTGCGGCGCTGGGCTACGACCTGTGGGCGCTGACCCAGCAGGGGCCAGCTGAAGAACTGAATAAAACCTGGCAAACTCAGCCTGCGCTGTTGACTGCATCTGTTGCGCTGT‑ATCGCGTATGGCAGCAGCAGGGCGGTAAAGCACCGGCAATGATGGCCGGTc‑a < 2:512885/238‑1 (MQ=255) gTTCCCAAACCGTTGGAATGCTGGCTGATATGGCGGCGAGCT‑ATCCAATTGTCGAAGAAACGTTTGCTGAAGCTTCTGCGGCGCTGGGCTACGACCTGTGGGCGCTGACCCAGCAGGGGCCAGCTGAAGAACTGAATAAAACCTGGCAAACTCAGCCTGCGCTGTTGACTGCATCTGTTGCGCTGT‑ATCGCGTATGGCAGCAGCAGGGCGGTAAAGCACCGGCAATGATGGCCGGTc‑a < 2:1291094/238‑1 (MQ=255) tcAAACCGTTGGAATGCTGGCTGATATGGCGGCGAGCT‑ATCCAATTGTCGAAGAAACGTTTGCTGAAGCTTCTGCGGCGCTGGGCTACGACCTGTGGGCGCTGACCCAGCAGGGGGCAGCTGAAGAACTGAATAAAACCTGGCCAACTCAGCCTGCGCTGTTTACTGCATCTGTTGGGCTGG‑ATCGCGGATGGCAGCAGCAGGGCGGGAAAGAACCGGCAATAGTGGTCgggccaagcc > 2:98356/1‑231 (MQ=255) ccctgccGTTGGAATTGTGGGTGAGTGGGCGGCGATCT‑TTCCAATTGTCGAAGAACCGTTTGCTGAAGGTTCTGGGGCGCTGGGCTACGACCTGTGGGCGCTGACCCAGGAGGGGCCAGCTGAAGAACTGAATAAAACCTGGCAAACTCAGCCTGCGCTGTTGACTGCATCTGTTGCGCTGT‑ATCGCGTATGGCAGCAGCAGGGCGGTAAAGCACCGGCAATGATGGCCGGTC‑ACAGcc < 1:439097/234‑1 (MQ=255) tGGAATGCTGGCTGATATGGCGGCGAGGT‑ATCCAATTGTCGAAGAAACGGTTGCTGAAGCTTCTGCGGCGCTGGGCTCCGACCCGTGGGCGCTGACCCAGCAGGGGCCCGCTGAAGCACTGCATAAAACCCGGCAACATCAGCCCGCGCCGTTGACTGCATCTGTTGCGCCGT‑ATTGCGGATTGCAGCGGCAGGGCGGTGAAGCAACGGGGACGAGGGCCGGGC‑ACCGCCCgggggggt > 1:743439/1‑236 (MQ=255) tgtagggcggtcggCT‑TTCCAATTGTCGAAGAACCGTTTGCTGGAGCTTCGGCGGCGCTGGGCTACGACCTGGGGGCGCTGACCCAGCAGGGGCCAGCTGAAGAACTGAATAAAACCTGGCAAACTCAGCCTGCGCTGTTGACTGCATCTGTTGCGCTGT‑ATCGCGTATGGCAGCAGCAGGGCGGTAAAGCACCGGCAATGATGGCCGGTC‑ACAGCCTGGGGGAATACTCCGCGCTGGt < 1:243744/226‑1 (MQ=255) gATATGGCGGCGAGCT‑ATCCAATTGTCGAAGAAACGTTTGCTGAAGCTTCTGCGGCGCTGGGCTACGACCTGTGGGCGCTGACCCAGCAGGGGCCAGCTGAAGAACTGAATAAAACCTGGCAAACTCAGCCTGCGCTGTTGACTGCATCTGTTGCGCTGT‑ATCGCGTATGGCAGCAGCAGGGCGGTAAAGCACCGGCAATGATGGCCGGTC‑ACAGCCTGGGGGAATACTCCGCGCTGGt < 2:33727/239‑1 (MQ=255) atatGGCGGCGAGCT‑ATCCAATTGTCGAAGAAACGTTTGCTGAAGCTTCTGCGGCGCTGGGCTACGACCTGTGGGCGCTGACCCAGCAGGGGCCAGCTGAAGAACTGAATAAAACCTGGCAAACTCAGCCTGCGCTGTTGACTGCATCTGTTGCGCTGT‑ATCGCGTATGGCAGCAGCAGGGCGGTAAAGCACCGGCAATGATGGCCGGTC‑ACAGCCTGGGGGAATACTCCGCGCTGGt < 2:520146/238‑1 (MQ=255) gggggcgggttttCCAATTTTGGGAGAGTCGTGTGCGTAAGCTTCGGGGGGGCTGGGCTTCGACCTGTGGGCGCTGGCCCAGCAGGGGCCAGCTGAAGAACTGAATAAAACCTGGCAAACTCAGCCTGGGCTGTTGACTGCATCTGTTGCGCTGT‑ATCGCGTATGGCAGCAGCAGGGCGGTAAAGCACCGGCAATGATGGCCGGTC‑ACAGCCTGGGGGAATACTCCGCGCTGGTTTgcg < 1:1041568/227‑1 (MQ=255) cggcgAGCT‑ATCCAATTGTCGAAGAAACGTTTGCTGAAGCTTCTGCGGCGCTGGGCTACGACCTGTGGGCGCTGACCCAGCAGGGGCCAGCTGAAGAACTGAATAAAACCTGGCAAACTCAGCCTGCGCTGTTGACTGCATCTGTTGCGCTGT‑ATCGCGTATGGCAGCAGCAGGGCGGTAAAGCACCGGCAATGATGGCCGGTC‑ACAGCCTGGGGGAATACTCCCCGCTGGgtttg > 2:983984/1‑234 (MQ=255) gAGCT‑ATCCAATTGTCGAAGAAACGTTTGCTGAAGCTTCTGCGGCGCTGGGCTACGACCTGTGGGCGCTGACCCAGCAGGGGCCAGCTGAAGAACTGAATAAAACCTGGCAAACTCAGCCTGCGCTGTTGACTGCATCTGTTGCGCTGT‑ATCGCGTATGGCAGCAGCAGGGCGGTAAAGCACCGGCAATGATGGCCGGTC‑ACAGCCTGGGGGAATACTCCGCGCTGGTTTGCGCTGgt < 2:792940/238‑1 (MQ=255) ttGTCGAAGAAACGTTTGCTGAAGCTTCTGCGGCGCTGGGCTACGACCTGCGGGCGCTGACCCAGCAGGGGCCAGCTGAAGAACTGAATAAAACCTGGCAAACTCCGCCTGCGCTGTTGACTGCATCTGTTGCGCTGG‑TTCGCGAATGGCGGCAGCAGGGCGGTAAACCACCGGCAATGTTGG‑CGCTCGACAGCCTGGGGTAATACTCCGCGCTGGTTTACGCTGGTGCGATTGGTTTc > 1:972248/1‑239 (MQ=255) | ACCTCTGCGGCCTCTGTCCCGTGCGCGCTGGATGAAGCTGTACGCGACGGGCGCATTAAGCCGGGGCAGTTGGTTCTGCTTGAAGCCTTTGGCGGTGGATTCACCTGGGGCTCCGCGCTGGTTCGTTTCTAGGATAAGGATTAAAACATGACGCAATTTGCATTTGTGTTCCCTGGACAGGGTTCTCAAACCGTTGGAATGCTGGCTGATATGGCGGCGAGCT‑ATCCAATTGTCGAAGAAACGTTTGCTGAAGCTTCTGCGGCGCTGGGCTACGACCTGTGGGCGCTGACCCAGCAGGGGCCAGCTGAAGAACTGAATAAAACCTGGCAAACTCAGCCTGCGCTGTTGACTGCATCTGTTGCGCTGT‑ATCGCGTATGGCAGCAGCAGGGCGGTAAAGCACCGGCAATGATGGCCGGTC‑ACAGCCTGGGGGAATACTCCGCGCTGGTTTGCGCTGGTGTGATTGATTTC > NC_000913/1149581‑1150048 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |