Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 2,726,615 A→C 31.7% noncoding (2568/2904 nt) rrlG ← 23S ribosomal RNA of rrnG operon

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,726,6150AC31.7% 1.1 / 6.7 42noncoding (2568/2904 nt)rrlG23S ribosomal RNA of rrnG operon
Reads supporting (aligned to +/- strand):  ref base A (2/26);  new base C (2/12);  total (4/38)
Fisher's exact test for biased strand distribution p-value = 5.90e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

AGAACTCATCTCGGGGCAAGTTTCGTGCTTAGATGCTTTCAGCACTTATCTCT‑TCCGCATTTA‑GCTACCGGGCA‑GTGCCATTGGCATGACAACCCGAACACCAGTGATGCGTCCACTCCGGTCCTCTCGTACTAGGAGCAGCCCCCCTCAGTTCTCCAGCG‑CCCACGGCAGATAGGGACCGAACTGTCTCACGACGTTCTAAACCCAGCTCGCGTACCACTTTAAATGGCGAACAGCCATACCCTTGGGACCTACTTCAGCCCCAGGATGTGATGAGCCGACATCGAGGTGCCAAACACCGCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCTCGCGCCGTCACGCTCGCAGTCAAGC  >  NC_000913/2726397‑2726842
                                                                                                                                                                                                                              |                                                                                                                                                                                                                                   
gaaactctttccGGGTCAAGTTTCGTGTTTAGATGCTTTCACGACTTATCTCT‑TCCGCATTTA‑GCTAACGGGCA‑GTGCCTATGGCATGGAAACCCGAACACCATTGATGCGTCCCCGCCGGTCCTCTCGTACTAGGAGCAGCCCCCCTCAGTTCTCCAGCG‑CCCACGGCAGATAGGGACCGAACTGTCTCACGACGTTCTAAACCCAGCTCGCGTACCACTTTAAATGGCGAACAGcc                                                                                                                                                                                                                  <  1:980195/227‑1 (MQ=1)
  cacttttcgcGGGGAAATTTTCTTTCTTTGATGCTGTCAACACTTCACCCT‑TCCGCATTTA‑GCTACCGGGCA‑GTGCCATTGGCATGACAACCCGAACACCAGTGATGCGTCCACTCCGGTCCTCTCGTACTAGGAGCAGCCCCCCTCAGTTCTCCAGCG‑CCCACGGCAGATAGGGACCGAACTGTCTCACGACGTTCTAAACCCAGCTCGCGTTCCACTTTAAATGGCGAACAGCCAt                                                                                                                                                                                                                <  1:1272571/229‑1 (MQ=1)
      ctttgtgggaccaGTTTCGGGTGTAGGTGCTTTAAGCCCTTAGCCTC‑TCCGCATTGA‑GCACCCGGGCG‑GTGCCATTGGCATGACACCCCGAACACCAGGGATGGGTCCACTCCGGTCCGCTCGTACTAGGAGCAGCCCCCCTCAGTTTGCCAGCG‑CCCACGGCAGATAGGGACCGAACTGTCTCACGACGTTCTAAACCCAGCTCGCGTACCACTTTAAATGGCGAACAGCCATACCCt                                                                                                                                                                                                           <  1:554612/227‑1 (MQ=1)
        tctcGGGGCAAGTTTCGTGCTTAGATGCTTTCAGCACTTATCTCT‑TCCGCATTTA‑GCTACCGGGCA‑GTGCCATTGGCATGACAACCCGAACACCAGTGATGCGTCCACTCCGGTCCTCTCGTACTAGGAGCAGCCCCCCTCAGTTCTCCAGCG‑CCCACGGCCGCTAGGGACCGAACTGTCTCACGCCGTTTCAAACCCAGCTCGCCGCCCCCCTTAAAATGCGAAACACCACACCCttt                                                                                                                                                                                                         >  1:101718/1‑238 (MQ=1)
              ggcatattttGTGGTTAGGTTGTTTGAGCCGTTATCTCT‑CACCGATTTA‑GGTACGGGGCT‑GGTGCATCGGCGGGGCAGCCCCGACCCCGGTGATGCCTCCACTCCGGTCCCTCCGTACTAGGAGCGGCCCCCCTCGGTTCGCCAGCG‑CCCACGGCAGATAGGGACCGAACTGTCTCACGACGTTCTCAACCCCCCTCGCGTGCCACTTTAAATGGCGAACAGCCATACCCTTGGGAcc                                                                                                                                                                                                    <  1:247510/232‑1 (MQ=0)
                        gttcTTAGATGCTTTCAGCCCTTATCTCT‑TCCGCATTTA‑GCTACCGGGCA‑GTGCCATTGGCCTGACAACCCGAACACCAGTGATGCGTCCACTCCGGTCCTCTCGTACTAGGAGCAGCCCCCCTCAGTTCTCCAGCG‑CCCACGGCAGATAGGGACCGAACTGTCTCACGACGTTCTAAACCCAGCTCGCGTACCACTTTAAATGGCGAACAGCCATACCCTTGGGACCTACTTCAGccc                                                                                                                                                                                         <  2:904113/236‑1 (MQ=1)
                        cgcttttgATTCTTTCCCCACTT‑TCTCTGTCCGCATTTA‑GCGCCCGGGAA‑GTGCCATTGGCAGGACCACCCGAACCTCAGTGGTGCTTCCCCTCCGGTCCTCTAGTACGAGGAGCAGCCCCCCTGCGTTCTCCAGCG‑CCCACGGCAGAGAGGGACCGAACTGTCCCCCTACGTTCTAACCCCAGCTCGCGTCCCCCTTTAAATGGCGAACAGCCATACCCTTGGGACCTACGTCAGccc                                                                                                                                                                                         <  1:775585/232‑1 (MQ=1)
                         tgttttaattcTTTCCGCACTTATCTCT‑TCCCCATTTG‑GCTCCCGGGCA‑GGGCCATTGGCACGACACCCCGAACACCAGTGATGCGTCCACGCCGGTCCTCTCGTACTAGGAGCAGCCCCCCTCAGTTCTCCAGCG‑CCCACGGCAGATAGGGACCGAACTGTCTCACGACGTTCTAAACCCAGCTCGCGTACCACTTTAAATGGCGAACAGCCATACCCTTGGGACCTACTTCAGcccc                                                                                                                                                                                        <  1:4798/229‑1 (MQ=1)
                         ggcttgcaTGCTTTCAGCAGTTCTCTCT‑GCCCCATTTA‑GGTAGCGGGCC‑GTCCCATTTGGAGTACAACCCGAACACCAGTGCTGCGTCCGGCCCGGTCCTGCCGTACTAGGGGCAGCCCCCCTCAGTTCGCCAGCG‑CCCACGGCAGATAGGGACCGAACTGTCTCACGACGTTCTAAACCCGTCTCGCTTACCACTTTAAATGGCGAACAGCCATACCCTTGGGACCTACTTCAGcccc                                                                                                                                                                                        <  1:624939/232‑1 (MQ=1)
                         ggctgagatggtttcctaccTTCTCTCC‑TCCGCATTTAGGCTA‑CGGCCA‑GGGCCATTGGCATGACCACCCGGACACCAGGGATGCGTCCAACCCGGTCCTTGCGTACTAGGAGCAGCCCCCCTCAGTTCTCCAGCG‑CCCCCGGCAGATAGGGACCGAACTGTCTCACGACGTTCTAAACCCAGCTCGCGTACCACTTTAAATGGCGAACAGCCATACCCTTGGGACCTACTTCAGcccc                                                                                                                                                                                        <  1:1119111/220‑1 (MQ=1)
                            gtcggtgctttcatgttttttctct‑cCCCCATTTT‑CTTGCCGGGCT‑GTGCCAGTGGCATGACAACACGCACACCGGTTATGCGTCAACACCGGTCGTCTCGTACTAGGTGCAGCCCCCTTCAGTTCCGCAGCG‑CCCACGGCAGATAGCGACGGAACTGTCTCACGTCGTTCTAAACCCAGCTCGCGTACCACTTTAAATGGCGAACAGCCATACCCTTGGGACCTACTTCAGCTCCAgg                                                                                                                                                                                     <  1:113730/219‑1 (MQ=11)
                                     tttcatctctttcccctcccGCAATTG‑GCTACCGGGCATGTG‑CTGTGGCGTGACAGCCCGAACCCCAGTGATGCGGCCACCGCGGTCCTCTCGTACTAGGAGCAGCCCCCCTCAGGTCCCCAGCG‑CCCACGGCAGATAGGGCCCGAACTGTCTCGCGACGTTCTAAACCCAGCTCGCGTACCACTTTAAATGGCGAACAGCCATACCCTTGTGACCTACTGCAGCTCCAGGATGtgatg                                                                                                                                                                             <  1:197376/221‑1 (MQ=11)
                                                ttcttctccccttttA‑GCTCCCGGGCA‑GTGCCCTTGGCGTTGAACCCCGAACCCCAGGGATGCCTCCACTCCGGTCCTCTGGTACTAGGAGCAGCCCCCCTCAGTTCTCCAGCG‑CCCACGGCAGATAGGGACCGAACTGTCTCACGACGTTCTAAACCCAGCTCGCGTACCACTTTAAATGGCGAACAGCCATACCCTTGGGACCTACTTCAGCCCCAGGATGTGATGAGCCGACATCg                                                                                                                                                                  <  1:1215672/227‑1 (MQ=1)
                                                 gcttcgtccctatttaggctccGGGTA‑GTGCCGTTGGCATGAGCACCCGAACCGCCGTAGTGCGTTCACACCGGTCCTCCCGTCATAGGATCAGCCCCCCTCAGTTATCCAGCG‑CCCACGGCCGATAGGGACCGAACTGTCTCACGACGTTCTAAACCCAGCCCGCGTTCCACTTTAAATGGCGAACAGCCATGCCCTTGGGACCTACTTCAGCCCCAGGATGTGATGAGCCGACATCg                                                                                                                                                                  <  1:381252/219‑1 (MQ=1)
                                                              tcatctcccGGGCG‑GCGCCATTGGCATGACACCCCGACACCCAGGTGTGGGTACACTCCGGCCCTCGCGTACTAGGCGCAGCCCCCCTAAGTTCCCCAGCG‑CCCCCGGCAGACAGGGACCGAACTGTCTCACAACGTTCTAAACCCAGCTCGCGTACCACTTTAAATGGCGAACAGCCATACCCTTGGGACCTACTTCAGCCCCAGGATGTGATGAGCCGACATCGAGGTGCCAAacac                                                                                                                                                     <  1:984493/232‑1 (MQ=1)
                                                                    tccggggtggtcccATTGGCATCACCACCCGACCCCCGGTGATGCGTCCCCCCCGGTCCCCCCGTTCCAGGAGCCACCCCCCTCAGTCTTCCAGCC‑GCCACGGCAGATAGGGCCCGAACTGCCCCACGACGTTCTAAACCCAGCTCGCGTACCACTTTAAATGGCGAACAGCCATACCCTTGGGACCTACTTCAGCCCCAGGATGTGATGAGCCGACATCGAGGTGCCAAACAccgccg                                                                                                                                                <  1:343462/227‑1 (MQ=1)
                                                                                       cttgccaccccGAACCCCAGTGATCCGCCCACTCGGGTCCCCTCGTACTGGGGGCCGCCCCCCCCAGTTCTCCGGGG‑CCCACGGCAGATGGGGACCCAATGGTCCAACGACGTTCGAAACCCAGCTCGCGTACCACTTGAAAGGGCGAACAGCCATGCCCTTGGGACCTACTTCAGCCCCAGGATGTGATGAGCCGACAACGAGGTGCCAAACACCGCCGTCGATATGAACTCTTggg                                                                                                                              <  1:893481/230‑1 (MQ=1)
                                                                                        aTGACAACCCGAACACCAGTGATGCGTCCACTCCGGTCCTCTCGTACTAGGAGCAGCCCCCCTCAGTTCTCCAGCG‑CCCACGGCAGATAGGGACCGAACTGTCTCACGACGTTCTAAACCCAGCCCACGTACCCCTTTCAATGGCGAACAACCCTACCCTTGGGACCTACTTCAACACCCGGATGGATTGAGCCCGCACCCGGGGGCCAAACAccccccccgcatagaaccattggggg                                                                                                                            >  1:914257/1‑218 (MQ=1)
                                                                                             acccccacccccgttgttgtgTCCACCCCGGTCCTTTCTGAGAGGGGGCCGCCCCCCACATTTCACGAGCG‑CCCAGGGCAGATAGGGACCGAACTGGCTCACGACGTTCTAAACCCAGCTCGCGTACCCCTTTAAAGGGAGAACAGCCATACCCTTGGGACCTACTTCAGCCCCAGGATGTGATGAGCCGACATCTAGGTGCCAAACACCGCCGCCGATATGAACTCTTGTGCGGTagc                                                                                                                       <  1:158544/219‑3 (MQ=1)
                                                                                                    acaccttgtgtggtcccccTCCGTACCTCTGGTCCGAGGGGCCCCCCCCCTCTGTTCCCAAGGC‑CCCCCGGACGATAGGGACCGAACTGTCCCACGACGTTCTAACCCCAGCTCGCGTACCACTTTAAATGGCGAACAGCCATACCCTTGGGACCTACTTCAGCCCCAGGATGTGATGAGCCGACATCGAGGTGCCAAACACCGCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGt                                                                                                                <  1:1051299/221‑1 (MQ=1)
                                                                                                     ccccagtagttcgtcccccgcGGTCCTCTCGTACTAGGATCAGCCCCCCCCAGTTCTCCAGCG‑CCCCCGGCAGATAGGGACCGAACTGTCCCACGACGTTCTAAACCCAGCTCGCGTACCCCTTTAAATGGCGAACAGCCATACCCTTGGGACCTACTTCAGCCCCAGGATGTGATGAGCCGACATCGAGGTGCCAAACACCGCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGtt                                                                                                               <  2:966281/219‑1 (MQ=1)
                                                                                                          tggatgcttcccgcccGGTCCTCTCGTCCTGGGACGCTCCCCCCCCCGTTCTCCAGCG‑CCCACTGGAGATGGGGACCGAACTGTCTCCCGAGGTTATAAGTCCAGCTCCAGTACCCCTGTAAATGGCGACCAGCCATACCCTTGGGCCCTCCTTCAGCCCCAGGATGTGATGAGCAGACATCGAGGTGCCAAACACCGCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATccc                                                                                                          <  1:186509/225‑1 (MQ=1)
                                                                                                            gaggCGTCCACGCCGGGCCTCCCGTACTAGGAGCAGCCCCCCTCAGTTCCCCAGCG‑CCCACGGCAGATAGGGACCGAACTGTCTCACGACGTTCTAAACCCAGCTCGCGTACCACTTTAAATGGCGAACAGCCATACCCTTGGGACCTACTTCAGCCCCAGGATGTGATGAGCCGACATCGAGGTGCCAAACACCGCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATccc                                                                                                          <  2:276117/234‑1 (MQ=0)
                                                                                                                 cgccccccccgTCCTCTCCTACTTGGGCCCGGCCCCCACAG‑CCTCCCCCGCCCCACGGAAGGTAGCACCCAAACTGGCACACGGCTTTCTAACCCCACCTCGCGTACCACTGTAAATGGCAACCCGCCAGACCCCTGGTACCTACTTCATCCCCAGGATTGGATGGGCTGACATCGAGGTGCCAAACACCGCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGt                                                                                                    <  1:142931/228‑1 (MQ=0)
                                                                                                                                   ttcccacgggccgcCCCCCTCAGTCTTCCACGC‑CCCCCGTCAGCTAGGGACCGACCGTCCTCCCGACTTTCCAAACCCAGCTCTCGTCCCACTATAAATGGCGAACCGCCATGCCCTTGGGACCTACTTCAGCCCCAGGATGTGATGAGCCGACATCGAGGTGCCAAACACCGCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTTATCCGTTGAGCg                                                                                 <  1:365401/227‑1 (MQ=1)
                                                                                                                                   gaaccaGGGGCAGCCCCCCTCAGTTCCCCAGCG‑CCCACGGCAGATAGGGACCGAACTGTCCCACGACGTTCTAACCCCAGCCCGCGTCCCACTTTAAATGGCGAACAGCCATACCCTTGGGACCTACTTCAGCCCCAGGATGTGATGAGCCGACATCGAGGTGCCAAACACCGCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTTATCCGTTGAGCg                                                                                 <  2:766867/234‑1 (MQ=0)
                                                                                                                                                 cccccccctttCCCCAGCC‑CCCCCCGCAACTAGGGACCAACCTTGCCCCCGCCGTTCTAACCCCAGCCCCGTTCCCCCTTTAAATGGCGAAAAGCCATCCCCTTGGGACCTACTTCAGCCCCAGGATGTGATGAGCCGACATCGAGGTGCCAAACACCGCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTTATCCGTTGAGCGATGGCCCTTCCAtt                                                                   <  1:1033485/230‑1 (MQ=1)
                                                                                                                                                        ggtttcccccgccccccgggCAAATAGGGGCCGAACTGTCCCCGGCCGTTTTAAACCCACCCCGCTAACCCTTTTAAAGGCCGAACAGCCATACCCTTGGGACCTACTTCAGCCCCAGGATGTGATGAGCCGACATCGAGGTGCCAAACACCGCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAac                                                             <  1:785029/221‑1 (MQ=1)
                                                                                                                                                        cctttccccgcccccccctgCAGATCGGGCCCGACCTGCCTCACGCCGTTCTAACCCCACGCCGCGTACCCCTTTAAATGGCGAACAGCCAGACCCTTGGGACCTACTTCAGCCCCAGGATGGGATGGGCCCGCATCGAGGTGCCAAACACCGCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAac                                                             <  1:1124319/220‑1 (MQ=1)
                                                                                                                                                          ttctccccgccccccCGGCGGATAGGGCCCGAATGTTCTCCCGAGCTTCAAACCCCAGCCCGCGTCCCACTTAAAATGGCGAACAGCCATACCCTTGGGCCCTACTTCAGCCCCAGGATGTGATGAGCCGACATCGAGGTGCCAAACACCGCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAacca                                                           <  1:903596/228‑1 (MQ=1)
                                                                                                                                                           tccccAGCG‑CCCACGGCAGATAGGGACCGAACTGTCTCACGACGTTCTAAACCCAGCTCGCGTACCACTTTAAATGGCGAACAGCCATACCCTTGGGACCTACTTCAGCCCCAGGATGTGATGAGCCGACATCGAGGTGCCAAACACCGCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAacca                                                           <  2:1203410/234‑1 (MQ=1)
                                                                                                                                                            tcccctgccccccCGGCGTATAGGGCCCGACCGGTGCCCCGGCTTTCGAACCCCACCTCGTGTCCCCATTTAAAGGGGAGACCGCCATACCCTTGGGACCTACTTCAGCCCAAGGATGTGATGAGCCGACATCGAGGTGCCAAACACCGCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAaccacc                                                         <  1:830965/230‑1 (MQ=1)
                                                                                                                                                               cccgcccccACGGCGGAGAGTGACAGAAAGTCCTCACGAGGTTCCAAACCAGGCGCGCGTACCACTTTAAAGGGCGAACAGCCATACCCTTGGGACCGCCGTCAGCCCCAGGATGTGATGAGCCGACATCGAGGTGCCAAACACCGCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGa                                                      <  1:640978/233‑1 (MQ=1)
                                                                                                                                                               cccgcacccACGACAGATGGGGACCGAACTGTCCCACGACGTTCTAAACCCAGCTCCGGTCCCACTTTAAATGGCGAACAGCCATCCCCTTGGGACCTACTTCAGCCCCAGGATGTGATGAGCCGACATCGAGGTGCCAAACACCGCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGa                                                      <  2:690781/233‑1 (MQ=1)
                                                                                                                                                               ccccccccccggccaggtggggCCCGAACTGTCTCACGGCGTTCAAACCCCCGCCCGCGTACCCCTTTAAATGGCGAACAGCCATACCCTTGGGACCTACTTCAGCCCCAGGATGTGATGAGCCGACATCGAGGTGCCAAACCCCGCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGa                                                      <  1:1036678/220‑1 (MQ=1)
                                                                                                                                                                                         aaCTGTCTCACGACGTTCTAAACCCAGCTCGCGTACCACTTTAAATGGCGAACAGCCATACCCTTGGGACCTACTTCAGCTCCAGGATGTGATGAGCCGACATCGCGGTGCCAAACACCGCCGTCGATATGAACTCTTGGGCCGGATCAGCCTGTTATCCCAGGCACACCTTTTATCCGCTTGGAGATGGTCCTTCCTTTCAGAATCACCGGATAAcaacaaatcgcatcgccaccat                             >  1:362442/1‑217 (MQ=11)
                                                                                                                                                                                              tctcACGACGTTCTAAACCCAGCTCGCGTACCACTTTAAATGGCGAACAGCCATACCCTTGGGACCTACTTCAGCCCCAGGATGTGCAGAGCCGACACCGAGGTGCCAAACACCGCCGTCGATATGAACTCTTTGGCGGTATCCGCCTGTTATCCCCGGAGTACCTTTTATCCGTTGAGCCATGACCCTTCCCTTCCGAACGACCGATTCACCAtaccaggctttgccaatggcccgc                        >  1:731267/1‑215 (MQ=1)
                                                                                                                                                                                              tcccACGACGTTCTAACCCCAGTTCGCGTACCCCTTGAAATGGCGAACAGCCATACCCTTGGGACCTACTTCAGCCCCAGGATGTGATGAGCCGACATCGAGGTGCCAAACACCGCCGTCGATATGAACTCTTGGGCGGTATCAGCCt                                                                                                                  <  1:261177/145‑1 (MQ=1)
                                                                                                                                                                                              tcccACGACGTTCTAAACCCAGCCCGCGTACCCCTTTAAATGGCGAACAGCCATACCCTTGGGACCTACTTCAGCCCCAGGATGTGATGAGCCGACATCGAGGTGCCAAACACCGCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCTcgcg                       <  2:1126496/236‑1 (MQ=1)
                                                                                                                                                                                               ctgacgccgTTCTAAACCCAGCTCGCGTACCCCTTTAAATGGCGAACAGCCATACCCTTGGGCCCTACTTCAGCCCCAGGATGTGATTAGCCGACATCGAGGTGCCAAACACCGCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCTcgcg                       <  2:809374/235‑1 (MQ=0)
                                                                                                                                                                                                                   gcccgcgTACCACTTTAAATGGCGAACAGCCATACCCTTGGGACCTACTTCAGCCCCAGGATGTGATGAGCCGACATCGAGGTGCCAAACACCGCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCTCGCGCCGTCACGCTCGCAGTCAAGc  <  2:313483/236‑1 (MQ=1)
                                                                                                                                                                                                                   caccgcgatccACTTGAAATGCGGAACAGCCATGCCCTTGGGACCTACTTCAGCCCGAGGATGTGATGAGCCGACATCGAGGTGCCAAACCCCGCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCTCGCGCCGTCACGCTCGCAGTCAAGc  <  2:267400/230‑1 (MQ=1)
                                                                                                                                                                                                                              |                                                                                                                                                                                                                                   
AGAACTCATCTCGGGGCAAGTTTCGTGCTTAGATGCTTTCAGCACTTATCTCT‑TCCGCATTTA‑GCTACCGGGCA‑GTGCCATTGGCATGACAACCCGAACACCAGTGATGCGTCCACTCCGGTCCTCTCGTACTAGGAGCAGCCCCCCTCAGTTCTCCAGCG‑CCCACGGCAGATAGGGACCGAACTGTCTCACGACGTTCTAAACCCAGCTCGCGTACCACTTTAAATGGCGAACAGCCATACCCTTGGGACCTACTTCAGCCCCAGGATGTGATGAGCCGACATCGAGGTGCCAAACACCGCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCGGAGTACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCTCGCGCCGTCACGCTCGCAGTCAAGC  >  NC_000913/2726397‑2726842

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑