| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,950,171 | A→G | 20.5% | E311G (GAG→GGG) | argA → | amino acid N‑acetyltransferase and inactive acetylglutamate kinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,950,171 | 0 | A | G | 20.5% | 124.8 / 5.5 | 56 | E311G (GAG→GGG) | argA | amino acid N‑acetyltransferase and inactive acetylglutamate kinase |
| Reads supporting (aligned to +/- strand): ref base A (3/40); new base G (9/3); total (13/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.33e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTTTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGATGGAAAGCGCCGAGCAGATTCGTCGCG‑CAACAATCAACGATATTGGCGGTATTCTGGAGTTGATTCGCCCACTGGAGCAGCAAGGTATTCTGGTACGCCGTTCTCGCGAGCAGCTGGAGATGGAAATCGACAAATTCACCATTA‑TTCAGCGCGATAACACGAC‑TATTGCC‑TGCGCCGCGCTCTATCC‑G‑TTCCCGGAAGAGAAGA‑TTGGGGAAATGGCCTGTGTGGCAGTTCACCCGGATTACCGCAGTTCATCAAGGGGTGAAGTTCTGCTGGAACGCATTGCCGCTCAGG > NC_000913/2949938‑2950404 | ggTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTTTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGATGGAAAGCGCCGAGCAGATTCGTCGCG‑CAACAATCAACGATATTGGCGGGATTTTGGGGTTgt > 2:96078/1‑238 (MQ=255) aaaaaGCCCCGGAAGGGGAAGGCGATTACAACTCCGGTACGGTGCGCTTTGTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGGTGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGGGATGGAAAGCGCCGAGCAGATTCGTCGCG‑CAACAATCAACGATATTGGCGGTATTCTGGAGTTGAt < 2:832942/235‑1 (MQ=255) aaGCCCAGGAAGAGAAAGGCGATTACAACCCCGGTACGGTGCGCTTTTTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGATGGAAAGCGCCGAGCAGATTCGTCGCG‑CAACAATCAACGATATTGGCGGTATTCTGGAGTTGATTCGc < 2:364835/239‑1 (MQ=255) atcccGGGTAGAGAAAGGCGATTACCACGCCGGTATGGTGCGCTTTTTGCGTGGCCCAGTGAAAGCCTGCCGCAGCGGCGTGCGGCGATGTTATTTAATCAGTTACCAGGAAGATGGCGTGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGATGGAAAGCGCCGAGCAGATTCGTCGCG‑CAACAATCAACGATATTGGCGGTATTCTGGAGTTGATTCGcc < 1:316794/237‑1 (MQ=255) aGCCCGGGAAGAGAAAGGCGTGTCCACCGCCGGTCCGGGGCGCTGTGTGGGTCGCGAAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTTCGCAGATTGTGATGGAAAGCGCCGAGCAGATTCGTCGCG‑CAACAATCAACGATATTGGCGGTATTCTGGATTTGATTCGcc < 1:1156613/239‑1 (MQ=255) gCCCAGGAAGAGAAAGGGGTTTACCCCCCCGGTTCGGTGCGTTTTTTGCGTGGCCCAGTGAAAGCCTGGCGCAGCGGCGTGCGTCGCTGTCATTTAAGCAGGTAGCAGGAAGATGGCGCGCTGTGGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGATGGAAAGCGCCGAGCAGATTCGTCGCG‑CAACAATCAACGATATTGGCGGTATTCTGGAGTTGATTCGcc < 1:498364/238‑1 (MQ=255) ggAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTTTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGCAGATGGCGCGCTGTTGCAGAAGTTGTTCTCACCCACCGGGATCGGTACGCCGTTTGGGATGCAAAACGCCAAG‑ACAATCCGCGCGCCAACAACCAAAGAAATTGGCGGTGTTTTGGGGtggtgttagcccccgg > 1:1139099/1‑224 (MQ=255) agaAAGGGCGTTGCAACCCCGGTACGGTGGTCTTTTTGCGGTGGGGAGGGAAAGCCTGGCGCAGGGGCGTGGGGCGCTGGCATTTAATCAGTTGTCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGATGGAAAGCGCCGAGCAGATTCGTCGCG‑CAACAATCAACGATATTGGCGGTATTCTGGAGTTGATTCGCCCACTGGagca < 1:1261064/238‑1 (MQ=255) aaaGGCGATTACAACTCCGGTACGGTTCCCTTTCTGGGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGATGGAAAGCGCCGAGCAGATTCGTCGCG‑CAACAATCAACGATATTGGCGGTATTCTGGAGTTGATTCGCCCACTGGAgcagca < 2:865964/239‑1 (MQ=255) aaaGGCGATTACAACTCCGGTACGGTGCGCTTTTTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGATGGAAAGCGCCGAGCAGATTCGTCGCG‑CAACAATCAACGCTATTGGCGGTATTTTGGGGTTTGTTCGCCCCCTGTagacgcc > 2:368809/1‑234 (MQ=255) aaGGGGATTCCAACTCCGGTACGGTGCGGTTTTTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGATGGAAAGCGCCGAGCAGATTCGTCGCG‑CAACAATCAACGATATTGGCGGTATTCTGGAGTTGATTCGCCCACTGGAgcagca < 2:1136547/238‑1 (MQ=255) aaGGCGATTCAACCTCCGTTAGGGGGCGTTTTTTGGGTGGCGCGGGGAAAGCCTGCCGCACGGGGGTGCGTCCCTGTCATTTAAGCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTAGCGGTACGCAGATTGTGATGGAAAGCGCCGAGCAGATTCGTCGCG‑CAACAATCAACGATATTGGCGGTATTCTGGAGTTGATTCGCCCACTGGAgcagca < 1:546421/238‑1 (MQ=255) aaGGCGATTACAACTCCGGTACGGTGCGCTTTTTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGATGGAAAGCGCCGAGCAGATTCGTCGCG‑CAACAATCAACGATATTGGCGGTATTCTGGAGTTGATTCGCCCACTGGAgcagca < 2:878838/238‑1 (MQ=255) cggttgcagttCCGGTACGTTGCGTTTTTTGCGGGGCGCGGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGGCATTTAATCAGTTATCAGGAATATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGATGGAAAGCGCCGAGCAGATTCGTCGCG‑CAACAATCAACGATATTGGCGGTATTCTGGAGTTGATTCGCCCACTGGAGCAGCAAgg < 1:96078/227‑1 (MQ=255) aTTACAACTCCGGTACGGTGCGCTTTTTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGATGGAAAGCGCCGAGCAGATTCGTCGCG‑CAACAATCAACGATATTGGCGGGATTCTGGGGTTTGGTTGCCCACCTGGGCAGCAAggggtt > 2:643421/1‑235 (MQ=255) tGCGCTTTTTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGATGGAAAGCGCCGAGCAGATTCGTCGCG‑CAACAATCAACGATATTGGCGGTATTCTGGGGGTTATTTGCCCCACGGCGGAGCAAGGTATTCTGGTATGCCCtttt > 2:1042750/1‑234 (MQ=255) cgcTTTTTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGATGGAAAGCGCCGAGCAGATTCGTCGCG‑CAACAATCAACGATATTGGCGGGATTCTTGAGGTGATTCTCCCCCCGGGGCAGCAAGGGAGTCtttgaagcccgttccccc > 2:270929/1‑221 (MQ=255) ttGCGTGGCGCAGTGAAAGCCTGCCGCAGGGGCGTGCGTCCGTGTCATTTAAGCAGTTATCAGGAAGGTGGCGCGCGGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGATGGAAAGCGCCGAGCAGATTCGTCGCG‑CAACAATCAACGATATTGGCGGTATTCTGGAGTTGATTCGCCCACTGGAGCAGCAAGGTATTCTGGTACGCCGTTCTCGCGAGCAGCt < 2:692531/239‑1 (MQ=255) tGCGGGGCGCAGTGAAAGCCGGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGATGGAAAGCGCCGAGCAGATTCGTCGCG‑CAACAATCAACGATATTGGCGGTATTCTGGAGTTGATTCGCCCACTGGAGCAGCAAGGTATTCTGGTACGCCGTTCTCGCGAGCAGCTg < 2:584268/239‑1 (MQ=255) cGTGGCGTAGTGAAACCCTG‑‑GCAGCGCGGTGCGTCGCTGTCATTTAAGTGGTTAGCTGTAATATGGCGCGCTGTTGCAAGATTTGCTCCCACGCGACGGTATCGGTACACAGATTGTGATGGAAAGCGCCGATCAGATTCGTCCCG‑CAACAATCAATGATATTGGCGGTATTCTCGAGTTGATTCGCGCTCTGGAGCAGCAAGGTACTCTGGTACGCCGTTCTCGCGAGCAGCTGgaga < 1:19445/239‑1 (MQ=255) tgcgggtgtggcgtgcgggtgtGTCATTTAATCTATGTGCAGGAAGGTGGTGCGCTGTTGGAAGAGTTGTTCTCCCGGGACGGTATCGGTACGCAGATTGTGATGGAAATCGGCGGGCAGTTTCGGCGGC‑GAACAATCATCGGTATTGGCGGTATTCTGGAGTTGATTCGCCCACTGGAGCAGCAAGGTATTCTGGTACGCCGGTCTCGCGAGCAGCTGGAGATGGAAATCGACAAAtt < 1:970020/218‑1 (MQ=255) tGCCGCAGGGGCGTGCGTCGCTGGCATTTAATCAGTTAACAGGAAGATGGCGCGCTGTTGCAAGAGTTGGTCTCACGCGACGGTAGCGGTACGCAGATTGTGATGGAAAGCGCCGAGCAGATTCGTCGCG‑CAACAATCAACGATATTGGCGGTATTCTGGAGTTGATTCGCCCACTGGAGCAGCAAGGTATTCTGGTACGCCGTTCTCGCGAGCAGCTGGAGATGGAAATCGACAAAtt < 2:276355/239‑1 (MQ=255) tGCCGCAGCGGGCTGCGTCGCTGTCATTTAATCAGTTACCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGATGGAAAGCGCCGAGCAGATTCGTCGCG‑CAACAATCAACGATATTGGCGGTATTCTGGAGTTGATTCGCCCACTGGAGCAGCAAGGTATTCTGGTACGCCGTTCTCGCGAGCAGCTGGAGATGGAAATCGACAAAtt < 2:1079236/239‑1 (MQ=255) ccGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGATGGAAAGCGCCGAGCAGATTCGTCGCG‑CAACAATCAACGATATTGGCGGCATTCTTGGGTTGATTCTGCCACCGGAGCAGCAAGGTATTCtt > 2:42418/1‑192 (MQ=255) gCAGTGGCATGCGTCGCTGGCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGGGATGGAAAGCGCCGAGCAGATTCGTCGCG‑CAACAATCAACGATATTGGCGGTATTCTGGAGTTGATTCGCCCACTGGAGCAGCAAGGTATTCTGGTACGCCGTTCTCGCGAGCAGCTGGAGATGGAAATCGACAAATTCAcc < 2:915692/239‑1 (MQ=255) tCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGATGGAAAGCGCCGAGCAGATTCGTCGCG‑CAACAATCAACGATATTGGCGGTATTCTGGAGTTGATTCGCCCACTGGAGCAGCAAGGTATTCTGGTACGCCGTTCTCGCGAGCAGCTGGAGATGGAAATCGACAAATTCACCATTA‑TTCAgcgc < 2:388219/238‑1 (MQ=255) ttATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGATGGAAAGCGCCGAGCAGATTCGTCGCG‑CAACAATCAACGATATTGGCGGTATTCTTGGGTTGATTTGCCCACCTGCGCCGCCAGGTATTCTGGTACGCCGTTCTCCCGCGCAGCTGGGGATTGGAATCGACAAATTTACCCTTA‑TTTAGCGCGATAAAACGAC‑TATTTcc > 2:1018675/1‑238 (MQ=255) aGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGATGGAAAGCGCCGAGCAGATTCGTCGCG‑CAACAATCAACGATATTGGCGGTATTCTGGAGTTGATTCGCCCACTGGAGCAGCAAGGTATTCTGGTACGCCGTTCTCGCGAGCAGCTGGAGATGGAAATCGACAAATTCACCATTA‑TTCAGCGCGATAACACGAC‑TATTGCC‑TGcgcc < 2:493471/239‑1 (MQ=255) gAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGATGGAAAGCGCCGAGCAGATTCGTCGCG‑CAACAATCAACGATATTGGCGGTATTCTGGAGTTGATTCGCCCACTGGAGCAGCAAGGTATTCTGGTACGCCGTTCTCGCGAGCAGCTGGAGATGGAAATCGACAAATTCACCATTA‑TTCAGCGCGATAaca < 2:895469/220‑1 (MQ=255) agtgtGGCGCTCTGTTGTAAGCGTTTTTCTCACGGGACGGGCTCGGTAGGCTGATTGTGATGGAAAGCGCCGTTCAGTTGCGTCGAG‑CAATAATCAACGGTAGTGGCCGTATTCTGGAGTTGATTCGCCCACTGGAGCAGCAAGGTATTCTGGTACTCCGTTCTCGCGAGCAGCTGGAGATGGAAATCGACAAATTCTCCACTC‑TTCAGCGCGATAACACGAC‑TATTGCC‑TGcgcc < 1:623348/232‑1 (MQ=255) gATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGATGGAAAGCGCCGAGCAGATTCGTCGCG‑CAACAATCAACGATATTGGCGGGATTCTTGCGTTGATTCGCCCACTCGCGCAGCAACGGATTCTGCGACGCCGCTTTCGTGGCGCGCTGGGGGTGGGAAAACACAAAATCACCATTA‑TTCTCCGCGGTAAcaccacaaatatccgcggcgcgg > 1:296803/1‑221 (MQ=255) cgcgcTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGATGGAAAGCGCCGAGCAGATTCGTCGCG‑CAACAATCAACGATATTGGCGGTATTCTGGGGTTGATTTGCCCCCCGGAGCAGCAAGGGATTCTTGTACGCCGTTCTCGCGGGCAGCCGGAGATGGAAATTGACAAATTCACCCTTT‑TTCAGCGCGATAAAACCGC‑CATTGAC‑Tggcacaggccccta > 2:368667/1‑225 (MQ=255) cgcTGTTGCAAGGTTTGTTTTCACGGGCCGGTATCGGTTAGCGAGTTGGGAAGGAAAGGCCCGGGCAGGTTCGTCGCG‑GAACAAGCAACGATGATGGCGGTATTCTGGAGTTGATTCGCCCACTGGAGGAGCAATGTATGCTGGTTCGCCGTTCGCGCGAGCAGCTGGAGATGGAAATCGACAAATTCACCATTA‑TTCAGCGCGATAACACGAC‑TATTGCC‑TGCGACGCGCTCTATcc < 1:550897/238‑1 (MQ=255) tGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGATGGAAAGCGCCGAGCAGATTCGTCGCG‑CAACAATCAACGATATTGGCGGTATTCTGGAGTTGATTCGCCCACTGGAGCAGCAAGGTATTCTGGTACGCCGTTCTCGCGAGCAGCTGGAGATGGAAATCGACAAATTCACCATTA‑TTCAGCGCGATAACACGAC‑TATTGCC‑TGCGCCGCGCTCTATCC‑G‑TTCCCg < 2:1105660/239‑1 (MQ=255) gttgttCTCACGCGACGGTATCGGTACGCAGATTGGGATGGAAAGCGCCGAGCAGATTCGTCGCG‑CAACAATCAACGATATTGGCGGTATTCTGGAGTTGATTCGCCCACTGGAGCAGCAAGGTATTCTGGTACGCCGTTCTCGCGAGCAGCTGGAGATGGAAATCGACAAATTCACCATTA‑TTCAGCGCGATAACACGAC‑TATTGCC‑TGCGCCGCGCTCTATCC‑G‑TTCCCGgaagag < 2:596445/238‑1 (MQ=255) gttggtCCCCCGCGCCGGTATCGGTACGCAGATTGTGAAGGAAAGCGCCGAGCAGATTCGTCGCG‑CAACAATCAACGATATTGGCGGTATTCTGGAGTTGATTCGCCCACTGGAGCAGCAAGGTATTCTGGTACGCCGTTCTCGCGAGCAGCTGGAGATGGAAATCGACAAATTCACCATTA‑TTCAGCGCGATAACACGAC‑TATTGCC‑TGCGCCGCGCTCTATCC‑G‑TTCCCGgaagag < 2:762097/238‑1 (MQ=255) ttgttCTCACGCGGCGGTATCGGTACGCAGATTGGGATGGAAAGCGCCGAGCAGATTCGTCGCG‑CAACAATCAACGATATTGGCGGTATTCTGGAGTTGATTCGCCCACTGGAGCAGCAAGGTATTCTGGTACGCCGTTCTCGCGAGCAGCTGGAGATGGAAATCGACAAATTCACCATTA‑TTCAGCGCGATAACACGAC‑TATTGCC‑TGCGCCGCGCTCTATCC‑G‑TTCCCGgaagaga < 2:564500/238‑1 (MQ=255) ttCTCACACGCCGGTTTCGGTACGCAGATTGTGTTGGAACTCGCCGATCAGTTTCGTCGTG‑CAACAAACAACGGTATGTGCGGTAGTCTGGAGTGGAGTAGCTGACTGGAGCAGAAAGGTATTTTGGTTCGCCGTTCTCGCGAGCAGCTTGAGATTGAAATCGACAAATTCACCATTA‑TTCAGCGCGATAACACGAC‑TATTGCC‑TGCGCCGCGCTCTATCC‑G‑GTCCCGGAAGAGAAGA‑t < 1:592027/239‑1 (MQ=255) tctccgggtcggtttgtgttccgaGATTGTGAGGGAAAGGCCCGGGCAAGTTCGTGCCG‑CAAAAATCCACGATATTGGCGGTATTCTGGAGTTTATTCGCCCACTGGAGCAGCAAGGTATTCTGGTACGCCGTTCTCGCGAGCAGCTGGAGATGGAAATCGACAAATTCACCATTA‑TTCAGCGCGATAACACGAC‑TATTGCC‑TGCGCCGCGCTCTATCC‑G‑TTCCCGGAAGAGAAGA‑TTg < 1:643421/216‑1 (MQ=255) ctcACGCGCCGGTTTCGGTACGTAGATTTGGATGGAAAGCGCCGAGCAGGTTCGTCGCG‑GAACAATCAACGATATTGGCCGTATTCTGGAGTTGATTCGCCCACTGGAGCAGCAAGGTATTCTGGTACGCCGTTCTCGCGAGCAGCTGGAGATGGAAATCGACAAATTCACCATTA‑TTCAGCGCGATAACACGAC‑TATTGCC‑TGCGCCGCGCTCTATCC‑G‑TTCCCGGAAGAGAAGA‑TTg < 2:554754/239‑1 (MQ=255) gTACGCAGATTGTGATGGAAAGCGCCGAGCAGATTCGTCGCG‑CAACAATCAACGATATTGGCGGTATTCTGGAGTTGATTCGCCCACTGGAGCAGCAAGGTATTCTGGTACGCCGTTCTCGCGAGCAGCTGGAGATGGAAATCGACAAATTCACCATTA‑TTCAGCGCGATAACACGAC‑TATTGCC‑TGcgccg < 2:1000315/192‑1 (MQ=255) cGCAGATTGTGATGGAAAGCGCCGAGCAGATTCGTCGCG‑CAACAATCAACGATATTGGCGGGATTGTTGAGGTTGTTTGGCCACCGGGGCAGCAAGGGATTCTGTGGTACCGTTCTCGCCGGCAGCCGGAGACGGATATTGCACAATTCACCATCATTTTAGC‑CGCAAACAGGAC‑CATTTCCTTGCGCGCCGC‑CTATCC‑GCTTCCCGG‑AGAGAAGACTGGGGGAAATTCCCTGTggggg > 1:982817/1‑238 (MQ=255) attggtaTGGAAAGCGCCGAGCAGATTCGTCGCG‑CAACAATCAACGATATTGGCGGTATTCTGGAGTTGATTCGCCCACTGGAGCAGCAAGGTATTCTGGTACGCCGTTCTCGCGAGCAGCTGGAGATGGAAATCGACAAATTCACCATTA‑TTCAGCGCGATAACACGAC‑TATTGCC‑TGCGCCGCGCTCTATCC‑G‑TTCCCGGAAGAGAAGA‑TTg < 2:242047/208‑1 (MQ=255) aaaGCGCCGAGCAGATTCGTCGCG‑CAACAATCAACGATATTGGCGGGTTTTTGGGGGTGATTCGCCCACCGGGGCAGCAAGGGATTTTGGTACACCGTTCTCGCGAGCAGCCGTGGATGGGAAATGACCAATTTACCACTA‑TTTATCGCGGTAAAAAGGA‑CATTTCC‑TGCGCCCGCCTCCATCCTG‑TGCCCGAAGAAAAACA‑TTTGGGAAAAGCCCTGGGGGGGGGTTCCCCCgagaa > 1:452476/1‑234 (MQ=255) agggcCGAGCAGATTCGTCGCG‑CAACAATCAACGATATTGGCGGTATTCTGGAGTTGATTCGCCCACTGGAGCAGCAAGGTATTCTGGTACGCCGTTCTCGCGAGCAGCTGGAGATGGAAATCGACAAATTCACCATTA‑TTCAGCGCGATAACACGAC‑TATTGCC‑TGCGCCGCGCTCTATCC‑G‑TTCCCGGAAGAGAAGA‑TTGGGGAAATGGCCTGTGTGGCAGTTCACCCGGATTACCg < 2:1053250/236‑1 (MQ=255) gcgcCGAGCAGATTCGTCGCG‑CAACAATCAACGATATTGGCGGTATTCTGGATTTGATTCGCACACTGGAGCAGCAAGGTATTCTGGTACGCCGTTCTCGCGAGCAGCTGGAGATTGAAATCGACAAATTCACCATTA‑TTCAGCGCGATAACACGAC‑TATTGCC‑TGCGCCGCGCTCTATCC‑G‑TTCCCGGAAGAGAAGA‑TTGGGGAAATGGCCTGTGTGGCAGTTCACCCGGATTACCg < 2:1134883/238‑1 (MQ=255) cgcgCAGATTCGTCGCG‑CAACAATCAACGATATTGGCGGTATTCTGGAGTTGATTCGCCCACTGGAGCAGCAAGGTATTCTGGTACGCCGTTCTCGCGAGCAGCTGGAGATGGAAATCGACAAATTCACCATTA‑TTCAGCGCGATAACACGAC‑TATTGCC‑TGCGCCGCGCTCTATCC‑G‑TTCCCGGAAGAGAAGA‑TTGGGGAAATGGCCTGTGTGGCAGTTCACCCGGATTACCGCAGt < 2:1006467/235‑1 (MQ=255) ttCGTCGCG‑AAACAATCAACGATATTGGCGGTATTCTGGGGTTGATTCGCCCACTGGAGCAGCAAGGTATTCTGGTACGCCGTTCTCGCGAGCAGCTGGAGATGGAAATCGACAAATTCACCATTA‑TTCAGCGCGATAACACGAC‑TATTGCC‑TGCGCCGCGCTCTATCC‑G‑TTCCCGGAAGAGAAGA‑TTGGGGAAATGGCCTGTGTGGCAGTTCACCCGGATTACCGCAGTTCATCAAg < 2:550765/238‑1 (MQ=255) tcgCG‑CAACAATCAACGATATTGGCGGTATTCTGGAGTTGATTCGCCCACTGGAGCAGCAAGGTATTCTGGTACGCCGTTCTCGCGAGCAGCTGGAGATGGAAATCGACAAATTCACCATTA‑TTCAGCGCGATAac < 2:569488/136‑1 (MQ=255) cgcg‑CAACAATCAACGATATTGGCGGTATTCTGGAGTTGATTCGCCCACTGGAGCAGCAAGGTATTCTGGTACGCCGTTCTCGCGAGCAGCTGGAGATGGAAATCGACAAATTCACCATTA‑TTCAGCGCGATAACACGAC‑TATTGCC‑TGCGCCGCGCTCTATCC‑G‑TTCCCGGAAGAGAAGA‑TTGGGGAAATGGCCTGTGTGGCAGTTCACCCGGATTACCGCAGTTCATCAAGGGGTGa < 2:296803/239‑1 (MQ=255) aTCAACGATATTGGCGGTATTCTGGAGTTGAGTCGGCCACCGGAGCAGCAAGGGATTCCGGGACCCCCTTCTCGCCGGCCGCTGGGGGGGGGAATCAGAAAATTTCCCACTA‑TTCAGCGCGGGCACACGACATTTTCCC‑TGC‑CCGCCCCCCACTC‑G‑ATCCCGGCAG‑GCAGAGTTGGTGGAAAGGCCCGGCTGGCCGTTTACCCGCATTTACGCAGTTCCTCAAgcgggaagagtcg > 1:817391/1‑227 (MQ=255) tCAACGATTTTGGCGGTAGTCTGGAGTTGAGTCGCCCACTGGAACAGCAAGGTAGTCTGGTACGCCGTTCTCGCGAGCAGCTGGAGATGGAAATCGACAAATTCACCATTA‑TTCAGCGCGATAACACGAC‑TATTGCC‑TGCGCCGCGCTCTATCC‑G‑TTCCCGGAAGAGAAGA‑TTGGGGAAATGGCCTGTGTGGCAGTTCACCCGGATTACCGCAGTTCATCAAGGTGTGAAGTTctgctg < 2:958346/239‑1 (MQ=255) tatTGGCGGTATTCTGGAGTTGATTCGCCCACTGGAGCAGCAAGGTa < 1:562753/47‑1 (MQ=255) gggaTTCTGGGGTTGATTCGCCCACTGGAGCAGCAAGGTATTGTGGTACGCCGTTCTCGCGAGCAACTGGAGATGGAAATCGACAAATTC‑CCATTA‑TTCAGCGCGATAACACGAC‑TATTGCC‑TGCGCCGCGCTCTATCC‑G‑TTCCCGGAAGAGAAGA‑TTGGGGAAATGGCCTGTGTGGCAGTTCACCCGGATTACCGCAGTTCATCAAGGGGTGAAGTTCTGCTGGAACGCATTGCCGc < 2:791013/235‑1 (MQ=255) tCTGGGGTTGATTCCCCCAGTGGAGCAGCAAGGTATTCCGTTACGCCGTTCTCGCAAGCTGCTGGTGATGGAAAACCACAAATTCACCATTA‑TGCAGCGCGATAACACGAC‑TATTGCC‑TGCGCCGCGCTCTATCC‑G‑TTCCCGGAAGAGAAGA‑TTGGGGAAATGGCCTGTGTGGCAGTTCACCCGGATTACCGCAGTTCATCAAGGGGTGAAGTTCTGCTGGAACGCATTGCCGCTCAgg < 2:1253614/239‑1 (MQ=255) tCTGGAGTTGATTCGCCCACTGGAGCAGCAAGGTATTCTGGTACGCCGTTCTCGCGAGCAGCTGGAGATGGAAATCGACAAATTCACCATTA‑TTCAGCGCGATAACACGAC‑TATTGCC‑TGCGCCGCGCTCTATCC‑G‑TTCCCGGAAGAGAAGA‑TTGGGGAAATGGCCTGTGTGGCAGTTCACCCGGATTACCGCAGTTCATCAAGGGGTGAAGTTCTGCTGGAACGCATTGCCGCTCAgg < 2:753477/239‑1 (MQ=255) | GGTAGAAGCCCAGGAAGAGAAAGGCGATTACAACTCCGGTACGGTGCGCTTTTTGCGTGGCGCAGTGAAAGCCTGCCGCAGCGGCGTGCGTCGCTGTCATTTAATCAGTTATCAGGAAGATGGCGCGCTGTTGCAAGAGTTGTTCTCACGCGACGGTATCGGTACGCAGATTGTGATGGAAAGCGCCGAGCAGATTCGTCGCG‑CAACAATCAACGATATTGGCGGTATTCTGGAGTTGATTCGCCCACTGGAGCAGCAAGGTATTCTGGTACGCCGTTCTCGCGAGCAGCTGGAGATGGAAATCGACAAATTCACCATTA‑TTCAGCGCGATAACACGAC‑TATTGCC‑TGCGCCGCGCTCTATCC‑G‑TTCCCGGAAGAGAAGA‑TTGGGGAAATGGCCTGTGTGGCAGTTCACCCGGATTACCGCAGTTCATCAAGGGGTGAAGTTCTGCTGGAACGCATTGCCGCTCAGG > NC_000913/2949938‑2950404 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |