| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,006,048 | G→A | 10.2% | intergenic (‑264/‑212) | ygeV ← / → ygeW | putative sigma‑54‑interacting transcriptional activator/putative carbamoyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,006,048 | 0 | G | A | 10.2% | 206.4 / 2.0 | 82 | intergenic (‑264/‑212) | ygeV/ygeW | putative sigma‑54‑interacting transcriptional activator/putative carbamoyltransferase |
| Reads supporting (aligned to +/- strand): ref base G (29/42); new base A (7/2); total (37/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.08e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GATCATTGAAGACGTTGATGGTTCACAGATCATGATGATATTAACTCAGGCGAAATTGGCTTTGATAAAAACATAAGATTTTTATCATTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGG‑TGAGTTTATCAAACTGAAGAGAGATAGCCTGCCCCTTTATCTTATTTCTGATACTTAGC‑AGCAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAACCCCACACATTATCCGTCAAATTAGTCTTTTGCAGCCG‑CGCGGATAATTCTGGCACACTTATTGTTAGTCCCAGGTATAGCTGTGAAAACACCAATCACTTTGGCAAGT‑CACAGTGAAATAAACCACTTTGCCTGTCATTCCACTACCGGGACTTTATGATGAAAACTGTTAATGAG > NC_000913/3005815‑3006280 | gATCATTGAAGACGTTGATGGTTCACAGATCATGATGATATTAACTCAGGCGAAATTGGCTTTGATAAAAACATAAGATTTTTATCATTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGG‑TGAGTTTATCAAACTGAAGAGAGATAGCCTGCCCCTTTATCTTATTTCTGATACTTAGC‑AGCAAATAAATAACGCGATAAAAAAAGCCaaa < 2:797640/239‑1 (MQ=255) gTTGATGGTTCACAGATCATGATGATATTAACTCAGGCGAAATTGGCTTTGATAAAAACATAAGATTTTTATCATTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGG‑TGAGTTTATCAAACTGAAGAGAGATAGACTTCCCCTTTTTCTTATTTCTGATACTTTAC‑AGCAAATAAATAAAGCGATAAAAAAAACCCAAAGGTTTTT‑TAttt > 2:734884/1‑239 (MQ=255) cATGATGATATTAACTCAGGCGAAATTGGCTTTGATAAAAACATAAGATTTTTATCATTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGG‑TGAGGTTTTCAAAATTAAAAGAGATAGACTGCCCCTTTTTTTTATTTTTTTTACTTTGC‑AGCAAAAAAAAAAAGCGATAAAAAAAACCAAACACTTTTG‑TATTTTTCAAAAAAACaaaaaa > 2:595575/1‑237 (MQ=255) tttttttAACTCAGGTGAAATTGGCTTTGATAAAAACATAAGATTTTTATCATTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGG‑TGAGTTTATCAAACTGAAGAGAGATAGCCTGCCCATTTATCTTATTTCTGATACTTAGC‑AGCAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCa < 1:1187976/234‑1 (MQ=255) ttAACTCAGGCGAAATTGGCTTTGATAAAAACATAAGATTTTTATCATTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGG‑TGAGTTTATCAAACTGAAGAGAGATAGCCTGCCCCTTTATCTTATTTCTGATACTTAGC‑AGCAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAAt < 2:1213375/239‑1 (MQ=255) ttAACGCAGGCGAAATTGGCTTTGATAAAAACATAAGATTTTTATCATTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGG‑TGAGTTTATCAAACTGAAGAGAGATAGCCTGCCCCTTTATCTTATTTCTGATACTTAGC‑AGCAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAAt < 2:1159514/239‑1 (MQ=255) aGGGGAAATTGGTTTTGATAAAAACATAAGATTTTTATCAATTTCGAATGAAATTATGGAAGGGATATCACATTTCTATATCAATATGAGAATTACGGCGG‑TGAGTTTATCAAACTGAAGAGAGATAGCCTGCCCCTTTATCTTATTTCTGATACTTAGC‑AGCAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGAt < 1:143877/239‑1 (MQ=255) gCGAAATTGGCTTTGATAAAAACATAAGATTTTTATCATTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGG‑TGGGGGTATTAAACTAAATAGAGATAACCCTCCCCCTTATTTTCTTTTTTATATTTTGC‑GACAAAAAAAAAACACCCTAAAAAAAACCACACCATTTTG‑TTTTTTACAAAAAACAAAAAACAGGCAACAAatttttgcaa > 1:659130/1‑232 (MQ=255) gCGAAATTGGCTTTGATAAAAACATAAGATTTTTATCATTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGG‑TGAGTTTATCAAACTTAAAAAAAATAACCTGCCCCCTTATCTTATTTCTTATACTTAGC‑AGCAAAAAAAAAAACCCATAAAAAAATACAAAAAGTTTCGATATTTT‑CAAAAAAACAACAACTAGCATCAAATtgtgtatt > 2:817156/1‑235 (MQ=255) aTTTTTATCATTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGG‑TGAGTTTATCAAACTGAAGAGAGATAGCCTGCCCCTTTATCTTATTTCTGATACTTAGC‑AGCAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAAc < 2:81926/213‑1 (MQ=255) ttATCATTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGG‑TGAGTGTATCAAAATGAAGAGAGAGAGCCTGCCCCTTTATCTTATTTCTGATAATTAAC‑AGCAAATAAAAAACAAGAGAAAAAAAGCCAAAAGATTTCG‑TAATTTTCAAACAACCAGAAACTGGACCTAATTTTTGATTAACCCCACACCATCTCCGCCaaaaaagaatttt > 2:115941/1‑229 (MQ=255) tGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGG‑TGAGTTTATCAAACTTAAGAAAAAAAATATTCCCCTTTTTCTTTTTTTTTATACTTTAA‑AGCAAATAAAAAACGAGATAAAAAAAAACAAAAGTTTTTT‑CATTTTTAAAACAAACACAAGCTACAAACCATTTTTTATAAACCCCCCCAAATAAACGTCCAAATAGTCTTTTTCAGACC‑CCCGGaa > 1:698917/1‑238 (MQ=255) aaGAGATATCCCAGTTCTATATCAATATGAGAATTACGGCGG‑TGAGTTTAGCAAACTGAAGAGAGATAGCCTTCCCCTTTATCTTATTTCTGATACTTAGC‑AGCAAATAAATAACGCGATAAAAAAAGGCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAACCCCACACATTATCCGTCAAATTAGTCTTTTGCAGCCG‑CGCGGATAATTCTGGca < 2:320353/238‑1 (MQ=255) aaGAGATATCACATTTCTATATCAATATGAGAATTACGGCGG‑TGAGTTTATCAAACTGAAGAGAGATAGCCTGCCCCTTTATCTTATTTCTGATTCTTAGC‑AGCAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAACCCCACACATTATCCGTCAAATTAGTCTTTTGCAGCCG‑CGCGGATAATTCTGGca < 2:511895/238‑1 (MQ=255) agaTATCACATTTCTATATCAATATGAGAATTACGGCGG‑TGAGGTTATTAAAATGAAGAGAGATAACCTGCCCCCTTATTTTATTTTTGATAATTTGC‑AGCAAATAAATAAAGCGATAAAAAAAAACAAAAGATTTTG‑TATTTTTCAAACAAACAAAAGCTGGCATCAAATTTTGATCAACACCACACAATTTCCCGCCAATTAATCTTTTTCAGCCGCCGCGG‑TAATTATTGcacc > 2:492888/1‑236 (MQ=255) gaTATCACATTTCCATATCAATATGAAAATTACGGCGG‑TGAGTTTATCAAACTGAAGAGAGATAGCCTGCCCCTTTATCTTATTTCTGATACTTAGC‑AGCAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAACCCCACACATTATCCGTCAAATTAGTCTTTTGCAGCCG‑CGCGGATAATTCTGGCACACt < 2:699485/238‑1 (MQ=255) atCACATTTCTATATCAATATGAGAATTACGGCGGTTGGGGTTTTAAACCTGAATAGA‑AAAGACTGCACCTTTTTTTTTTTTCTGTTTCATATC‑AGCAAAAAAAAAAAGACAGAAAAAAAACCAAAAGTTTTTG‑TATTTTTTAAAAAACCAAAAGATGACATAAAATTTTGATTAAACCCCCACCATATACCACAAAATAATCTTTTTCAGACC‑CACGGAAAAATATTACACACCTAta > 1:628/1‑238 (MQ=255) cccaTTTTTTTTTCAATTTGTGAATTTGGGGGG‑TGATTTTATCAAACTGAAGAGAGATAGCCTGCCCCTTTATCTTATTTCTGATACTTAGA‑AGCAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAACCCCACACATTATCCGTCAAATTAGTCTTTTGCAGCCG‑CGCGGATAATTCTGGCACACTTATTGt < 1:595575/237‑1 (MQ=255) cacaGTTCTATATCAATATGAGAATTACGGCGG‑TGAGTTTATCAAACTGAAGAGAGATAGCCTGCCCCTTTATCTTATTTCTGATACTTAGC‑AGCAAATAAATGACGCGATAAAAAAAGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAAccc < 2:128228/177‑1 (MQ=255) aacaagcttattTCAATATGAGAATTTCGGGTG‑TTAGTTTAACAAACTGAAAAAGGATAGCCTGCCCCTTTAACTTATTTCTGATACTTAGC‑AGCAAATAAATAACGCTATAAAAAAAGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAACCCCACACATTATCCGTCAAATTAGTCTTTTGCAGCCG‑CGCGGATAATTCTGGCACACTTATTGt < 1:1225798/231‑1 (MQ=255) ttttttatCAATTTTAGAATTTCAGCGT‑TGATTTTATAAAACTGAAAAAAAATAGACTTCCCCTTTAACTTATTTCTTATACTTAGC‑AGCAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAACCCCACACATTATCCGTCAAATTAGTCTTTTGCAGCCG‑CGCGGATAATTCTGGCACACTTATTGTTAGTc < 1:1004540/234‑1 (MQ=255) ttCTTTACCAATTTGAGAATTACGGGTG‑TGTATTTATCAAACTGAAGAGAGAAGGCCTGCCCATTTAGCTGATTTTTGATACTTCGC‑AGCAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCGTGCATCAATTTGTGATCAACCCAACACATTATCCGTCAAATTAGTCTTTTGCAGCCG‑CGCGGATAATTCTGGCACACTGATTGTTAGTc < 1:817156/239‑1 (MQ=255) ttCTATATCAATATGAGAATTACGGCGG‑TGAGTTTATTAAACTTAAGAGAGATAACCTGCCCCCTTATTTTATTTCTGATAATTAAC‑AGCAAATAAATAACACGCTAAAAAAAACCCAACCGTTTTG‑TATTTTTCAAACAACCAGAAACTGGACTCCACTTTGGATCAAACCCACACATTATCCGTCCAATTAACCTTTTTCTGCCG‑CCCCGGTAATTCTTGTACCCCTATTTTTTGt > 2:139631/1‑238 (MQ=255) cTATATCAATATGAGAATTACGGCGG‑TGAGTTTATCAAACTGAAGAGAGATAGCCTGCCCCTTTATCTTATTTCTGATACTTAGC‑AGCAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAACCCCACACATTATCCGTCAAATTAGTCTTTTGCAGCCG‑CGCGGATAATTCTGGCACACTTATTGTTAGTccc < 2:896983/239‑1 (MQ=255) ttACGGGGG‑TGAGTTTATCAAACTGAAGAGAGATAGCCTGCCCCTTTATCTTATTTCTGATACTTAGC‑AGCAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAACCCCACACATTATCCGTCAAATTAGTCTTTTGCAGCCG‑CGCGGATAATTCTGGCACACTTATTGTTAGTCCCAGGTATAGCTGTGaaaa < 2:483372/239‑1 (MQ=255) aTCAAACTGAAGAGAGATAGCCTGCCCCTTTATCTTATTTCTGATACTTAGC‑AGCAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAACCCCACACATTATCCGTCAAATTAGTCTTTTGCAGCCG‑CGCGGATAATTCTGGCACACTTATTGTTAGTCCCAGGTATAGCTGTGAAAACACCAATCACTTTGGc < 2:659130/239‑1 (MQ=255) atcttaagagaattaagcTGCCCCTTTATCTTAATTCTGATACTTAGC‑AGGAAATAAATACCGCGATAAAAAAAGCCAAAGTGTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAACCCCACACATTATCCGTCAAATTAGTCTGTTGCAGCCG‑CGCGGATAATTCTGGCACACTTATTGTTAGTCCCAGGTATAGCTGTGAAAACACCAATCACTTTGGCAAGt < 1:3374/222‑1 (MQ=255) aaCTGAAGAGAGATAGCCTGCCCCTTTATCTTATTTCTGATACTTAGC‑AGCAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAACCCCACACATTATCCGTCAAATTAGTCTTTTGCAGCCG‑CGCGGATAATTCTGGCACACTTATTGTTAGTCCCAGGTATAGCTGTGAAAACACCAATCACTTTGGCAAGt < 2:628/239‑1 (MQ=255) atGAAAAGAAATAACCTTCCCCTTTATTTTATTTTTGATTCTTAGC‑AGCAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAACCCCACACATTATCCGTCAAATTAGTCTTTTGCAGCCG‑CGTGGATAATTCTGGCACACTTATTGTTAGTCCCAGGTATAGCTGTGAAAACACCAATCACTTTGGCAAGT‑ca < 1:492888/238‑1 (MQ=255) gAAGAGAAATAGCCTGCCCCTTTATCTTATTTCTGATACTTAGC‑AGCAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAACCCCACACATTATCCGTCAAATTAGTCTTTTGCAGCCG‑CGCGGATAATTCTGGCACACTTATTGTTAGTCCCAGGTATAGCTGTGAAAACACCAATCACTTTGGCAAGT‑caca < 2:480417/239‑1 (MQ=255) aaGAGAGATAGCCTGCCCCTTTATCTTATTTCTGATACTTAGC‑AGCAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAACCCCACACATTATCCGTCAAATTAGTCTTTTGCAGCCG‑CGCGGATAATTCTGGCACACTTATTGTTAGTCCCAGGTATAGCTGTGAAAACACCAATCACTTTGGCAAGT‑CACAg > 2:3374/1‑239 (MQ=255) aaGAGAGATAGCCTGCCCCTTTATCTTATTTCTGATACTTAGC‑AGCAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAACCCCACACATTATCCGTCAAATTAGTCTTTTGCAGCCG‑CGCGGATAATTCTGGCACACTTATTGTTAGTCCCAGGTATAGCTGTGAAAACACCAATCACTTTGGCAAGT‑CACAg > 2:301441/1‑239 (MQ=255) agagagATAGCCTGCCCCTTTATCTTATTTCTGATACTTAGC‑AGCAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAACCCCACACATTATCCGTCAAATTAGTCTTTTGCAGCCG‑CGCGGATAATTCTGGCACACTTATTGTTAGTCCCAGGTATAGCTGTGAAAACACCAATCACTTTGGCAAGT‑CACAg < 2:1174935/238‑1 (MQ=255) aTAGCCTGCCCCTTTATCTTATTTCTGATACTTAGC‑AGCAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAACCCCACACATTATCCGTCAAATTAGTCTTTTGCAGCCG‑CGCGGATAATTCTGGCACACTTATTGTTAGTCCCAGGTATAGCTGTGAAAACACCAATCACTTTGGCAAGT‑CACAGTGAAATa > 2:204386/1‑239 (MQ=255) gCCTGCCCCTTTATCTTATTTCTGATACTTAGC‑AGCAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAACCCCACACATTATCCGTCAAATTAGTCTTTTGCAGCCG‑CGCGGATAATTCTGGCACACTTATTGTTAGTCCCAGGTATAGCTGTGACAACACCAATCACTTTGGCAAGT‑CACAGTGAAATaaa > 2:729763/1‑238 (MQ=255) gCCTGCCCCTTTATCTTATTTCTGATACTTAGC‑AGCAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAACCCCACACATTATCCGTCAAATTAGTCTTTTGCAGCCG‑CGCGGATAATTCTGGCACACTTATTGTTAGTCCCAGGTATAGCTGTGAAAACACCAATCACTTTGGCAAGT‑CACAGTGAAATAAAc > 2:250124/1‑239 (MQ=255) cttccccTTATTTTTTTTTTTGATACTTACA‑CGCAAAAAAATAACGCGATAAAAAAAGCACAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAACCCCACACATTATCCGTCAAATTAGTCTTTTGCAGCCG‑CGCGGATAATTCTGGCACACTTATTGTTAGTCTCAGGTATAGCTGTGAAAACACCAATCACTTTGGCAAGT‑CACAGTGAAATAAACCa < 1:120065/236‑1 (MQ=255) ccccTTTATCTTCTTTCTGATACTTAGC‑AGCAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGTTCACCCCCACACATTATCCGTCAAATTAGCCTTTTGCAGCCG‑CGCGGATCATTCTGGCACACTTATGCTTCTTCCCAGGTATAGCTGTGAAAACCCAAATCACTTTGGCAAGC‑CACAGGGAAAAAAAACACtt > 1:24648/1‑239 (MQ=255) ccccTTTATCTTATTTCTGATACTTAGC‑AGCAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAACCCCACACATTATCCGTCAAATTAGTCTTTTGCAGCcg‑c > 2:497616/1‑149 (MQ=255) ccccTTTATCTTATTTCTGATACTTAGC‑AGCAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAACCCCACACATTATCCGTCAAATTAGTCTTTTGCAGCcg‑c < 1:497616/149‑1 (MQ=255) ccccTTTATCTTATTTCTGATACTTAGC‑AGCAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAACCCCACACATTATCCGTCAAATTAGTCTTTTGCAGCCG‑CGCGGATAATTCTGGCACACTTATTGTTAGTCCCAGGTATAGCTGTGAAAACACCAATCACTTTGGCAAGT‑CACAGTGAAATAAACCACtt > 2:789870/1‑239 (MQ=255) ccccTTTATCTTATTTCTGATACTTAGC‑AGCAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAACCCCACACATTATCCGTCAAATTAGTCTTTTGCAGCCG‑CGCGGATAATTCTGGCACACTTATTGTTAGTCCCAGGTATAGCTGTGAAAACACCAATCACTTTGGCAAGT‑CACAGGGAAATAAACCACtt > 2:1276608/1‑239 (MQ=255) ccccTTTATCTTATTTCTGATACTTAGC‑AGCAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAACCCCACACATTATCCGTCAAATTAGTCTTTTGCAGCCG‑CGCGGATAATTCTGGCACACTTATTGTTAGTCCCAGGTATAGCTGTGAAAAAACCAATCACTTTGGCAAGT‑CACAGTGAAATAAACCACtt > 2:385801/1‑239 (MQ=255) ccccTTTATCTTATTTCTGATACTTAGA‑AGCAAATAAATAGCGCGATATAAAAAGCCAAACGTTTTCG‑TCTTTCACAAACAACCAGACGCTGGCATCAATTTGTGATCAACCCAACACATTATCCGTCAACTTAGACTTTTGCAGCCG‑CGCGGATAATCCTGGCACACTTCTTGTTAGTCCCAGGTATAGCTGGGAAAAAACCAATCACTTTGTAAAGA‑CAAAGTGAaaaaaaaaaata > 1:1058872/1‑233 (MQ=255) cccTTTATCTTATTTCTGATACTTAGA‑AGCAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAACCCCACACATTATCCGTCAAATTAGTCTTTTGCAGCCG‑CGCGGATAATTCTGGCACACTTATTGTTAGTCCCAGGTATAGCTGTGAAAACACCAATCACTTTGGCAAGT‑CACAGTGAAATAAACCACttt < 2:657214/239‑1 (MQ=255) cTTTATCTTATTTCTGATACTTAGC‑AGCAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAAGTTGTGATCAACCCCACTCATTATCCGTCAAATTAGTCTTTTGCAGCCG‑CGCGGATAATTCTGGCACACTTATTGTTAGTCCCAGGTATAGCTGTGAAAACACCAATCACTTTGGCAAGT‑CACAg < 2:1155703/221‑1 (MQ=255) tttATCTTATTTCTGATACTTAGC‑AGCAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAACCCCACACATTATCCGTCAAATTAGTCTTTTGCAGCCG‑CGCGGATAATTCTGGCACACTTATTGTTAGTCCCAGGTATAGCTGTGAAAACACCAATCACTTTGGCAAGT‑CACAGTGAAATAAACCACTTTGcc < 2:856942/239‑1 (MQ=255) tATCTTATTTCTGATACTTAGC‑AGCAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAAACCCACACATTATCCGTCAAATTAGTCTTTTGCAGCCG‑CGCGGATAATTCTGTGACACTTATTGTTAGTCCCAGGTATAGCTGTGAAAAAACCAATCACTTTTGAAAGT‑CACAGTGAAAAAAACCACATTGCCTg > 1:861991/1‑239 (MQ=255) tttttATTTTTTATACTTAAA‑AGGAAATAAATAGCGCGATAAAAAAAGCCAAACGTTTTCG‑TATTTTAAAAAAAAACAGAAAGTGGCATCAACTTGTGATCCACCCCACCCATTATCCGTCAAATTAGGCTTTTGCAGCCG‑CGCGGATAATTCTGGCACACTTATTGTTAGTCCCAGGTATAGCTGTGAAAACACCAATCACTTTGGCAAGT‑CACAGTGAAATAAACCACTTTGCCTGt < 1:1064616/236‑1 (MQ=255) tttctATTTTTGATTCTTAGCAAGAAAATAAA‑AACCGGATAAAAAAAGCCAAACGGTTTCC‑TTTTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAACCCCACACATTATCCGTCAAATTAGTCTTTTGCAGTCG‑CGCGGATAATTCTGGCACACTTATTGTTAGTCCCAGGTATAGCTGTGAAAACACCAATCACTTTGGCAAGT‑CACAGTGAAATAAACCACTTTGCCTGt < 1:1214993/235‑1 (MQ=255) aTCTTATTTCTGATACTTAGC‑AGCAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAACCCCACACATTATCCGTCAAATTAGTCTTTTGCAGCCG‑CGCGGATAATTCTGGCACACTTATTGTTAGTCCCAGGTATAGCTGTGAAAACACCAATCACTTTGGCAAGT‑CACAGTGAAATAAACCACTTTGCCTGt < 2:673260/239‑1 (MQ=255) tttCTGATACTTAGC‑AGCAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCG‑TATTTTACAAACAACCAGCAGCTGGCATCAATTTGTGATCAACCCCACACATTATCCGTCAAATTAGTCTTTTGCAGCCG‑CGCGGATAATTCTGGCACACTTATTGTTATTCCCAGGTTCAGCTGTGACAACCCAAACCACTTTGGAAAGT‑ACCAGTGCACAAAAccctgtttcttaaacacaa > 1:1155703/1‑222 (MQ=255) tttCTGATACTTAGC‑AGCAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAACCCCACACATTATCCGTCAAATTAGTCTTTTGCAGCCG‑CGCGGATAATTCTGGCACACTTATTGTTAGTCCCAGGTATAGCTGTGAAAACACCAATCACTTTGGCAAGT‑CACAGTGAAATAAACCACTTTGCCTGTCATTcc > 2:1019549/1‑239 (MQ=255) tttCTGATACTTAGC‑AGCAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAACCCCACACATTATCCGTCAAATTAGTCTTTTGCAGCCG‑CGCGGATAATTCTGGCACACTTATTGTTAGTCCCAGGTATAGCTGTGAAAACACCAATCACTTTGGCAAGT‑CACAGTGAAATAAACCACTTTGCCTGTCATTc > 2:764973/1‑238 (MQ=255) tttCTGATACTTAGC‑AGCAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAACCCCACACATTATCCGTCAAATTAGCCTTTTGCAGCCG‑CGCGGATAATTCTGGCACACTTATTGTTAGTCCCAGGTATAGCTGTGAAAACACCAATCACTTTGGCAAGT‑CACAGTGAAATAAACCACTTTGCCTGTCATTc > 2:71270/1‑238 (MQ=255) tttCTGATACTTAGC‑AGCAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCG‑TATTTTACAAACAACAAGAAGCTGGCATCAATTTGTGATCAACACCACACATTATCCGTCAAATTAGCCTTTTGCAGCCG‑CGCGGATACTTCTGGCACACTTATTGTTATTCCCAGGCATACTTTTGAAAAAACCAATAACTTTGGCAAGTACACA‑TGAAAAAAAACCATTTGCCttcaattcc > 1:314003/1‑231 (MQ=255) ttCTGATACTTAGC‑AGCAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAACCCCACACATTATCCGTCAAATTAGTCTTTTGCAGCCG‑CGCGGATAATTCTGGCACACTTATTGTTAGTCCCAGGTATAGCTGTGAAAACACCAATCACTTTGGCAAGT‑CACAGTGAAATAAACCACTTTGCCTGTCATTCCa < 2:861991/239‑1 (MQ=255) tatatttgac‑agtaAATAAGTAACGCGATAAAAAAACCCAAAGCTCTTCG‑TATTTAACCACAAACGCGAAGGTGACATCAATTTGGGATCAACCCGACTCATTATCCGTCAAAGTAGGCGTTTGCAGCCG‑CGCGGATAATTCTGGCACACTTATTGTTAGTCCCAGGTATAGCTGTGAAAACACCAATCCCTTTGGCAAGT‑CACAGTGAAATAAACCACTTTGCATGTCATTCCACttc < 1:17067/230‑3 (MQ=255) gATACTTAGC‑AGCAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAACCCCACACATTATCCGTCAAATTAGTCTTTTGCAGCCG‑CGCGGATAATTCTGGCACACTTATTGTTAGTCCCAGGTATAGCTGTGAAAACACCAATCACTTTGCCAAGT‑CACATTGAAATAAACCACTTTGCCTGACATTCCACTa > 2:567802/1‑238 (MQ=255) agc‑agcAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAACCCCACACATTATCCGTCAAATTAGTCTTTTGCAGCCG‑CGCGGATAATTCTGGCACACTTATTGTTAGTCCCAGGTATAGCTGTGAAAACACCAATCACTTTGGCAAGT‑CACAGTGAAATAAACCACTTTGCCTGTCATTCCACTACCGGGCCt > 2:987750/1‑239 (MQ=255) agc‑agcAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAACCCCACACATTATCCGTCAAATTAGTCTTTTGCAGACG‑CGCGGATAATTCTGGCACACTTATTGTTAGTCCCAGGTATAGCTGTGAAAACACCAATCACTTTGGCAAGT‑CCCAGTGAAATAAACCACTTTGACTGTCATTCCACAACCGGGACt > 1:1284585/1‑239 (MQ=255) catcaAAAAAAAAAAGCGATAAAAAAAGACAAACGTTTTCG‑TATTTTCCAAACAACCAGAAGCTGGCATCAATTTGTGATCAACCCCACACATTATCCGTCAAGTTAGTCTTTTGCAGCCG‑CGCGGATAATTCTGGCACACTTATTGTTAGGCCCAGGTATAGCTGTGAAAACACCAATCACTTTGGCAAGT‑CACAGTGAAATAAACCACTTTGCCTGTCATTCCACTACCGGGACttt < 1:1019549/236‑1 (MQ=255) caAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAACCCCACACATTATCCGTCAAATTAGTCTTTTGCAGCCG‑CGCGGATAATTCTGGCACACTTATTGTTAGTCCCAGGTATAGCTGTGAAAACACCAATCACTTTGGCAAGT‑CACAGTg < 2:1288129/196‑1 (MQ=255) aataaataACGCGATAAAAAAAGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAACCCCACACATTATCAGTCAAATTAGTCTTTTGCAGCCG‑CGCGGATAATTCTGGAAACCTTATTGTTAGTCCAAGTGTTAGCTGTGAAAAAACAAATCACTTTGGCAAGT‑ACCAAGGAATTAAAACACTTTGCCAGTAATTCCACACCCGGGACTTTatgat > 1:1001705/1‑239 (MQ=255) aaataaCGCAATAAAAAAAGCCAAACGTTTTCC‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAACCCCACACATTATCCGTCAAATTAGTCTTTTGCAGCCG‑CGCGGATAATTCTGGCACACTTATTGTTAGTCCCAGGTATAGCTGTGAAAACACCAATCACTTTGGCAAGT‑CACAGTGAAATAAACCACTTTGCCTGTCATTCCACTACCGGGACTTTATGATGaa < 2:158607/239‑1 (MQ=255) aCGCGATAAAAAAAGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAACCCCACACATTATCCGTCAAATTAGTCTTTTGCAGCCG‑CGCGGATaa > 2:13904/1‑117 (MQ=255) aCGCGATAAAAAAAGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAACCCCACACATTATCCGTCAAATTAGTCTTTTGCAGCCG‑CGCGGATaa < 1:13904/117‑1 (MQ=255) aCGCGATAAAAAAAGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAACCCCACACATTATCCGTCAAATTAGTCTTTTGCAGCCG‑CGCGGATAATTCTGGCACACTTATTGTTAGTCCCAGGTATAGCTGTGAAAACACCAATCACTTTGGCAAGT‑CACAGTGAAATAAACCACTTTGCCTGTCATTCCACTACCGGGACTTTATGATGaaa > 2:266681/1‑235 (MQ=255) cgcgATAAAAAAAGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAACCCCACACATTATCCGTCAAATTAGTCTTTTGCAGCCG‑CGCGGATAATTCTGGCACACTTATTGTTAGTCCCAGGTATAGCTGTGAAAACACCAATCACTTTGGCAAGT‑CACAGTGAAATAAACCACTTTGCCTGTCATTCCACTACCGGGACTTTATGATGAAAACTGt > 2:750636/1‑239 (MQ=255) cgcgATAAAAAAAGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAACCCCACACATTATCCGTCAAATTAGTCTTTTGCAGCCG‑CGCGGATAATTCTGGCACACTTATTGTTAGTCCCAGGTATAGCTGTGAAAAAACCAATCACTTTGGCAAGT‑CACAGTGAAATAAACCACTTTGCCTGTCATTCCACTACCGGGACTTTATTATGaaaaaagt > 1:718821/1‑235 (MQ=255) cgttAAAAAAAACCAACTTGTTTCT‑AATTTTACAATCAGCCAGAAGCTGGCATGAATGTGTGATCAACACCACTCATTATCCGTCAAATTAGTCTTTTGCAGCCG‑CGCGGATAATTCTGGCACACTTATTGTTAGTCCCAGGTATAGCTGTGAAAACACCAATCACTTTGGCAAGT‑CACAGTGAAATAAACCACTTTGCCTGTCATTCCACTACCGAGACTTTATGATGAAAACTGTTa < 1:385801/236‑1 (MQ=255) cgATAAAAAAAGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAACCCAACACATTATCCGTCAAATTAGTCTTTTGCAGCCG‑CGCGGATAATTCTGGCACACTTATTGTTAGTCCCAGGTATAGCTGTGAAAACACAAATCACTTTGGCAAGT‑CACAGTGAAATAAACAACTTTGCCCGTCTTTCCAACACCGGGCATTTCAGATAaaaaacttta > 1:837885/1‑233 (MQ=255) aTAAAAAAAGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAACCCCACACATTATCCGTCAAATTAGTCTTTTGCAGCCG‑CGCGGTCAATTCTGGCACACTTATTGTTAGTCCCAGGTATACCTTTGAAAACACCACTACCTTTGGCCAGT‑CCCAGGGAAATAAACCACTTTACCTGTCATTCCCCTCCCCGGCCTTTAATAAAAAAACTGTAAAt > 1:283546/1‑239 (MQ=255) aTAAAAAAAGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAACCCCACACATTATCCGTCAAATTAGTCTTTTGCAGCCG‑CGCGGATAATTCTGGCACACTTATTGTTAGTCCCAGGTATAGCTGTGAAAACACCAATCACTTTGGCAAGT‑CACAGTGAAATAAACCACTTTGCCTGTCATTCCACTACCGGGACTTTATGATGAAAACTGTTAAt > 2:795246/1‑239 (MQ=255) aaaaaaGCCATATGTTTTCG‑TATTTTACAAACAAACAGAAGCTGGCATCAATTTGTGATCAACCCCACTCATTATCCGTCAAATTAGTCTTTTGCAGCCG‑CGCGGATAATTCTGGCACACTTAGTGTTAGTCCCAGGTATAGCTGTGAAAACACCAATCACTTTGGCAAGG‑CACAGTGAAATAAACCACTTTGCCTGTCATTCCACTACCGGGACTTTATGATGAAAACTGTTAATGAg < 1:764973/239‑1 (MQ=255) aaaaaaGCCAAACGTTTTCG‑TTTTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAACCCCACACATTATCCGTCAAATTAGTCTTTTGCAGCCG‑CGCGGATAATTCTGGCACACTTATTGTTAGTCCCAGGTATAGCTGTGAAAACACCAATCACTTTGGCAAGT‑CACAGTGAAATAAACCACTTTGCCTGTCATTCCACTACCGGGACTTTATGATGAAAACTGTTAATGAg < 2:1114494/239‑1 (MQ=255) aaaaaaGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAACCCCACACATTATCCGTCAAATTAGTCTTTTGCAGCCG‑CGCGGATAATTCTGGCACACTTATTGTTAGTCCCAGGTATAGCTGTGAAAACACCAATCACTTTGGCAAGT‑CACAGTGAAATAAACCACTTTGCCTGTCATTCCACTACCGGGACTTTATGATGAAAACTGTTAATGAg < 2:1058872/239‑1 (MQ=255) aaaaaaGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAACCCCACACATTATCCGTCAAATTAGTCTTTTGCAGCCG‑CGCGGATAATTCTGGCACACTTATTGTTAGTCCCAGGTATAGCTGTGAAAACACCAATCACTTTGGCAAGT‑CACAGTGAAATAAACCACTTTGCCTGTCATTCCACTACCGGGACTTTATGATGAAAACTGTTAATGAg < 2:837885/239‑1 (MQ=255) aaaaaaGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAACCCCACACATTATCCGTCAAATTAGTCTTTTGCAGCCG‑CGCGGATAATTCTGGCACACTTATTGTTAGTCCCAGGTATAGCTGTGAAAACACCAATCACTTTGGCAAGT‑CACAGTGAAATAAACCACTTTGCCTGTCATTCCACTACCGGGACTTTATGATGAAAACTGTTAATGAg < 2:718821/239‑1 (MQ=255) aaaaaaGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAACCCCACACATTATCCGTCAAATTAGTCTTTTGCAGCCG‑CGCGGATAATTCTGGCACACTTATTGTTAGTCCCAGGTATAGCTGTGAAAACACCAATCACTTTGGCAAGT‑CACAGTGAAATAAACCACTTTGCCTGTCATTCCACTACCGGGACTTTATGATGAAAACTGTTAATGAg < 2:698917/239‑1 (MQ=255) aaaaaaGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAACCCCACACATTATCCGTCAAATTAGTCTTTTGCAGCCG‑CGCGGATAATTCTGGCACACTTATTGTTAGTCCCAGGTATAGCTGTGAAAACACCAATCACTTTGGCAAGT‑CACAGTGAAATAAACCACTTTGCCTGTCATTCCACTACCGGGACTTTATGATGAAAACTGTTAATGAg < 2:328755/239‑1 (MQ=255) aaaaaaACCAAACTTTTTCG‑TTTTTTACAAACAACCAGACGTTGGCAACAATTTGGGCACAAACCAACACTGTATCCGTCAAAGTAGTCTGTTGCAGCCG‑CGCGGATAATTCTGGCACACTTATTGTTAGTCCCAGGTATAGCTGTGAAAACACCAATCACTTTGGCAAGT‑CACAGTGAAATAAACCACTTTGCCTGTCATTCCACTACCGGCACTTTATGATGAAAACTGTTAATGAg < 1:734884/239‑1 (MQ=255) | GATCATTGAAGACGTTGATGGTTCACAGATCATGATGATATTAACTCAGGCGAAATTGGCTTTGATAAAAACATAAGATTTTTATCATTTTCTAATGAAATTATGGAAGAGATATCACATTTCTATATCAATATGAGAATTACGGCGG‑TGAGTTTATCAAACTGAAGAGAGATAGCCTGCCCCTTTATCTTATTTCTGATACTTAGC‑AGCAAATAAATAACGCGATAAAAAAAGCCAAACGTTTTCG‑TATTTTACAAACAACCAGAAGCTGGCATCAATTTGTGATCAACCCCACACATTATCCGTCAAATTAGTCTTTTGCAGCCG‑CGCGGATAATTCTGGCACACTTATTGTTAGTCCCAGGTATAGCTGTGAAAACACCAATCACTTTGGCAAGT‑CACAGTGAAATAAACCACTTTGCCTGTCATTCCACTACCGGGACTTTATGATGAAAACTGTTAATGAG > NC_000913/3005815‑3006280 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |