| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,206,436 | G→A | 22.8% | intergenic (‑182/‑25) | ttdR ← / → ttdA | transcriptional activator of ttdABT/L‑tartrate dehydratase, alpha subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,206,436 | 0 | G | A | 22.8% | 98.1 / 10.3 | 60 | intergenic (‑182/‑25) | ttdR/ttdA | transcriptional activator of ttdABT/L‑tartrate dehydratase, alpha subunit |
| Reads supporting (aligned to +/- strand): ref base G (7/37); new base A (5/8); total (14/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.20e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TTTCTACCAGTACCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTT‑TAGTGGTAGTTTGTGGCGG‑TGAATTTTTC‑CA‑GACAAAT‑ACAAAAACTGGAGTTGCC‑ATGATGAGCGAAAGTAATAAG‑CAACAGGCAGTGAATAAGT‑TGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGAC > NC_000913/3206206‑3206655 | tttCTACCAGTACCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTT‑TAGTGGTAGTTTGTGGCGG‑TGAATTTTTC‑CA‑GACAAAT‑Ac < 2:68724/239‑1 (MQ=255)ttgctccctgTAACTGCAAGTCTTTGGCTAAAGGCCAGGTATTCAGCATCGTTTATTATCCGCCGTTGTGATAAGGGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTTTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTT‑TAGTGGGAGTTTGTGGCGG‑TGAATTTTTC‑CA‑GACAAAT‑Ac < 1:141636/230‑1 (MQ=255) tctcctgtcacTGCAAGTTTTTGGCATAAGGGCAGGTTTTCAGGAGTGTTAATTATCCGCAGTTTTGATAAGGCGAGTTTAGTTCGCAAAACATTGCCAGTCCCTGCTCTGGCGCAATATTCATTCTTATTTGCGCGTTGACTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTT‑TAGTGGTAGTTTGTGGCGG‑TGAATTTTTC‑CA‑GACAAAT‑ACaaa < 1:65876/229‑1 (MQ=255) aCCAGTACCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTAATTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTT‑TAGTGGTAGTTTGTGGCGG‑TGAAATTTTA‑CA‑CTCAaaa‑aaaaaaa > 2:1112574/1‑239 (MQ=255) tACCTGCAAGTCTTTGGCTAAAGTCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGAGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCCATATTCATTCTTATTTTCGCGTTGATTCCCGAACTTTTAATTCAATATTACCGGCGCCAAAAATTTTAAAACACC‑ATTTTATGGTGATATTTTGTGAGGG‑TGCATTTTCC‑CA‑‑AAAAAA‑ACaaaaaacatg > 1:559609/1‑234 (MQ=255) tACCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTT‑TAGTGGTAGTTTGTGGCGG‑TGAATTTTTT‑CA‑GCACAAT‑Aaaaaaaaacaa > 2:789733/1‑234 (MQ=255) tcctgacatgtttggtgaaaaGGCCTGTTATTCATCATCTTGAATTATCCGCAGTTGTGATAAGCGCAGTTTATTTCGCAAAACCTTGCCATTCCCATCTCTGGCTCAATATGCATTCTTATTTGCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTAT‑GAGTGGTAGTTTGTGGCGG‑TGAATTTTTC‑CA‑GACAAAT‑ACAAAAACTGGAg < 1:359811/221‑1 (MQ=255) aCCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTT‑TAGTGGTAGTTTGTGGCGG‑TGAATTTTTC‑CA‑GACAAAT‑ACAAAAACTGGAg < 2:907732/239‑1 (MQ=255) tCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTT‑TAGTGGTAGTTTGTGGCGG‑GTAGTTTTTC‑TT‑ATCCAAT‑ACAAAAAcattaaagtgcacga > 2:180620/1‑225 (MQ=255) cTTTGGCTAAAGGCCAGCTATTCAGCATCGGTAATTATCCGCAGTTGTTATAAGCGCAGTGTATTTCGTAAAACAGTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTT‑TAGTGGTAGTTTGTGGCGG‑TGAATTTTTC‑CA‑GACAAAT‑ACAAAAACTGGAGTTGCC‑atg < 2:112481/237‑1 (MQ=255) tGGTTAAAGGCCAGCTTTTCAGCATCGTTAATTATCCCCATGTGTGAAAAGCGCAGTGTATTTCGGAAAACATTGCCATTCCCTGCTCTTGCGCAATATTCATTCTTATTTGCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTT‑TAGTGGTAGTTTGTGGCGG‑TGAATTTTTC‑CA‑GACAAAT‑ACAAAAACTGGAGTTGCC‑ATGATGAg < 1:525281/239‑1 (MQ=255) tGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTT‑TAGTGGTAGTTTGTGGCGG‑TGAATTTTTC‑CA‑GACAAAT‑ACAAAAACTGGAGTTGCC‑ATGATGAg < 2:1085298/239‑1 (MQ=255) tAAAGGCCAGCTATTCAGCCTCGTTAATTATCCGGAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTT‑TAGTGGTAGTTTGTGGCGG‑TGAATTTTTC‑CA‑GACAAAT‑ACAAAAACTGGAGTTGCC‑ATGATGAGCGa < 2:777638/238‑1 (MQ=255) tAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTT‑TAGTGGTAGTTTGTGGCGG‑TGAATTTTTC‑CA‑GACAAAT‑ACAAAAACTGGAGTTGCC‑ATGATGAGCGa < 2:752292/238‑1 (MQ=255) tAAAGGACTACTATTCAGCATCGTTAATTATTCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACTGTGCCATTCCCTGCTCTGGCGCAATATTCAGTCTTATTTGCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTG‑TAGTGGTAGTTTGTGGCGG‑TGAATTTTTC‑CA‑GACAAAT‑ACAAAAACTGGAGTTGCC‑ATGATGAGCGa < 1:764225/238‑1 (MQ=255) aaTTTTCCGCAGTTGTGATAAGCGCAGTTTTTTTCTGAAAACATTGCCCTTCCCTGCTCTGGCTCAATATTCATTCTTATGTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTT‑TAGTGGTAGTTTGTGGCGG‑TGAATTTTTC‑CA‑GACAAAT‑ACAAAAACTGGAGTTGCC‑ATGATGAGCGAAAGTAATAAG‑CAACAGGCAGTGAATa < 1:33148/239‑1 (MQ=255) ttttttcccatttGTGAATAGCGCTTGGTATTTCGCAAAACATTGCCACTCCCTGCTCTGGGGCAAGATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTT‑TAGTGGTAGTTTGTGGCGG‑TGAATTTTTC‑CA‑GACAAAT‑ACAAAAACTGGAGTTGCC‑ATGATGAGCGAAAGTAATAAG‑CAACAGGCAGTGAATaa < 1:725053/228‑1 (MQ=255) aTTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTT‑TAGTGGTAGTTTGTGGCGG‑TGAATTTTTC‑CA‑GACAAAT‑ACAAAAACTGGAGTTGCC‑ATGATGAGCGAAAGTAATAAG‑CAACAGGCAGTGAATaa < 2:450741/239‑1 (MQ=255) ccGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTT‑TAGTGGTAGTTTGTGGCGG‑TGGAATTTTT‑CA‑GACCAAA‑AAAAAAAATAGAGTTGCC‑ATGATTGGCGGAAGGAATAAGACAAAAGACAGTGAaaaattga > 2:765516/1‑235 (MQ=255) aGCGCAGTGTATTTCGCAAAACAGTGCTATTCCCTGCTCTGGCGAAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTT‑TAGTGGTAGTTTGTGGCGG‑TGAATTTTTC‑CA‑GACAAAT‑ACAAAAACTGGAGTTGCC‑ATGATGAGCGAAAGTAATAAG‑CAACAGGCAGTGAATAAGT‑TGACAGAGATTGTCGCt < 2:638722/239‑1 (MQ=255) aGCGAAGTGTATTTCGCAAACCATTCGCATTCCCTGCTTGGGCGCAATATTCATTCTTATTTTCGGGTTGATTCACGAACTTTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTT‑TAGTGGTAGTTTGGGGCGG‑TAAATTTTTC‑CA‑GACAAAT‑ACAAAAACTGGAGTTGCC‑AGGATGAGCGAAAGTAATAAG‑CAACAGGCAGTGAATAAGT‑TGACAGAGATTGTCGCt < 2:559609/239‑1 (MQ=255) cgcAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTT‑TAGTGGTAGTTTGTGGCGG‑TGAATTTTTT‑TATAACAAAT‑‑CAAAAAAAGGGGTTTGC‑CTATTGAGCGGAAATAAAAAG‑CAACAAGCCATGAATaaatgttaaaagattgtttctaa > 2:1263026/1‑218 (MQ=255) attgtTTTTCGCAAAACATTGCCATTCCCTGCTCTTGCGCAATATTCATTCTTATTTTGGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGAAAAAAATATAAAACCAC‑ATTTT‑TAGTGGTAGTTTGTGGCGG‑TGAATTTTTC‑CA‑GACAAAT‑ACAAAAACTGGAGTTGCC‑ATGATGAGCGAAAGTAATAAG‑CATCAGCCAGTGAATAAGT‑TGACAGAGATTGTCGCTAACt < 2:579773/236‑1 (MQ=255) tGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTT‑TAGTGGTAGTTTGTGGCGG‑TGAATTTTTT‑TC‑AACAACA‑ACAAAAACATGAATTGCC‑ATGGTGAGCGAAAGGAAAAAA‑AAAAAGACAGAGAAAAAAA‑TGACAACAAATTTCGCTAACATTACccccccaatatctac > 1:1024431/1‑227 (MQ=255) tttcctcgccttggacaaaTTTTAATTCTTTTTTTGGCGTTGATCCACGAAGTGTTAATTCAATATTCCGGGGGGTAAAAAATAAAAAACCAC‑ATTTT‑TAGTGGTAGTTTGTGGGGG‑TGAATTTTTC‑CA‑GACAAAT‑AAAAAAACTGGAGTTGCC‑ATGATGAGCGAAAGTAATAAG‑CAACAGGCAGTGAAAAAGT‑TGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGaa < 2:550537/222‑1 (MQ=255) attttttaaaagaaacagattttcttttTTTTTTTGGCTTTGATTCACAAACTTTAAATTCAATTTTCACGTTGACAAAAAATAAAAAACCAC‑ATTTT‑TAGTGGTAGTTTGTGGCGG‑TAAATTTTCC‑AA‑AAAAAAT‑AAAAAAACTGGAGTTGCC‑ATGATGAGCGAAATTAATAAG‑CAACAGGCAGTAAATAAGT‑TGAAAGAGATTGTCGCTACCTTTACCGCCATGATTTCTACCCGaa < 2:1198850/218‑1 (MQ=255) ttgtgttaaagagaaaatttttcatttTTATTTCCGGTTTGATTCAAGAACTGTTAATTACATATTCGCGGTGGAAAAAAATATAAAACCAC‑ATTTT‑TAGTGGTAGTTGGTGGCGG‑TGAATTTTTC‑CA‑GACAAAT‑AAAAAAACTGGAGTTGCC‑ATGATGAGCGAAAGTAATAAG‑CAACAGGCAGTGAATAAGT‑TGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGaa < 2:568454/218‑1 (MQ=255) cttgttctGGCTAAATTTTCATTCTTATTTCCGCGTTGATTCCCGACCGTTTAATTACATATTCACGGTGGAAAAAAATATAAAACCAC‑ATTTT‑TAGTGGTAGTTTGTGGGGG‑TAAATTTTCC‑CA‑AACAAAT‑ACAAAACCTGGAGTTGCA‑ATGATGAGCGAAATTAATAAG‑CAACAGGCAGTGAATAAGT‑TGACAGAGATTGTCGCTACCTTTACCGCCATGATTTCTACCCGAATGcc < 2:85648/234‑1 (MQ=255) ctctGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTT‑TAGTGGTAGTTTGTGGCGG‑TGAATTTTTT‑CC‑AACAAAA‑AAAAAAACAGGAGTTGCC‑ATGATGAGCGGAAGAAATAAA‑CAACAAGCAGGGAATAAGA‑TGACAAAGGTTGTTGCTAACTTTACCGCCATGATTTTTTCCCCAACGccccat > 2:1125536/1‑235 (MQ=255) ctctGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTT‑TAGTGGTAGTTTGTGGCGG‑GGAATTTTTT‑CA‑GACAAAA‑AAAAAAAAAGGAGGTGCC‑CTGTTGAGGGGAAGAAATAAA‑CAACAAGAAGTGAATAAAT‑TGTCAGAGGTTGTTGCGAACTTTACTGCCCTGAGTTCTACCCCAAAACCtgat > 2:890630/1‑239 (MQ=255) ttgggcacaatttctatttTTATTTGCGCTTGTATTCACAAACTGTTAATTACAAATTCAGGGGGGAAAAAAATAAAAACCCAC‑ATTTT‑GAGGGGTAGTTGGTGGCGT‑GGAATTGTCC‑CA‑GACAAAT‑AAAAAAACGGGATTTGCC‑ATGATGAGCAAAATTAATAAG‑AAACAGGCGGGGAATAAGT‑TGAAGGAGATTGGCGTTAACTTTACCGCCATGATTTCTACCCGAATGCCtgatg < 2:699376/224‑1 (MQ=255) gcgcAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTACTTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTT‑TAGTGGTAGTTTGTGGCGG‑ATACCTATTT‑TA‑AACAAAA‑ACAAAAAATAGAGGTGCA‑ATGTAGTCTGGAAGAAATAAG‑CAACAAACAGAGAAAAAAT‑GGACAGACGATGTTGCAGAATTTATCACCAGTACTTCTACCCGaaaacatattgtaca > 1:662324/1‑226 (MQ=255) gcAATATTCATTCTTATTTGCGAGTTGATCCACGAACTGTTAATTACATAGTCACGGTGGAAAAAAATAAAAAACCGC‑ATTTT‑TGGTGGTAGTTTGTGGCGG‑TGAATTTTTC‑CA‑GAAAAAT‑AAAAAAACGGGAGTTGCC‑ATGATGAGCGAAAGAAAGAAG‑CAACAGGCAGTGAATAAGT‑GGAAAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACgtg < 2:98986/238‑1 (MQ=255) tATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTT‑TAGTGGTAGTTTGTGGCGG‑GTAATTTTTT‑CA‑GACAAAT‑AAAAAAAATAGAGTTGCC‑ATGATTAGCGGAAGTAATAAA‑AAAAACGCAATGTAAAAAA‑TTAGAGAGATTTTTGCCAAATTTTCCGCCACGAGTTTTATCCGCATACCCCATTAACAGGGGGGTAAACTaaaa > 2:276076/1‑239 (MQ=255) caaatttttAATTACATATTCAGGGGGGAAAAAAATAAAAAACCAA‑ATTTT‑TAGGGGTATTTTGGGGCGG‑TGATTTTTAC‑CA‑GACAAAT‑AAAAAAACGGGAGTTGCC‑ATGATGAGCAAAAGTAATAAG‑CAACAGGCAGTGAATAAGT‑TGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGaa < 2:975898/232‑1 (MQ=255) aaTTAAATATCCACGGTGGAAAAAAATATAAACCCAC‑ATTTT‑GAGGGGGAGTTGGTGGCGG‑TGATTTTTTC‑CA‑GACAAAA‑AAAAAATCTGGAGTGACC‑ATAAGGAGCAAAAGTAATAAG‑CAACAGGAAGTAAATAAGT‑GGACAGAGTTTGTCGCTATTTTTACCGCCATGATTTCTTCCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGtcgtcg < 2:1063473/239‑1 (MQ=255) attaattatTCCCGGTGGCAAAAAATATAAAACCAC‑TTTTT‑TAGGGGTAGTTTGGGGCGG‑TGAATTTTTC‑CA‑AAAAAAT‑ACAAAAACTGGAGTTGCC‑ATGATGAGCGAAAGTAATAAG‑CAACAGGCAGAGAATAAGT‑TGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGa < 2:966527/233‑1 (MQ=255) tACATATTCGCGGTGAAAAAAAATAAAAAACCAA‑TTTTT‑TAGTGGTAGTTTGGGGCGG‑TGAATTTTTC‑CA‑CAAAAAT‑CAAAAAACTGGATTTGCC‑ATGATGAGCGAAAGTAATAAG‑CAACAGGCAGTTAAAAAGT‑TGAAAGAGATTTTCGCTACTTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATg < 2:956107/239‑1 (MQ=255) ttttcgttgttgaaaaaaaTATAAACACAC‑ATTTT‑AAGTGTGTGTTTGTGGCGG‑GTACTTTTTC‑CA‑GAAAAAA‑AAAAAAGGGGTAGTCGCC‑TTGATGAGCGAATATAATAAC‑AAACAGGCAGTGAATAATT‑TGACAGGTCTGGGCGTTATTTTTACCGCCATGATGTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGa < 1:211337/226‑1 (MQ=255) ttgtCACGGGGGAAAAAAATAAAAAACCAC‑ATTTT‑TAGTGTTAGTTTGGGGCGG‑TAAATTTTTC‑CA‑GACAAAA‑ACAAAAACGGGATTTGCA‑ATGAGGAGCGAAAGAAATAAG‑CAACAGGCAGTGAATAAGT‑TGACAGAGATTGTCGATAACTTTTCCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGa < 2:134118/236‑1 (MQ=255) tatTCGCGGGGACAAAAAATATAAAACCAC‑ATTTT‑TAGGGGTATTTTGTGGCGG‑TAAATTTTTC‑CA‑GACAAAT‑ACAAAAACGGGAGTTGCC‑ATGATGAGCAAAAGTAATAAG‑CAACAGGCAGTGAATAAGT‑TGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGa < 2:884414/239‑1 (MQ=255) tatTCAGGGTGGAAAAAAAAATAAAACCAC‑ATTTT‑TGGTGGAAGTTTGTGGCGG‑TGAATTTTTC‑CA‑GACAAAT‑AAAAAACCTGGATTTGCC‑ATGAGGAGCGAAAGAAATAAG‑AAACGGGTAGGGAATAAGT‑TGAAAGAGATTGCCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGa < 2:1120739/239‑1 (MQ=255) atTCACGGTGGCAAAAAATATAAAACCAC‑ATTTT‑TAGTGGTAGTTTGTGGCGG‑TGAATTTTTT‑CA‑GACAAAT‑ACAAAAAAATGAGTTGCC‑ATGATGAGCGGAAAGAATAAA‑CAACAGGCAGTGAATAAGA‑TTGCAAAGATTGTCGCTAACTTTACCGCCACGATTTTTTCCCCAATGCCCGATGACGGTGTGGGTAAACTAAAACAACTAAAAGATGCCGCAACGACGTCGATggggga > 2:816373/1‑237 (MQ=255) atTCACGGTGGCAAAAAATATAAAACCAC‑ATTTT‑TAGTGGTAGTTTGTGGCGG‑TGAATTTTTT‑CA‑GACAAAT‑ACAAAAAAAGGAGTTGCC‑ATGATGGGGGGAAGGAAAAAG‑CAAAAAGCCGGGAATAAAT‑TGACAAAGAATGTTGCTTACCTTTCCCCCCTGATTTTTACCCCAAAGCCTGATGACGTGGGGGGGAAAATAAAACAACTAAAGGATACCCAAACGACCTCGCTggggga > 2:385551/1‑237 (MQ=255) gggtggaaaaaaaaTAAAAAACCAA‑TTGTG‑TAGTGGGTGTTTGGGGGTG‑ATAATTTTCC‑CA‑AACAAAT‑AAAAATAAGGGATGTGCA‑AGAATGGACAAAATAAATAAG‑AAACGGGTAGTGAAAATGT‑TGACAGAGTTTGTCGTTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAAtt < 1:741636/231‑1 (MQ=255) agggTGGAAAAAAATA‑AAAACCACAATTTT‑TAGGGGTATTTTGGGGCGG‑TAAATTTTCC‑CA‑GACAAAT‑ACAAAAAGTGGAGTTGCC‑ATGATGAGGGAAAGTAATAAG‑CAACAGGAAGTAAATAAGT‑TGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATACCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAAtt < 2:1229995/237‑1 (MQ=255) ggTGGAAAAAAATAAAAACCCAC‑ATTTT‑TGGTGGTTGTTTGGGTCGG‑TTAATTTTCC‑CA‑AAAAAAT‑AAAAAAACTGGATTTGCC‑ATGATGAGCAAAAGTAATAAG‑CAACAGGCAGTAAATAAGT‑TGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTAt < 2:484054/239‑1 (MQ=255) gtagaaaaaaaTAAAAAACCCC‑ATTTT‑TAGTGGAAGTTTGTGGCGG‑TGAATTTTAC‑AA‑GAAAAAA‑AAAAAAACTGGAGTTGCC‑AGGATGAGCAAAAGTAAAAAG‑CAACAGGCAGTAAATAAGT‑TGACAGAGTTTGTCGGTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTAt < 2:515855/233‑1 (MQ=255) gggaaaaaaaTAAAAACCCAC‑ATTTT‑TAGTGGTAGTTTG‑GGCGGTTGATTTTTAC‑AA‑GAAAAAT‑CAAAAAACGGGGTTTGCC‑ATTATGAGCGAAAGTAATAAG‑CACCAGGAAGTGAAAAAGT‑TGACGGGTATTGTGGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTAt < 2:418404/233‑1 (MQ=255) aaaaTAAAAACCCCT‑ATTTT‑TGGTGTTATTTTGGGGCGT‑GTAATTTTTC‑AA‑GAAAAAT‑ACAAAAACTGGAGTTGCC‑TTGAGGAGCGAAAGTAATAAG‑CAACAGGCAGTTAATAAGT‑TGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATa < 2:696782/239‑1 (MQ=255) aaaTATAAAAAATC‑ATTTT‑TGTTGTTTGTTTTTGGGGG‑GTAAATTTTC‑CA‑AACAAATAAAAAAAAGTGGGGTGACC‑ATGGGGAGGAAAAAAAAAAAG‑ACACGGACAGTAAATAAGT‑GGAAAGAGATTGCCGCTATTTTACCCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATa < 1:385551/239‑1 (MQ=255) aaTATAAACCCAC‑TTTTT‑TATGGTTATTTTGGGGCGG‑TGATTTTTCC‑CA‑GACAATG‑AAAAAACCGGGAGTTCCC‑AGGAGAAGGAAAAGTAATAAG‑CAACAGACTGTGATTAAGT‑GGACAGATATGGCGGTTACCTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACg < 2:517384/239‑1 (MQ=255) aaTAAAAAACAAA‑ATTTG‑TAGGGGTAGTTGGTGGCGG‑TGAATTTTCA‑CA‑GAAAAAT‑ACAAAACATGGGGTGGCC‑ATGAGGAGGGAAAGTAATAAG‑CAACAGGCAGTTAATAAGT‑TGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACg < 2:969570/239‑1 (MQ=255) c‑aTTTT‑TAGTGGTAGTTTGTGGCGG‑TGAATTTTTT‑CA‑GACAAAA‑ACAAAAAATGGAGTTGCC‑ACGATGAGCGAAAGTAATAAG‑CAACAAGCAGGGAATAAAT‑TGACAGAGAATGTCGCTAACCTTAACCCCATGATTTTTTCCCGAAAGCCCGATTACCGGGTGGGTAAAATAAAAAAACTAAAAGATGCCGAAACGTCGTCTATGGGGGAAAATAACTACCaaaacaagtttgaacac > 2:1070911/1‑223 (MQ=255) aGTGGTAGTTTGGGGCGG‑TGAATTTTCC‑CA‑GACAAAT‑ACAAAAACTGGATTTGCC‑AGAATGAGCAAAAGTAATAAG‑CAACAGGCAGTGAATAAGT‑TGAAAGAGATGGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTAt < 2:828842/210‑1 (MQ=255) aGTTTGTGTGGG‑TAATTTGTTC‑CA‑GAAAAAT‑AAAAAAATGGTGGTTGCA‑AGGAGGAGCGAAAGAAAGATC‑AAAATGTCGGTGAAAAGGTGTGA‑AGTGTTTGTCGCAATGTTTCCCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGa < 1:276076/239‑1 (MQ=255) aGTTTGGGGCGG‑TAAATTTTTC‑AA‑AACAAAT‑ACAAAAACTGGAGTTGCA‑AGGAGGGGCAAAAGTAATAAG‑CAACAGGAAGTAAATAAGT‑TGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGa < 2:925957/239‑1 (MQ=255) gTTTGGGGCGG‑TAAATTTTCC‑GA‑AAAAAAT‑ACAAAAACGGGATTTGCC‑AGGAAGAGCAAAAGTAAAAAG‑CAACAGGAAGTGAAAAAGT‑TGAAAGAGTTTGCCGATAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGAt < 2:893312/239‑1 (MQ=255) gtgGCGG‑TGAATTTTTC‑CA‑GAAAAAT‑ACAAAAACTGGAGTTGCC‑ATGAGGGGGAAAAGTAATAAG‑CAACAGGAAGTGAATAAGT‑TGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGAc < 2:1024431/239‑1 (MQ=255) ggggCGG‑T‑AATTTTTCACA‑GAAAAAC‑A‑AAAAACTGGTATTGCCAATGAGAGGCAAAAGTAATAAG‑CAACGGGCAGGAAATAAGT‑TGACGGGGATGGCCGTTACTTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGAc < 2:1181739/237‑1 (MQ=255) | TTTCTACCAGTACCTGCAAGTCTTTGGCTAAAGGCCAGCTATTCAGCATCGTTAATTATCCGCAGTTGTGATAAGCGCAGTGTATTTCGCAAAACATTGCCATTCCCTGCTCTGGCGCAATATTCATTCTTATTTTCGCGTTGATTCACGAACTGTTAATTACATATTCACGGTGGCAAAAAATATAAAACCAC‑ATTTT‑TAGTGGTAGTTTGTGGCGG‑TGAATTTTTC‑CA‑GACAAAT‑ACAAAAACTGGAGTTGCC‑ATGATGAGCGAAAGTAATAAG‑CAACAGGCAGTGAATAAGT‑TGACAGAGATTGTCGCTAACTTTACCGCCATGATTTCTACCCGAATGCCTGATGACGTGGTGGATAAACTAAAACAGCTAAAGGATGCCGAAACGTCGTCGATGGGGAAAATTATCTACCATACGATGTTCGACAACATGCAAAAAGCGATTGAC > NC_000913/3206206‑3206655 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |