| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,665,631 | G→A | 10.4% | S60L (TCA→TTA) | gadX ← | acid resistance regulon transcriptional activator, autoactivator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,665,631 | 0 | G | A | 10.4% | 373.2 / 5.5 | 131 | S60L (TCA→TTA) | gadX | acid resistance regulon transcriptional activator, autoactivator |
| Reads supporting (aligned to +/- strand): ref base G (73/41); new base A (2/13); total (76/55) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.75e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01 | |||||||||||
Only 100 of 131 total aligned reads displayed.
GTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑ACTTATCTACTCGAATTTGGC‑TTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAG‑TGATTGCATAGTTGACTTAATA‑TTACATAAACATATTACTGTTTATTAATGTAGCACGCCGC > NC_000913/3665399‑3665862 | gTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCg < 2:583610/239‑1 (MQ=255) ttCAGAAGCCGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTAGTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCgt < 2:842409/239‑1 (MQ=255) ttCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGCGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAG‑GCCTCCTCCTTGAGAATCGGGAGAAAT‑ATTGAAA‑GCgt > 1:357177/1‑239 (MQ=255) agcGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTGTCCCtt < 2:72870/237‑1 (MQ=255) gtaataaGTTCTCAACCTCAAGAAAAACAGATAACAACGCAAAGATTAATTCTCTTTTACGTAG‑GATTTCTGCATAGCGAAGATTCTTATGCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATAGCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTGTCCCTTGac‑ac < 2:531993/233‑1 (MQ=255) ttcacATCCTCAAGAAAAACAGATAACAACGGAAAGATTAATTCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTGTCCCTTGAC‑ACGAATACaaa < 1:1245409/235‑1 (MQ=255) tGCTCATCCTCAAGAAAAACAGATAACAACGCCAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTTAGCATCGGGAGAAAT‑AATGAAA‑GCGGGTCCCTTTCC‑ACGAAAACaaa > 1:1255281/1‑239 (MQ=255) tGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATATTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTAT‑A‑TGTGCATGAAGATTTAAT‑GCCTCATCCTTGAGCTTCTGGAGAAAT‑AATGAAA‑GAGGGTCCCTTGAC‑ACAaaaaaaaa > 1:1040359/1‑239 (MQ=255) cTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAAt > 2:534787/1‑239 (MQ=255) cTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGGGTCCCTTGAC‑ACGAATACAAAAt > 2:1256413/1‑239 (MQ=255) cTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑A‑TGTGAATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTGTCCCTTGAC‑ACGAAAAAAAAAt > 1:1136680/1‑239 (MQ=255) tCATCCTCAAGAAAAACAGATAACACCGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGAAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGGGCATAGGGAGAAAT‑AATAAAA‑GGGTGTCCCTTGAC‑ACGAaaaaaaaaat > 1:959030/1‑237 (MQ=255) tCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGTAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTTCTGTGATGAACGAGTAATGAAGAAACTTTTTG‑A‑TGTGCATGAAGATTTACA‑TCCTCCTCCTTGTGCATCGAGAGAAAT‑AATGCAA‑GCGTGTACCTTGaaaaacaaaaaaaaat > 1:556728/1‑224 (MQ=255) tCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGGGAAAT‑AATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAAtt > 2:532828/1‑239 (MQ=255) tCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTATTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGTAGAACGAGTAATGAAGACACTTTTTA‑C‑TTTGCATGAAGATTGAAT‑GCCTCCTACTTGTGCATCGGTTGAAAT‑AATGAAA‑ACGGGTCCCATAac‑agagaaaaaaaaat > 1:360326/1‑226 (MQ=255) aTCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑A‑TTTGCATGAAGTTTTAAT‑GCATCCTCCTTACGCATCGGGCGAAAT‑AATTAAA‑GATAGTCCCTTGCA‑CCAAAAACAAAAtttt > 1:529693/1‑239 (MQ=255) aTCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAAtttt < 2:1297100/239‑1 (MQ=255) ccTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTGTCCCTTGAC‑ACGAAAAAAAAAttttaa > 1:655987/1‑237 (MQ=255) ccTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCGTTTACGTAG‑CATTGCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑a < 2:556728/239‑1 (MQ=255) ccTCAAAGAAAGAAGATAAAAACGCAATGATTAGTCCTCTTTTACGTTGTCATTT‑TGCATAAGGAATATTCTTATTCCGCGCTAGTTGGTCAACTTCCTGAAAAACAGG‑AATATCGCTACTGCAGTGATGGACGAGTAATGAAGAAACTTTTTT‑A‑TTTGCATGATGATCTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTGAGCCTTGAG‑ACGAATGCAGAGTTTT‑C‑a < 1:468220/239‑1 (MQ=255) cttcaGAAAACCATATTACAACGCTAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAATTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑aa < 1:75719/235‑1 (MQ=255) cTCAAGAAAAACTGATAACAACGGAAAGATTTATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTTATGAACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑aa < 1:534787/239‑1 (MQ=255) cTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑aa < 2:529693/239‑1 (MQ=255) cTCAAGAAAAACAGATAACAACGAAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑aa < 2:655987/239‑1 (MQ=255) ccaaaaaaacaaaatataactgaaaGTTTAATTGTTTTTTACCTTG‑CATTTCCTGATAAGGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑Acca < 1:336015/217‑1 (MQ=255) cAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑Aaca < 2:546056/239‑1 (MQ=255) aaGAAAAACGAAAAACAAATAAAATATTAATGCGTTTTTACGTAG‑CATTTCTGCATAGCAAAGATTCTTATTCTGTGATAGGTGCGCAACTGCCTGAAAAACAAG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑TCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTTTCCCTTGAC‑ACGAATACAAAATGTT‑c‑accac < 1:1024595/239‑1 (MQ=255) aGAAAAACAAATAACAACGCAAAATTTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATGCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑Aacac‑a < 1:94251/239‑1 (MQ=255) aaaaCAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑Aacac‑ac < 2:61344/237‑1 (MQ=255) aaCAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGGGAAAT‑AATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AAAAC‑ACTTAt > 2:40620/1‑239 (MQ=255) acccAAAGATTAATTCTCTTTTTCGTGA‑CCTTTTTGCAAAGCGAAGATTCTTATTCTGCAATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCACCGGGAGAAAT‑AATGAAA‑GCGTGTTCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑ACTTATCTACTCGAAtt < 1:507493/236‑1 (MQ=255) ttttACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGCTAGTTGCGCAAATTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTCATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCCTCGGGAGAAAT‑AATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑ACTTATCTACTCGAATTTGGC‑TTGCCTCCGCaaaa > 2:1070255/1‑239 (MQ=255) ttttACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑ACTTATCTACTCGAATTTGGC‑TTGCATCCGCaaaa > 2:1174453/1‑239 (MQ=255) ttttACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑ACTTATCTACTCGAATTTGGC‑TTGCATCCGCaaaa > 2:94527/1‑239 (MQ=255) ttttACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑ACTTATCTACTCGAATTTGGC‑TTGCATCCGCaaaa > 2:974613/1‑239 (MQ=255) ttttACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑ACTTATCTACTCGAATTTGGC‑TTGACTCCCCaaaa > 1:18165/1‑239 (MQ=255) ttttACGAAG‑CATATCTGCATAGCGAAGGTTCTTATTCTGCGATCGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTAAAGTGATGAACGTGTAATGAAGCAAGTTTTTT‑A‑TGTGCATGATGATTTATT‑GCCTCCTCCTTGAGCATCGGTAGAAAT‑AATGAAA‑CCGCGTCCTTTGAT‑ATGTATCGAAAATTTC‑C‑AAAAC‑ACTTACCAACCCCAATTTTGC‑TTCAATACGCaaaa > 1:239877/1‑239 (MQ=255) tACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑ACTTATCTACTCGAATTTGGC‑TTGCATCCGCAAAAAcc > 2:134976/1‑239 (MQ=255) cATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTGTCCCTTGAC‑ACGCATACAAAATTTT‑C‑AACAC‑ACTTATCTACTCGAATTTGGC‑TTGCATCCGCAAAAACC‑AGGTCa > 2:834577/1‑238 (MQ=255) cATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGCGATGAACGAGGAATGAAGAAACTTTTTT‑A‑TGTGAATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGGGCAAT‑AATGACA‑GCGAGTCCCTTCAA‑ACGTATATAAATTTTT‑C‑AAAAC‑CATTCATAACTCGATTTTGCC‑TTGCATCCCCAAAAACA‑Agtaac > 1:722523/1‑234 (MQ=255) tAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑Aacac‑a > 2:328572/1‑185 (MQ=255) tAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑Aacac‑a < 1:328572/185‑1 (MQ=255) cGAAGATTCTTATTCTGCGATATTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑Gc > 2:752949/1‑147 (MQ=255) cGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑ACTTATCTACTCGAATTTGGC‑TTGCATCCGCAAAACCC‑AGGCCACCGCCATTAAAATa > 2:1252337/1‑239 (MQ=255) aTTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTGTCCCtt < 2:726584/151‑1 (MQ=255) tATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAGGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGAGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑ACTTATCTACTCGAATTTGGC‑TTGCATCCGCAAAAACC‑CGGCCAACGCCATTAAAATAGCGaaaaaca > 1:498476/1‑233 (MQ=255) tGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTCCTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑ACTTATCTACTCGAATTTGGC‑TTGAATCCGCACAAACC‑AGGTCACCGCCATTAAAATAGCGATCtttcccttt > 2:182347/1‑232 (MQ=255) tGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCACCTTGATCATCGGGAGAAAT‑AATGAAA‑GCTTGTCCCTTGAC‑CCGATTa > 1:726584/1‑151 (MQ=255) cGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTCCAGTGATGAACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑ac > 1:879100/1‑160 (MQ=255) cGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑ACTTATCTACTCGAATTTGGC‑TTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTa > 2:733632/1‑238 (MQ=255) ttGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑ACTTATCTACTCGAATTTGGC‑TTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAAc > 2:365936/1‑234 (MQ=255) gcgcAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑ACTTATCTACTCGAATTTGGC‑TTGCATCCGCAAAAACC‑AGGCCACCGCCATTAAAATAGCGAAATTAACCATAAACCAAggga > 1:1010255/1‑237 (MQ=255) gcgcAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAAAGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑ACTTATCTACTCGAATTTGGC‑TTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAAAAGCACTATTAACCATTAACCATgggg > 2:641902/1‑237 (MQ=255) cgcaattgtatGAAAAACGGG‑AATTTTCTTACTAAGTTTATGAACGAGTAATAAAGAAACTTTTTA‑A‑TGGCCAAAAAATTTTAAG‑CCCTCCACCTGGAGCAGCGGGAAAAAT‑AATGAAG‑GGGTGCCCCCAAAC‑ACAAATAAAAAATTTA‑A‑AACAC‑ATTTATCTACCCAATTTTGGC‑TTGAATCCGAAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTga < 2:943548/229‑1 (MQ=255) aatttccaaaaaaaCAAG‑AATACCTCTACTCAGGGGAAGAAAGAATAAGAAAAAAATTTTTTT‑A‑TGTAAAATAAGATTTAAT‑CCCCCCTCCTTGACCATGGGAAAAAAT‑AATAAAG‑GCGTGTCCCTTGAC‑ACGAATAAAAATTTTA‑C‑ACCCC‑ACTTATCTACTCGATTTTGGT‑TTGCACCCACAAAACCC‑GGTTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGaa < 2:358150/230‑1 (MQ=255) aatttcaaaaaaaaAGGAAATTTCCCTACGACATGGATAAACGAG‑AAAGAAAAAATTTTTTTGA‑GGTGAATGAAGATTAAGT‑CCCTCCCCCTGAAGCATCGGAAAAAAT‑AAGAAAA‑GCGTGCCCCTTGAC‑ACAAATACAAAATTTT‑C‑AACAC‑TCTTATCTACTCGAATTTGCC‑GTGCACCCGAAAAACCC‑AGATCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGaa < 2:1255281/231‑1 (MQ=255) tttccaaaaaaaCAGG‑AATATCTCTACTGAAGTAAGAAACGAGTAATGAAAAAATTTTTTT‑A‑TGGGAAGAAAGTTTTAAT‑GCCTCCTCCTTGGGCAGCGGGAGAAAA‑AATAAAG‑GGGTGTCCCTTGAC‑CCAAATA‑AAAATTTT‑CAAACCC‑TCTTATCTACCCAAATTTGGC‑TTGCACCCGAAAAAACC‑AGGCCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAata < 2:1136680/232‑1 (MQ=255) cTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑ACTTATCTACTCGAATTTGGC‑TTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATAtt > 2:44077/1‑239 (MQ=255) aaaaaacaagatatattctcactacATTAATGAACGAGAAGTGAAGAATCTTTGTT‑G‑GGTGCATTAAGATCTACT‑CCCTCATCTTTGGCCAGAGTGAAAAAT‑AATGCAT‑GATTTCTCCTTGAA‑AGAAAAACAACTCTAT‑C‑ACCTC‑TCTTATCAACAAGAATTTGGT‑GTCCATCGGCAAAAATG‑AGTCCTCCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATAttt < 1:733632/219‑1 (MQ=255) aaaCAGG‑AATCTCTCTACTACAGTTAAGAAAGAAAAATAAAAAAATTTTTTT‑A‑GGTGCATGAAGATTAAAT‑CCCCCCCCCTTGAACATGGGGAAAAAT‑AATGAAA‑GCGTTCCCTTTGAC‑ACAAATAAAAAATTTC‑C‑AACAC‑ACTTATCTACTCAATTTTGGC‑TTGCACCCGCAAAACCC‑GGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGt < 2:1010255/239‑1 (MQ=255) g‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑ACTTATCTACTCGAATTTGGC‑TTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCa > 2:236023/1‑239 (MQ=255) atatCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTGTCCCTTGAC‑ACGAATAAAAAATTTT‑A‑AACAC‑ACTTATCTACTCGAATTTGGC‑TTGAATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTACACATGGTGAAAAAACATTTATGTCttcaaa > 1:1104902/1‑234 (MQ=255) tctACTACAGGGATGAACGAGTAATAAAGAATCTTTTTA‑A‑TGTGAAAGAAATTTTAAC‑CCCTCCCCCTTGAGCATCGGAAAAAAT‑AATAAAA‑GCGTTCCCCTTGAC‑ACAAATACAAATTTTC‑C‑AACAC‑ATTTATCTACTCAATTTGGGC‑TTGCACCCAAAAAAACC‑AGGTCCCCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGaa < 2:665917/215‑1 (MQ=255) actacAGTGATGAACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑ACTTATCTACTCGAATTTGGC‑TTGCATCCGCAAAAACC‑AGGTCACCGCCCTTAAAATAGCGATATTCACCATTAACCATGGTGAGAAAATATTTATGTCTTGCAAACGAAAtaa > 1:699988/1‑237 (MQ=255) cAGTGATGAACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑aa > 2:385069/1‑118 (MQ=255) cAGTGATGAACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCATCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑ACTTATCTACTCGAATTTGTC‑TTGCATCCGCAAAAACC‑AGGTCCCCGCCATTACAATCGCGATATTCACCATTAACCATGGTGAGAATATATATATGTCTGGCAAAGGCAAATAGACa > 1:650116/1‑239 (MQ=255) cgaggaagaagtaaaaTAAAGATAGTTTTTT‑T‑TGTGAATGAAGAATTAAC‑TCCTACGTGTTGATCCTGCGGAAAAAT‑AACAAAA‑GCGTTCCCCTTGAA‑CAGAAAAAAAATGTGG‑C‑AACAC‑CTTTTTTTGTGAGTATTGGGT‑TTGCCCCCAAAAAAACC‑AGGTACCCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACaa < 1:926960/225‑1 (MQ=255) agtaatgaaagaaaaaaaaaaaaTTTTTTT‑AGTGGGAATAAATATTAAAT‑GCCTCCCCTTGGAGCAGGGGAAAAAAT‑AA‑GAAA‑GCGTGGCCCTTAAA‑ACAAAAAAAAAATTTTAC‑AACCT‑CTTTACCTATCAGATTTTGGC‑TGGCACCCGAAAAACCC‑AGGCCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACaa < 2:1104902/219‑1 (MQ=255) tgatgaACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTGTCCCTTGAC‑ACGAATACaaa > 2:889179/1‑107 (MQ=255) tgatgaACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑a < 1:519621/114‑1 (MQ=255) tgatgaACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑ACTTATCTACTCGAATTTGGC‑TTGCATCCGCAAAAACC‑AGGTACCCGCCATTAAAATAGCGATATTAACCATTAACCATGGGGAGAATATATTAATGTcattctcttaaacacatataac > 1:665917/1‑217 (MQ=255) taagcactgaaaaaTGAAAAACTTTTTTT‑A‑TGTGCATGAATTTTTAAG‑CCCCCCTCCTGGAACATGGGGAGAAAT‑AATAAAA‑GCTTGTCCTTTGAA‑ACAAATAAAAAATTTC‑C‑AACCC‑CTTTATCTACTCAATTTTGGC‑TTGCACCCAAAAAACCC‑AGGCCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACaa < 2:945130/225‑1 (MQ=255) atgaACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑aa > 1:886748/1‑113 (MQ=255) atgaACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑aa < 2:886748/113‑1 (MQ=255) atgaACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑ACTTATCTACTCGAATTTGGC‑TTGCATCCGCAAAAACC‑AGGTCACCTCCATTAAAATAGCGCTATTCACCATGAACAATTGTGAGAATAAATTTATGTCTTGCAATCGCAATTAGTCAATTc > 2:706516/1‑238 (MQ=255) atgaACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑ACTTATCTACTCGAATTTGGC‑TTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATg > 2:410580/1‑213 (MQ=255) atgaACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑ACTTATCTACTCGAATTTGGC‑TTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGAcctgtct > 2:859175/1‑233 (MQ=255) atgaACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑ACTTATCTACTCGAATTTGGC‑TTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTc > 2:1110994/1‑238 (MQ=255) atgaACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑ACTTATCTACTCGAATTTGGC‑TTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAACATTATTCACCATTAACCATGGGGAGAAAATATTTATATATTGAATACGCAATTAAAAAATTcc > 1:1226981/1‑239 (MQ=255) accgagaaaaaaaaaaaCTTTTTT‑A‑TGGGAATAAAATTTTAAT‑CCCTCCTCCTTGAGCATGGGGAAAAAA‑AAAGAAG‑GCGGGTCCTTTAAC‑AAAAATAAAAAATTTC‑C‑AACCC‑TCTTATCTACTAAATTTTGGA‑TTGCACCCGAAAAAACC‑AGTTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCAt < 2:959030/225‑1 (MQ=255) aaCGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑ACTTATCTACTCGAATTTGGC‑TTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAAAAGCGCTATTCACCATTAACCATGGTGAGAATCTATTTATATCTTTCATACGCAATTAAACAATTCCCaa > 1:1280265/1‑238 (MQ=255) cGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑ACTTATCTACTCGAATTTGGC‑TTGCATCCGCAAAACCC‑AGGTCACGGCCCTTAAAATAGCGCTATTCCCCATTAACACTGGTGAGAAAATATTCATTTCTTGCTAAAGAAATTAGACAATTCCAATga > 1:913389/1‑238 (MQ=255) taaaaattttttttt‑A‑TTTACATGATTATTTACC‑CCCCCCCTCTTCAGCATGGGGAAAAAT‑AAT‑AAG‑ATGTTCTCCATGACTACAAAAAAAAATTTTA‑C‑AACAC‑ACTTATATACAGTATTTTTGT‑TTCCATCAAAAAAACCC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAG‑TGAtt < 1:1285586/230‑1 (MQ=255) tttttttt‑A‑TTGGCATGAATTTTTAAC‑CCCTCCTCTTGGAGCATGGGAAAAAAT‑AAGGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTCT‑C‑AACAC‑TTTTATCTCCTCGAATTTGGC‑TTGCATCCACAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAG‑TGATTGCATAGt < 2:699988/237‑1 (MQ=255) aCTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑ACTTATCTACTCGAATTTGGC‑TTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGCATATATTTATGTCTTGAATAGGCAATTATACAATTCCAATGTAC‑GAATTCCATAGt > 2:1014665/1‑239 (MQ=255) cttttttgaggggaataaaattttAAG‑CCCTCCGTCATGAGCATGGGAAGAAAG‑AAAAAAA‑GTGTTCCCTTTGAC‑AGGAAAAAAAAATTGT‑C‑ACAGC‑ATTTATCTACCCGATTTGTGC‑TTGACCCAGAAATAACC‑GGGCGACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAG‑TGATTGCATAGt < 2:880558/218‑1 (MQ=255) ggcaggaaaTTTAATCGCCTCTCCTTTGACCAT‑GGGAAAAATAAATAAAG‑GCGTGTCCTTTGAC‑ACAAATA‑AAAATTTT‑C‑AAAACTATTTATC‑ACCTGAATTTTGG‑TTGCCACCCAAAAAACCAAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAG‑TGATTGCATAGTTGACTTAata‑t < 2:947642/231‑1 (MQ=255) taaattttAAT‑GCCCCCTCCTGGAGAACGGGAAAAAAA‑AATGAAA‑GGGGGCCCCTTGAC‑AAAAATAAAAAATTTA‑C‑AACAC‑TCTTATCTACCCGAATTTGGC‑TTGCACCCAAAAAACCC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAG‑TGATTGCATAGTTGACTTAATA‑TTACAt < 2:138100/234‑1 (MQ=255) gaatttttAAT‑CCCCCCTACTTGAACAGGGGGAAAAAT‑AAAGAAG‑GCGTCTCCCTT‑AC‑AAAAAAAAAAAATTTTAC‑AACCC‑TTTTATCTCCTAAAATTTGGC‑TTGCACCCAAAAAACCC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAG‑TGATTGCATAGTTGACTTAATA‑TTACAt < 2:1226981/234‑1 (MQ=255) aaataTTTACT‑GCCCCCCCCTGGAGCA‑GGGGAAAAAA‑AAAGAAAGGCTTTCCCCTAGAC‑AAGAAAAAAAATTTTC‑C‑ACCCC‑ATTTTTCTACTCTATTTGGGC‑TTGCACCCAAAAAACCC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAG‑TGATTGCATAGTTGACTTAATA‑TTACAt < 2:249728/235‑1 (MQ=255) agagTTAAC‑GCCTCGTCCTGGAGCATGGGGAAAAAT‑AAGAAAA‑GTGGCTCCTTAGAC‑A‑GAAAACAAAATTTTCC‑AACAT‑ATTTATCTACTAGATTTTGGC‑TTCCTCCCAAAAAAACC‑AGGTAGCCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAG‑TGATTGCATAGTTGACTTAATA‑TTACATaa < 2:239877/239‑1 (MQ=255) tttAAG‑CCCCCCGCCGTGAACAACGGGAAAAAA‑AAGAAAG‑GCTTCTCCCTTGAC‑ACAAAAAAAAATTTTC‑C‑AACAC‑ACTTATCTACCCAATTTGGGC‑TTGCACCCGAAAAAACA‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAG‑TGATTGCATAGTTGACTTAATA‑TTACATAAACa < 2:18165/239‑1 (MQ=255) tAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTGACCCTTGAC‑ACGAATACAAACTTTT‑C‑AACAC‑ACTTATCTACTCGAATTTGGC‑TTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCCTTAACCATGGTGAGATTATATTTATGTCTTGCATACGCAATCAAACAATTCCCAT‑TAGAGGTTTGCATAGtttcataaaaataaactaaaaaaa > 1:7115/1‑217 (MQ=255) aagcccgccgcatagAGCAGGGGGAAAAAT‑AATGAAC‑GCGTTACCATTGCA‑ACAAAAAAAAAATTTC‑A‑AACAC‑ACTTATCAACTGAAATTGGGC‑TTGCATCCAAAAAACCC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAG‑TGATTGCATAGTTGACTTAATA‑TTACATAAACatat < 2:51181/225‑1 (MQ=255) ctcctTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑ACTTATCTACTCGAATTTGGC‑TTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAG‑t > 2:1230571/1‑196 (MQ=255) ccatgagatggggaaaaaaa‑aaGGAAA‑GCTTTCCCCTAAAC‑ACAAAAACAAATTTTT‑C‑AAC‑C‑CCTTAACTTTCCAAAATTGGCTTTGCATCAACAAAAACC‑AGGTCTCCGCCATTAAAATAGCGATATACACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAG‑TGATTGCATAGTTGACTTAATA‑TTACATAAACATATTACTGTttat < 2:498476/223‑1 (MQ=255) tCGGGAGAAAT‑AATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑ACTTATCTACTCGAATTTGGC‑TTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAG‑TGATTGCATAGTTGACTTAata > 2:47405/1‑206 (MQ=255) cGGGAGAAAT‑AATAACA‑GCCTGTCCCTTGAC‑ACGCATACAAAATTTT‑C‑AACAC‑ACTTATCTACTCGACTTTGGC‑TTGCATCCGCCAAACCC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATCATCCATGTTGAGCATTTATTCATGTCTTGCATACGCAATTATACAATTCCCATGCAG‑TGATTGAATTGTTGATTTAAAA‑TTACATAAAAAAATACCTGTTATTTAAtatacc > 1:218223/1‑236 (MQ=255) gggAGAAAT‑AATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑ACTTATCTACTCGAATTTGGC‑TTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCCTGGTGAGAATCACTTTATGTCTTGCATACTCAATTAGACAATTCCCATGGAG‑TGATTGCATAGTTGAATTAATATTTACA‑AAAAAAATTTCTTTTTTTTAATGTAACa > 1:868180/1‑238 (MQ=255) aaaT‑AAAGAAA‑GCTTTCCATTTCAC‑ACAAAAACAAATTTCA‑C‑AACTC‑CCTTACCCACTCAAATTTGCC‑TTGCCACCCAAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACTCAATTAGACAATTCCCATGTAG‑TGATTGCATAGTTGACTTAATA‑TTACATAAACATATTACTGTTTATTAATGTAGCAcgccgc < 2:315135/239‑1 (MQ=255) | GTTCAGAAGCAGCGGTATAAAGTGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑A‑TGTGCATGAAGATTTAAT‑GCCTCCTCCTTGAGCATCGGGAGAAAT‑AATGAAA‑GCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑ACTTATCTACTCGAATTTGGC‑TTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAG‑TGATTGCATAGTTGACTTAATA‑TTACATAAACATATTACTGTTTATTAATGTAGCACGCCGC > NC_000913/3665399‑3665862 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |