| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,665,654 | T→A | 14.7% | V52V (GTA→GTT) | gadX ← | acid resistance regulon transcriptional activator, autoactivator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,665,654 | 0 | T | A | 14.7% | 290.3 / 14.0 | 121 | V52V (GTA→GTT) | gadX | acid resistance regulon transcriptional activator, autoactivator |
| Reads supporting (aligned to +/- strand): ref base T (64/36); new base A (6/14); total (71/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.35e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 123 total aligned reads displayed.
TGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑A‑C‑TTATCTACTCGAATTTGGC‑TTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAG‑TGATTGCATAGTTGACTTAATA‑TTACATAAACATATTACTGTTTATTAATGTAGCACGCCGC > NC_000913/3665421‑3665862 | ttcacATCCTCAAGAAAAACAGATAACAACGGAAAGATTAATTCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACaaa < 1:1245409/235‑1 (MQ=255)tGCTCATCCTCAAGAAAAACAGATAACAACGCCAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTTAGCATCGGGAGAAAT‑AATGAAAGCGGGTCCCTTTCC‑ACGAAAACaaa > 1:1255281/1‑239 (MQ=255)tGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATATTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTAT‑ATGT‑GCATGAAGATTTAAT‑GCCTCATCC‑TTGAGCTTCTGGAGAAAT‑AATGAAAGAGGGTCCCTTGAC‑ACAaaaaaaaa > 1:1040359/1‑239 (MQ=255) cTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAAt > 2:534787/1‑239 (MQ=255) cTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGGGTCCCTTGAC‑ACGCATACAAAAt > 2:946846/1‑239 (MQ=255) cTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGGGTCCCTTGAC‑ACGAATACAAAAt > 2:1256413/1‑239 (MQ=255) tCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGGGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAAtt > 2:532828/1‑239 (MQ=255) tCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGAGGTTCCCTTGAC‑AAGAAAAAAAAAtt > 1:658009/1‑239 (MQ=255) aTCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATTT‑GCATGAAGTTTTAAT‑GCATCCTCC‑TTACGCATCGGGCGAAAT‑AATTAAAGATAGTCCCTTGCA‑CCAAAAACAAAAtttt > 1:529693/1‑239 (MQ=255) aTCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑TCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCAACGGGAGAAAT‑AATGAAAACGTGTCCCTTGAC‑ACGAAAACAAAAtttt > 1:947642/1‑239 (MQ=255) aTCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAAtttt < 2:1297100/239‑1 (MQ=255) ccTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAAAAAAAAAttttaa > 1:655987/1‑237 (MQ=255) ccTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCGTTTACGTAG‑CATTGCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑a < 2:556728/239‑1 (MQ=255) ccTCAAAGAAAGAAGATAAAAACGCAATGATTAGTCCTCTTTTACGTTGTCATTT‑TGCATAAGGAATATTCTTATTCCGCGCTAGTTGGTCAACTTCCTGAAAAACAGG‑AATATCGCTACTGCAGTGATGGACGAGTAATGAAGAAACTTTTTT‑ATTT‑GCATGATGATCTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGAGCCTTGAG‑ACGAATGCAGAGTTTT‑C‑a < 1:468220/239‑1 (MQ=255) cttcaGAAAACCATATTACAACGCTAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAATTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑aa < 1:75719/235‑1 (MQ=255) cTCAAGAAAAACAGATAACAACGAAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑aa < 2:655987/239‑1 (MQ=255) ccaaaaaaacaaaatataactgaaaGTTTAATTGTTTTTTACCTTG‑CATTTCCTGATAAGGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑Acca < 1:336015/217‑1 (MQ=255) cAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑Aaca < 2:546056/239‑1 (MQ=255) aaGAAAAACGAAAAACAAATAAAATATTAATGCGTTTTTACGTAG‑CATTTCTGCATAGCAAAGATTCTTATTCTGTGATAGGTGCGCAACTGCCTGAAAAACAAG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑TCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTTTCCCTTGAC‑ACGAATACAAAATGTT‑c‑accac < 1:1024595/239‑1 (MQ=255) aGAAAAACAAATAACAACGCAAAATTTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATGCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑Aacac‑a < 1:94251/239‑1 (MQ=255) aaaaCAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑Aacac‑a‑c < 2:61344/237‑1 (MQ=255) aaCAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGGGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AAAAC‑A‑C‑TTAt > 2:40620/1‑239 (MQ=255) acccAAAGATTAATTCTCTTTTTCGTGA‑CCTTTTTGCAAAGCGAAGATTCTTATTCTGCAATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCACCGGGAGAAAT‑AATGAAAGCGTGTTCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑A‑C‑TTATCTACTCGAAtt < 1:507493/236‑1 (MQ=255) ttttACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGCTAGTTGCGCAAATTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTCATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCCTCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑A‑C‑TTATCTACTCGAATTTGGC‑TTGCCTCCGCaaaa > 2:1070255/1‑239 (MQ=255) ttttACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑A‑C‑TTATCTACTCGAATTTGGC‑TTGCATCCGCaaaa > 2:974613/1‑239 (MQ=255) ttttACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑A‑C‑TTATCTACTCGAATTTGGC‑TTGCATCCGCaaaa > 2:1174453/1‑239 (MQ=255) ttttACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑A‑C‑TTATCTACTCGAATTTGGC‑TTGACTCCCCaaaa > 1:18165/1‑239 (MQ=255) ttttACGAAG‑CATATCTGCATAGCGAAGGTTCTTATTCTGCGATCGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTAAAGTGATGAACGTGTAATGAAGCAAGTTTTTT‑ATGT‑GCATGATGATTTATT‑GCCTCCTCC‑TTGAGCATCGGTAGAAAT‑AATGAAACCGCGTCCTTTGAT‑ATGTATCGAAAATTTC‑C‑AAAAC‑A‑C‑TTACCAACCCCAATTTTGC‑TTCAATACGCaaaa > 1:239877/1‑239 (MQ=255) tACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑A‑C‑TTATCTACTCGAATTTGGC‑TTGCATCCGCAAAAAcc > 2:134976/1‑239 (MQ=255) tAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑A‑C‑TTATCTACTCGAATTTGGC‑TTGCATCCGCAAAAACC‑Agg > 2:926960/1‑238 (MQ=255) cATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGCATACAAAATTTT‑C‑AACAC‑A‑C‑TTATCTACTCGAATTTGGC‑TTGCATCCGCAAAAACC‑AGGTCa > 2:834577/1‑238 (MQ=255) cATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGCGATGAACGAGGAATGAAGAAACTTTTTT‑ATGT‑GAATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGGGCAAT‑AATGACAGCGAGTCCCTTCAA‑ACGTATATAAATTTTT‑C‑AAAAC‑C‑A‑TTCATAACTCGATTTTGCC‑TTGCATCCCCAAAAACA‑Agtaac > 1:722523/1‑234 (MQ=255) cTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTCATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCTTCGGGAGAAAT‑ACTGAAAGCGTGTCCCTTGCC‑ACGAATACAAAATTTT‑C‑ACCAC‑A‑C‑TTATCTCATCGAATTTGGC‑TTGCATCCGCAAAAACA‑AGGACACccccc > 1:51181/1‑238 (MQ=255) tAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑Aacac‑a > 2:328572/1‑185 (MQ=255) tAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑Aacac‑a < 1:328572/185‑1 (MQ=255) cGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑A‑C‑TTATCTACTCGAATTTGGC‑TTGCATCCGCAAAACCC‑AGGCCACCGCCATTAAAATa > 2:1252337/1‑239 (MQ=255) cTTATTTGGCAATTGTTGCCAAACTTCCGAAAAAAAGGG‑AATATCTCTCAAAAAGTAATGAAGGAGAAATGAAG‑AACTTTTTT‑TTGTGGAATGAAGTTTTAAT‑CCCTCCTCC‑TTGGGAATGGGGAAAAAT‑AATGAAAGCTTGTCCCTTGAC‑AAAAATACAAAATTTA‑C‑ACCAC‑A‑C‑TTATCTACTAGATTTTGGC‑TTGCACCCGAAAAACCC‑AGGTCACCGCCATTAAAATAGCGATAtt < 2:357177/239‑1 (MQ=255) tGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTCCTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑A‑C‑TTATCTACTCGAATTTGGC‑TTGAATCCGCACAAACC‑AGGTCACCGCCATTAAAATAGCGATCtttcccttt > 2:182347/1‑232 (MQ=255) tGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGATTACAAAATTTT‑C‑AACAC‑A‑C‑TTATCTACTCGAATTTGGC‑TTGCATCGGCAAAAACC‑AGGTCACCCCAATTAAAAAAGGGAAAttaaacctt > 1:543555/1‑232 (MQ=255) tGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACACAATTTT‑C‑AACAC‑A‑C‑TTATCTACTCGAATTTGGC‑TTGCATCCGCAACAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCAtt > 2:1018220/1‑239 (MQ=255) tGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCACC‑TTGATCATCGGGAGAAAT‑AATGAAAGCTTGTCCCTTGAC‑CCGATTa > 1:726584/1‑151 (MQ=255) cGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTCCAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑ac > 1:879100/1‑160 (MQ=255) cGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑aa < 2:879100/161‑1 (MQ=255) ttGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑A‑C‑TTATCTACTCGAATTTGGC‑TTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAAc > 2:365936/1‑234 (MQ=255) tGCGCACTTTCCTGAAAAACGGT‑AATTTCTCTACAAAAGTGATGAACGAGTAATGAATAATCTTTTTT‑ATGG‑TAATGAAGATTTAAT‑CCCTCCTCC‑TTGAGCATCGGGAAAAAT‑AATGAAAGCTTTTCCCTTGAA‑AAAAATAAAAAATTTT‑C‑AACAC‑T‑T‑TTATCTACTCAATTTTGGT‑TTGCACCCGAAAAACCC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGt < 2:247198/239‑1 (MQ=255) gcgcAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑A‑C‑TTATCTACTCGAATTTGGC‑TTGCATCCGCAAAAACC‑AGGCCACCGCCATTAAAATAGCGAAATTAACCATAAACCAAggga > 1:1010255/1‑237 (MQ=255) gcgcAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAAAGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑A‑C‑TTATCTACTCGAATTTGGC‑TTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAAAAGCACTATTAACCATTAACCATgggg > 2:641902/1‑237 (MQ=255) cgcaattgtatGAAAAACGGG‑AATTTTCTTACTAAGTTTATGAACGAGTAATAAAGAAACTTTTTA‑ATGG‑CCAAAAAATTTTAAG‑CCCTCCACC‑TGGAGCAGCGGGAAAAAT‑AATGAAGGGGTGCCCCCAAAC‑ACAAATAAAAAATTTA‑A‑AACAC‑A‑T‑TTATCTACCCAATTTTGGC‑TTGAATCCGAAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTga < 2:943548/229‑1 (MQ=255) gcAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGCA‑CCGAATACAAAATTTT‑C‑AACAC‑A‑A‑TTCACTACTCGAATTTGGC‑TTGCATCCGCAAAAACC‑AGGTAACCCCCATTAAAATAGCGATATTCACCATTAACCAGGGGgaa > 1:1254492/1‑238 (MQ=255) acatttctaaaaaaaGAGA‑TATATCTCTCATAAAGGAATG‑ACGAGAAAAGAAAAAACTTTTTT‑ATGT‑GGAATAAAATTTTAT‑GCCCCCCCCTTTGAGCATGGGAAAAAAA‑AAGAAAAGCGTGTCCCTTGCC‑A‑GAAAAAAAAATTTT‑C‑AACCC‑C‑CTTTATCTACCCAATTTGGGC‑TTGCATCCGAAAAACCC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTgaga < 2:543555/229‑1 (MQ=255) aatttccaaaaaaaCAAG‑AATACCTCTACTCAGGGGAAGAAAGAATAAGAAAAAAATTTTTTT‑ATGT‑AAAATAAGATTTAAT‑CCCCCCTCC‑TTGACCATGGGAAAAAAT‑AATAAAGGCGTGTCCCTTGAC‑ACGAATAAAAATTTTA‑C‑ACCCC‑A‑C‑TTATCTACTCGATTTTGGT‑TTGCACCCACAAAACCC‑GGTTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGaa < 2:358150/230‑1 (MQ=255) aatttcaaaaaaaaAGGAAATTTCCCTACGACATGGATAAACGAG‑AAAGAAAAAATTTTTTTGAGGT‑GAATGAAGATTAAGT‑CCCTCCCCC‑TGAAGCATCGGAAAAAAT‑AAGAAAAGCGTGCCCCTTGAC‑ACAAATACAAAATTTT‑C‑AACAC‑T‑C‑TTATCTACTCGAATTTGCC‑GTGCACCCGAAAAACCC‑AGATCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGaa < 2:1255281/231‑1 (MQ=255) tttccaaaaaaaCAGG‑AATATCTCTACTGAAGTAAGAAACGAGTAATGAAAAAATTTTTTT‑ATGG‑GAAGAAAGTTTTAAT‑GCCTCCTCC‑TTGGGCAGCGGGAGAAAA‑AATAAAGGGGTGTCCCTTGAC‑CCAAATA‑AAAATTTT‑CAAACCC‑T‑C‑TTATCTACCCAAATTTGGC‑TTGCACCCGAAAAAACC‑AGGCCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAata < 2:1136680/232‑1 (MQ=255) cTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAAGACAAAATTTT‑C‑AA‑AC‑ACC‑TTATCTACTGGAATTTGAC‑TTGAATCCGCCAAAACC‑AGCGCACCACCACTAAAATAGCAATCTTCACCacctgccccttaacaaca > 1:83721/1‑221 (MQ=255) cTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑A‑C‑TTATCTACTCGAATTTGGC‑TTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATAtt > 2:44077/1‑239 (MQ=255) aaaCAGG‑AATCTCTCTACTACAGTTAAGAAAGAAAAATAAAAAAATTTTTTT‑AGGT‑GCATGAAGATTAAAT‑CCCCCCCCC‑TTGAACATGGGGAAAAAT‑AATGAAAGCGTTCCCTTTGAC‑ACAAATAAAAAATTTC‑C‑AACAC‑A‑C‑TTATCTACTCAATTTTGGC‑TTGCACCCGCAAAACCC‑GGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGt < 2:1010255/239‑1 (MQ=255) aGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑A‑C‑TTATCTACTCGAATTTGGC‑TTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCtt > 2:12461/1‑238 (MQ=255) g‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑A‑C‑TTATCTACTCGAATTTGGC‑TTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCa > 2:236023/1‑239 (MQ=255) atatCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑A‑C‑TTATCTACTCGAATTTGGC‑TTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTAACCATTAACCATGTTGAGAATATATTTATGCCTTGCAt > 2:170549/1‑238 (MQ=255) atatCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATAAAAAATTTT‑A‑AACAC‑A‑C‑TTATCTACTCGAATTTGGC‑TTGAATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTACACATGGTGAAAAAACATTTATGTCttcaaa > 1:1104902/1‑234 (MQ=255) tctACTACAGGGATGAACGAGTAATAAAGAATCTTTTTA‑ATGT‑GAAAGAAATTTTAAC‑CCCTCCCCC‑TTGAGCATCGGAAAAAAT‑AATAAAAGCGTTCCCCTTGAC‑ACAAATACAAATTTTC‑C‑AACAC‑A‑T‑TTATCTACTCAATTTGGGC‑TTGCACCCAAAAAAACC‑AGGTCCCCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGaa < 2:665917/215‑1 (MQ=255) cAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATTCAAAATTTT‑C‑aa < 1:385069/118‑1 (MQ=255) cAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCATCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑A‑C‑TTATCTACTCGAATTTGTC‑TTGCATCCGCAAAAACC‑AGGTCCCCGCCATTACAATCGCGATATTCACCATTAACCATGGTGAGAATATATATATGTCTGGCAAAGGCAAATAGACa > 1:650116/1‑239 (MQ=255) cgaggaagaagtaaaaTAAAGATAGTTTTTT‑TTGT‑GAATGAAGAATTAAC‑TCCTACGTG‑TTGATCCTGCGGAAAAAT‑AACAAAAGCGTTCCCCTTGAA‑CAGAAAAAAAATGTGG‑C‑AACAC‑C‑T‑TTTTTTGTGAGTATTGGGT‑TTGCCCCCAAAAAAACC‑AGGTACCCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACaa < 1:926960/225‑1 (MQ=255) tgatgaACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACaaa < 1:889179/107‑1 (MQ=255) tgatgaACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACaaa > 2:889179/1‑107 (MQ=255) tgatgaACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑a > 2:519621/1‑114 (MQ=255) tgatgaACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑a < 1:519621/114‑1 (MQ=255) tgatgaACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑A‑C‑TTATCTACTCGAATTTGGC‑TTGCATCCGCAAAAACC‑AGGTACCCGCCATTAAAATAGCGATATTAACCATTAACCATGGGGAGAATATATTAATGTcattctcttaaacacatataac > 1:665917/1‑217 (MQ=255) taagcactgaaaaaTGAAAAACTTTTTTT‑ATGT‑GCATGAATTTTTAAG‑CCCCCCTCC‑TGGAACATGGGGAGAAAT‑AATAAAAGCTTGTCCTTTGAA‑ACAAATAAAAAATTTC‑C‑AACCC‑C‑T‑TTATCTACTCAATTTTGGC‑TTGCACCCAAAAAACCC‑AGGCCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACaa < 2:945130/225‑1 (MQ=255) atgaACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑A‑C‑TTATCTACTCGAATTTGGC‑TTGCATCCGCAAAAACC‑AGGTCACCTCCATTAAAATAGCGCTATTCACCATGAACAATTGTGAGAATAAATTTATGTCTTGCAATCGCAATTAGTCAATTc > 2:706516/1‑238 (MQ=255) atgaACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑A‑C‑TTATCTACTCGAATTTGGC‑TTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATg > 2:410580/1‑213 (MQ=255) atgaACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑A‑C‑TTATCTACTCGAATTTGGC‑TTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGAcctgtct > 2:859175/1‑233 (MQ=255) atgaACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑A‑C‑TTATCTACTCGAATTTGGC‑TTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTc > 2:1110994/1‑238 (MQ=255) atgaACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑A‑C‑TTATCTACTCGAATTTGGC‑TTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAACATTATTCACCATTAACCATGGGGAGAAAATATTTATATATTGAATACGCAATTAAAAAATTcc > 1:1226981/1‑239 (MQ=255) atgaACGAGAAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACAAATACAAAATTTT‑C‑AACAC‑A‑C‑TTATCTACTCAAATTTGGC‑TTGCATCCTCAAAAACC‑AGGTCACCGCCATTAAAAAAGCGATATTCACCATTAACCATGCTGGTAATATATTTATGTCTTTCATACGAAATTAGACAATTc > 2:754674/1‑238 (MQ=255) accgagaaaaaaaaaaaCTTTTTT‑ATGG‑GAATAAAATTTTAAT‑CCCTCCTCC‑TTGAGCATGGGGAAAAAA‑AAAGAAGGCGGGTCCTTTAAC‑AAAAATAAAAAATTTC‑C‑AACCC‑T‑C‑TTATCTACTAAATTTTGGA‑TTGCACCCGAAAAAACC‑AGTTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCAt < 2:959030/225‑1 (MQ=255) cGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑A‑C‑TTATCTACTCGAATTTGGC‑TTGCATCCGCAAAACCC‑AGGTCACGGCCCTTAAAATAGCGCTATTCCCCATTAACACTGGTGAGAAAATATTCATTTCTTGCTAAAGAAATTAGACAATTCCAATga > 1:913389/1‑238 (MQ=255) gTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑A‑C‑TTATCTACTCGAATTTGGC‑TTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAG‑t > 2:1149030/1‑239 (MQ=255) taaaaattttttttt‑ATTT‑ACATGATTATTTACC‑CCCCCCCTC‑TTCAGCATGGGGAAAAAT‑AAT‑AAGATGTTCTCCATGACTACAAAAAAAAATTTTA‑C‑AACAC‑A‑C‑TTATATACAGTATTTTTGT‑TTCCATCAAAAAAACCC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAG‑TGAtt < 1:1285586/230‑1 (MQ=255) tttttttt‑ATTG‑GCATGAATTTTTAAC‑CCCTCCTCT‑TGGAGCATGGGAAAAAAT‑AAGGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTCT‑C‑AACAC‑T‑T‑TTATCTCCTCGAATTTGGC‑TTGCATCCACAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAG‑TGATTGCATAGt < 2:699988/237‑1 (MQ=255) tttttttt‑ATGT‑GATTGAAGTTTCACT‑CCCTCCCCC‑TTGAACATAGAGAAAAAA‑AAGAAACGTTTGTCCTGTGAT‑CAAAATAAAAAAATTA‑A‑AACAC‑A‑C‑TTATCATGTAGATTTTGTA‑TGTGACCCGCAAAACCC‑AGTGCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAG‑TGATTGCATAGt < 1:134976/237‑1 (MQ=255) aCTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑A‑C‑TTATCTACTCGAATTTGGC‑TTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGCATATATTTATGTCTTGAATAGGCAATTATACAATTCCAATGTAC‑GAATTCCATAGt > 2:1014665/1‑239 (MQ=255) cttttttgaggggaataaaattttAAG‑CCCTCCGTC‑ATGAGCATGGGAAGAAAG‑AAAAAAAGTGTTCCCTTTGAC‑AGGAAAAAAAAATTGT‑C‑ACAGC‑A‑T‑TTATCTACCCGATTTGTGC‑TTGACCCAGAAATAACC‑GGGCGACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAG‑TGATTGCATAGt < 2:880558/218‑1 (MQ=255) tttattgacATAAATATTTAAT‑GTCCCCTCC‑TTGAGCAGCGGGAAAAAT‑AAGGAACGCTTCCCCTTTGAC‑ACAAATAAAAATTTTA‑C‑AACAA‑T‑C‑TTATTTACACAAATTTGCC‑TTCACCCCGCAAACACA‑AGTTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAG‑TGATTGCATAGTTGACt < 2:401604/231‑1 (MQ=255) ggcaggaaaTTTAATCGCCTCTCCT‑TTGACCAT‑GGGAAAAATAAATAAAGGCGTGTCCTTTGAC‑ACAAATA‑AAAATTTT‑C‑AAAACTA‑T‑TTATC‑ACCTGAATTTTGG‑TTGCCACCCAAAAAACCAAGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAG‑TGATTGCATAGTTGACTTAata‑t < 2:947642/231‑1 (MQ=255) gCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑A‑C‑TTATCTACTCGAATTTGGC‑TTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATATCGATATTCACCATTACCCATGGTGAGAATTTATTTATGTCTTGCATACGCAATTAGACAATCCCCATGTAG‑Tgctgtctcttataaacaacaaaa > 1:1134145/1‑217 (MQ=255) taaattttAAT‑GCCCCCTCC‑TGGAGAACGGGAAAAAAA‑AATGAAAGGGGGCCCCTTGAC‑AAAAATAAAAAATTTA‑C‑AACAC‑T‑C‑TTATCTACCCGAATTTGGC‑TTGCACCCAAAAAACCC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAG‑TGATTGCATAGTTGACTTAATA‑TTACAt < 2:138100/234‑1 (MQ=255) agagTTAAC‑GCCTCGTCC‑TGGAGCATGGGGAAAAAT‑AAGAAAAGTGGCTCCTTAGAC‑A‑GAAAACAAAATTTTCC‑AACAT‑A‑T‑TTATCTACTAGATTTTGGC‑TTCCTCCCAAAAAAACC‑AGGTAGCCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAG‑TGATTGCATAGTTGACTTAATA‑TTACATaa < 2:239877/239‑1 (MQ=255) tAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGACCCTTGAC‑ACGAATACAAACTTTT‑C‑AACAC‑A‑C‑TTATCTACTCGAATTTGGC‑TTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCCTTAACCATGGTGAGATTATATTTATGTCTTGCATACGCAATCAAACAATTCCCAT‑TAGAGGTTTGCATAGtttcataaaaataaactaaaaaaa > 1:7115/1‑217 (MQ=255) aagcccgccgcatagAGCAGGGGGAAAAAT‑AATGAACGCGTTACCATTGCA‑ACAAAAAAAAAATTTC‑A‑AACAC‑A‑C‑TTATCAACTGAAATTGGGC‑TTGCATCCAAAAAACCC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAG‑TGATTGCATAGTTGACTTAATA‑TTACATAAACatat < 2:51181/225‑1 (MQ=255) cctcc‑tTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑aa < 2:725862/63‑1 (MQ=255) cctcc‑tTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑aa > 1:725862/1‑63 (MQ=255) ctcc‑tTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑A‑C‑TTATCTACTCGAATTTGGC‑TTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAG‑t > 2:1230571/1‑196 (MQ=255) ccatgagatggggaaaaaaa‑aaGGAAAGCTTTCCCCTAAAC‑ACAAAAACAAATTTTT‑C‑AAC‑C‑C‑C‑TTAACTTTCCAAAATTGGCTTTGCATCAACAAAAACC‑AGGTCTCCGCCATTAAAATAGCGATATACACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAG‑TGATTGCATAGTTGACTTAATA‑TTACATAAACATATTACTGTttat < 2:498476/223‑1 (MQ=255) tCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑A‑C‑TTATCTACTCGAATTTGGC‑TTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAG‑TGATTGCATAGTTGACTTAata > 2:47405/1‑206 (MQ=255) cGGGAGAAAT‑AATAACAGCCTGTCCCTTGAC‑ACGCATACAAAATTTT‑C‑AACAC‑A‑C‑TTATCTACTCGACTTTGGC‑TTGCATCCGCCAAACCC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATCATCCATGTTGAGCATTTATTCATGTCTTGCATACGCAATTATACAATTCCCATGCAG‑TGATTGAATTGTTGATTTAAAA‑TTACATAAAAAAATACCTGTTATTTAAtatacc > 1:218223/1‑236 (MQ=255) gggAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑A‑C‑TTATCTACTCGAATTTGGC‑TTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCCTGGTGAGAATCACTTTATGTCTTGCATACTCAATTAGACAATTCCCATGGAG‑TGATTGCATAGTTGAATTAATATTTACA‑AAAAAAATTTCTTTTTTTTAATGTAACa > 1:868180/1‑238 (MQ=255) aaaT‑AAAGAAAGCTTTCCATTTCAC‑ACAAAAACAAATTTCA‑C‑AACTC‑C‑C‑TTACCCACTCAAATTTGCC‑TTGCCACCCAAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACTCAATTAGACAATTCCCATGTAG‑TGATTGCATAGTTGACTTAATA‑TTACATAAACATATTACTGTTTATTAATGTAGCAcgccgc < 2:315135/239‑1 (MQ=255) aTACAAAATTTT‑C‑AACAC‑A‑C‑TTATCTACTCGAATTTGGC‑TTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAG‑TGATTGCATAg > 2:610798/1‑159 (MQ=255) | TGCTCATCCTCAAGAAAAACAGATAACAACGCAAAGATTAATGCTCTTTTACGTAG‑CATTTCTGCATAGCGAAGATTCTTATTCTGCGATAGTTGCGCAACTTCCTGAAAAACAGG‑AATATCTCTACTACAGTGATGAACGAGTAATGAAGAAACTTTTTT‑ATGT‑GCATGAAGATTTAAT‑GCCTCCTCC‑TTGAGCATCGGGAGAAAT‑AATGAAAGCGTGTCCCTTGAC‑ACGAATACAAAATTTT‑C‑AACAC‑A‑C‑TTATCTACTCGAATTTGGC‑TTGCATCCGCAAAAACC‑AGGTCACCGCCATTAAAATAGCGATATTCACCATTAACCATGGTGAGAATATATTTATGTCTTGCATACGCAATTAGACAATTCCCATGTAG‑TGATTGCATAGTTGACTTAATA‑TTACATAAACATATTACTGTTTATTAATGTAGCACGCCGC > NC_000913/3665421‑3665862 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |