New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 39468239 (0.130)6 (0.080) 5/280 9.8 14.8% intergenic (+5/‑48) rrfC/aspT 5S ribosomal RNA of rrnC operon/tRNA‑Asp
?NC_000913 = 4040680 60 (0.850)intergenic (+45/+225) rrfA/mobB 5S ribosomal RNA of rrnA operon/molybdopterin‑guanine dinucleotide biosynthesis protein B
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGC‑TCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTG  >  NC_000913/4040539‑4040795
                                                                                                                                             |                                                                                                                    
gtCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTa                                                                                                                     <  2:196953/143‑1 (MQ=35)
   ccACCTGACCCCATGCCGAACTCAGACGTGAAACGCCGTAGCGCCGATGGTAGCGTGGGGTATCCTCATGCGATGGTAGGGAACTGCCAGGCATCAAATAAACCGAAAGGCTCAGACGGCAGACTGAGCCTTTCGTTGTAGCt                                                                                                                  >  1:182906/1‑143 (MQ=11)
        tGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACGGCCAGGCATCAAATAATACGAAAGGCTCAGTCGGAAGACTTGGCCTTTCGTTTTATCtgttgt                                                                                                             <  2:558430/143‑1 (MQ=255)
        tGACCCCATGCCGAACTCAGAAGCGAAACGCCGCAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCtgttgt                                                                                                             <  2:42165/143‑1 (MQ=25)
                  ccGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGATCAGTCGGAAGACTGGGCCTTTCGCTTTATCTGTTGTTTGTCGGTGa                                                                                                   >  1:550714/1‑143 (MQ=21)
                        tCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGc‑tc                                                                                            >  2:641651/1‑143 (MQ=35)
                        tCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGc‑tc                                                                                            >  1:117405/1‑143 (MQ=35)
                        tCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGc‑tc                                                                                            >  2:927161/1‑143 (MQ=35)
                          aGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGTACGC‑tctc                                                                                          >  2:27892/1‑143 (MQ=21)
                          aGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAGCGC‑tctc                                                                                          >  2:236663/1‑143 (MQ=25)
                          aGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTGTTATCTGTTGTTTGTCGGTGAACGC‑tctc                                                                                          >  2:661925/1‑143 (MQ=25)
                          aGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTAGTTTTATAAGTTGTTTGTCGGTGAACGC‑tctc                                                                                          >  2:379377/1‑143 (MQ=255)
                            atgTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGTATCTAATAAAACGAAAGGTTCTGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGC‑TCTCCt                                                                                        <  1:1089898/141‑1 (MQ=255)
                            aaGTGAATCGCCGTTGCTCAGATGGTGGTGTGGCGTCTCCTGATGCGAGAGTAGGGAACTGCCAGGCATCAGATATAATGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGC‑TCTCCt                                                                                        <  1:897330/143‑1 (MQ=11)
                            aaGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGC‑TCTCCt                                                                                        >  2:602676/1‑143 (MQ=35)
                               tgggaCGCCGGAGCGGCGAGGGTAGTGTAGGGTCTCCTCGGGCGGGAGTAGGGACCTGCGAGGCATCAACTGAAACGAGAGGCTCAGTCGGAAGACTGGGCCTTTCGTGTTATCTGTGGTTTGTCGGTGAACGC‑TCTCCTGAg                                                                                     <  1:210419/139‑1 (MQ=11)
                               tGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGC‑TCTCCTgtg                                                                                     >  1:99420/1‑141 (MQ=25)
                               tGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGC‑TCTCCTGAg                                                                                     >  1:174598/1‑143 (MQ=35)
                                gcacccccGCAGCGCCGTTCGCAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAACACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGC‑TCTCCTGAGt                                                                                    <  1:317256/137‑1 (MQ=11)
                                ataaCGCCTTAGGTTCGATGTTAGTGTATGGGCTCATCAAGTGAGAGTAGGGAACTGCCAGGCATCAAATAAACGGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGC‑TCTCCTGAGt                                                                                    <  2:281272/141‑1 (MQ=11)
                                 aaaCGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAGCGC‑TCTCCTGAgca                                                                                   >  2:201026/1‑141 (MQ=25)
                                 aaaCGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAAATAAAAGGCGGCGATATATACGAAAGGCTCAGTCGGAAGACTCGGCCTTTAGATTTATCCGTTCTCTGTCGACGAACGC‑TACCCTGAgca                                                                                   >  1:500640/1‑141 (MQ=2)
                                   aCGCCGTAGCGCCGGTGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAACGGCTCAGTCGGAAGACTGGGCCTTTCGTGTTATCTGTTGTTTGTCGGTGAACGC‑TCTCCTGAGTAgg                                                                                 <  2:1059759/143‑1 (MQ=255)
                                   aCGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGC‑TCTCCTGAGTAgg                                                                                 >  1:660045/1‑143 (MQ=34)
                                     gCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAGAACGAAAGGCTCAGTGGGAAGACTGGGCCTTTCGTTTTGTCGGTTGTTTGTCGGTG‑ACGCGTCTCCTGGGGAGGAc                                                                               >  2:620827/1‑143 (MQ=11)
                                         tAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGC‑TCTCCTGAGTAGGACAAAt                                                                           >  2:374691/1‑143 (MQ=35)
                                         tAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGC‑TCTCCTGAGTAGGACAAAt                                                                           <  2:396613/143‑1 (MQ=35)
                                               cGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGC‑TCTCCTGAGTAGGACAAATccgccg                                                                     <  2:254834/143‑1 (MQ=35)
                                               cGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTAGGTGAACGC‑TCTCCTGAGTCGGACAAATccgacg                                                                     >  2:597947/1‑143 (MQ=255)
                                               cGATGGTAGTGTGGGGTCTCCTCATGCGAGAGAAGGGAACTGCCAGGCGTCAAATAAAACGAAGGGCTCAGTCGGAAGACTGGGCCTATCGTTTTATCTGTTGTTTGTCGCTGAATGA‑CCTCCGTAGTATGTCAAATgcgccg                                                                     >  1:178596/1‑143 (MQ=11)
                                                  ttgTAGTGTGGGCCCTCCTGATGCGAGAGTAGGGAACCGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGC‑TCTCCTGAGTAGGACAAATCCGCCGGGa                                                                  <  1:230437/141‑1 (MQ=255)
                                                          tgGTGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGC‑TCTCCTGAGTAGGACAAATCCGCCGGGAGCGGAttt                                                          <  2:56256/143‑1 (MQ=25)
                                                            gggTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGC‑TCTCCTGAGTAGGACACATCCGCCGGGCGCGGATTTGa                                                        >  1:177744/1‑143 (MQ=25)
                                                            gggTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGC‑TCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGa                                                        >  2:778200/1‑143 (MQ=35)
                                                             ggTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTGTCGTTTTATCTGTTGTTTGTCGGTGAACGC‑TCTCCTGAGTAGGGCAAATCCGCCGGGAGCGGATTGGaa                                                       >  2:830546/1‑143 (MQ=255)
                                                              ttctcccgaggCGAGAGTAGCGAACTGCCATGCATCCACTAAAGCGAAAGGCTCAGTCGGAAGACTGGATTCTTCGTTTTTGCTGTTGTTTGTCGGTGAACGC‑ACTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAAc                                                      <  1:264853/133‑1 (MQ=1)
                                                              gTCTCTTCATGCGATAGTAGGTAACTGCCAGGGATCAAATAAAACGAGAGGCTCAGTCGGAAGACTGTGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGC‑TCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAAc                                                      <  1:482894/143‑1 (MQ=11)
                                                                   ctcATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGC‑TCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGc                                                 >  1:326630/1‑143 (MQ=33)
                                                                      aTGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTTTTGTTTGTCGGTGAACGC‑TCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGaa                                              <  2:174598/143‑1 (MQ=17)
                                                                      aTGCGAAAGTAGGGAACGGCCAGGCATAAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGATTTATATGTTGTTTGTCGGTGAACGC‑TCTCCTCAGTAGGCCAAATCCGCCGGGAGCGTATTTGAACGTTGCGaa                                              <  2:984880/143‑1 (MQ=11)
                                                                               tggggAACCGCCGGGAGTCAAATAGAATGAGGGGCTCAGGCTGAAGACTGGGCCTTTCGTTTTATCTGCTGTTTGTCGGTGAACGC‑TCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGcc                                     <  1:594936/141‑1 (MQ=11)
                                                                               tAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGC‑TCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGcc                                     >  1:206489/1‑143 (MQ=32)
                                                                                 gggAACGGCCAGGCAGCAACTAAAACGGGAGGCTCAGTGGGAAGCCTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGC‑TCTCCTGAGTAGGACAAATACGCCAGTAGCGTATTTGAACGTTGCGAAGCAACGGCCCg                                   <  1:689776/143‑1 (MQ=11)
                                                                                  ggAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGC‑TCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCgg                                  >  2:407320/1‑143 (MQ=32)
                                                                                  ggAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGC‑TCTCCTGAGTAGGACAAATCCGCCGGCAGCGCATTTGAACGTTGAGAAGCAACAGCCCgg                                  >  1:411790/1‑143 (MQ=255)
                                                                                   gAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGC‑TCCCCTGGAGAGGCCAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCCGa                                 >  1:167287/1‑143 (MQ=11)
                                                                                     aCTGCCAGGCATCAAATAAAACGAAAGGCTCGGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGC‑TCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCAGGacg                               >  1:1200215/1‑141 (MQ=12)
                                                                                       tGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGC‑TCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAgggg                             >  1:903235/1‑142 (MQ=17)
                                                                                       tGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGC‑TCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATCTGACCGTTGCGAAGCAACGGCACGGCgggc                             >  1:556926/1‑142 (MQ=255)
                                                                                        gCCAGGCATCACATAAGACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGC‑GCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGTCCGGAGGGTg                            <  1:676977/143‑1 (MQ=255)
                                                                                          cAGGCATGAAATAATACGAAAGTGTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGC‑TCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGc                          <  1:93820/143‑1 (MQ=255)
                                                                                            gtcATCAAGTAATACTAAAGGCTCAGTCGGGAGACTGGGCCGTTCGTTTTAGCTGTGGTTTGTCGGTGAACGC‑TCTCCTGAGTAGGACAAATTCGCCGGGAGCGGATTTTAACGTTGCGAAGCAACGGCCCGGAGGGTGGCgg                        <  2:356610/141‑1 (MQ=11)
                                                                                            gtcATCAAATAAAACGAAATGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGC‑TCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCgg                        <  2:356829/141‑1 (MQ=17)
                                                                                              cATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGC‑TCTCCTGAGTAGGACAAATCCGCCGGGCGCGGAGTTGAACGTTGCGAAGCCACGGCCCGGAGGGTGGCgggg                      >  2:997278/1‑142 (MQ=12)
                                                                                                tCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGC‑TCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGCGGCGGGCAg                    >  2:538838/1‑143 (MQ=17)
                                                                                                    gtAAAGCGAAAGGCTCAGTCGGGAGACTGGGCCTTTCGTTGTATCTGTTGTTTGTCGGTGAACGC‑TCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGAcg                <  2:507534/142‑1 (MQ=12)
                                                                                                       aaaCGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGC‑TCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGAcgccc             >  1:962905/1‑143 (MQ=32)
                                                                                                       aaaCGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGC‑TCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGAcgccc             >  1:133935/1‑143 (MQ=32)
                                                                                                               ggCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGC‑TCTCCTGCGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGGGGCGGGCAGGACGCCCGGCagaca     >  1:1125294/1‑139 (MQ=255)
                                                                                                                gCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGC‑TCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAAc    >  2:694466/1‑143 (MQ=32)
                                                                                                                  tCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGC‑TCTCCTGAGGAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCGGGACACCCGCCATaacccg  >  1:728234/1‑139 (MQ=255)
                                                                                                                                             |                                                                                                                    
GTCCCACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCTCATGCGAGAGTAGGGAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGGAAGACTGGGCCTTTCGTTTTATCTGTTGTTTGTCGGTGAACGC‑TCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGAACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTG  >  NC_000913/4040539‑4040795

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.