Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 4,001,644 Δ5 bp coding (220‑224/951 nt) corA → magnesium/nickel/cobalt transporter

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 4001644 4001648 5 62 [0] [0] 62 corA magnesium/nickel/cobalt transporter

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 40016430 (0.000)62 (0.860) 53/284 0.2 100% coding (219/951 nt) corA magnesium/nickel/cobalt transporter
?NC_000913 4001649 = 0 (0.000)coding (225/951 nt) corA magnesium/nickel/cobalt transporter

TGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCA  >  NC_000913/4001511‑4001789
                                                                                                                                          |                                                                                                                                            
tggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacactctgaacttggccagcgcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgcagacgacgccggcccgcaaCTCct                                                                                                                                          >  2:683111‑M2/139‑143 (MQ=255)
 ggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCctt                                                                                                                                         >  2:1212291‑M2/138‑143 (MQ=255)
   attgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttct                                                                                                                                       >  2:715673‑M2/136‑143 (MQ=255)
     tgatcgtgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgacgacgacgacggcctgcatCTCcttcttc                                                                                                                                     <  2:386231‑M2/10‑1 (MQ=255)
        tcttgtcgaaccggacgacgacgagcgactgcgcgtacaatcggaacttggccagagccgggcaacccgcccggaactggaacacatcgaagcatcggcgcgtttctttggagacgacgacggcctgcatcgccttctgcctc                                                                                                                                  >  2:409272‑M2/131‑138 (MQ=255)
         cttctcgaacccgacgacgccgagcgactgcccgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgacgcatcggcacgttgctttgaagacgacgacggcctgcatCTCcttcttcttct                                                                                                                                 <  1:215262‑M2/14‑1 (MQ=255)
          ttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgcagcagcggcacggttggttgaagacggcgacggcctgcagctccctctccggcct                                                                                                                                >  1:1018528‑M2/129‑136 (MQ=255)
              cgaaacggccgaggacgagcgactgcgcgtacaatctgaactgggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGaa                                                                                                                            <  1:661605‑M2/19‑1 (MQ=255)
                aaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGa                                                                                                                          <  2:1052535‑M2/21‑1 (MQ=255)
                  ccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcctggaactggaagacatcgaagcatcggcacgtctctttgaagacgacgacggcctgcatCTGCGTGTTCTTCTTTGACGATg                                                                                                                        >  1:1133154‑M2/121‑143 (MQ=255)
                  ccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATg                                                                                                                        <  2:1186589‑M2/23‑1 (MQ=255)
                  ccgcaccacgacgaccgaccgcgcgcacaatctcaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctccatCTCCTTCTTCTTCTTTGAAGATg                                                                                                                        <  2:1127176‑M2/23‑1 (MQ=255)
                   cggacgacggcgagcgacagcgcgtacaatctgaacttggccagagcccggcaacccgcccggaactggaagacagcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGc                                                                                                                       <  2:495776‑M2/24‑1 (MQ=255)
                   cggacgacgacgagcgactgcgcggacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGc                                                                                                                       <  2:666242‑M2/24‑1 (MQ=255)
                   cgcacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGc                                                                                                                       <  1:773212‑M2/24‑1 (MQ=255)
                    ggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTCCTTCTTCTTTGGCGATGCg                                                                                                                      >  2:202617‑M2/119‑143 (MQ=255)
                     gacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATgggg                                                                                                                     >  1:964486‑M2/118‑143 (MQ=255)
                     gacgacgacgagcgactgcgcgtacaatctgaacttggccagagccgggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCgg                                                                                                                     <  1:877516‑M2/26‑1 (MQ=255)
                                gcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGcc                                                                                                          >  2:29037‑M2/107‑143 (MQ=255)
                                   cctgcgcgtacaatctgaacttggccatagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGt                                                                                                       <  2:731358‑M2/40‑1 (MQ=255)
                                     tgcgcgggcaatctgaactgggccagaggctggcgacccgcgcggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTGTGAAGATGCGGAAGATCACGCCGGTaa                                                                                                     <  1:68455‑M2/42‑1 (MQ=255)
                                      gcgcctacaatcggaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcagcggcacgtttcttggaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAAc                                                                                                    <  1:214243‑M2/43‑1 (MQ=255)
                                         cgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTcc                                                                                                 <  2:969513‑M2/46‑1 (MQ=255)
                                           tacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGAGCACGCCGGTAACTGCAc                                                                                               >  2:947607‑M2/96‑143 (MQ=255)
                                               ttcttgatttgtccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACtgtg                                                                                           <  1:1070201‑M2/52‑1 (MQ=255)
                                               cgcggaccttggccagagcctggcaacgcgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACtgtg                                                                                           <  1:423544‑M2/52‑1 (MQ=255)
                                                 ctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGc                                                                                         <  1:943743‑M2/54‑1 (MQ=255)
                                                  tgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGCAGATGCGGAAGATAACGCCGGTAACTCCACTGTGGCa                                                                                        >  1:993528‑M2/89‑143 (MQ=255)
                                                     acttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCCGAAGCACACGGCCGTGCTTCCACCGTGGCAttt                                                                                     >  1:1143805‑M2/86‑143 (MQ=255)
                                                      cttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCatttc                                                                                    >  2:471647‑M2/85‑142 (MQ=255)
                                                      cttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacaacaacggactgcatCTCCTTCTTCTTATTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTa                                                                                    >  2:1100110‑M2/85‑143 (MQ=255)
                                                           ccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCTTTTACCATc                                                                               >  2:613739‑M2/80‑143 (MQ=255)
                                                            cagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACCCCACTGTGGCATTTACCATcc                                                                              >  1:1145525‑M2/79‑143 (MQ=255)
                                                              gagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGt                                                                            <  1:947938‑M2/67‑1 (MQ=255)
                                                                gcctggcaacccgcccggaacgggaagacatcgaagcatcggcacgtttctttgaagacgacggcggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGa                                                                          <  1:29250‑M2/69‑1 (MQ=255)
                                                                      caacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGgcatttaccatcacggatggtaa                                                                    <  2:1228903‑M2/75‑12 (MQ=255)
                                                                         cccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCt                                                                 >  2:500053‑M2/66‑143 (MQ=255)
                                                                         cccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCt                                                                 <  2:805134‑M2/78‑1 (MQ=255)
                                                                           cgcccggaactggaagacatcgaagcaccggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGt                                                               <  2:784713‑M2/80‑1 (MQ=255)
                                                                            gcccggaactgcaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCGTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGtt                                                              <  2:358622‑M2/81‑1 (MQ=255)
                                                                             cccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATTCGTGATGGTCGTCTGttt                                                             >  2:272605‑M2/62‑143 (MQ=255)
                                                                              ctagaactggaagacatctaagcatccgcacgtttctgtgaagacgacgacggcctgcatCTCCTTCTACTTCTTTGAAGATGCTGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTa                                                            <  2:1004528‑M2/83‑1 (MQ=255)
                                                                              ccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTa                                                            >  1:787202‑M2/61‑143 (MQ=255)
                                                                                 gaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTGGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTActc                                                         <  2:792873‑M2/86‑1 (MQ=255)
                                                                                     tggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTGTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGGGATGGTCGTCTGTTTACTCTgcg                                                     >  1:607598‑M2/54‑143 (MQ=255)
                                                                                      ggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgt                                                    >  2:554249‑M2/53‑143 (MQ=255)
                                                                                      ggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgt                                                    <  1:715673‑M2/91‑1 (MQ=255)
                                                                                               ggaggcatcgtcgcgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGaa                                           <  2:901367‑M2/100‑1 (MQ=255)
                                                                                               cgaagcatcggcacgtttctttggagacggggaccgcctgcatCCGCGGCTTCGGCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCTTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGaa                                           <  2:170599‑M2/100‑1 (MQ=255)
                                                                                                          cccgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCttt                                <  2:1091216‑M2/111‑1 (MQ=255)
                                                                                                             gtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCg                             >  2:344019‑M2/30‑143 (MQ=255)
                                                                                                               ttctttgaagacgaccacgtcttgcatCTCCTTCTTCTTCTTTGAAGATGCGGCAGATCACGCCGGTAACTCCACTGCCGCATTTACCATCCGTGATGTTCGTCTCTTTACTCTGCGTGAGCGTGAACTGCCCGCTCTTCGTc                           <  2:189481‑M2/116‑1 (MQ=255)
                                                                                                                   ttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTGTTCGTGTGTa                       >  2:500580‑M2/24‑143 (MQ=255)
                                                                                                                         acgacgccggcctgcatCTCCTTCTTCTTCGTTGCAGATGCGGAAGATTACGCCGGTCACTCCACTGTGGCATTTACCATCCGTGATGGTCTTCTGTTTTCTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTAt                 <  1:1240535‑M2/126‑1 (MQ=255)
                                                                                                                         acgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGCACTGCCCGCTTTTCGTCTGTATCGTAt                 >  1:805428‑M2/18‑143 (MQ=255)
                                                                                                                         acgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTAt                 >  2:194045‑M2/18‑143 (MQ=255)
                                                                                                                           gactacggtctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGc               <  2:1156118‑M2/128‑1 (MQ=255)
                                                                                                                           gacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGc               >  1:644507‑M2/16‑143 (MQ=255)
                                                                                                                                cggcctgctcCCTCTCCTTCTTCTTTGAAGCTGCGGAAGTTCACGCCCGTAACTCCACTGTGGCACTTACCACCCGTGATGGTCGTCTGTTTACCCTGCGTGACCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGcc          <  2:804767‑M2/133‑1 (MQ=255)
                                                                                                                                cggcctgcatCTCCTGCTTCTGCTTTGAAGATGCGGAAGATCCCGAGGGTAACTCCACTGCGGCAGTTACCTTCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGcc          <  2:341200‑M2/133‑1 (MQ=255)
                                                                                                                                 ggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGccc         >  2:594386‑M2/10‑143 (MQ=255)
                                                                                                                                        atCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTCTCGTCTGTATCGTATGCGTGCCCGTAGCCa  >  1:516361‑M2/3‑143 (MQ=255)
                                                                                                                                          |                                                                                                                                            
TGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCA  >  NC_000913/4001511‑4001789

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.