New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1979489	5 (0.070)	103 (1.440)	55/284	0.2	95.4%	intergenic (‑274/‑264)	insA/uspC	IS1 repressor TnpA/universal stress protein
	?	NC_000913	= 2290111	NA (NA)					intergenic (‑32/+1)	insH1/yejO	IS5 transposase and trans‑activator/pseudogene, autotransporter outer membrane homology,putative transport, Not classified, putative ATP‑binding component of a transport system

AAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGG‑‑TAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCTCCATACCCGGA  >  NC_000913/2289970‑2290253                                                                                                                                                |                                                                                                                                               aaGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGG‑‑TAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCa                                                                                                                                               >  2:1327/1‑143 (MQ=11)           ctTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGG‑‑TAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGTACTTGTTCGCACCTTCCATAACGCTGTa                                                                                                                                     <  1:764629/143‑1 (MQ=38)           ctTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGG‑‑TAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCATCCATAACACGGTa                                                                                                                                     >  1:14229/1‑143 (MQ=12)                gtGGTCTGACGGCGCTTCCTCCTGACTCCACTGTCGTCGAAGG‑‑TAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGccac                                                                                                                                <  2:1009780/142‑1 (MQ=14)                  ggTCTGACGGCGCTTACTGCTCAATTCACTGTGGGCGAAGG‑‑TAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGctacca                                                                                                                              <  1:896515/143‑1 (MQ=255)                   gTCTGACGGCGCTTACTTCTGTAGTCACTGTCGGCGACGGCTTGAACCAATG‑C‑AATGAGAAACCCTGTCCTATTGGTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAg                                                                                                                             <  1:554489/143‑1 (MQ=9)                     cTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGG‑‑TAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGaa                                                                                                                           <  2:1224579/143‑1 (MQ=255)                     cTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGG‑‑TAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGaa                                                                                                                           <  1:1070675/143‑1 (MQ=255)                          ggCGCTTACTGCTGAATTCACTGTCAGCGAAGG‑‑TAAGTTGATGACTCACGATGAACCCTGTTCTATAGCTACAGCTGACAAACATGATGTGATATCAGGGACATGTTCGCACACACCATAACGCAGTAGCCCCCCGAACAGag                                                                                                                      >  1:520994/1‑142 (MQ=14)                            cgcTTACTGCTGAATTCCCCGTCGGCGAAGG‑‑TAAGTTGATGACTCATGATGACCCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGatat                                                                                                                    <  1:706233/143‑1 (MQ=255)                            cgcTTACTGCTGAATTCACTGTCGGCGAAGG‑‑TAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACCGatat                                                                                                                    >  1:529926/1‑143 (MQ=255)                              cTTACTGCTGAATTCACTGTCGGCGAAGG‑‑TAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATCACGCTGTAGCCACCAGAACAGATATTg                                                                                                                  >  2:50940/1‑143 (MQ=255)                              cTTACTGCTGAATTCACTGTCGGCGAAGC‑‑TAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTg                                                                                                                  <  2:967362/143‑1 (MQ=255)                                tACTGCTGAATTCACTGTCGGCGAAGG‑‑TAAGTTGATGACTCATGATGAGCCCTGTTCTATAGCTCCAGATGACAACCATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCg                                                                                                                <  1:1014737/143‑1 (MQ=255)                                  ctgctgAATTCACTGTCGGCGAAGG‑‑TAGGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGa                                                                                                              >  2:791118/1‑143 (MQ=255)                                   tgctgAATTCACTGTCGTCGAAGG‑‑TAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGaa                                                                                                             <  2:1091588/143‑1 (MQ=255)                                   tgctgAATTCACTGTCGGCGCATG‑‑TAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGaa                                                                                                             <  2:399893/143‑1 (MQ=255)                                   tgctgAATTCACTGTCGGCGAAGG‑‑TAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGaa                                                                                                             >  2:196872/1‑143 (MQ=255)                                     ctgAATTCACTGTCGGCGAAGA‑‑TAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTGCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTACCATAACGCTGTAGCCAACAGAACCGacgttggggcacc                                                                                                           >  1:69038/1‑131 (MQ=14)                                          ttCACTGTCGGCGAAGG‑‑TAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGCACGACaaa                                                                                                      >  1:840134/1‑143 (MQ=255)                                               tGTCGGCGAAGG‑‑TAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATAACAGGGACTTGTTCGCACCTTCCATAACGCTGTAGACACCAGAACAGATATTGCGAAACGACAAAGAGaa                                                                                                 >  1:147317/1‑143 (MQ=255)                                               tGTCGGCGAAGG‑‑TAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGAACGCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTTCGGACCGACAAAGAGaa                                                                                                 >  1:147382/1‑143 (MQ=255)                                                 tCGGCGAAGG‑‑TAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAAc                                                                                               >  2:1068055/1‑143 (MQ=255)                                                   ggCGAAGG‑‑TAAGTTGATGACTCATGATGCCCCTTGTTCGTTGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAg                                                                                             <  2:40800/143‑1 (MQ=21)                                                    gCGAAGG‑‑TAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTGGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGa                                                                                            <  2:797954/143‑1 (MQ=255)                                                          g‑‑TAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCACAAAGGATGTAACCACCAGGACAGCGCTCGCGGAACGACAAAGAGAAAAGGAACCAGa                                                                                      >  1:816750/1‑143 (MQ=14)                                                             tAAGTAGATGCCCAATGATTGGCCCTCTTCTATGGCTCCAGACGCCAAACAGAATCGCATATCAGGGACTTGTTCGCACCTTCCATAACGCGGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGAt                                                                                     <  1:1032701/143‑1 (MQ=25)                                                              aggTTGATGACTCAGGATGAACCCTGGTCTATGGCTCCAGCTGACGACCGCCGGCGCATATCAGGGACTTGTTCGCACCTCCTCCAACGCTGTAGCCGCCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGAtt                                                                                    <  1:817800/141‑1 (MQ=21)                                                                gtggatgaCTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTGCCAGAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGa                                                                                  <  2:143134/140‑1 (MQ=255)                                                                 ttGGTGACTCAGGACGATGCCTGTTCTATGGCTGCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTGCAATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGAt                                                                                 <  1:1065020/143‑1 (MQ=25)                                                                 ttGATGACTCATGTTGATCCCTGTTCTATGGCTCCAGATGGCGAGCATGCTCTCATATCAGGGACTTGTTCGCACCTGCCATAACGCTGTAGCCCGCAGATCAGATATGGCGGAACGACAAAGAGAAACAGAACCAGATTGAt                                                                                 <  1:317552/143‑1 (MQ=21)                                                                 ttGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGAt                                                                                 <  1:351276/143‑1 (MQ=255)                                                                  tcatgaCTCATGATGGTCCGTGTTCTATGGTTGCAGATGACAAATATGCTCTCCTATCAGGGACTTGTTCGCACCGTCCATAACGCTGTATCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATg                                                                                <  1:148237/141‑1 (MQ=25)                                                                    atgaCTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATACCGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCa                                                                              <  2:203325/143‑1 (MQ=255)                                                                      gaCTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCAtt                                                                            <  1:595172/143‑1 (MQ=255)                                                                         tCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCCGGGACTTGTTCGCACCATCCATAACGCTGTAGCCCCCAGAACAGATATTGCGAAACCGCAAAGAGAAACAGAACCAGATTGATGCAtgtcc                                                                         >  1:312639/1‑139 (MQ=21)                                                                         tCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCaataag                                                                         >  2:782857/1‑138 (MQ=255)                                                                         tCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAg                                                                         >  2:730409/1‑143 (MQ=255)                                                                         tCATGATGAACCCCGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAg                                                                         <  2:1025300/143‑1 (MQ=255)                                                                             gatgaGCCCTGTGCTAGGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCttt                                                                     <  2:1126593/143‑1 (MQ=255)                                                                             gatgaACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCttt                                                                     <  2:14719/143‑1 (MQ=255)                                                                                   cccTGTTCTATGGCTCCAGTTGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCt                                                               >  1:1027460/1‑143 (MQ=255)                                                                                    ccTGTTCTATGGCCCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTa                                                              <  2:975405/143‑1 (MQ=255)                                                                                          cTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGcaac                                                        >  1:574871/1‑142 (MQ=255)                                                                                              ggCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTAGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCAACTGATGAaattaat                                                    >  1:175110/1‑143 (MQ=255)                                                                                               gCTCCACATTACAAACATGATCTCATATCAGAGACTTGGTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAaattaatt                                                   <  2:42662/143‑1 (MQ=255)                                                                                                cTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTg                                                  >  1:897053/1‑143 (MQ=255)                                                                                                cTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGAACAAGCGACACAAAACCAGATTGATGCATTGAGCTTTCATCCGATGAAGTTAATTg                                                  >  2:639323/1‑143 (MQ=37)                                                                                                  ccAGATGACCAACATGCTCTCATGTTAGGAACGTCGTCGCAGCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCt                                                <  1:937174/143‑1 (MQ=255)                                                                                                  ccAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCt                                                <  2:1091833/143‑1 (MQ=255)                                                                                                       tGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTaa                                           >  2:953487/1‑143 (MQ=255)                                                                                                       tGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTCCTGTTaa                                           >  2:149314/1‑143 (MQ=255)                                                                                                        gACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTaaa                                          >  2:588349/1‑143 (MQ=255)                                                                                                         ccAAACATGATCTCATAGCAGGGACGTGTGCGGACCTACCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTaaaa                                         <  1:1066168/142‑1 (MQ=255)                                                                                                           aaaCATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCATATGAAATTAATTGCTGCTAAAAGc                                       >  2:568118/1‑143 (MQ=255)                                                                                                              cATTATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCAtt                                    <  2:789697/143‑1 (MQ=255)                                                                                                               aTGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTg                                   >  2:367610/1‑143 (MQ=255)                                                                                                                tGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTgg                                  <  1:124656/143‑1 (MQ=255)                                                                                                                tGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGAGATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTgg                                  >  2:172961/1‑143 (MQ=255)                                                                                                                    ctcATATCAGGGACTTGTTCGCACCTACCATAACGCTGTAGCCACCAGAACAGATCTTGCGGAACGACAAAGAGAAACATAACCAGATTGATGCATTGAGCTTACATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTAc                              >  1:1193043/1‑143 (MQ=255)                                                                                                                     tcATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACa                             <  2:518806/143‑1 (MQ=255)                                                                                                                         atCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATCGATGCGATGAGCGTTCATCGTCTGAACCCAACGGCGGTTAAAAACATTGCGTCAAGaaa                         >  1:817066/1‑143 (MQ=255)                                                                                                                                  ttGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATa                >  2:1085575/1‑143 (MQ=255)                                                                                                                                    tttCGTACCTTCCATACCGCTGTCGCCACCAGAACAGATATTGCGGATCGACAAAGAGAAACAGAACCAGATTGCTGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGc              <  1:605947/142‑1 (MQ=255)                                                                                                                                            cTTCCATAACGCAGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGAGTGATGACTTGAGCGTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCTCAATAcc      >  1:483106/1‑143 (MQ=255)                                                                                                                                             ttCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAAACCCCATAGCTCCATAccc     >  1:14093/1‑143 (MQ=255)                                                                                                                                                cATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCTCCATACCCGGa  >  2:340791/1‑143 (MQ=255)                                                                                                                                                cATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCTCCATACCCGGa  >  2:1162150/1‑143 (MQ=255)                                                                                                                                                cATAACGCCGTAGCCACCAGAACAGATCTCGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCTCCATACCCGGa  <  2:862750/143‑1 (MQ=255)                                                                                                                                                |                                                                                                                                               AAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGG‑‑TAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTGTAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCTCCATACCCGGA  >  NC_000913/2289970‑2290253

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.