Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	1,619,080	Δ35 bp	intergenic (‑172/‑6)	marC ← / → marR	UPF0056 family inner membrane protein/transcriptional repressor of multiple antibiotic resistance

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	1619080	1619114	35	75 [0]	[1] 76	marC/marR	UPF0056 family inner membrane protein/transcriptional repressor of multiple antibiotic resistance

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1619079	0 (0.000)	69 (1.010)	55/272	0.1	99.3%	intergenic (‑171/‑41)	marC/marR	UPF0056 family inner membrane protein/transcriptional repressor of multiple antibiotic resistance
	?	NC_000913	1619115 =	1 (0.010)					intergenic (‑207/‑5)	marC/marR	UPF0056 family inner membrane protein/transcriptional repressor of multiple antibiotic resistance

TGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCT  >  NC_000913/1618974‑1619256                                                                                                                                              |                                                                                                                                              tcagcgaaaagtataaggggtaaacaaggataaagtgtcactctttagctagccttgcatcgcattgaacaaaacttgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaaCt                                                                                                                                              >  1:1011213‑M2/142‑143 (MQ=255) tcagcgaaaagtataaggggtaaacaaggataaagtgtcactctttagctagccttgcatcgcattgaacaaaacttgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaaCt                                                                                                                                              >  2:348475‑M2/142‑143 (MQ=255) tcagcgaaaagtataaggggtaaacaaggataaagtgtcactctttagctagccttgcatcgcattgaacaaaacttgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaaCt                                                                                                                                              >  2:873683‑M2/142‑143 (MQ=255)    gcgaaaagtacaaggggtaaacaaggataaagtgtcactcttttgctagccttgcatcgcattgaacaaaacttgaaccgatttagcaaagcgtggcatcggtcaattcattcatttgacttatacttgcctgggcaaCTAAt                                                                                                                                           <  1:866573‑M2/5‑1 (MQ=255)     cgaaaagtataaggggtaaacaaggataaagtgtcactctttagctagccttgcatcgcattgaacaaaacttgaacagcttttccaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaaCTAAtg                                                                                                                                          <  2:639829‑M2/6‑1 (MQ=255)         aaggataaggggtaaacaaggataaagtgtcactctttagctagccttgcatcgcattgaacaaaacttgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaaCTAATGTGaa                                                                                                                                      <  2:323796‑M2/10‑1 (MQ=255)           gtgtaaggggtaaacaaggataaagtgtctctctttagctagccttgcatcgcattgaacaaaacttgaatcgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaaCTAATGTGaaaa                                                                                                                                    <  1:466011‑M2/12‑1 (MQ=255)           gtataagcggtaaacaaggataaagtgtcactctttagctagccttgcatcgcattgaacaaaacttgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaaCTAATGTGaaaa                                                                                                                                    <  2:455684‑M2/12‑1 (MQ=255)            tataaggggtaaacaaggataaagtgtcactctttagctagccttgcatcgcattgaacaaaacttgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaaCTAATGTGAAAAg                                                                                                                                   >  2:537397‑M2/131‑143 (MQ=255)              taaggggtaaacaagcataaagtgtcactctttagctagccttgcatcgcattgaacaaaacttgaaccgatttagcaaaacgtggcatcggtcaattcatccatttgacttatacttgcctgcgcaaCCCATGTGAAAAGTa                                                                                                                                 >  1:433998‑M2/129‑143 (MQ=255)               aaggggtaaacaaggataaagtgtcactctttagctagccttgcatcgcattgaacaaaacttgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaaCTAATGTGAAAAGTAc                                                                                                                                >  2:628912‑M2/128‑143 (MQ=255)                  gggtaaacaaggataaagtgtcactctttagctagccttgcatcgcattgaacaaaacttgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacctatacttgcctgggcaaCTAATGTGCAACGTACcac                                                                                                                             >  1:803368‑M2/125‑142 (MQ=255)                      aaacaaggataaagtgtcactctttagctagccttgcatcgcattgaacaaaacttgaaccgatttagcaaagcgtggcattggtcaattcattcatttgacttatacttgcctgggcaaCTAATGTGAAAAGTACCAGCGAt                                                                                                                         <  2:292521‑M2/23‑1 (MQ=255)                       aacaaggataaagtgtcactctttagctagccttgcatcgcattgaacaaaacttgaaccgatttcgcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaaCTAATGTGAAAAGTACCAACGATc                                                                                                                        >  1:584934‑M2/120‑143 (MQ=255)                       aacaaggataaagtgtcactctttagctagccttgcatcgcattgaacaaaacttgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgactgggcaaCTAATGTGTCAAGTACCCGCGATc                                                                                                                        >  2:198023‑M2/120‑143 (MQ=255)                       aacaaggataaagtgtcactctttagctagccttgcatcgcattgaacaaaacttgaaccgatttaacaaaacgtggcatcggtcaattcattcatttgacttatccttgcctgggcaaCTAATGTGAAAAGTACCAGCGATc                                                                                                                        >  1:220454‑M2/120‑143 (MQ=255)                               taaagtgtcactatttagctagccttgcatcgcattgaacaaaacttgaaccgatttcgcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaaCTAATGTGAAAAGTACAAGCGATATGTTCAAt                                                                                                                >  1:343087‑M2/112‑143 (MQ=255)                                   gtgtcactctttagctagccttgcatcgcattgaacaaaacttgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaaCTAATGTGAAAAGTACCAGCGATCTGTTCAATGaaa                                                                                                            <  2:168091‑M2/36‑1 (MQ=255)                                      tcgctctttagctagccttgcatcgcagtgaacaaaacttgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaaCTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAatta                                                                                                         <  1:783761‑M2/39‑1 (MQ=255)                                      tcactctttagctagccttgcatcgcattgaacaaaacttgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaaCTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAatta                                                                                                         >  2:972294‑M2/105‑143 (MQ=255)                                      tcactctttagctagccttgcatcgcattgaacaaaacttgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaaCTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAatta                                                                                                         <  2:1165694‑M2/39‑1 (MQ=255)                                      tcactctttagctagccttgcatcgcattgaacaaaacttgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaaCTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAatta                                                                                                         >  1:490998‑M2/105‑143 (MQ=255)                                        actctttagctagccttgcatcgcattgaacaaaacttgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaaCTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAattatt                                                                                                       >  1:674707‑M2/103‑143 (MQ=255)                                         ctctttagctagccttgcatcgcattgaacaaaacttgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaaCTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTGTTc                                                                                                      >  2:241107‑M2/102‑143 (MQ=255)                                         ctctttagctagccttgcatcgcattgaacaaaacttgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaaCTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTc                                                                                                      <  2:1209981‑M2/42‑1 (MQ=255)                                             ttagctagccttgcatcgcattgaacaaaatttgatccgatttagcaaaacgtagaagcagtcaatacaatcatatgacttatacttgcctgggcaaCTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCAtt                                                                                                  <  2:66264‑M2/46‑1 (MQ=255)                                                        tggatcgcagtgaacaaaacttgaaccgatttagcaaaacggggcatcggtcaattcattcatttgacttatacttgcctgggcaaCTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTaa                                                                                       <  1:537397‑M2/57‑1 (MQ=255)                                                          catcgcattgaacaaaacttgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaaCTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATc                                                                                     >  2:932822‑M2/85‑143 (MQ=255)                                                              gcattgaacaaaacttgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaaCTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATAACAGTGGGGCGCTTAGTCCata                                                                                 >  1:810569‑M2/81‑143 (MQ=255)                                                               cattgaacaaaacttgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaaCTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCatat                                                                                <  1:1082287‑M2/64‑1 (MQ=255)                                                               cattgaacaaaacttgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgccggggcaaCTCAGGTGAAAAGTACCAGCCATCAGGTCAATGAAATTATTCCATTGGTCCGCTCAATCCatat                                                                                >  1:146164‑M2/80‑143 (MQ=255)                                                                  tgaacaaaacttgaaccgagttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaaCTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGt                                                                             <  2:1068357‑M2/67‑1 (MQ=255)                                                                     acaaaacttgaaccgatttagcaaaacgtgtcatcggtcaattcattcatttgacttatacttgcctgggcaaCTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTaa                                                                          >  2:473882‑M2/74‑143 (MQ=255)                                                                       aaaacttgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaaCTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATc                                                                        <  1:972294‑M2/72‑1 (MQ=255)                                                                       aaaacttgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaaCTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATc                                                                        >  2:556661‑M2/72‑143 (MQ=255)                                                                       aaaactggaacagaattagcaaagcgtggcatcggtcaattcattcatttgacttatacttgactgggcaaCTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATc                                                                        <  2:626244‑M2/72‑1 (MQ=255)                                                                        aaacttgaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaaCTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCa                                                                       <  1:309634‑M2/73‑1 (MQ=255)                                                                           cttgaatcgatttagcaaaccgtggcatcggtcaattcattcatttgacttatacttgcctgggcaaCTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCagaa                                                                    <  1:808037‑M2/76‑1 (MQ=255)                                                                              gaaccgctttagcaaaacgtggcatcggtcaattcattcatttgtcttatacttgcctgggcgaCTCATGTGACAAGTACCAGCGAACTGTTCAATGAAAGTATTTCATTGGGTCGCTTAAGCCATCTGGCTAATCCgaagaa                                                                 >  2:235076‑M2/65‑143 (MQ=255)                                                                              gaaccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaaCTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAgaggaa                                                                 >  2:1137575‑M2/65‑143 (MQ=255)                                                                                accgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaaCTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCATaacaaag                                                               >  1:372905‑M2/63‑143 (MQ=255)                                                                                accgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaaCTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCGTAAACCATATGGTTAATCAGaagaaag                                                               >  2:703715‑M2/63‑143 (MQ=255)                                                                                 ccgatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaaCTCATGTGAAAAGTACCAGCGATCTGTTCAATGACATTATTCCATTGGGTCGCTTAATCCATCTggttcatcaggcgaagga                                                              >  2:248546‑M2/62‑135 (MQ=255)                                                                                  cgatttagcaaaacgtggcatcggtcaattcattcatttgacttatactagcctgggcaaCTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCCTTGGGTCGCTGACTCCATATGGTTCATCAGAAGAAAGAt                                                             >  2:527706‑M2/61‑143 (MQ=255)                                                                                   gatttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaaCTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATc                                                            <  2:1086758‑M2/84‑1 (MQ=255)                                                                                     tttagcaaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaaCTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGc                                                          <  1:660736‑M2/86‑1 (MQ=255)                                                                                      ttagcaaaacgtggcatcggtcaattcatgcatttgacttatacttgcctgggcaaCTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGcc                                                         <  1:852054‑M2/87‑1 (MQ=255)                                                                                          caaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaaCTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCt                                                     >  1:453036‑M2/53‑143 (MQ=255)                                                                                          caaaacgtggcatcggtcaattcattcatttgacttatacttgcctgggcaaCTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCt                                                     >  2:72728‑M2/53‑143 (MQ=255)                                                                                                ggggcagcggtcaatttattcatttgacttatacttgcgtgggcaaGTAATGTGAAAAGTACTAGCGATCTGTTCAATGAAAGTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGa                                               <  1:250670‑M2/97‑1 (MQ=255)                                                                                                 tggcatcggtcaattcattcatttgacttatacttgcctgggcaaCTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAg                                              >  2:1102256‑M2/46‑143 (MQ=255)                                                                                                   gcatcgggcaattcattcatttgacttatacttgcctgggcaaCTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTa                                            <  2:887851‑M2/100‑1 (MQ=255)                                                                                                         gtcaattcattcatttgacttatacttgcctgggcaaCTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGCGTATCTGtc                                      >  2:156152‑M2/38‑143 (MQ=255)                                                                                                           caattacttccttcgacttatcattgccaagacaaCTAATGTGAAAAGTACCCGTGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGtctc                                    <  1:1205072‑M2/108‑1 (MQ=255)                                                                                                            agtgcattcgtttgacgtatacttgccttggcaaCTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTcc                                   <  1:1198353‑M2/109‑1 (MQ=255)                                                                                                               tcattcatttgacttatacttgcctgggcaaCTAATGTGAAAAGTACCAGCGATCTGTTCAATGGAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTTTCCGCt                                >  2:264792‑M2/32‑143 (MQ=255)                                                                                                               tcattcatttgacttatacttgcctgggcaaCTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGATTAATTAGTAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCTGCt                                >  2:704774‑M2/32‑143 (MQ=255)                                                                                                                 attcatttgacttatacttgcctgggcaaCTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTgg                              >  1:112420‑M2/30‑143 (MQ=255)                                                                                                                 attcatttgacttatacttgcctgggcaaCTAATGTGAAAAGTACCAGCGATCTGGTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTgg                              <  1:514531‑M2/114‑1 (MQ=255)                                                                                                                  ttcatttgccttatacttgcctgggcaaCTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGa                             <  2:547376‑M2/115‑1 (MQ=255)                                                                                                                  ttcatttgacttatacttgcctgggcaaCTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGctgta                             >  2:386354‑M2/29‑141 (MQ=255)                                                                                                                  ttcatttgacttatacttgcctgggcaaCTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGa                             <  2:712231‑M2/115‑1 (MQ=255)                                                                                                                   gtagttgacttagaCTTGCCTGGGCAACTAATGTGAAGAGTACCAGAGATCTGTGCAATGAAATTATTCCATTGGGTCGCTGATTCCATATGGTTAATCAGAAGGAAGATCGCCTGTTTAACGAGTATCTGTCTCCGCTGGat                            <  1:34799/130‑1 (MQ=255)                                                                                                                      tttgacttatacttgcctgggcaaCTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATAtt                         >  2:799718‑M2/25‑143 (MQ=255)                                                                                                                          acttctccttgcctgggcaaCTAATATGAAAAGTAACAGCGATCTGTTCAATTAAATTATACCATTGGGCCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGGATCTGTCTCCGCTGGATATTACcg                     <  1:905185‑M2/123‑1 (MQ=255)                                                                                                                          acttatacttgcctgggcaaCTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGTATCTTACcg                     >  1:63764‑M2/21‑143 (MQ=255)                                                                                                                            ttatacttgcctgggcaaCTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGGGTAGCTGTCTCCGCTGGGCATTaccggc                   >  2:1038142‑M2/19‑141 (MQ=255)                                                                                                                              atacttgcctgggcaaCTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTACTCAGAAGAAAGATCGCCTCCTTACCGAGTATCGGTCGCCGCTGGATATTACCGCGGc                 >  2:635681‑M2/17‑143 (MQ=255)                                                                                                                              atacttgcctgggcaaCTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGcgga                 >  2:809714‑M2/17‑142 (MQ=255)                                                                                                                                      ctgggcaaCTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTCTa         >  1:273603‑M2/9‑143 (MQ=255)                                                                                                                                        gggcaaCTTATGTGAAAAGTACCAGCGAGCTGTTCAATGAAATTATCCCATTGGGTAGCCTACTCTATATGGTTAATCAGAAGAAAGATCGCCTGCTGAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAg       <  1:938267‑M2/137‑1 (MQ=255)                                                                                                                                        gggcaaCTAATGTGACAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAg       <  1:963116‑M2/137‑1 (MQ=255)                                                                                                                                        gggcaaCTAATGTGAAAAGTACCAGCGATCTGTCCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAg       <  2:1123298‑M2/137‑1 (MQ=255)                                                                                                                                         ggcaaCTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCGATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGACTATCTGTCTCCACTGGATATTACCGCGGCAGAGCTTAAgg      >  1:975877‑M2/6‑143 (MQ=255)                                                                                                                                            aaCTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGc   >  2:301408‑M2/3‑143 (MQ=255)                                                                                                                                             aCTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCt  <  1:628912‑M2/142‑1 (MQ=255)                                                                                                                                              |                                                                                                                                              TGTCACTCTTTAGCTAGCCTTGCATCGCATTGAACAAAACTTGAACCGATTTAGCAAAACGTGGCATCGGTCAATTCATTCATTTGACTTATACTTGCCTGGGCAATATTATCCCCTGCAACTAATTACTTGCCAGGGCAACTAATGTGAAAAGTACCAGCGATCTGTTCAATGAAATTATTCCATTGGGTCGCTTAATCCATATGGTTAATCAGAAGAAAGATCGCCTGCTTAACGAGTATCTGTCTCCGCTGGATATTACCGCGGCACAGTTTAAGGTGCT  >  NC_000913/1618974‑1619256

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑