Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 3423696–3424534 3424534 1–839 35 [33] [32] 34 [rrfD]–[rrlD] [rrfD], [rrlD]

TACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAA  >  NC_000913/3424509‑3424677
                          |                                                                                                                                              
tACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTa                            <  2:315752/143‑1 (MQ=31)
 aCTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTaa                           <  1:765533/143‑1 (MQ=32)
  tgctgtAGGAGGGGACCGCCCGAGTCATGCTGTCCACCAGACACTCTCCGCAACCCGGACTCCGGGTCAACGTTAGAACATCAAGCATTTAAGGGTGGTATTTTAAGGACGGCTCCACGCAGACTGGCGTCCACACTTCTAAg                          <  1:613329/138‑1 (MQ=11)
  ctctTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAg                          <  2:999436/143‑1 (MQ=32)
  ctctTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAg                          <  1:698964/143‑1 (MQ=32)
   tctTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCCAACACTAAAGGGTGGTCTTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGc                         >  2:152565/1‑143 (MQ=12)
   tctTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGc                         <  2:1029707/143‑1 (MQ=32)
   tctTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGCCGTCCACACTTCTAAGc                         >  1:905733/1‑143 (MQ=17)
     tttAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTCGAACATCAAACATTAAAGGGTGGTATTTCGAGGTCGGCTCCATGCAGACTGGCGGCCCACCTTCTAAGCCt                       >  1:583794/1‑143 (MQ=11)
     tttAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCt                       >  1:776861/1‑143 (MQ=32)
     tttAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGAGATATTTCAAGGTCGGCTCCATGCAGACTGGCGGACACCCttgaaggcgc                       >  1:296921/1‑135 (MQ=1)
     gttAGGACGAGACCGCCCCATCCAAACTACCCACAAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCt                       <  2:782130/142‑1 (MQ=255)
       tAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTcc                     <  2:1131744/143‑1 (MQ=32)
         ggaggaGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCa                   <  2:836442/143‑1 (MQ=32)
          gaggagACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCAc                  >  2:172343/1‑143 (MQ=32)
           aggagCCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTCGAACATCAAACATTAAAGGGTGGTATTTCACGGGCGGCTCCATGCAGACTGGCGGCCACACTTCTACGCCTCCCAcc                 >  2:526948/1‑143 (MQ=11)
             gagaCCGCCCCAGTCAAACTACCCACCAGACACTGACCGCCACCCGGATTACGGCTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGCCGGCACCATGCAGCCTGGCGAACGCACGTCTAAGACTGCccccga               >  2:166442/1‑141 (MQ=11)
               gaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCACTGATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATc             <  1:312961/143‑1 (MQ=12)
                aCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCACACATTCAAGGGTGGGATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCCCAGTTATAAGCCTCCCACCTATcc            >  2:442592/1‑143 (MQ=11)
                aCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACAGCAAACATTAAAGGGCGGCATTTCAAGGACGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATca            >  1:1114952/1‑142 (MQ=255)
                aCCGCCCCACTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGCGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATcc            <  1:774514/143‑1 (MQ=17)
                 ccGCCCCAGTCAAACGACCCACCATACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCt           <  1:850187/143‑1 (MQ=17)
                  cGCCCCCGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTCAAGGGTGGTATTTCAAGGTCGGCTGCATGCCGACTGGCGTCCACACTTCTGAGCCTCCCGCGTATCCTa          >  1:1103365/1‑143 (MQ=11)
                  cGCCCCAGTCAAACTACCCCCCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTCAAGGGTGGATTATCAAGTTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTa          <  2:233881/143‑1 (MQ=11)
                  cGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTCCGGGTCGACGTGAGAACATCAAACCCTCAATTGCTGTATTTCAAGGTCGGCTCCCTGCAGCCTAGCGTCCACACTTCTCAGCCTCCCACCTATCCTa          >  2:579589/1‑143 (MQ=11)
                  cGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAAGATCAAACACTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCAAACTTCTAAGCCTCCCACCTATCCTa          >  1:688272/1‑143 (MQ=12)
                  cGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTGCTAAGCCTCCCCCCTATccgg          >  2:323087/1‑141 (MQ=12)
                  cGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTAAAAGTCGGCTCCATGCAAACTGGCGTCCACACTTATAAAACTACCACATATCCTa          >  1:853499/1‑143 (MQ=11)
                     cccAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATCACAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGCCCACAATTCTAGGCCTCCCACCTCTCCTccac       >  1:226714/1‑143 (MQ=11)
                        aGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATc    <  1:870035/143‑1 (MQ=32)
                         gTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCa   >  1:1144438/1‑143 (MQ=32)
                         gTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCa   <  2:770359/143‑1 (MQ=32)
                          tCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCaa  <  2:591756/143‑1 (MQ=32)
                          tCAAACTACCCACCAGACACTGTCCGCAACCCGGACTACGGGTCAACGTTAGAACATCAAACACTACCGGATGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACCCTTCTAAGCCCCCCCCCCACCCAAcacagcca  >  1:393001/1‑139 (MQ=11)
                          |                                                                                                                                              
TACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAA  >  NC_000913/3424509‑3424677

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: