New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1207790 =	11 (0.140)	63 (0.890)	48/406	NT	82.2%	coding (290/630 nt)	stfP	e14 prophage, uncharacterized protein
	?	NC_000913	1209619 =	17 (0.240)					pseudogene (1/501 nt)	stfE	pseudogene, e14 prophage, side tail fiber protein fragment family,Phage or Prophage Related

TTGCCACTGCATTGATAGGTGCGCTGACATTGTCATAATTTGCAACAACGGCAACACAGGCATTATTAAACGCAACCGGGAATACAACTGTATTTCCATCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1208041‑1207790 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCTCAGGACATTATCGGCAGGT  >  NC_000913/1209619‑1209849                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     tttCCACGGCATTGAAAGGTGCGCTGACATTGTCATAATTTGCAACAACGGCAACCCAGGCATTATTAAACGCAACCGGGAATACAACTGTATTTCCATCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCT                                                                                                                                                                                                                                                      <  1:628827/236‑1 TTGCCACTGCATTGATAGGTGCGCTGACATTGTCATAATTTGCAACAACGGCAACACAGGCATTATTAAACGCAACCGGGAATACAACTGTATTTCCATCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCCCCT                                                                                                                                                                                                                                                      >  2:823164/1‑239        TGCATTGATAGGTGCGCTGACATTGTCATAATTTGCAACAACGGCAACACAGGCATTATTAAACGCAACCGGGAATACAACTGTATTTCCATCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGCCCTAATGTAACCGTTCATGCATTAAGTTTTGCTCCTTCTCCCA                                                                                                                                                                                                                                               >  1:256615/1‑239                    TGCGCTGACATTGTCATAATTTGCAACAACGGCAACACAGGCATTATTAAACGCAACCGGGAATACAACTGTATTTCCATCCCCCCCAGAGGCAGACGCTTTTGCGGCATTCCACCACCAATGAATGATTACCGATTGTTCAATACCACCAATCATAACCGGCATAGCACTGAAACCGGTGCGTCCAAATGTAATCGTTCCTCTATTGAATTTTGTCCCCTTTCCCCAACAAACGTTTA                                                                                                                                                                                                                                   >  1:422627/1‑239                    TGCGCTGACATTCTCATAATTTGCAACAACGGCAACACAGGCATTATTAAACGCAACCGGGAATACAACTGTATTTCCATCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACACCCCATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTACCCGTGGTGGCATTTAGTTTTGCTCCTTCTCCCAAACCCACGTTat                                                                                                                                                                                                                                   >  1:634905/1‑237                               ttTCATAATTTGCAACCACGGCAAACAAGGCATTAATAAACGCAACCGGGAATTCAACTGTATTTCCATCCCCCCCAGAGGCCGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATCCCTCCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAG                                                                                                                                                                                                                        <  2:721175/237‑1                                           CAACAACGGCAACACAGGCATTATTAAACGCAACCGGGAATACAACTGTATTTCCATCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGAAGCCGTTGCTGCATTTAGTTTTGCTCCTTTTCCCAAACCAACGTTTATTAAAATAAAAAAAAAACAAACA                                                                                                                                                                                                            >  1:592464/1‑239                                             ACAACGGCAACACAGGCATTATTAAACGCAACCGGGAATACAACTGTATTTCCATCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGTTCCTTCTCCCAAACCAACGTTTTGGAAAATGAAGAAATAACAAGCAAA                                                                                                                                                                                                          >  2:16747/1‑239                                                 CGGCAACCCACGCATTTTTAAACGCAACCGGGAATACAACTGTATTTCCATCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGC                                                                                                                                                                                                      <  1:37241/239‑1                                                        cccGGCCTTTTTTAACCCATCCGGGAATTCAACCTTATTTCCATCCCCCCCAGAGGCTGAGTATGTTGCGGCATTCCACCCACACAGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTATCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTC                                                                                                                                                                                               <  1:395520/236‑1                                                        cCAGGCATTATTAAACGCAACCGGGAATACAACTGTATTTCCATCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTC                                                                                                                                                                                               <  2:693481/238‑1                                                            GCATTATTAAACGCAACCGGGAATACAACTGTATTTCCATCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCGGCATTAGGTTTTCCTCCTTCTCCCAAACCAACGTTTATGAAAATGAACCAAAAACAAACAAATAGCAACATTCac                                                                                                                                                                                             >  1:673985/1‑235                                                                           ACCGGGAATACAACTGTATTTCCATCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGAT                                                                                                                                                                            >  2:228460/1‑239                                                                            CCGGGAATACAACTGTATTTCCATCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAATTGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATT                                                                                                                                                                           >  2:110052/1‑239                                                                                 AATACAACTGTATTTCCATCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAAGGGCATCATTCCTGCTTTTACCAGGGGGATTTAACA                                                                                                                                                                      >  1:32100/1‑239                                                                                  attccACTTTATTTCCGTCCCCCCCAGGGGGAGATGTTTTTGGGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACA                                                                                                                                                                      <  1:707645/233‑1                                                                                  attcaaagtTATTTCCATTCCCCCCAGAGGTCGATGCTTTTGCGGCATGCCCACCCCACTGAATGATTACTGATTGCTCAATGCCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACA                                                                                                                                                                      <  1:177109/229‑1                                                                                  aatcacccgttTTTCCATCCCCCCCCGGGAGTAAGCCTTTTGCGGCCTTCCACCCCCACTGAATGATTACTGATTGCACAATACCACCAATCATAACCGGTATAGCTAAGAAACCGGTGCCTGCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTGCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACA                                                                                                                                                                      <  1:133271/227‑1                                                                                  ATACAAGTGTATTTCCATCCCCCCCAGAGGCAGATGCTTTTGCGGCATGCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACA                                                                                                                                                                      <  2:422627/238‑1                                                                                       ctTGTTTTTCCTTCCCCCCCAGAGGCAGATTCTTTTGCGGCATTCCACCCCCACTGAATGATTACGGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTA                                                                                                                                                                <  1:9676/237‑1                                                                                          GTATTTCCATCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTG                                                                                                                                                             <  2:788100/239‑1                                                                                                  acCCCCCCCAGAGACAGATGCTTTTGCGGCATACCCCCCCCACTGAATTATTACTGGTTGCCCAATTCCACCAATCATATCCGGTATAGCTATGAAACCGGTGCGGCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCGTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTA                                                                                                                                                     <  1:524846/237‑1                                                                                                               GCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGCAGAAATAACAAGCAAATGGCATCATTCATGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACca                                                                                                                                        >  2:531102/1‑237                                                                                                               GCAGATGCTTTTGCGGCAGTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGGGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGATCCTTATCCCAAACCAACGTTTATGAAAATGAGGAAATAACAAGCAAATGGAAACATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGAAAGCGTAACAACAA                                                                                                                                        >  1:427391/1‑239                                                                                                                    TGCTTTTGCGGCATTCCACCCCCACTTAATGGTTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAAT                                                                                                                                      <  2:11113/236‑1                                                                                                                        TTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGAC                                                                                                                                   >  2:38167/1‑235                                                                                                                        TTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGAC                                                                                                                                   <  1:38167/235‑1                                                                                                                         TTGCGGAATTTCACCCCCCATGAATGATTTCTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCTTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTGTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAA                                                                                                                              <  2:286208/239‑1                                                                                                                              GCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCATGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAAAAAAT‑ACCCAAACACAaa                                                                                                                        >  1:424835/1‑237                                                                                                                               ccTTCCCCCCCCCCTGAATGATTTCTTATTGCTCAATACCACCAATCCTAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAG                                                                                                                         <  1:228460/236‑1                                                                                                                                ctctccccccgctttAATGGTTACTGTTTGACAAATAACACCAAACATAACCGGTATATCTATGAAACCGGTGCGTCCTAAGGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCGCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATTATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGAT                                                                                                                       <  1:823164/224‑1                                                                                                                                     ACCCCCACTGAATGATTACTGAATGCTCAATTCCCCCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACA                                                                                                                  <  2:524236/239‑1                                                                                                                                          CACTGAATGAGTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTA                                                                                                             <  2:312716/239‑1                                                                                                                                          CACGGAATGATTTCCGATTTCTCAATCCCACCAATCATAACCGGTATAGCTATGAACCCGGTGCGTTCTAATTGAGCCGGTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTA                                                                                                             <  1:531102/239‑1                                                                                                                                           ACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACCCAGATCTAAAACGTAA                                                                                                            >  2:15573/1‑239                                                                                                                                           ACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCA                                                                                                                                                                                                            <  1:297630/143‑1                                                                                                                                           ACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCA                                                                                                                                                                                                            >  2:297630/1‑143                                                                                                                                            CTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCCACGTTTATGAAAATGACGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCCGGGGGATTTAAAATGCTTATTGGCTATTTCCGCGTATCAAACAAAGACAAGAAAACAAAACTAAAACGGAAT                                                                                                           >  1:860721/1‑239                                                                                                                                                    atgtgtataagagccagCCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGGAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAA                                                                                                   <  2:319667/222‑1                                                                                                                                                     TACTGATTGCTCAATTCCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAAC                                                                                                  <  2:592464/239‑1                                                                                                                                                       CTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAAAACAGATCTACAACGTAATGCGCTGA                                                                                                    >  2:886040/1‑235                                                                                                                                                             GCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGCGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCTTCATTCCTGCTTTTATCAGGGGGATTTAACATGCTTATTGGCTATGTACCCGTATCAACAAATGACCAGAACACAGACCTAAACCGAAATGCGCTGAATTCTGCAGG                                                                                          >  2:680992/1‑239                                                                                                                                                                             CATAACCGGTATAGCTATGAAACCGGGTCGTCCTAATGTAGCCTTTGCTGCCTTGATTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTT                                                                          <  2:862353/239‑1                                                                                                                                                                              ATAACCGGTTTAGCTATGAATCCGGGTCATCCAAATGTAGGCGTTGCTGCATTGAGTTTTTCTCCTTCTCCCAAACCAACGGTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACACATGACGAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTG                                                                         <  1:680992/239‑1                                                                                                                                                                                AACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCGAACCAACGTGTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACCCGTATCAACAAATGACCAGAACACAGATCTACAACGTACAGCGCTGAACTGTGaaagaactgccacttaaaaaaa                                                                        >  1:319667/1‑216                                                                                                                                                                                      TATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGAACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACGTTGCGGGATTGGAGCTGATTTTTGAGGACAAG                                                                 >  2:297483/1‑239                                                                                                                                                                                        TAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCG                                                                                                        >  2:387137/1‑198                                                                                                                                                                                        TAGCTATGAAACCGGTGCGTCCAAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCG                                                                                                        <  1:387137/198‑1                                                                                                                                                                                                  ACCGGTGCGTCTTAATGTAGCCGTTTCTGAATTGAGTTTTGCCCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACA                                                     <  1:16747/239‑1                                                                                                                                                                                                       TGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTT                                                                          <  2:477113/213‑1                                                                                                                                                                                                       TGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACA                                                                                                                            >  1:604217/1‑163                                                                                                                                                                                                       TGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACA                                                                                                                            <  2:604217/163‑1                                                                                                                                                                                                           TCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATG                                                                                                                                                                    <  1:143973/119‑1                                                                                                                                                                                                           TCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATG                                                                                                                                                                    >  2:143973/1‑119                                                                                                                                                                                                                 TGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCACCAAATGACCAGAACACAAATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGGGCTGGTTTTTGAAGAAAAAATctgtctctttaacacatctgac                                         >  1:477113/1‑214                                                                                                                                                                                                                     GCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCT                                                                                 >  2:217931/1‑192                                                                                                                                                                                                                     GCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCT                                                                                 <  1:217931/192‑1                                                                                                                                                                                                                      CCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGACCTGTGCAGGATGCGAGCTGATTTTTGAAGTCAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGCCT                                 >  2:259558/1‑239                                                                                                                                                                                                                      CCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTCTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACT                                 >  2:295004/1‑239                                                                                                                                                                                                                      CCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATG                                                                                                                                                                                                                           >  2:370327/1‑53                                                                                                                                                                                                                      CCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATG                                                                                                                                                                                                                           <  1:370327/53‑1                                                                                                                                                                                                                          TGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAA                             >  2:358328/1‑239                                                                                                                                                                                                                             TGCATTGGGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGGTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAA                          <  1:110052/239‑1                                                                                                                                                                                                                              GCATTGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAA                          <  2:172668/238‑1                                                                                                                                                                                                                                  tggtTTTGGCTCCTTCCCCCAACCCAACGCTTATGAAAAGGAATAAATAACAAGCAAATGGCATCCTTCCTGATTTTACGAGGGAGACTTAACATGCTTATTGGCTATGTACGCGTATCAACGAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGATGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCT                     <  1:808967/235‑1                                                                                                                                                                                                                                  TGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCT                     <  2:673985/239‑1                                                                                                                                                                                                                                  TGAGTTTTGCTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCT                     <  1:15573/239‑1                                                                                                                                                                                                                                           CTCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGACCAAAGTCCGAAAGGCCGGGACTGAAAAACCTGCTCCGGCCATT            >  2:609201/1‑239                                                                                                                                                                                                                                              CTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGGGCAGGATGCGAGCTGATTTTTGCAGACAAGCAAACGGGACCAAAGACCGAAAGGCCGGGCCTGAAAAAACggtcagggacataatc         >  2:80589/1‑223                                                                                                                                                                                                                                                     CAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTAAAGACAAGATAAGCGGCAAAAAGTCCGAAAGGCCGGGCCGGAAAAAACTCCCCAGGAAATaacaggaaggg  >  1:275443/1‑228                                                                                                                                                                                                                                                     CAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGAGTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCTCAGGACATTATCGGCAGGT  <  1:295004/239‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TTGCCACTGCATTGATAGGTGCGCTGACATTGTCATAATTTGCAACAACGGCAACACAGGCATTATTAAACGCAACCGGGAATACAACTGTATTTCCATCCCCCCCAGAGGCAGATGCTTTTGCGGCATTCCACCCCCACTGAATGATTACTGATTGCTCAATACCACCAATCATAACCGGTATAGCTATGAAACCGGTGCGTCCTAATGTAGCCGTTGCTGCATTGAGTTTTGCTCCTTCTCCCAAACCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1208041‑1207790 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccttctcccaaaccaaCGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCTCAGGACATTATCGGCAGGT  >  NC_000913/1209619‑1209849

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.