New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1207805	10 (0.130)	50 (0.710)	40/406	NT	79.2%	coding (305/630 nt)	stfP	e14 prophage, uncharacterized protein
	?	NC_000913	= 1209602	17 (0.240)					pseudogene (18/501 nt)	stfE	pseudogene, e14 prophage, side tail fiber protein fragment family,Phage or Prophage Related

GATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCTCAGGACATTA  >  NC_000913/1209367‑1209840                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                               gATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGcct                                                                                                                                                                                                                                             <  2:646514‑M2/239‑4 (MQ=255)   tccctcgttgcATCCCCCCTAATACCTAAAATAGAGCCACCTGTACCAATCCCCCCCCCGTCAACCCAGCCACGAATAAACTCACCCCGTAAATCAGGCAAGTTATTTGGCGGATAAGCCTTTGCCAGTTCCGGGTATTCTGCAGCAGAAAAAGCGGCCCCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGcctt                                                                                                                                                                                                                                            >  1:833247‑M2/6‑234 (MQ=255)        cGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCACTTCCGGGAATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCGGCTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGCAATTCAGAGccttccccca                                                                                                                                                                                                                                      <  1:675441‑M2/239‑11 (MQ=255)                    cTGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTa                                                                                                                                                                                                                          >  2:263460/1‑239 (MQ=255)                       aaTACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGa                                                                                                                                                                                                                       >  2:326001/1‑239 (MQ=255)                        ttcgtaaaaaatgaacGACCTATATCATCCCCCCTCCCGTACTCCCCGCCACGAATAAAATCAACGAGGAAAACAGGCAATTTATGTGTCAGATACGCCTGTACCAGTT‑CGGGTGTTCTTCAGAAGAAAAAGCGGCACCATTGCCTTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCTCCGGAAACGGGACGACCACAGGTAATGCATAGCTTTCTCCCAAACCAAGGttttcgaga                                                                                                                                                                                                                     <  1:433898/224‑7 (MQ=255)                         tACTTAAAATAGGGCGACCTGTACCAATCCCCCGCCCGTCACCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgaga                                                                                                                                                                                                                     >  1:34275‑M2/1‑212 (MQ=255)                            ttAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagcc                                                                                                                                                                                                                  <  2:548844‑M2/239‑31 (MQ=255)                            ttAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaagggtttcgagagcc                                                                                                                                                                                                                  <  2:887137‑M2/239‑31 (MQ=255)                              aaaaTAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgt                                                                                                                                                                                                                >  2:458593‑M2/1‑207 (MQ=255)                                   cacggcccctgttaccactccccccccctccccccgaccaagaataAACTCCCCACGGAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgca                                                                                                                                                                                                           >  1:121862‑M2/20‑202 (MQ=255)                                   agagcccccgttatcaatcccccCCCCCTCAACCCAGCCACGAATAAACCCACCACGTAAATCAGGAAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgca                                                                                                                                                                                                           >  1:896583‑M2/12‑202 (MQ=255)                                      gCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagacccgttttcacag                                                                                                                                                                                                        <  2:508991‑M2/239‑41 (MQ=255)                                         aCCTGTATCAATCACCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCTCCATTGAATTTCCGCCAGACTGTTGGCGGAGGGGTGGAAGGCCCCGGAACGGGGAACACAAAAGGGAAAGCGAAGCCTACCCCCAAACCAAGGttttccaaagcagtttgagcagac                                                                                                                                                                                                      >  1:458593/1‑217 (MQ=255)                                          ccTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGCGTGGCTGACGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtgtgccaagagcc                                                                                                                                                                                                    <  1:640545‑M2/239‑45 (MQ=255)                                              tATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACCCCAACAGGTAATGCAAAGccttctcccaaaccaaggttttggagagcagttggcacagtgccatcc                                                                                                                                                                                                <  1:26717‑M2/239‑49 (MQ=255)                                                   aTCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCATTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGTCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGACAAGccttctcccaaacccaggttttccagacccctttgcccattgccctcccattt                                                                                                                                                                                           <  1:512331‑M2/239‑54 (MQ=255)                                                        ccgcccgTCATCCCAGCCACGAATAAACTCCCCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTGGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTc                                                                                                                                                                                      <  2:675441/239‑1 (MQ=255)                                                        ccgcccgTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgata                                                                                                                                                                                       <  2:510138‑M2/238‑58 (MQ=255)                                                        ccgcccgTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccatttgcacagtgccatccgatttgata                                                                                                                                                                                       <  2:724670‑M2/238‑58 (MQ=255)                                                        ccgcccgTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCGGAAGGCCACGGAACCGGGACACCAAAGGGTAATGCACAGcctcgtcccaaaacaaagttttcgagaaccggtggcaccatgccatcccgtttgaac                                                                                                                                                                                       <  1:479606‑M2/238‑58 (MQ=255)                                                        ccccccgTCCTCCCAGCCACGAAAAAACTCACCCCGTAAATCAGGCAATTTATTTTGCGGAAAAGCCTTTGCCAGGTCCGGGTATTCTTCAGCAGAAAAAGCGGCCCCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTc                                                                                                                                                                                      <  1:554423/236‑1 (MQ=255)                                                           cccgTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCCCGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaagggtttcggggaccgtttgcacagtgccatccgatttgatatcgc                                                                                                                                                                                   <  1:138079‑M2/239‑62 (MQ=255)                                                              gTCCTCCAAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTAGTTGGCGGATAATTCTTTGCCATTTCCAGGTACTCTTCAGCAGAAAAAGCGTCACCATTGCATTTCAGCCAGCCTTTTGGCGGAGTGGCTGAATGCCACGGAACCGGGACACCAACAGGTAATGCAGATgcttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaa                                                                                                                                                                                >  2:121323‑M2/1‑175 (MQ=255)                                                               tCATGCCAGCCACGAATAAACCCACCACGTAAATCAGTCAATTTAATTGTCGGATAAGCCTTTGCCAGGTCCGGGTATTCGTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaa                                                                                                                                                                               >  2:350342‑M2/1‑174 (MQ=255)                                                               tCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACCCCAACAGGTAATGCAGAGgcttctcccaaaccaaggttttcaaaagccgtttgaacaaggccacccgcattgatatccccaaa                                                                                                                                                                               <  1:350342‑M2/239‑66 (MQ=255)                                                                         cACGAATTAAATCACCACGTAAATCATGCAATTTATTGGGCGGATAAGCCTTTGCCAGTGCCGGGTTTTCTTCAGCAGAAAAAGCGGCTCCATTGCATTTCAGCCAGCCTGTTGGCGGGGTTGCTGAAGGCCACGGAACCGGGACGCCAACAGGTAATGCAGAGccttctcccaaaccaaggtgttcgagagccgtttgcacaatgccatccgatttgatatcgccaaacggattcttg                                                                                                                                                                     >  2:252683‑M2/1‑164 (MQ=255)                                                                             aaTAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACCGGTAATGCATAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCAACATTCCTCCTTTTCCCAGGGGGAttt                                                                                                                                                                 >  1:453643/1‑239 (MQ=255)                                                                                           gTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTgg                                                                                                                                                   <  2:847937/239‑1 (MQ=255)                                                                                             aaaTCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcg                                                                                                                                                 <  2:884313‑M2/239‑96 (MQ=255)                                                                                                    gtaattTTTTTTTCGGTAAAGCCTTTGCCAGTTCCGGGTATTTTTCAGCAGAAAAGGCGGCTCCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgacatccgatttgatatcgccaaacggattattgcggcttaacagcagcgcgcgaagtgcg                                                                                                                                          >  1:560594‑M2/3‑137 (MQ=255)                                                                                                      aaTTTTTTTGTCGGATAATCCTTTGCCCGTTCCGTGTATTCTGCAGCAGAAAAAGCGGCCCCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggt                                                                                                                                        >  1:562277‑M2/1‑135 (MQ=255)                                                                                                      aaTTTATTGGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGGTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggt                                                                                                                                        >  2:138079‑M2/1‑135 (MQ=255)                                                                                                              tGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtccggtaagta                                                                                                                                   <  2:720932‑M2/236‑110 (MQ=255)                                                                                                                tCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcaacgtgccatccgatttgatatcgccaaacggattctttcggcttaaaaacagcgagcggagtagtgcaagaaaatgg                                                                                                                              <  1:880663‑M2/239‑115 (MQ=255)                                                                                                                   gATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccttttgcccagtgccatccgaattattatcgccaaacgagttcttccggcttaacaacagccggcgaatgccggtaagcaactggtcg                                                                                                                           <  2:291317‑M2/239‑118 (MQ=255)                                                                                                                     tAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATGTCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGAc                                                                                                                          <  2:661446/238‑1 (MQ=255)                                                                                                                           tttGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAGAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAaca                                                                                                                   <  2:764550/239‑1 (MQ=255)                                                                                                                           ctttccggTTCCGGGTTTTTTTCTGCAGAAAAAGCGGCACCATTTCATTTCAGGCATGCTGTTGGGGGAGTGGGTTAAGGCCACGGAACCTGTACCCCAACAGTTAATTCAGAGCCTGCTGCCAAACCAACGTTTATTAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTGACCAGGGGGATTTAACATGCTTATTTGCTATGTACGCGTATCAACAAATGACCAGAaca                                                                                                                   <  1:230564/232‑1 (MQ=255)                                                                                                                             tGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgcccct                                                                                                                 <  2:112411‑M2/239‑128 (MQ=255)                                                                                                                             tGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAGAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGCATAAAAAAATGAcacaaaaaaa                                                                                                                 >  1:764550/1‑230 (MQ=255)                                                                                                                              tccAGTTCCGGGTTTTCTTCAGCAGAAAAAGGGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTTCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAg                                                                                                                <  1:326001/238‑1 (MQ=255)                                                                                                                                 ctttccGGGTTTTTTTCAGCAAAAAAAGGGGCCACCTTGCATTTCAGCCAGGCTTGTGGGGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctc                                                                                                             >  1:884313‑M2/3‑108 (MQ=255)                                                                                                                                   ttacGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAAAGAAGAAATAACAAGCCAATGGCATCATCACTGCTTTTACCAGGGGGATTTAAAAAGCTTTATGGCTATGGTCGCGCACCAAAAAAACACCAAAacaaaaaacaa                                                                                                           >  1:530951/4‑231 (MQ=255)                                                                                                                                    tCCGGGTATTTTTCAGCGAAAAAGGCGGCCCCAGTGCATTCCAGCCAGCCTGGTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGGGccttctcccaaaccaagggtttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctc                                                                                                             >  1:54971‑M2/1‑105 (MQ=255)                                                                                                                                           aTTCTTCAGAAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGGTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTa                                                                                                    <  2:453643/238‑1 (MQ=255)                                                                                                                                             tcttcAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaagggtttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattctttcggcttaacagcagcgcgcgcagagcgggaagtaactggtcgcgccgccccttccccaggctggcacc                                                                                                 <  1:600601‑M2/239‑144 (MQ=255)                                                                                                                                               ttcAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccgg                                                                                               >  2:640545‑M2/1‑94 (MQ=255)                                                                                                                                                 cagcagAAAAAGCGGCCCCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggat                                                                                             >  2:26717‑M2/1‑92 (MQ=255)                                                                                                                                                      gAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGTTCTACAACGTAATGCGCTGa                                                                                           >  2:729840/1‑236 (MQ=255)                                                                                                                                                       aaaaaGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctcc                                                                                       <  2:620563‑M2/239‑154 (MQ=255)                                                                                                                                                       aaaaaGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagaacctggtggtgccgccccttctccaggctggccccggagcccccc                                                                                       <  1:546358‑M2/239‑154 (MQ=255)                                                                                                                                                           aGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctccaaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccacca                                                                                   >  2:644402‑M2/1‑82 (MQ=255)                                                                                                                                                           aGCGGCACCATTGCATCTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACAACAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccacca                                                                                   >  2:183387‑M2/1‑82 (MQ=255)                                                                                                                                                              ggCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGGTTCAACAAATGACCAGAACACAGATCTAAAACGTAATGCGCGGAACTGGGAAGGa                                                                                >  1:677637/1‑239 (MQ=255)                                                                                                                                                                    tttccctttCAGCCCCCCTTTTGGGGGGGTGGCTGAAAGCCACGGAACCGGGACACCAACAGGTAATGCAAAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAg                                                                          <  1:263460/233‑1 (MQ=255)                                                                                                                                                                     ttGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcacccgatgcctcccccacgctgccaag                                                                         <  2:337346‑M2/239‑168 (MQ=255)                                                                                                                                                                                 ccccctttTGGGGGAGTGGCTGAAGGCCCCGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgcaa                                                             >  1:887137‑M2/4‑60 (MQ=255)                                                                                                                                                                                             ggAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgcaacatgtcaaagt                                                  >  2:877258‑M2/1‑48 (MQ=255)                                                                                                                                                                                              gAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctccaaagttcctcctgcaacatgtcaaagta                                                 <  2:412023‑M2/238‑192 (MQ=255)                                                                                                                                                                                                 tGGCTGAAGGCCCGGGAACCGGGACACCAACAGGTAAGGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagggccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgcaacatgtcaaagtagtc                                              >  1:512994‑M2/1‑44 (MQ=255)                                                                                                                                                                                                 gtgctTAAGCCCCGGGAACCGGGACCCCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagggccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgcaacatgtcaaagtagtc                                              >  1:548844‑M2/3‑44 (MQ=255)                                                                                                                                                                                                  ggCTGAAAGCCACGGAACCGGGCCACCAACAGGTAATGCCGGGccttttcccaaaccaaggttttcgagggccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgacccttctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgcaacatgtcaaagtagtca                                             >  1:510138‑M2/1‑43 (MQ=255)                                                                                                                                                                                                    cggaaAGGCAAGGAACCCGGGCCCAAAAAGGTAATGCAAGGccttcccccaaaccaaggttttcgagagccggttgcacagtgccatccgatgtgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgcaacatgtcaaagtagtcatc                                           >  1:371986‑M2/3‑41 (MQ=255)                                                                                                                                                                                                             aCGGAACCGGGACACCAACAGGAAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGCAGAAATAACAAGCAAATGGCATCCTTCCTGCTTTTACCAGGGGGATTTAACATGATTATTGGCTATGTACGCGTATCCACAAATGACCAGAACACAGTTCTACGACGTAATGCGCTGCACTGTACAGGAAGCGACCTGAATTTTGAAGACAAAATAAACAGCAAAAATCCCGAAAg                                 >  1:130367/1‑239 (MQ=255)                                                                                                                                                                                                              cGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgcccc                                                                                                                  <  2:255487‑M2/157‑127 (MQ=255)                                                                                                                                                                                                              cGGAACCGGGACACCAACAGGTAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgcccc                                                                                                                  >  1:255487‑M2/1‑31 (MQ=255)                                                                                                                                                                                                                                  ggaatgCAGGGccttcacccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgcaacatgtcaaagtagtcatcatccagatcggtggcaggcgtgc                    >  2:241870‑M2/3‑11 (MQ=255)                                                                                                                                                                                                                                   tAATGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgcaacatgtcaaagtagtcatcatccagatcggtggcaggcgtgccggtct              >  2:679379‑M2/1‑10 (MQ=255)                                                                                                                                                                                                                                      tGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggccccggatgcctccaccacgctgcaaagttcctcctgcaacatgtcaaagtagtcaccatccagatcgggggcaggcgcgccgggcggggggg        <  1:679379‑M2/239‑233 (MQ=255)                                                                                                                                                                                                                                      tGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgcc                                                                                                                       <  2:642046‑M2/128‑122 (MQ=255)                                                                                                                                                                                                                                      tGCAGAGccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgcc                                                                                                                       >  1:642046‑M2/1‑7 (MQ=255)                                                                                                                                                                                                                                          gagccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgcaccatgtcaaagtagtcatcatccagatcgggggcaggcgtgccggccgggggggtacc    <  1:206976‑M2/239‑237 (MQ=255)                                                                                                                                                                                                                                           agccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgcaccatgtcaaagtagtcatcatccagatcggtggcaggcgtgccggtctgggggttacca   <  2:205005‑M2/239‑238 (MQ=255)                                                                                                                                                                                                                                            gccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggttgtgccgccccttctccaggctggcaccggatgcctccaccaccctgcaaagttcctcctgcaacatgtccaagtagtcaccctccaaatccgtggcgggccgtccggtctggggggtcacac  <  1:395453‑M2/239‑239 (MQ=255)                                                                                                                                                                                                                                            gccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccccgctgcaaagttcctcctgccacatgtcaaagtagtcatcatccagatcgggggcaggggtgccggtctgggggcggtc    <  1:241870‑M2/237‑237 (MQ=255)                                                                                                                                                                                                                                            gccttctcccaaaccaaggttttcgagagccgtttgcacagtgccatccgatttgatatcgccaaacggattcttgcggcttaacagcagcgcgcgaagtgcggtaagtaactggtcgtgccgccccttctccaggctggcaccggatgcctccaccacgctgcaaagttcctcctgcaacatgtcaaagaagtcatcatccagatcgtgggaagcggtgccggtctgggggttaccac  <  1:822287‑M2/239‑239 (MQ=255)                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                               GATCCTCCGTTGCATACCCCTGAATACTTAAAATAGAGCGACCTGTATCAATCCCCCGCCCGTCATCCCAGCCACGAATAAACTCACCACGTAAATCAGGCAATTTATTTGTCGGATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGAGCTGATTTTTGAAGACAAGATAAGCGGCACAAAGTCCGAAAGGCCGGGACTGAAAAAACTGCTCAGGACATTA  >  NC_000913/1209367‑1209840

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.