Predicted mutation
evidence seq id position mutation freq annotation gene description
JC NC_000913 4,001,644 Δ5 bp 100% coding (220‑224/951 nt) corA → magnesium/nickel/cobalt transporter

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 40016432 (0.030)80 (1.050) 58/438 NT 97.6% coding (219/951 nt) corA magnesium/nickel/cobalt transporter
?NC_000913 4001649 = 2 (0.030)coding (225/951 nt) corA magnesium/nickel/cobalt transporter

GGGAGTCCCGGTCATGCTGAGCGCATTTCAACTGGAAAATAACCGACTGACCCGGCTGGAAGTCGAAGAGTCACAACCCCTTGTAAATGCAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCGATGGTAGACGGTAACGCCTACGAGTTGCTGCTGGATCTGTTCGAAACCAAAATCGAACAGTTGGCAGATGAAATTGAAAATATCTATAGCG  >  NC_000913/4001412‑4001884
                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                           
tcattgggggtcccggtcatgctggacgaatttcaaccggaaaattaccgtctgacccggttggaagtcgaatagtcacaaccccttgtaaatgcagtatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatct                                                                                                                                                                                                                                            <  1:772217‑M2/2‑1 (MQ=255)
  aatgggagtcccggtaatggtgagcgcatttcaacgggaaaataaccggctggcccggctggaagtagaagagtcacaaccccttggaaatgcagtatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatct                                                                                                                                                                                                                                            <  2:843934‑M2/2‑1 (MQ=255)
        agtgccggtaatcgtgaggcaatttcaactggcaaaaaaccgactgacccggctggaagtcgaagaggccaccccccttggaaatgcggtttggatggatcttgtcgaaccggaccacgacgagcgactgcgggtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacggcggcctgcatCTCcttctt                                                                                                                                                                                                                                     <  1:607818‑M2/9‑1 (MQ=255)
           cccggtcatgctgagcgcatttcaactggaaaataaccgactgacccggctggaagtcgaagagtcacaaccccttgtaaatgcagtatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccgggactggaagacatcgaagcatcggcacgtttctttgacgacgacgacggcctgcatATCcttcttct                                                                                                                                                                                                                                   >  2:390633‑M2/227‑237 (MQ=255)
           cccggtcatgctgagcgcatttcaactggaaaataaccgactgacccggctggaagtcgaagagtcacaaccccttgtaaatgcagtatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgccgacggcctgcacCTCcttcttct                                                                                                                                                                                                                                   >  2:674237‑M2/227‑237 (MQ=255)
                  ctgccgggcccatttcaacttgaaaatgacccactggcccggctggaagtcgaagggtcccaaccccttgtaaatgccgtatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAg                                                                                                                                                                                                                          <  1:587718‑M2/20‑1 (MQ=255)
                  atgctggggcgatttcaactggaaaataaccgactgaaccggctggaagtctaagggtcacaaccccttgtaaatgcagtatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAg                                                                                                                                                                                                                          <  1:763863‑M2/20‑1 (MQ=255)
                    gctgagcgcatttcaactggaaaataaccgactgacccggctggaagtcgaagagtcacaaccccttgtaaatgcagtatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcctCTCCTCCTTCTTCTTTGAAGAt                                                                                                                                                                                                                        >  2:47640‑M2/218‑239 (MQ=255)
                         gcgcatttcaactggaaaataaccgactgacccggctggaagtcgaagagtcacaaccccttgtaaatgcagtatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGa                                                                                                                                                                                                                   >  2:571956‑M2/213‑239 (MQ=255)
                          cgcatttcaactggaaaataaccgactgacccggctggaagtcgaagagtcacaaccccttgtaaatgcagtatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagccttgcaacccgcccggaccgggaagacatcgaagcatcggcacgtttctttgacaacgacgaccgcctccacCtcccccctcttctttacaatgggcgaa                                                                                                                                                                                                                  >  1:841566‑M2/212‑227 (MQ=255)
                            catttcaactggaaaataaccgactgacccggctggaagtcgaagagtcacaaccccttgtaaatgcagtatggattgctcttgtcgaaccggacgacgacgagcgcctgcgcgtacaatatgaacttggccacagcctggcaacccgcacggaactggaagacatcgaagcctcggcacgtttctttgaagaggacgacggcctgcttTCCCTTCTTCTTCTTTTAAGGTGTGTAAGa                                                                                                                                                                                                                >  1:834585‑M2/210‑239 (MQ=255)
                                 caactggaaaataaccgactgacccggctggaagtcgaagagtcacaaccccttgtaaatgcagtatggattgatcttggcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACg                                                                                                                                                                                                           <  2:222974‑M2/35‑1 (MQ=255)
                                   actggaaaataaccgactgacccggctggaagtcgaagagtcacaaccccttgtaaatgcagtatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGcc                                                                                                                                                                                                         <  2:809156‑M2/37‑1 (MQ=255)
                                      ggaaaataaccgacttacccggctggaagtcgaagagtcacaaccccttgtaaatgcagtatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGt                                                                                                                                                                                                      <  2:472054‑M2/40‑1 (MQ=255)
                                      ggaaaataaccgactgacccggctggaagtcgaagagtcacaaccccttgtaaatgcagtatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGt                                                                                                                                                                                                      <  2:489999‑M2/40‑1 (MQ=255)
                                      ggaaaataaccgactgacccggctggaagtcgaagagtcacaaccccttgtaaatgcagtatggattgatcttggcgaaccggacgccgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGt                                                                                                                                                                                                      <  1:212626‑M2/40‑1 (MQ=255)
                                      ggaaaaaaaccgatttgcccgggtggaaggcagagggtcacaaccccttggaaatgcagtatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgtatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGt                                                                                                                                                                                                      <  1:651031‑M2/40‑1 (MQ=255)
                                           ataccccacttgcccggctggaagtggaagagtccaaaccccttgtaaatgcagtatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTc                                                                                                                                                                                                 <  2:810678‑M2/45‑1 (MQ=255)
                                               cccgctgcccccgcgtaaatccgaagcgtcacacccccttgtaaatgcggttgggattggactgttcgaaccggacgacggcgagcgactgcgcgtacaagctgaacttggccagagcctggcaccccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACt                                                                                                                                                                                             <  1:315909‑M2/49‑1 (MQ=255)
                                               cccacttgcccggcgtgaagtgcaagaggcacaaccccttgtaaatgtagtatggattgactttgtcgaaccggacggcgacgagcgactgggcgtacaatctgaacgtgggcagggcctggcaacccgaccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACt                                                                                                                                                                                             <  1:292821‑M2/49‑1 (MQ=255)
                                                 gactgacccggctggaagtcgaagagtcacaaccccttgtaaatgcagtatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATTCGGAAGATCACGCCGGTAACTCCACtgt                                                                                                                                                                                           >  2:784258‑M2/189‑239 (MQ=255)
                                                     gacccggggggaagtcgaaaagtcacaccccgctgtaaatgcagtatggattgatcttgtcgaaccggacgacgacgagcgactgcgagtacaatgtgaactcggccagagcctggcaccccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGc                                                                                                                                                                                        <  2:305581‑M2/54‑1 (MQ=255)
                                                      acccggctggaagtcgaagagtcacaaccccttgtaaatgcagtatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaggacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCAt                                                                                                                                                                                      >  2:87374‑M2/184‑239 (MQ=255)
                                                             tggaagtcgaagagtcacaaccccttgtaaatgcagaatggattgatcttgtcgaaccggacggcgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaaccagcccgggactggaagacatcgaagcttcggcacgcttctttgataccaacgacggcctccttTCCCTTCTCCTTCTTTGCAGATGCGGAAGATCCCGACGGTCAACCCACTGTTGAATTTACCa                                                                                                                                                                                >  1:578237‑M2/177‑238 (MQ=255)
                                                                      aagagtcacaaccccttgtaaatgcagtatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATgg                                                                                                                                                                      >  2:795361‑M2/168‑239 (MQ=255)
                                                                        gtgtcccaatcccttgtaaaggcagtagggattgatcttgtccacccgggcgacgacgagcgactggcggtaaaatctgaacttggccagagcctggcaacccgcccggaacttgaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGgt                                                                                                                                                                     <  1:515967‑M2/73‑1 (MQ=255)
                                                                        gggtcccacccccttgtaaatgcagtttggatttgtcttgtcgaaccggacgacgacgagcgactgcgcgtaaaatctgaacttggcccgagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGgt                                                                                                                                                                     <  1:726490‑M2/73‑1 (MQ=255)
                                                                         agtcccaacccctttgaaatgcagtttggatttgttttgcgtaaccggaccacgacgagcgacttcgcctacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGgtcg                                                                                                                                                                   <  1:210376‑M2/75‑1 (MQ=255)
                                                                          gtcccacccccttgtaaaggcggtttggattgattttgtcgaaccgggcggagaagagcggctgcgcgtaaaatctgaacttggccagagcctggaaacccgcccggaactggaagacatcgaagcagcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGgtcg                                                                                                                                                                   <  1:674237‑M2/75‑1 (MQ=255)
                                                                           tcacaaccccttgtaaatgcagtatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGgtcg                                                                                                                                                                   <  1:571956‑M2/75‑1 (MQ=255)
                                                                                   ccttgtaaatgcagtatggattgatcttgtcgaaccggacgacgacgggcggctgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTAct                                                                                                                                                         <  2:507118‑M2/85‑1 (MQ=255)
                                                                                   ccttgtaaatgcagtagggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcattggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTAct                                                                                                                                                         <  2:144640‑M2/85‑1 (MQ=255)
                                                                                    cttgtaaatgcagtatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTAct                                                                                                                                                         >  2:734230‑M2/154‑238 (MQ=255)
                                                                                     ttgtaaatgcagtatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatcttaacttggccagcgccgggcaacccgcccggaactggaagacatcgaagcttcggcacgtttctttgaagacgaccacggcctgcatCCACATCTTCCTCTTTGAAGATGCGGGAGACCACCCCGGTAACGCAACTGTGGCATTTCCCATCCGGGAGGGGCGTCTGTTTgctcc                                                                                                                                                       >  1:228777‑M2/153‑238 (MQ=255)
                                                                                     ttgtaaatgcagtatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACGTTGTCATTTACCATCCGTGATGGTCGGCTGTTTAc                                                                                                                                                          >  1:182100‑M2/153‑236 (MQ=255)
                                                                                     ttgtaaatgcagtatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGAGGCGGAAGATCACGCCGGTAACCCCACTGTGGCATTTACCATCCGGGAGGGCCGCCTGTTTAc                                                                                                                                                          >  1:177164‑M2/153‑236 (MQ=255)
                                                                                        taaatgcagtatggattgatcttggcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcg                                                                                                                                                    <  2:139397‑M2/90‑1 (MQ=255)
                                                                                        gaaaatcaggttggagtggttttgtccgaacggacgcccacgggcgcctgggctacaaacctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcttcggcacgtttctttgaagacgacgacggcctgcatCCCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcg                                                                                                                                                    <  1:54540‑M2/90‑1 (MQ=255)
                                                                                               agtatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGTTCACGCCGGGAACTCACCTGTGGCATTTACCATCCGTGATGGGCGCCTGTTTACTCtgcgtgagcga                                                                                                                                             >  1:379336‑M2/143‑238 (MQ=255)
                                                                                                gtatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtgggcgtg                                                                                                                                            >  2:702490‑M2/142‑239 (MQ=255)
                                                                                                 tatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCCCGCCGGTAACTCCACTGTGGCATTTACCATCCGTGGTGGTCGTCTGTTTACTCTgctttagcgtga                                                                                                                                           >  2:197727‑M2/141‑239 (MQ=255)
                                                                                                          atcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACGGTGGCATTTACCATCCGTGATGGTCGTCCGTTTACTCTGCGGGAGGGTGAACGGGCCGc                                                                                                                                  >  1:610180‑M2/132‑239 (MQ=255)
                                                                                                           tcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGGGAACGGCCCCCt                                                                                                                                 >  1:850216‑M2/131‑239 (MQ=255)
                                                                                                              tttcgaaccggccgacgccgggcgactgcgcggaaaatctgaacttggccggggcctgtgaacccgcccggaactggaagacatcgaagcatcggcacgtttcttggaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCtttt                                                                                                                              <  1:23605‑M2/112‑1 (MQ=255)
                                                                                                               gtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTc                                                                                                                             >  2:201208‑M2/127‑239 (MQ=255)
                                                                                                               gtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGGGCTGGTCGTCTGTTTATCCGGCGGTAGGGGGACTTGCCCGcttttg                                                                                                                             >  1:413004‑M2/127‑238 (MQ=255)
                                                                                                                 cgaaccggacgtggcccggcgactgcgcgtaaaatctgaacttggccagggcctggccacccgcccggaactggaagacaccgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGt                                                                                                                           <  1:608916‑M2/115‑1 (MQ=255)
                                                                                                                    accggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCt                                                                                                                         <  2:67698‑M2/117‑1 (MQ=255)
                                                                                                                    accggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACGGCCCGCTCTTCGTctt                                                                                                                        >  2:178497‑M2/122‑238 (MQ=255)
                                                                                                                    accggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGGGATGGTCGTCTGTTTACTCTGCGTGGGCGTGAACTGCCCGCTTTTCg                                                                                                                            >  2:194151‑M2/122‑235 (MQ=255)
                                                                                                                     ccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGACCTGCCCGCTTTCGTctgat                                                                                                                      >  1:413824‑M2/121‑237 (MQ=255)
                                                                                                                     ccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGt                                                                                                                       >  2:569291‑M2/121‑239 (MQ=255)
                                                                                                                          cgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGt                                                                                                                  >  1:687189‑M2/116‑239 (MQ=255)
                                                                                                                          acgcggcgtgggggttaaaaTCGGAACTGGGCCCGGGGCTGGCAACCCGGCCGGAAGTGGAAGACCGCGAAGCATCGGATCGTTGCTTTGAAGACGACGACGGCTGGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGAGGCGGAAGATCACGCCGGTAACTCCGCTGTGGCATTTACCATCCGTGTTGGTCGTCTGTTTACTCTGCGGGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCg                                                                                                             <  1:569291/221‑1 (MQ=255)
                                                                                                                               gcgggccactgcgcgctaaatcttaacttggccagaccctggcaccccgcccggaactggaagacaccgaagcatcggcacgtttctttgaagacgacgacggcctgcatCCCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCg                                                                                                             <  1:859446‑M2/129‑1 (MQ=255)
                                                                                                                               cctagcggctgcgcgtacaatctgaactgggccagggcctggcaacccgcccggaactggaagacatcgaaggctcggcccttttctttgaagacgccgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCg                                                                                                             <  1:785855‑M2/129‑1 (MQ=255)
                                                                                                                                     gactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGccc                                                                                                        <  2:177164‑M2/134‑1 (MQ=255)
                                                                                                                                       ctgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGCCTGTTTACTCTGCGTGAGCGGGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTa                                                                                                     >  1:593517‑M2/103‑239 (MQ=255)
                                                                                                                                             gttaaatcttaactgggcaagagcctggcaacccgcccggaagtggaagacatcgaagcatcggcacttttctttgaagacgccgccggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCTCTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGt                                                                                               <  1:739805‑M2/143‑1 (MQ=255)
                                                                                                                                                caatctgaacttggccagcgcctggcaccccgcccggaactggaagccatcgaagcatcggcacgtttcttggaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCGa                                                                                            <  2:184526‑M2/146‑1 (MQ=255)
                                                                                                                                                         cttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGACGGTATCGTATGCGTGCCCGTAGCCAGTCGTTGGTAGACg                                                                                   >  2:863202‑M2/85‑239 (MQ=255)
                                                                                                                                                            ggccagggcctggctacccgcccgcaactggaagacatcgacgcatcggcacgtttctttgaaggcgacgacggcctgcatCTCCTTTTTCTTCTTTGAAGATGGGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCCTCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCGATGGTAGACGGTa                                                                                <  1:47640‑M2/158‑1 (MQ=255)
                                                                                                                                                            ggccagggcctggcaacccgcccggaactggaaggcatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCGATGGTAGACGGTa                                                                                <  2:795397‑M2/158‑1 (MQ=255)
                                                                                                                                                            ggccagagcctggcaacccgcccggaactggaaggcatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCGATGGTAGACGGTaa                                                                               <  2:413824‑M2/158‑1 (MQ=255)
                                                                                                                                                            ggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCGATGGTAGACGGTa                                                                                >  2:782880‑M2/82‑239 (MQ=255)
                                                                                                                                                             gccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCGATGGTAGCCGGTa                                                                                >  2:37267‑M2/81‑238 (MQ=255)
                                                                                                                                                             gccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCGATGGTAGACGGTa                                                                                >  2:271405‑M2/81‑238 (MQ=255)
                                                                                                                                                                 gagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCGATGGTAGACGGTAACGcc                                                                           >  2:43097‑M2/77‑239 (MQ=255)
                                                                                                                                                                   gcctggcaacccgcccggaacgggaagacatcgaagcagcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCGATGGTAGACGGTAACGc                                                                            <  2:379336‑M2/162‑1 (MQ=255)
                                                                                                                                                                       cccgcccgGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCAT‑‑‑‑‑CTCCTTCTTCTTCTTTGAAGATGCGGAAGATCAAGCCGGTACCTACACTGCGGCATGTACCATCTGTGATGGCCGTCTGTTTACTCTGGGTGTACGTGAACTGCCCGCTTTTCGCCTGCATCGATTGGTGGCCCGTACCCATCCGATGGTAGACGCAAAAGCCTAAGAGtt                                                                   >  1:156177/1‑236 (MQ=255)
                                                                                                                                                                          aacccgcccggaactggaagacatcgaagcatcggcccgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCGATGGTAGACGGTAACGCCTACGAGtt                                                                   <  2:244563‑M2/171‑1 (MQ=255)
                                                                                                                                                                           acccgcccggaactggaagacaccgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCGATGGTAGACGGTAACGCCTACGAGTtg                                                                  <  2:299653‑M2/172‑1 (MQ=255)
                                                                                                                                                                              cgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATGGTATGCGGGCCCGTAGCCAGTCGATGGGAAAGGGTAACGCCTACGAGTtgcggc                                                              >  1:137029‑M2/64‑239 (MQ=255)
                                                                                                                                                                                cccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCCGTCGATGGTAGACGGTAACGCCTACGAGTTGctgctg                                                            >  2:419297‑M2/62‑239 (MQ=255)
                                                                                                                                                                                          gaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGAATCGTATTCGTGCCCGTAGCCAGTCGATGGTAGACGGTAACGCCTACGAGTTGCTGCTGGATCTGTTCg                                                  >  2:755692‑M2/52‑239 (MQ=255)
                                                                                                                                                                                               catcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTTCCCGCTTTTCGTCTGTATCGTATGCGTCCCCGTAGCCAGTCGCAGGAAGACGGTAACGCCTCCGGGTGGGTTCTTGATCTGTGCGAAaca                                             >  1:356734‑M2/47‑238 (MQ=255)
                                                                                                                                                                                               catcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCAGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCGATGGAGGACGGTAACGCCAACGGGTTGCGGCGGGACCTGTTGGAAAcc                                             >  1:327346‑M2/47‑239 (MQ=255)
                                                                                                                                                                                                cttgaaccatcggccagtttttttgaagacgaagacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCGATGGTAGACGGTAACGCCTACGAGTTGCTGCTGGATCTGTTCGAAACCa                                            <  2:435447‑M2/194‑1 (MQ=255)
                                                                                                                                                                                                    aagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTCCCCGTAGCCAGTCGCTGGTGGCCGGTAACGCCTACGGGTTGCTCCGGGGTCTGTTCGAAACCcaaa                                         >  1:356155‑M2/42‑238 (MQ=255)
                                                                                                                                                                                                                 ttgctttgaagacgacggcggcctgcatCTCCTTCTTCTTCTTTAGAGGTGCGGAAGAGCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCGATGGTAGACGGTAACGCCTACGAGTTGCTGCTGGATCTGTTCGAAACCAAAATCGAACAGTTGGc                            <  2:356155‑M2/210‑1 (MQ=255)
                                                                                                                                                                                                                  ttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCGATGGTAGACGGTAACGCCTACGAGTTGCTGCTGGATCTGTTCGAAACCAAAATCGAACAGTTGGCAg                          >  2:414887‑M2/28‑239 (MQ=255)
                                                                                                                                                                                                                             cgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCGATGGTAGACGGTAACGCCTACGAGTTGCTGCTGGATCTGTTCGAAACCAAAATCGAACAGTTGGCAGATGAAATTGaa               <  2:687189‑M2/223‑1 (MQ=255)
                                                                                                                                                                                                                              gacggcggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCGATGGTAGACGGTAACGCCTACGAGTTGCTGCTGGATCTGTTCGAAACCAAAATCGAACAGTTGGCAGATGAAATTGaa               <  2:850216‑M2/223‑1 (MQ=255)
                                                                                                                                                                                                                                 cacggcctgcatCTCCTTCGTCTTCGGTGAAGGTGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCGATGGTAGACGGTAACGCCTACGAGTTGCTGCTGGATCTGTTCGAAACCAAAATCGAACAGTTGGCAGATGAAATTGAAAata           <  2:106857‑M2/227‑1 (MQ=255)
                                                                                                                                                                                                                                        tgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCGATGGTAGACGGTAACGCCTACGAGTTGCTGCTGGATCTGTTCGAAACCAAAATCGAACAGTTGGCAGATGAAATTGAAAATATCTATAg    <  2:137029‑M2/234‑1 (MQ=255)
                                                                                                                                                                                                                                          catCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCGATGGTAGACGGTAACGCCTACGAGTTGCTGCTGGATCTGTTCGAAACCAAAATCGAACAGTTGGCAGATGAAATTGAAAATATCTATAGCg  >  2:24922‑M2/4‑239 (MQ=255)
                                                                                                                                                                                                                                             |                                                                                                                                                                                                                                           
GGGAGTCCCGGTCATGCTGAGCGCATTTCAACTGGAAAATAACCGACTGACCCGGCTGGAAGTCGAAGAGTCACAACCCCTTGTAAATGCAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCAGTCGATGGTAGACGGTAACGCCTACGAGTTGCTGCTGGATCTGTTCGAAACCAAAATCGAACAGTTGGCAGATGAAATTGAAAATATCTATAGCG  >  NC_000913/4001412‑4001884

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.