Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	4542554	4542923	370	22 [19]	[19] 20	[fimE]	[fimE]

GGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGACT‑CATCCTCATATGTTAAGGCATG‑C‑TTGCGGTTATGAATTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAA  >  NC_000913/4542315‑4542693                                                                                                                                                                                                                                                  |                                                                                                                                             ggAAAGGCCTTGACCGGACTGACGCTTTTTTTTTTTCCGGCCGGGGGAGGCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGAGATGCCGGTATTGAAGCTGGAACCGTAACGGAGACT‑CATCCTCATATGTTAAGGCATG‑C‑TTGCGGTTATGAATTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATAcc                                                                                                                                              <  2:508477/239‑1 (MQ=255)                            tatttattTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGACT‑CATCCTCATATGTTAAGGCATG‑C‑TTGCGGTTATGAATTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGGAATATTCGCCATACTGTGCGTTTTACCGCCGGTAATGCTGCCCGTTTTTCCGGa                                                                                                                   >  1:632476/1‑239 (MQ=255)                                    ttcccccggggggggtggCTTTCCCCCCAGGGGGCCTTGCGTATTTCTCGGTGTGCCGGTTTGGAACCTGAAACCGTAACCAAAGCT‑CTCCCTGATAT‑TTAAGGCAAGTC‑TTGGGGTAATGAATTGGGGGGGGGTGGTGCAGATCCTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATCCGCCATACTGTGCGTTATACCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGga                                                                                                           <  1:220803/223‑1 (MQ=255)                                    tctcGCCGGGGGAGGCGGCTTTCCCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGACCCGTACCGCAGCCT‑CATCCTCATATGTTAAGGCATG‑C‑TTGCGGTTATGAATTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGga                                                                                                           <  2:300802/239‑1 (MQ=255)                                    tctcGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGACT‑CATCCTCATATGTTAAGGCATG‑C‑TTGCGGTTATGAATTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTTGCCATACTGTGCGTTATACCCCCAGTAATGTTGCCCGTTTTGCCGG‑TTATgggga                                                                                                          >  1:623202/1‑237 (MQ=255)                                    cctcGCCGGGGGAGTCGGCTTTCCCGCCAGGAGGCCTATCGCATTATTCGGGATGCCGGTATTGAAGCTGGAACCGTAACGCAGACT‑CATCCTCATATGTTAAGGCATG‑C‑TTGCGGTTATGAATTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGga                                                                                                           <  2:632476/238‑1 (MQ=255)                                      tcGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGACT‑CATCCTCATATGTTAAGGCATG‑C‑TTGCGGTTATGAATTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGgaaa                                                                                                         >  2:220803/1‑239 (MQ=255)                                        gccgcGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGACT‑CATCCTCATATGTTAAGGCATG‑C‑TTGCGGTTATGAATTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATAcc                                                                                                                                              >  1:686266/1‑200 (MQ=255)                                        gccgcGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGAATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGACT‑CATCCTCATATGTTAAGGCATG‑C‑TTGCGGTTATGAATTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATAcc                                                                                                                                              <  2:686266/200‑1 (MQ=255)                                               ggggcGGCTTTTCCCCAAGCAGGTCTATGTCATTTTTCGCGAAGCCGGTTTTTAAGTTGGAACCGTAACGCAGACT‑CATCCTCATATGTTAAGGCATG‑C‑TTGCGGTTATGAATTGGCGGAGCGTGTTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAaataat                                                                                                 <  2:618614/234‑1 (MQ=255)                                                        ttCCCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGGTGGAACCGTAACGCAGACT‑CATCCTCATATGTTAAGGCATG‑C‑TTGCGGTTATGAATTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACg                                                                                       <  2:210345/239‑1 (MQ=255)                                                                   agGCCTATCGCATTATGCGCGATGCCGGTATTGAAGCTGGAACCGTAGCGCAGACT‑CATCCTCATATGTTAAGGCATG‑C‑TTGCGGTTATGAATTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTaaa                                                                             <  2:603603/238‑1 (MQ=255)                                                                   agGCCTATCCAATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGACT‑CATCCTCATATGTTAAGGCATG‑C‑TTGCGGTTATGAATTGGGGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTaaa                                                                             <  2:623202/238‑1 (MQ=255)                                                                         ttCGCTTTTTCCGCGATGCCGGTATTGAAGGTGGAACCTTAACGCAGACT‑TATCCTCATGTTTTAAGGTTTT‑C‑TTGCGGTTATGAATTGGCGGAGCGTGGTGCAGATTCTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAaagagaa                                                                      <  2:802787/238‑1 (MQ=255)                                                                         tcccgattttaccggttGCCGGTTTTGAAGTGGGACCCGT‑ACACAGTGTCCACCCTAATATTTAAAGGC‑TG‑CTTTGCGGTATAGAATTGGGGGGGCGGGGTAGAGATACCTGTTAAATTAAGGTTTATCTGGGGAATCAAAATTTTCGCCATACTGGGGTTTATACCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAGTTAAAaagagaa                                                                      <  1:286676/223‑1 (MQ=255)                                                                         tacgaattattCGGGATGCCGGTATTGAAGCTGGAACCGTAACGAAGACT‑CATCCTCATATGTTAAGGCATG‑C‑TTGCGGTTATGAATTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAaagagaa                                                                      <  2:771861/234‑1 (MQ=255)                                                                              attagtCGCGATGCGGGTATTGAAGCTGGACCCGTAACGCAGACT‑CATCCTCATTTGTTAAGGCATG‑C‑TTGCGGTTATGAATTGGCGGATCGTGGTGCAGATCCTCGTTTAATTCAGTATTATCTCGGGCATCGAAAAATCCGCCATACTGTGCGTTATACCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGt                                                                 <  2:512218/239‑1 (MQ=255)                                                                                                                                       gTTAAGGCATG‑C‑TTGCGGTTATGAATTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGTTAATAAAGTTAAAAAAACAaataaata                     >  2:633074/1‑227 (MQ=255)                                                                                                                                           aGGCATG‑C‑TTGCGGTTATGAATTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAaat                                                                                                    >  1:134423/1‑144 (MQ=255)                                                                                                                                           aGGCATG‑C‑TTGCGGTTATGAATTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAaat                                                                                                    <  2:134423/144‑1 (MQ=255)                                                                                                                                              cATG‑C‑TTGGGGTAATGAATGGGGGGGGGGGGGTGCAGATACTCGTTAAATTCGGGATTACTCCGGGCATCGAAATATTCGCAATACGTGGGGTTAAACCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCaa   <  2:103116/238‑1 (MQ=255)                                                                                                                                               tag‑C‑TTGCGGTAAAGAATTGGCGGAGCGTGGTGAAGAACTTCGTTTAATTGAGGATTATCTCGGTCATCGAAATATTCGCCATACTGTGCTTTATACCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCaaa  <  2:532587/236‑1 (MQ=255)                                                                                                                                                                                                                                                  |                                                                                                                                             GGAAAGGCGCTGACCGGACTGACGCTATATTTATTTCTCGCCGCGGGAGTCGGCTTTCTCGCCAGCAGGCCTATCGCATTATTCGCGATGCCGGTATTGAAGCTGGAACCGTAACGCAGACT‑CATCCTCATATGTTAAGGCATG‑C‑TTGCGGTTATGAATTGGCGGAGCGTGGTGCAGATACTCGTTTAATTCAGGATTATCTCGGGCATCGAAATATTCGCCATACTGTGCGTTATACCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAA  >  NC_000913/4542315‑4542693

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑