| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,588,515 | A→C | 17.0% | V222G (GTC→GGC) | ugpC ← | sn‑glycerol‑3‑phosphate ABC transporter ATPase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,588,515 | 0 | A | C | 17.0% | 98.1 / 2.1 | 48 | V222G (GTC→GGC) | ugpC | sn‑glycerol‑3‑phosphate ABC transporter ATPase |
| Reads supporting (aligned to +/- strand): ref base A (25/14); new base C (2/7); total (27/21) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.06e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.34e-01 | |||||||||||
TCCATCACCATCGGTACGCCGCCTTCTGCCTGCGAGCTTAGCGCAATATGTTCCGGGCGAATGCCGAGAGTCATTTTACGCCCGG‑CATACTGACGGTAGCCACCGTTTAGCGGCAGCTCAATA‑CCGCCGTCCAGTTCGAAATGCGTGCCTTCGTTATTCACGCGGCCTGTCAGCAGGTTCATCGCCGGACTGCCGATAAAACTCGCTACAAACAGGCTGGCGGGCTTTTCGTAGACTTCAACTGGTGTGCCAATCTGTTCGGCAACACCGCCGTTCATCACCATTACTCGCTGGGCGAGCGTCATCGCTTCAACCTGATCGTGAGTAACGTAGAGTGAAGTCGTTTTCAGGCGACGGTGCAACTGTTGCAGTTCAAGACGC‑ATCTGCACGCGCAGCTTGGCATCGAGGTTAGAGAGCGGCTCATCAAACAGGAACACCGCCGGATCGCGCACAATCGCGC > NC_000913/3588281‑3588740 | tCCATCACCATCGGTACGCCGCCTTCTGCCTGCGAGCTTAGCGCAATATGTTCCGGGCGAATGCCGAGAGTCATTTTACGCCCGG‑CATACTGACGGTAGCCACCGTTTAGCGGCAGCTCAATA‑CCGCCGTCCCGTTCGAAATGCGTGCCTTCGTTATTCCCGCGGCCTGTCAGCAGGTTCATCGCCGGACTTCCGATAAAACCCGCTACAAACAGGCGGGCGGGCTTTTTGTAAACTTc > 1:197620/1‑239 (MQ=255)tCCATCACCATCGGTACGCCGCCTTCTGCCTGCGAGCTTAGCGCAATATGTTCCGGGCGAATGCCGAGAGTCATTTTACGCCCGG‑CATACTGACGGTAGCCACCGTTTAGCGGCAGCTCAATA‑CCGCCGTCCAGTTCGGAATCCCGGCCTTCGTTATTCACGCGGCCTGTCAGCAGGTTTATCGCCGGACTGCCGATAAAACCCGCCCCAAAAAGGCGGGGGGGCTTTTCCGAAACTTc > 1:44085/1‑239 (MQ=255)tCCATCACCATCGGTACGCCGCCTTCTGCCTGCGAGCTTAGCGCAATATGTTCCGGGCGAATGCCGAGAGTCATTTTACGCCCGG‑CATACTGACGGTAGCCACCGTTTAGCGGCAGCTCAATA‑CCGCCGTCCAGTTCGAAATGCGTGCCTTCGTTATTCACGCGGCCTGTCAGCAGGTTCATCGCCGGACTGCCGTTAAAACTCGCTACAAACAGCCTGGCGGGCGTTTCCTAGACCTc > 2:812800/1‑239 (MQ=255) cgccATCGGTACGCCGCCTGCGGCCTGCGAGCTTAGCGAAATAGGTTCCGGGCGAATGCCGAGAGTCATTTTACGCCCGG‑CATACTGACGGTAGCCACCGTTTAGCGGCAGCTCAATA‑CCGCCGTCCAGTTCGAAATGCGTGCCTTCGTTATTCACGCGGCCTTTCAGCAGGTTCATCGCCGGACTGCCGATAAAACTCGCTACAAACAGGCTGGCGGGCTTTTCGTAGACTTCAACTg < 2:285231/237‑1 (MQ=255) cctggggtcctcccccTTTTGGCTGCGGGCGTAGGGAATTAGGTTCCGGGCGAATGCCGAGGGTCATTTTACGCCCGG‑CAGACTGGCGGTAGCCACCGTTTAGCGGCAGCTCAATG‑CCGCCGTCCAGTTCGAAATGCGTGCCTTCGTTATTCACGCGGCCTGTCAGCAGGTTCATCGCCGGACGGCCGATAAAACTCGCTACAAACAGGCTGGCGGGCTTTTCGTAGACTTCAACTGgt < 1:63355/225‑1 (MQ=255) gctgtcgcccccttgttgcctgcGACGTTAGCGTATGTGGTTCCGGGCGAGTGCCGGGAGGCATTTTCCGCCCGG‑CATACTGACGGTAGCCACCGTTTAGCGGCAGCTCAATA‑CCGCCGTCCAGTTCGAAATGCGTGCCTTCGTTATTCACGCGGCCTGTCAGCAGGTTCATCGCCGGACTGCCGATAAAACTCGCTACAAACAGGCTGGCGGGCTTTTCGTAGACTTCAACTGGtgtg < 1:119867/223‑1 (MQ=255) accccgccTTCTGCCTGCGAGCTTAGCGCAATATGTTCCGGGCGAATGCCGAGAGTCATTTTACGCCCGG‑CATACTGACGGTAGCCACCGTTTAGCGGCAGCTCAATA‑CCGCCGTCCAGTTCGAAATGCGTGCCTTCGTTATTCACGCGGCCTGTCAGCAGGTTCATCGCCGGACTGCCGATAAAACTCGCTACAAACAGGCTGGCGGGCTTTTCGTAGACTTCAACTGGTGTGCCAAt < 2:800514/236‑1 (MQ=255) ccgccTTCTGCCTGCGAGCTTAGCGCAATATGTTCCGGGCGAATGCCGAGAGTCATTTTACGCCCGG‑CATACTGACGGTAGCCACCGTTTAGCGGCAGCTCAATA‑CCGCCGTCCAGTTCGAAATGCGTGCCTTCGTTATTCACGCGGCCTGTCAGCAGGTTCATCGCCGGACTGCCGATAAAACTCGCTACAAACAGGCTGGCGGGCTTTTCTTAGACTTCAACtcgatggccaa > 2:792021/1‑225 (MQ=255) gcGAGCTTAGCGCAATATGTTCCGGGCGAATGCCGAGAGTCATTTTACGCCCGG‑CATACTGACGGTAGCCACCGTTTAGCGGCAGCTCAATA‑CCGCCGTCCAGTTCGAAATGCGTGCCTTCGTTATTCACGCGGCCTGTCAGCAGGTTCATCGCCGGACTGCCGATAAAACTCGCTACAAACAGGCTGGCGGGCTTTTCGTGGACTTCAACCGGTGGGCCAATCCGTTCGGCAAAAcc > 2:563915/1‑238 (MQ=255) ttctaattgtgtgcgggggaaaTGCCGGGGGTCTTTTTCCCCCCGG‑CATACTGGCGGTAGCCAGCTTTTAGCGGAAGCACAATC‑CCGCCGTCCAGTGCGAAATCGTTGCCTTGGTTATTCCCGCGGCCTGTCGGCAGGTTCATCGCCGGACTGCCGATAAAACTCGCTACAAACAGGCTGGCGGGCTTTTCGTAGACTTCAACTGGTGTGCCAATCTGTTCGGCAACACCGCCGTtcat < 1:794354/219‑1 (MQ=255) gcctgagtttGTTCCGCGCCATGGTCGAGGGTTTTTTTACGCCGGGACAT‑CTGGCGGAGGCCCCCGTTTGGC‑GCACCCCAAAACCCGCCGGCCAGTTCGAAAGGCGGGCCTCCGTTATCACCGGGGTCGGTCGGCAGGTTCACCGCCGGACTGCCGATAAAACCCGCTACAAACAGGCTGGCGGGCTTTTCGTAGACTTCAACTGGTGTCCCAATCTGTTCGGCAACACCGCCGTtcat < 1:403153/230‑1 (MQ=255) gTTCCGGGCGAATGCCGAGAGTCATTTTACGCCCGG‑CATACTGACGGTAGCCACCGTTTAGCGGCAGCTCAATA‑CCGCCGTCCCGTTCGAAATGCGGGCCTTCGTTATTCACGCGGCCTGTCAGCAGGTTCAACGCCGGACTTCCGATAAAACTCGCAACAAACAGGCGAGCGGGCCTTTCCGACACTTCAACACGTGGTCCAATATATTCGGGCAAACCCCCGTCCACCACCATCAc > 1:110362/1‑238 (MQ=255) gggCGAATGCCGAGAGTCATTTTACGCCCGG‑CATACTGACGGTAGCCACCGTTTAGCGGCAGCTCAATA‑CCGCCGTCCAGTTCGAAATGCGTGCCTTCGTTATTCACGCGGCCTTTCAGCAGGTTCATCGCCGGACTGCCGATAAACATCGCTCACACCAGTCTGGCAGGCTTTTCGTCGACTTCAACTCGGGTGCCAACCTGTTTGGCCACCACTCCCGTCCTCACCAtaaacccggt > 1:150735/1‑230 (MQ=255) gCGAATGCCGAGAGTCATTTTACGCCCGG‑CATACTGACGGTAGCCACCGTTTAGCGGCAGCTCAATA‑CCGCCGTCCAGTTCGAAATGCGTGCCTTCGTTATTCACGCGGCCTGTCAGCAGGTTCATCGCCGGACTGCCGATAAAACTCGCTACAAACAGGCTGGCGGGCTTTTCGTAGAc < 2:569124/180‑1 (MQ=255) aaTGCCGAGAGTCATTTTACGCCCGG‑CATACTGACGGTAGCCACCGTTTAGCGGCAGCTCAATA‑CCGCCGTCCAGTTCGAAATGCGTGCCTTCGTTATTCACGCGGCCTGTCAGCAGGTTCATCGCCGGACTGCCGATAAAACTCGCTACAAACAGGCTGGCGGGCTTTTCGTAAACTTCAACTGGTGTGCCAATCTGTTCGGCAACACCCCCGTTCATAACCATTACTCGCTGGGCGa > 2:681255/1‑239 (MQ=255) aaTTTTACGCCCGG‑CATACTGACGGTAGCCACCGTTTGGCGGCAGCTCAATC‑CCGCCGTCCAGTTCGAAATGCGTGCCTTCGTTATTCACGCGGCCTGTAAGCAGGTTCATCGCCGGACTGCCGATAAACCTCGCTACAAACAGGCTGGGGGGCTTTTCGTAGCCTTCAACTGGTGTGCCAATCTGTTCGGCAACACCGCCGTTCATCACCATTACTCGCTGGGCGAGCGTCATCGCtt < 2:783982/238‑1 (MQ=255) tccccacGG‑CATACTGACGGTAGCCACCGTTTAGCGGCAGCTCAATA‑CCGCCGTCCAGTTCGAAATGCGTGCCTTCGTTATTCACGGGGCCTGTCAGCAGGTTCATCGCCGGACTGCCGATAAAACTCGCTACAAACAGGCTGGCGGGCTTTTCGTAGCCTTCAACTGGTGTGCCAATCTGTTCGGCAACACCGCCGTTCATCACCATTACTCGCTGGGCGAGCGTCATCGCTTCAAcc < 2:791805/233‑1 (MQ=255) cGCCCGG‑CATACTGACGGTAGCCACCGTTTAGCGGCAGCTCAATA‑CCGCCGTCCAGTTCGAAATGCGTGCCTTCGTTATTCACGCGGCCTGTCAGCAGGTTCATCGCCGGACTGCCGATAAAACTCGCTACAAACAGGCTGGCGGGCTTTTCGTAGACTTCCACTGGTGTGCCAATCTGTTCGGCAACACCGCCGTTCATCACCATTACTCCCTGGGCGAGTGTCCTCGCTTCAACCtt > 2:447913/1‑238 (MQ=255) ccggattACGGACGGTAGCCACCGTTTAGCGGCAGCTCAATA‑CCGCCGTCCAGTTCGAAATGCGTGCCTTCGTTATTCACGCGGCCTGTCAGCAGTTTCATCGCCGGACTGCCGATAAATCTCGCTACAAACAGGCTGGCGGGCTTTTCGTAGCCTTCAACTGGTGTGCCAATCTGTTCGGCAACACCGCCGTTCATCACCATTACTCg < 2:116092/203‑1 (MQ=255) gg‑CATACTGACGGTAGCCACCGTTTAGCGGCAGCTCAATA‑CCGCCGTCCAGTTCGAAATGCGTGCCTTCGTTATTCACGCGGCCTGTCAGCAGGTTCATCGCCGGACTGCCGATAAAACTCGCTACAAACAGGCTGGCGGGCTTTTCGTAGACTTACACTGGGGGGCCAATCTTTTCGCCAAAACCACCCGTCATCACCCTTACCCCCTGGGCGAggcgcacccctcacacccgtactg > 1:372089/1‑216 (MQ=255) ggaaaccggcgggTGGCCCCCGTTTAGGGGCAGCTCAATC‑CCGCCGCCCGGTTCGAAATGCGTGCCTTCGTTATTCACGCGGCCTGTCAGCAGGTTAATCGCGGGACTGCCGATAAAACTCGCTACAAACAGGCTGGCGGGCTTTTCGTAGACTTCAACTGGTGTGCCAATCTGTTCGGCAACACCGCCGTTCATCACCATTACTCGCTGGGCGAGCGTCATCGCTTCAACCTGATCGt < 2:884161/228‑1 (MQ=255) cccgtttggggggcccacatccccgccgCCCGGTTCAAAAGGGGGGCCTGCGTTATCCACGGGGCCTGTCGCCAGGTTCATCGCCGGCCGGCCGATAAAACTCGCTACAAGCGGGCTGGCGGGCTTTTCGTAGCCTTCAACTGGTGTGCCAATCTGTTCGGCAACACCGCCGTTCATCACCATTACTCGCTGGGCGAGCGTCATCGCTTCAACCTGATCGTGAGTAACGTAGAGTGAAg < 1:21615/217‑1 (MQ=255) gTTTAGCGGCAGCTCAATA‑CCGCCGTCCAGTTCGAAATGCGTGCCTTCGTTATTCACGCGGCCTGTCAGCAGGTTCATCGCCGGACTGCCGATAAAACTCGCTACAAACAGGCTGGCGGGCTTTTTGTAGCCTTCAACTGGTGTGCCAATCTGTTCGGCAACACCGCCGTTCATCACCATTACTCGCTGGTCTGCCGTCATCGCTTCCACCTGATCGTGCGCAACGTCGAGGGAAGACg > 2:338398/1‑239 (MQ=255) cAGCTCAATA‑CCGCCGTCCAGTTCGAAATGCGTGCCTTCGTTATTCACGCGGCCTGTCAGCAGGTTCATCGCCGGACTGCCGATAAAACTCGCTACAAACAGGCTGGCGGGCTTTTCGTAGACTTCAACTGGTGTGCCAATCTGTTCGGCAACACCGCCGTTCATCACCATTACTCGCTGGGCGAGCGTCATCGCTTCAACCTGATCGTGAGTAACGTAGAGGGAAGTGCGTTTCAGGc > 2:6246/1‑239 (MQ=255) gCTCAATA‑CCGCCGTCCAGTTCGAAATGCGTGCCTTCGTTATTCACGCGGCCTGTCAGCAGGTTCATCGCCGGACTGCCGATAAAACTCGCTACAAACAGGCTGGCGGGCTTTTCGTAGACTTCAACTGGTGGGCCAATCTGTTCGGCAACACCGCCGTTCATCACCATTAATCGCTGGGCGATGGTCCTCGCTTCAACCTGATCGTGAGAAACGAAAAGTGAAGTCGTTTTCAGGGGa > 1:727037/1‑239 (MQ=255) aaTC‑CCGCCGTCCAGTTCAAAAGGCGGGCCTTCGTTATTCCGGGGGCCTGTCAGCAGGTTCATCGCCGGACTGCCGATAAAACTCGCTACAAACAGGCTGGCGGGCTTTTCGTAGACTTCAACTGGTGTGCCAATCTGTTCGGCAACACCGCCGTTCATCACCATTACTCGCTGGGCGAGCGTCATCGCTTCAACCTGATCGTGAGTAACGTAGAGTGAAGTCGTTTTCAGGCGACGGt < 2:197620/239‑1 (MQ=255) cgcctTCCATTTCAAAAGGCTGGCCTTCGTTATTCCCGGGGCCTGTCAGCAGTTTCACCGCCGGCCTGCCGATAAACCTCGCTACAAACAGGCTGGCGGGCTTTTCGAAGACTTCAACTGGTGTGCCAATCTGTTCGGCAACACCGCCGTTCATCACCATTACTCGCTGGGCGAGCGTCATCGCTTCAACCTGATCGTGAGTAACGTAGAGTGAAGTCGTTTTCAGGCGACGGTGCAAc < 2:435992/239‑1 (MQ=255) ccgTCCAGTTCGAAATGCGTGCCTTCGTTATTCACGCGGCCTGTCAGCAGGTTCATCGCCGGACTGCCGATAAAACTCGCTACAAACAGGCTGGCGGGCTTTTCGTAGACTTCAACTGGTGTGCCAATCTGTTCGGCAACACCGCCGTTCATCACCATTACTCGCTGGGCGAGCGTCATCGCTTCAACCTGATCGTGAGTAACGTAGAGTGAAGTCGTTTTTAGGCGCCGGTGCa > 2:143264/1‑235 (MQ=255) ccgTCCAGTTCGAAATGCGTGCCTTCGTTATTCACGCGGCCTGTCAGCAGGTTCATCGCCGGACTGCCGATAAAACTCGCTACAAACAGGCTGGCGGGCTTTTCGGAGCCTTCAAATGGTGGGCCAATCTGTTCGGCAACACCGCCGTTCATCACCATTACTCGCTGGGCGGGGGGCATCCCTTCAACCTGATCGTGAGTAACGTAGAGGGGAGGCGTTTTCAGGCGCCgggccaaagg > 1:726720/1‑231 (MQ=255) tCCAGTTCGAAATGCGTGCCTTCGTTATTCACGCGGCCTGTCAGCAGGTTCATCGCCGGACTGCCGATAAAACTCGCTACAAACAGGCTGGCGGGCTTTTCGTAGACTTCAACTGGTGTGCCAATCTGTTCGGCAACACCGCCGTTCATCACCATTACTCGCTGGGCGAGCGTCATCGCTTCAACCTGATCGTGAGTAACGTAGGGGGAAGTCGTTTTCAGGCGACGGTGCaaacgtt > 2:442713/1‑233 (MQ=255) cAGTTCGAAATGCGTGCCTTCGTTATTCACGCGGCCTGTCAGCAGGTTCATCGCCGGACTGCCGATAAAACTCGCTACAAACAGGCTGGCGGGCTTTTCGTAGACTTCAACTGGTGTGCCAATCTGTTCGGCAACACAGCCGTTCATCACCATTACTCGCTGGGCGAGCGTCATCGCTTCAACCTGATc > 2:206542/1‑189 (MQ=255) aaTGCGTGCCTTCGTTATTCACGCGGCCTGTCAGCAGGTTCATCGCCGGACTGCCGATAAAACTCGCTACAAACAGGCTGGCGGGCTTTTCGTAGACTTCAACTGGTGTGCCAATCTGTTCGGCAACACCGCCGTTCATCACCATTACTCGCTGGGCGAGCGTCATCGCTTCAACCTGATCGTGAGTAACGGAGAGTGAAGTCGTTTTCAGGCGACGGTGCAACTGTTGCAGTTCAAg > 2:857325/1‑238 (MQ=255) cACGCGGCCTGTCAGCAGGTTCATCGCCGGACTGCCGATAAAACTCGCTACAAACAGGCTGGCGGGCTTTTCGTAGACTTCAACTGGTGTGCCAATCTGTTCGGCAACACCGCCGTTCATCACCATTACTCGCTGGGCGAGCGTCATCGCTTCAACCTGATCGTGAGTAACGTAGAGGGAAGTCGTTTTCAGGCGACGGTGCACCTGTTGCAGTTCAATACGA‑ATCTGCCCGGCCAGCt > 2:857655/1‑239 (MQ=255) gcgGCCTGTCAGCAGGTTCATCGCCGGACTGCCGATAAAACTCGCTACAAACAGGCTGGCGGGCTTTTCGTAGACTTCAACTGGTGTGCCAATCTGTTCGGCAACACCGCCGTTCATCACCATTACTCGCTGGGCGAGCGTCATCGCTTCAACCTGATCGTGAGTAACGTAGAGTGAAGTCGTTTTCAGGCGACGGTGCAACTGTTGCAGTTCAAG‑CGCAATCTGCACGCGCGGCCTgg > 2:452166/1‑239 (MQ=255) cccTGTCGCCGGGTTCATCCGCGGCTCGCCGAAAAACCCCGCTAAAAACAGGCGGGGGGGCTTTTCGTAGACTTCAACTGGTGTGCCAATCGTTTCGGCAACACCGCCGTTCATCACCATTACTCGCTGGGCGAGCGTCATCGCTTCAACCTGATCGTGAGTAACGTAGAGTGAAGTCGTTTTCAGGCGACGGTGCAACTGTTGCAGTTCAAGACGC‑ATCTGCACGCGCAGCTTGGCAt < 1:491364/238‑1 (MQ=255) ccTGTCAGCAGGTTCCTCCCCGGACTGCCGATAAACCTCGCTACAAACGGGCTGGCGGGCTTTTCGTAGCCTTCAACTGGTGTGCCAATCTGTTCGGCAACCCCGCCGTTCATCACCATTACTCGCTGGGCGAGCGTCATCGCTTCAACCTGATCGTGAGTAACGTAGAGTGAAGTCGTTTTCAGGCGACGGTGCAACTGTTGCAGTTCAAGACGC‑ATCTGCACGCGCAGCTTGGCAt < 2:643615/238‑1 (MQ=255) taaagaggcgttttggcGCCGTGCTGCCGAAAAACCTCGCTAAAAACCGGGTGGGGGGCTTTTCGTAGCCTTCAACTGGTGTGCCAATCTGTTCGGCACCCCCGCCGTTCATCACCATTACTCGCTGGGCGAGCGTCATCGCTTCAACCTGATCGTGAGTAACGTAGAGTGAAGTCGTTTTCAGGCGACGGTGCAACTGTTGCAGTTCAAGACGC‑ATCTGCACGCGCAGCTTGGCATCg < 1:140781/223‑1 (MQ=255) cagcagGTTCAGCGCCGGACTGCCGATAAAACTCGCTAAAAACAGGCTGGCGGGCTTTTCGTAGACTTCAACTGGTGTGCCAATCTGTTCGGCAACACCGCCGTTCATCACCATTACTCGCTGGGCGAGCGTCATCGCTTCAACCTGATCGTGAGTAACGTAGAGTGAAGTCGTTTTCAGGCGACGGTGCAACTGTTGCAGTTCAAGACGC‑ATCTGCACGCGCAGCTTGGCATCGAgg < 2:815306/238‑1 (MQ=255) ggTTCATCGCCGGACTGCCGATAAAACTCGCTACAAACAGGCTGGCGGGCTTTTCGTAGACTTCAACTGGTGTGCCAATCTGTTCGGCAACACCGCCGTTCATCACCATTACTCGCTGGGCGAGCGTCATCGCTTCAACCTGATCGTGAGTAACGTAGAGTGAAGTCGTTTTCAGGCGACGGTGCAACTGTTGCAGTTCAAGACGC‑ATCTGCACGCGCAGCTTGGCATCGAGGTTagag > 2:15707/1‑239 (MQ=255) ttCATCGCCGGACTGCCGATAAAACTCGCTACAAACAGGCTGGCGGGCTTTTCGTAGACTTCAACTGGTGTGCCAATCTGTTCGGCAACACCGCCGTTCATCACCATTACTCGCTGGGCGAGCGTCATCGCTTCAACCTGATCGTGGGTAACGTAGAGTGAAGTCGTTTTCAGGCGACGGGGCAACTGTTGCAGTTCAAAACGC‑CTCTGCACGCGGAGCTTGGCACCGAGGTTagagag > 2:824633/1‑239 (MQ=255) cATCGCCGGACTGCCGATAAAACTCGCTACAAACAGGCTGGCGGGCTTTTCGTAGACTTCAACTGGTGTGCCAATCTGTTCGGCAACACCGCCGTTCATCACCATTACTCGCTGGGCGAGCGTCATCGCTTCAACCTGATCGTGAGTAACGTAGAGGGAAGTCGTTTTCAGGCGACGGTGCAACTGTTGCAGTTCAAGACGC‑ATCTGCCCGCCCAGCTTGGCATCGAGGTTCGAGAACg > 2:721315/1‑239 (MQ=255) cgcactgcactaaaatcccGCTACAAACGGGCTGGCGGGTTTTTCGTAACCTTAAACTGGTGGTCCAATCTGTTCGGCAACACCGCCGTTCATCACCATTACTCGCTGGGCGGGCGTCATCGCTTCAACCTGATCGTGAGTAACGTAGAGTGAAGTCGTTTTCAGGCGACGGTGCAACTGTTGCAGTTCAAGACGC‑ATCTGCACGCGCAGCTTGGCATCGAGGTTAGAGAGCGGCtcat < 1:15707/221‑1 (MQ=255) gACTGCCGATAAAACTCGCTACAAACAGGCTGGCGGGCTTTTCGTAGACTTCAACTGGTGTGCCAATCTGTTCGGCAACACCGCCGTTCATCACCATTACTCGCTGGGCGAGCGTCATCGCTTCAACCTGATCGTGAGTAACGTAGAGTGAAGTCGTTTTCAGGCGACGGTGCAACTGTTGCAGTTCAAGACGC‑ATCTGCACGCGCAGCTTTGCATCGAGGTTATCAACCGGCccatca > 2:141365/1‑239 (MQ=255) gACTGCCGATAAAACTCGCTACAAACAGGCTGGCGGGCTTTTCGTAGACTTCAACTGGTGTGCCAATCTGTTCGGCAACACCGCCGTTCATCACCATTACTCGCTGGGCGAGCGTCATCGCTTCAACCTGATCGTGAGTAACGTAGAGTGAAGTCGTTTTCAGGCGACGGTGCAACTGTTGCAGTTCAAGACGC‑ATCTGCACGCGCAGCTTGGCATCGAGGTTagaga > 2:140781/1‑228 (MQ=255) aCTGCCGATAAAACTGGCTACAAACAGGTTGGCGGGTTTTTCGTAGACTTCAACTGGTGTCCCAATCTGTTCGGCAACACCGCCGTTCATCACCATTACTCGCTGGGCGAGCGTCATCGCTTCAACCTGATCGTGAGTAACGTAGAGTGAAGTCGTTTTCAGGCGACGGTGCAACTGTTGCAGTTCAAGACGC‑ATCTGCACGCGCAGCTTGGCATCGAGGTTAGAGAGCGGCtcatca < 2:580394/238‑1 (MQ=255) cTGGCGGGCTTTTCGTAGACTTCAACTGGTGTGCCAATCTGTTCGGCAACACCGCCGTTCATCACCATTACTCGCTGGGCGAGCGTCATCGCTTCAACCTGATCGTGAGTAACGTAGAGTGAAGTCGTTTTCAGGCGACGGTGCAACTGTTGCAGTTCAAGACGC‑ATCTGCACGCGCAGCTTGGCATCGAGGTTAGAGAGCGGCTCATCAAACAGGAACACCGCCGTATCGCGCCCaa > 2:208939/1‑238 (MQ=255) ggCGGGCTTTTCGTAGACTTCAACTGGTGTGCCAATCTGTTCGGCAACACCGCCGTTCATCACCATTACTCGCTGGGCGAGCGTCATCGCTTCAACCTGATCGTGAGTAACGTAGAGTGAAGTCGTTTTCAGGCGACGGTGCAACTGTTGCAGTTCAAGACGC‑ATCTGCACGCGCAGCTTGGCATCGAGGTTaga > 2:732244/1‑195 (MQ=255) ggtttttCGTCAACTTAAACTGTTGTCCAAACTTGTCCGGCAACCCCCCCGGTCATCACCATTACCCGGTGGGCGAGCGTCATCGCTTCAACCTGATCGTGAGTAACGTAGAGTGAAGTCGTTTTCAGGCGACGGTGCAACTGTTGCAGTTCAAGACGC‑ATCTGCACGCGCAGCTTGGCATCGAGGTTAGAGAGCGGCTCATCAAACAGGAACACCGCCGGATCGCGCACAATcgcgc < 2:498270/235‑1 (MQ=255) | TCCATCACCATCGGTACGCCGCCTTCTGCCTGCGAGCTTAGCGCAATATGTTCCGGGCGAATGCCGAGAGTCATTTTACGCCCGG‑CATACTGACGGTAGCCACCGTTTAGCGGCAGCTCAATA‑CCGCCGTCCAGTTCGAAATGCGTGCCTTCGTTATTCACGCGGCCTGTCAGCAGGTTCATCGCCGGACTGCCGATAAAACTCGCTACAAACAGGCTGGCGGGCTTTTCGTAGACTTCAACTGGTGTGCCAATCTGTTCGGCAACACCGCCGTTCATCACCATTACTCGCTGGGCGAGCGTCATCGCTTCAACCTGATCGTGAGTAACGTAGAGTGAAGTCGTTTTCAGGCGACGGTGCAACTGTTGCAGTTCAAGACGC‑ATCTGCACGCGCAGCTTGGCATCGAGGTTAGAGAGCGGCTCATCAAACAGGAACACCGCCGGATCGCGCACAATCGCGC > NC_000913/3588281‑3588740 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |