Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_000913 | 3,895,527 | G→C | 15.0% | A361G (GCG→GGG) | adeP ← | adenine permease, high affinity, adenine:H+ symporter |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 3,895,527 | 0 | G | C | 15.0% | 142.9 / 2.5 | 69 | A361G (GCG→GGG) | adeP | adenine permease, high affinity, adenine:H+ symporter |
Reads supporting (aligned to +/- strand): ref base G (28/28); new base C (7/5); total (35/34) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 7.53e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
ATCTTCAGGATAAACAGCAGCGCAACGATGATTACGCACGGGCTTAGATCACGCAGACGTCCGGTACCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGAACGGCAT‑CATCACGGCGGTAATAAACGCCGGAACAGATTCAGTAAGATCCTGCCA‑GTTCACGCGTGCCAGACTGG‑AAG‑TCATCAGCACGCCAACGTAAATCAGCGCA‑CCAGC‑TG‑C‑AGCGTAGCCT‑GGCA‑CCATCCCCGCCAGCGGCG‑ACAGAAAGATAACCAGCAGGAACAGCAGACCAACAAC‑CACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTTCATGCGC‑GGGAATTTCCCCTTCTCATCCGC > NC_000913/3895293‑3895765 | aTCTTCAGGATAAACAGCAGCGCAACGATGATTACGCACGGGCTTAGATCACGCAGACGTCCGGTACCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGAACGGCAT‑CATCACGGCGGTAATAAACGCCGGAACAGATTCAGTAAGATCATGCAC‑GTTTACCCGTGCCAGACTGG‑AAA‑TCATCAGACCGCCACCGGAAATAACCGCA‑c > 2:833942/1‑238 (MQ=255) ccgagtAAACAGCACCCAAACGATTATTACGCCCGGGCTTAGATCCCGCAGCCGTCCGGTACCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGAACGGCAT‑CATCACGGCGGTAATAAACGCCGGAACAGATTCAGTAAGATCCTGCCA‑GTTCACGCGTGCCAGACTGG‑AAG‑TCATCAGCACGCCAACGTAAATCAGCGCA‑CCAGC‑Tg < 1:833942/234‑1 (MQ=255) cAGGATAAACAGCAGCGCAACGCTGATTACGCACGGGCTTAGATCACGCAGACGTCCGGTACCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGAACGGCAT‑CATCACGGCGGTAATAAACGCCGGAACAGATTCAGTAAGATCCTGCCA‑GTTCACGCGTGCCAGACTGG‑AAG‑TCACCAGCACGCCAACGTAAATCAGCGCA‑CCAGC‑Tg < 2:750701/239‑1 (MQ=255) tAAACAGCATCGCAACGATGATTACGCACGGGCCTAGATCACGCAGACGTCCGGTACCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATTCCTTCGGTAATCGAGAAGCTGAACGGCAT‑CATCACGGCGGTAATAAACGCCGGAACAGATTCAGTAAGATCCTGCCA‑GTTCACGCGTGCCAGACTGG‑AAG‑TCATCAGCACGCCAACGTAAATCAGCGCA‑CCAGC‑TG‑C‑AGc < 2:598050/238‑1 (MQ=255) aaaaCAGCAGCCCAACGATGATTACGCCCGGGCTTAGAGCACGCAGACGTCCGGTACCGATTTTCATCACGGAGTAGGAAATAAAGCCCAGCTCGATACCCTCGGTAATTGAGAATCTGAACGGCAT‑CATCACGGCGGTAATAAACGCCGGAACGGATTCAGTAAGATCCTGCCA‑GTTCACGCGTGCCAGACTGG‑AAG‑TCATCAGCACGCCAACGTAAATCAGCGCA‑CCAGC‑TG‑C‑AGCg < 1:280126/238‑1 (MQ=255) gcaacccAACGATTATTACGCCCGGGCTGAGATCCCCCAGACGTCCGGTTCCGATTTTCATCCCGCAGGAGGAGATAAAGCCCAGCGGGATACCTTCGGTAATCGAGAAGCTGAACGGCAT‑CATCACGGCGGTAATAAACGCCGGAACAGATTCAGTAAGATCCTGCCA‑GTTCACGCGTGCCAGACTGG‑AAG‑TCATCAGCACGCCAACGTAAATCAGCGCA‑CCAGC‑TG‑C‑AGCGTAGCCt < 1:501233/233‑1 (MQ=255) gcAACGATGATTACGCACGGGCTTAGATCACGGAGACGTCCGGTACCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGAACGGCAT‑CATCACGGCGGTAATAAACGCCGGAACAGATTCAGTAAGATCCTGCCA‑GTTCACGCGTGCCAGACTGG‑AAG‑TCATCAGCACGCCAACGTAAATCAGCGCA‑CCAGC‑TG‑C‑AGCGTAGCCT‑GGCa < 2:277690/238‑1 (MQ=255) atTACGCACGGGCTTAGATCACGCAGACGTCCGGTACCGATTTTCATTACGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAATCGAGAAGCGGAACGGCAT‑CATCACGGCGGCAATAAACCCACGAACAGGTTCCATAAAAACCTGACA‑AGTCACGCGTGCCATACTGG‑AGG‑TCATCCACAAACCAAAGTAAACAAGCGAA‑CCAGC‑CG‑C‑GCCGAAACCG‑GGCA‑CCaacaccc > 1:758576/1‑232 (MQ=255) cacgggattagagtccggagcgttCCGGTGCCTATTGGCATCACGCGGGAGGAAAGAAAGCCCAGGGCGATCCCTGCGGAAATCGAGAAGCTGACGGGCAA‑CATGACGGCGGTAATAAACGCAGAAACAGATTCAGGAAGAACCTGCGA‑GTTCACGCGTGCCAGGCTGG‑AAG‑TCATCAGCCCGCAAACGTAATTGAGCGCA‑CCAGC‑TG‑C‑AGCGTAGCCT‑GGCA‑CCATCCCCGCCAgcgg < 1:785973/216‑1 (MQ=255) cACGGGCTTAGATCACGCAGACGTCCGGTACCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGAACGGCAT‑CATCACGGCGGTAATAAACGCCGGAACAGATTCAGTAAGATCCTGCCA‑GTTCACCCGTGCCAGGCTGG‑AAG‑TCATCAGCACCCCAACGTAAACAAACGCA‑CCAGC‑TG‑C‑AGCGTAGCCTGGGCA‑CCA‑CCCCGCCAgcg > 2:379072/1‑238 (MQ=255) cGCAGACGTCCGGTACCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGAACGGCAT‑CATCACGGCGGTAATAAACGCCGGAACAGATTCAGTCAAATCCCGCCA‑GATCACGCGTGCCACACTGG‑AAG‑ACACAACGACGCCCACCGAAATCAAGCCA‑CCAAC‑TC‑C‑AGCGAAGACC‑GGCA‑CCCACCCCCCCCCCGGCG‑CCacacaaaaaaa > 1:567746/1‑229 (MQ=255) cGCAGACGTCCGGTACCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGAACGGCAT‑CATCACGGCGGTAATAAACGCCGGAACAGATTCAGTAAGATCCTGCCA‑GTTCACGCGTGCCAGACTGG‑AAG‑TCATCAGCACGCCAACGTAAATCAGCGCA‑CCAGC‑TG‑C‑AGCGTAGCCC‑GGCA‑CCATCCCCGCCACCGGCG‑ACCGAAAGATAAc > 2:177540/1‑239 (MQ=255) cGCAGACGTCCGGTACCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGAACGGCAT‑CATCACGGCGGTAATAAACGCCGGAACAGATTAAGTAAGATCCTGCCA‑GTTCACCCGTGCCAAACTGG‑AAG‑TCATCAGCACGCCAACGTAAATCAGCGCA‑CCAGC‑TT‑C‑AGCGTACCCT‑GGCC‑CCACCCCCCCCAccggggccgagaagagaac > 2:590289/1‑224 (MQ=255) cGCAGACGTCCGGTACCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGAACGGCAT‑CATCACGGCGGTAATAAACGCCGGAACAGAATCAGTAAGATCCTTCCC‑GTTTAACCGCGCCAGAATTG‑AAG‑GCCTACGACCGCCAACCGAAATCAGCGCA‑CCAGC‑TG‑A‑AGCGCAACCT‑GGCA‑CCAACccccccccgggggaaacaaaaaaaaa > 1:267674/1‑219 (MQ=255) cGCAGACGTCCGGTACCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGAACGGCAT‑CATCACGGCGGTAATAAACGCCGGAACAAATTCAGTAAGATCCTGCCC‑ATTCACGCGTGCCAAACTGG‑AAA‑GTATCAGCACGCCCACCCAAATCAACCCC‑CCAAC‑TC‑C‑AGCGTAGCCT‑GGCA‑CCCACCCCCCCAgcggcgccgaaaaaaaaac > 1:756073/1‑226 (MQ=255) cGCAGACGTCCGGTACCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGAACGGCAT‑CATCACGGCGGGAATAAACGCCGGAAACGATTCAATAAGATCCTGCCA‑GTTCACCCGTGCCAGGCTGG‑AAG‑TCATCAGAACCCCAACGCAAATCAGCCGC‑CCAGCGTC‑A‑AGGGTA‑CCT‑GGCA‑CCAACccccccccccgcggcacgaagcaaac > 2:590348/1‑219 (MQ=255) cGCAGACGTCCGGTACCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGAACGGCAT‑CATCACGGCGGGAATAAACACCGGAACAGAATCAAGAAAAACCTGCCA‑GCTCACGCGTGCCCGACTGG‑AAG‑TCATACGCACGCCAACCGAAATAAGGCCA‑CCCAC‑TG‑C‑AACGAACCCT‑GGCA‑CCAACCCCCCCCgcggcggacaaaagagaaa > 1:691727/1‑226 (MQ=255) cGTCCGGTACCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGAACGGCAT‑CATCACGGCGGTAATAAACGCCGGGACAGATTCAATAAGATCCTGCCA‑GTTCACCCGTGCCAAACTGG‑AAG‑GCATCAACACCCCAACGTAAATCAAGCCA‑CCCCA‑CG‑C‑AGCGCACCCT‑GGCC‑CCCCCCCCCCCCCCGGCG‑CCAGAAAAATAAcacacca > 1:771979/1‑233 (MQ=255) gATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGAACGGCAT‑CATCACGGCGGTAATAAAAGCCCGAACAGATTCAGTAAAATCCTGCCA‑GGTCACGCGTGCCAGACTGG‑AAG‑TCCTCAGCACGCCAACGCAAATCAGCGCA‑CCCCC‑TG‑C‑AGCCGAGCCT‑GGCC‑CCATCCCCGCCACCCGCG‑ACCAAAAGAAAAAcacaagaaaaaacaaac > 1:141818/1‑224 (MQ=255) aTTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGAACGGCAT‑CATCACGGCGGTAATAAAAGCCGGAACAGATTCAGTAAGATCCTGCCA‑GTTCACCCGTGCCAGACTGG‑AAG‑TCATCCGCACGCCAACCTAAATCAGCGCA‑CCAGC‑TGCC‑AGCG‑AGCCT‑TGCA‑CCATCCCCGCCACCGGCG‑GCAGAAAGGTaaaccaccgggcaagcaaacc > 2:27336/1‑220 (MQ=255) cGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGAACGGCAT‑CATCACGGCGGTAATAAACGCCGGAACAGATTCAGTAAGATCCTGCCA‑GTTCACCCGTGCCAGACTGG‑AAG‑TCAACAGCACGCCCACGTAAAACAGCGCA‑CCAAC‑TG‑C‑CGCGTAGCCC‑GGCC‑CCACCCCCGCCACCGGCG‑GCCGAAAGATAAACACCAGGAACAGCAGACcaacaaac > 2:830343/1‑234 (MQ=255) aGTAGGAGAAAAAGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGAACGGCAT‑CATCCCGGCGGTAATAAACGCCGGAACAGATTCAGTAAGATCCTGCCA‑GTTCACGCGTGCCAGACTGG‑AAG‑TCATCAGCACGCCAACGTAAATCAGCGCA‑CCAGC‑TG‑C‑AGCGTAGCCT‑GGCA‑CCATCCCCGCCAGCGGCG‑ACAGaa < 2:548609/201‑1 (MQ=255) tAGGAGATAAAGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGAACGGCAT‑CATCACGGCGGGAATAAACGCAGGGACAAAATCAGTAAGATCCTGCCA‑GCTCACACGGGCCAGACTGG‑GAG‑TCATCCACCAGCCAACGTAACTCAAACCA‑CCCAC‑TG‑C‑GCGGTAAACC‑GGGC‑CACTCCCCCCCAACGGCG‑AACGAAAAATAACCACCAGGAAAAGCAAAcacaaaaacaacaccgc > 1:393705/1‑223 (MQ=255) aGGAGTAAAAGCCTAGCGCGATACCTTGGGTAATGGAGAAGCTGAACGGCAT‑CATCACGGCGGTAATAAACGCCGGAAAAGATTCAGTAAGATCCTGCCA‑GTTCACGCGTGCCAGACTGG‑AAG‑TCATCAGCACGCCAACGTAAATCAGCGCA‑CCAGC‑TG‑C‑AGCGTAGCCT‑GGCA‑CCATCCCCGCCAGCGGCG‑ACAGAAAGATAACCAGCAGGAACAGCAGACCAACAAC‑CACTGCCGt < 2:267674/238‑1 (MQ=255) aaaGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGAACGGCAT‑CATCACGGCGGTAATAAACGCCGGAACAGATTCAGTAAGATCCTGCCA‑GTTCACGCGTGCCAGACTGG‑AAG‑TCATCAGCACGCCAACGTAAATCAGCGCA‑CCAGC‑TG‑C‑AGCGTAGCCT‑GGCC‑CCATCCCCCCCAGCGGCG‑CCCGAAAGATAACCAGCAGGAACAGCAGACC‑ACAACACACTGCCGCCAAACCgg > 2:221780/1‑239 (MQ=255) aGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGAACGGCAT‑CATCACGGCGGTAATAAACGCCGGAACAGATTCAGTAAAATCCTGCCA‑GTTCACGCGGGCCAGACTGG‑AAG‑TCATCAGCACGCCAACGTAAATCAGCGCA‑CCAGC‑TG‑C‑AGCGTAGCCT‑GGCC‑CCATCCCCGCCAGCGGCG‑ACAGAAAGATAACCAGCAGGAACAGCAGACCAAAAAA‑CACTGCCGTCAGACCggg > 2:580011/1‑237 (MQ=255) aGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGAACGGCAT‑CATCACGGCGGTAATAAAAGCCGGAACAGATTCAGTAAGATACTGCCC‑GTTCACCCGTGCCAGACTGG‑AAG‑GCATCAGCACGCCCACGCAAAACAGCCCACCCCGC‑TC‑C‑A‑CCTAGCCC‑GGCA‑CCATCCCCCCCCGCGGCGCACA‑AAAGAAAAACAGCCGGaacaacaaaacaacaaaacaccgccccaaaccggga > 1:586843/1‑219 (MQ=255) ccgccgcattcccTTTGGTAATGGAGAA‑CTGAACGGCATCCCCCGCGGGGTAAAAAAACCCAGAAAAAGATTCAG‑AAGATCCCGGCATGTTCCCGCGGCCAAGATGGG‑AAGCTCA‑AACCCCCCCAACTAAAATCAGCCCC‑CCGGC‑TG‑A‑AGGTTAGCCT‑GCCC‑CCACCCCCGCCAGCGGCG‑CCAGAAAGATAACCAGCAGGAACAGCAGACCAACAAC‑CACTGCCGTCAGACCGGTACGa < 1:22414/228‑1 (MQ=255) gaaaTGGAAAAGCTGAACGGCAT‑CATCACGGCGGTAATAAACGCCGGAACAGATTAAGTAAGATCCTGCCA‑GTTCACGCGTGCCAGACTGG‑AAG‑TCATCAGCACGCCAACGTAAATCAGCGCA‑CCAGC‑TG‑C‑AGCGTAGCCT‑GGCA‑CCATCCCCGCCAGCGGCG‑ACAGAAAGATAACCAGCAGGAACAGCAGACCAACAAC‑CACTGCCGTCAGACCGGTACGACCGCCAACCGATACGc < 2:771979/236‑1 (MQ=255) cccaaaaGCTGACCGGCAA‑CATCCGGGGGTTAATAAACGCCGGAAAAGATTCAGTAAGACCCTGCCA‑GTTCACGCGTGCCAGACTGG‑AAG‑TCATCAGCACGCCAACGTAAATCAGCGCA‑CCAGC‑TG‑C‑AGCGTAGCCT‑GGCA‑CCATCCCCGCCAGCGGCG‑ACAGAAAGATAACCAGCAGGAACAGCAGACCAACAAC‑CACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGaa < 2:25483/234‑1 (MQ=255) ggaaatcgtaaCGGCCT‑CACCACGCGGTTAATAAACCCGGGACAAAATTCGGTACGACCCTGCCA‑GTCCAGGCGTGCCAGGCGGG‑AAG‑TTACCAGCACCCCAACGAAAAACGGGCCC‑CAAGC‑TG‑A‑AGCGTGGCCT‑GCCA‑CCACCCCCGCCAGCGGCG‑ACAGAAAGATAACCAGCAGGAACAGCAGACCAACAAC‑CACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAaga < 1:379072/230‑1 (MQ=255) gagaAGCTGAACGGCAC‑CATCACGGCGGTAATAACCGCCGGAACAGATTCAGAAAGATCCGGCCA‑GTTCACGCGTGCCAGACTGG‑AAG‑TCATCAGCCCGCCAACGTAAATCAGCGCC‑CCAGC‑TG‑C‑AGCGTAGCCG‑GGCA‑CCACCCCCGCCAGCGGCG‑ACAGAAAGATAACCAGCAGGAACAGCAGACCAACAAC‑CACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAaga < 2:586843/239‑1 (MQ=255) aGCGGAACGGCAT‑CATCAGGGCGGTAATAAACGCCGGAACAGATTCAGTAAGATCCTGCCA‑GTCCACGCGTGCCAGACTGG‑AAG‑TCATCAGCACGCCAACGTAAATCAGCGCA‑CCAGC‑TG‑C‑AGCGTAGCCT‑GGCA‑CCATCCCCGCCAGCGGCG‑ACAGAAAGATAACCAGCAGGAACAGCAGACCAACAAC‑CACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGa < 2:141818/238‑1 (MQ=255) tcTGAACGGCAA‑CACCACGGGGTTAAAAAACCCCGGAAAAGCGTCAGAAAGCTCCTGCCA‑GTTCACGCGTGCCAGACTGG‑AAG‑TCATCAGCCCGCCAACGGAAATCAGCGCA‑CCAGC‑TG‑A‑AGCGTGGCCG‑GGCC‑CCACCCCCGCCAGCGGCG‑ACAGAAAGATAACCAGCAGGAACAGCAGACCAACAAC‑CACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACt < 1:177540/238‑1 (MQ=255) cgtaaccgccaacctcccggcgaGAATAAACCCCGGAACAGATTCAGAAAGACCCCGCCA‑GTCCACGCGTGCCAGACTGA‑AAG‑CCACCACCACGCCACCGTAAATCGGCGAC‑CCAGC‑TG‑C‑AGCGTGGCCG‑GGCC‑CAATCCCCGCCAGCGGCG‑ACAGAAAGATAACCAGCAGGAACAGCAGACCAACAAC‑CACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACt < 1:590289/222‑1 (MQ=255) tgaacggcctcccacggggggTAAAAAACGGCGAAACAGATTCAAAAAACCCCGGCCG‑TTCCACGCGTGCAAGACGGG‑AAG‑TCATCCGCCCCCCAACGTAAAACGGCGCA‑CCAGC‑GG‑C‑AGCGTGGCCG‑GGCC‑CCACCCCCGCCAGCGGCG‑ACAGAAAGATAACCAGCAGGAACAGCAGACCAACAAC‑CACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTc < 1:27336/219‑1 (MQ=255) gTAAAAAACCCCGGAACAGTTTCAGGAAGACCCTGCCA‑GTCCACGGGTGCCAGACGGG‑AAG‑TCATCAGCACGCCAACGTAAATCAGCGCA‑CCAGC‑TG‑C‑AGCGTAGCCT‑GGCA‑CCATCCCCGCCAGCGGCG‑ACAGAAAGATAACCAGCAGGAACAGCAGACCAACAAC‑CACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGgaag < 2:756073/238‑1 (MQ=255) aataaACGCCGGAACAAATTAAGAAAGCCCCCACCA‑GTCCCCGCGTGCCAGGCTGG‑AAG‑TCCCCAGCCCCCCAAGGGAAACCACGCCA‑CCAGC‑GG‑C‑AGCTTGGCCG‑GGCC‑CCACCCCCGCCAGCGGCG‑ACAGAAAGATAACCAGCAGGAACAGCAGACCAACAAC‑CACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGaagaag < 1:221780/239‑1 (MQ=255) acgcccGGAACAGATTCAGTAAGATCCGGCAA‑GTCCACGCGTGCCAGACTGG‑AAG‑TCATCAGCCCGCAAACGTAAATCAGCGCA‑CCAGC‑TG‑C‑AGCGTAGCCT‑GGCA‑CCACCCCCGCCAGCGGCG‑ACAGAAAGATAACCAGCAGGAACAGCAGACCAACAAC‑CACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTAcc < 2:23932/235‑1 (MQ=255) ccGGAACAGATTCAGTAAGATCCTGCCA‑GTTCACGCGTGCCAGACTGG‑AAG‑TCATCAGCACGCCAACGTAAATCAGCGCA‑CCAGC‑TG‑C‑AGCGTAGCCT‑GGCA‑CCATCCCCGCCAGCGGCG‑ACAGAAAGATAACCAGCAGGAACAGCAGACCAACAAC‑CACTGCCGTCAGACAGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGGTa > 2:145355/1‑239 (MQ=255) cGGAACAGATTCAGTAAGATCCTGCCA‑GTTCACGCGTGCCCGACTGG‑AAG‑TCATCAGCACGCCAACGTAAATCAGCGCA‑CCAGC‑TG‑C‑AGCGTAGCCT‑GGCA‑CCATCCCCGCCAGCGGCG‑ACAGAAAGATAACCAGCAGGAACAGCAGACCAACAAC‑CACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATTTAAGCCCTAACGTGAGAAGTACCGATaa > 2:258089/1‑239 (MQ=255) aTTCAGTAAGCTCCTGCAA‑GTTCACGCGTGCCAGCCTGG‑AAG‑TCCTCAGCACCCCAACGTAAATCAGCGCC‑CCAGC‑TG‑C‑AGCGTAGCCT‑GGCA‑CCATCCCCGCCAGCGGCG‑ACAGAAAGATaa < 1:105009/123‑1 (MQ=255) aTTCAGTAAGATCCTGCCA‑GTTCACGCGTGCCAGACTGG‑AAG‑TCATCAGCACGCCCACGTAAATCAGCGCA‑CCAGC‑TG‑C‑AGCGCAGCCT‑GGCC‑CCATCCCCGCCAGCGGCG‑ACAGAAAGATAACCAGCAGGAACAGCAGACCAAACAC‑CACGCCCGTCAAACCGGTACACACACCACCCGCAGCGCCCCACAATGACCCACTATAACCCGTCACGgaagaaacacacaaaaacaaaaag > 1:381462/1‑221 (MQ=255) tccAGTAAGATCCGGCCA‑GTCCACGCTGGCCAGACTGG‑AAG‑TCAACAGCCCGCAAACGTAAATCAGCGCA‑CCAGC‑TG‑C‑AGCGTAGCCT‑GGCA‑CCATCCCCGCCAGCGGCG‑ACAGAAAGATAACCAGCAGGAACAGCAGACCAACAAC‑CACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGaa < 2:289807/233‑1 (MQ=255) agagaagtCCTGCCA‑TTTCCCCGGCGCCAACCTGG‑ACG‑TGAGCAGCGCGCAAACGAAAAGCAGCGCA‑CCGGC‑TG‑C‑GGCGTAGCAT‑GCCA‑CCATCCCCGACAGCGGCG‑ACAGAAAGATAACCAGCAGGAACAGCAGACCAACAAC‑CGCTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTCCCGATAAACGAACCGGTCa < 1:139392/232‑1 (MQ=255) gTAAGATCCTGCCA‑GTTCACGCGTGCCAGACTGG‑AAG‑TCATCAGCACGCCAACGTAAATCAGCGCA‑CCAGC‑TG‑C‑AGCGTAGCCT‑GGCA‑CCATCCCCGCCAGCGGCG‑ACAGAAAGATAACCAGCAGGAACAGCAGACCAACAAC‑CACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCAc > 2:28921/1‑239 (MQ=255) aaGCTCCTGCCA‑GTTCACGGGGGCCAGCCTGG‑AAG‑TCATCAGCACGCCAACGTAAACGAGCGCC‑CCAGC‑TG‑C‑AGCGAAGCCT‑GGCA‑CCATCCCCGCCAGCGGCG‑ACAGAAAGATAACCAGCAGGAACAGCAGACCAACAAC‑CACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCAc < 2:784166/237‑1 (MQ=255) aaaacgtcccccattCACGCGTGGCAGACAGGAAAG‑CCACACCCCCGCAACCGTAAATCAGCCCA‑CCACG‑GG‑G‑AGCGTACCCG‑GGCC‑CCACCCCCGCCAGCGGCG‑ACAGAAAGATAACCAGCAGGAACAGCAGACCAACAAC‑CCCTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCAc < 1:618402/225‑1 (MQ=255) ataccccgcaaggtCACGCGTGCCAGACGGG‑AAG‑CCATCGACAGCCCAACGTAAACCAGCACT‑ACAGC‑TG‑C‑AGCGAAGCCT‑GGCA‑CCATCCCCGACAGCGGCG‑ACAGAAAGATAACCAGCAGGAACAGCAGACCAACAAC‑CACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGa < 2:162623/226‑1 (MQ=255) aTCCTGCCA‑GTTCACGCGTGCCAGACTGG‑AAG‑TCATCAGCACGCCAACGTAAATCAGCGCA‑CCAGC‑TG‑C‑AGCGTAGCCT‑GGCA‑CCATCCCCGCCAGCGGCG‑ACAGAAAGATAACCAGCAGGaa > 2:105009/1‑123 (MQ=255) aTCCTGCCA‑GTTCACGCGTGCCAGACTGG‑AAG‑TCATCAGCACGCCAACGTAAATCAGCGCA‑CCAGC‑TG‑C‑AGCGTAGCCT‑GGCA‑CCATCCCCGCCAGCGGCG‑ACAGAAAGATAACCAGCAGGAACAGCAGACCAACAAC‑CACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGgaag < 2:781965/209‑1 (MQ=255) aTCCTGCCA‑GTTCACGCGTGCCAGACTGG‑AAG‑TCATCAGCACGCCAACGTAAATCAGCGCA‑CCAGC‑TG‑C‑AGCGTAGCCT‑GGCA‑CCATCCCCGCCAGCGGCG‑ACAGAAAGATAACCAGCAGGAACAGCAGACCAACAAC‑CACTGCCGTCAGACCGGTACGACCGCCAACCAATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGCAGAACCCGTAAACGAACCGGTCACGGAag > 2:120465/1‑239 (MQ=255) tCCTGCCA‑GTTCACGCGTGCCAGACTGG‑AAG‑TCATCAGCACGCCAACGTAAATCAGCGCA‑CCAGC‑TG‑C‑AGCGTAGCCT‑GGCA‑CCATCCCCGCCAGCGGCG‑ACAGAAAGCTAACCAGCAGGAACAGCAGACCAACAAC‑CACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAAAGAACTCAAAATAAGCCGTAACGGAAGAAGTACCGCTAAAGGAACCGGTCACGGagaa > 2:187923/1‑236 (MQ=255) ccgcccA‑GTTCACGCGTGCCAGACGGG‑AAG‑TCCTCAGCCCGCCAACGTAAATCAGCGCA‑CCAGC‑TG‑C‑AGCGTAGCCT‑GGCC‑CCATCCCCGCCAGCGGCG‑ACAGAAAGATAACCAGCAGGAACAGCAGACCAACAAC‑CACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAagag < 2:503903/235‑1 (MQ=255) tGCCA‑GTTCACGCGTGCCAGACTGG‑AAG‑TCATCAGCACGCCAACGTAAATCAGCGCA‑CCAGC‑TG‑C‑AGCGTAGCCT‑GGCA‑CCATCCCCGCCAGCGGCG‑ACAGAAAGATAACCAGCAGGAACAGCAGACCAACAAC‑CACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGACCCGGCCACGGAAGAGAt > 2:344723/1‑239 (MQ=255) tGCCA‑GTTCACGCGTGCCAGACTGG‑AAG‑TCATCAGCACGCCAACGTAAATCAGCGCA‑CCAGC‑TG‑C‑AGCGTAGCCT‑GGCA‑CCATCCCCGCCAGCGGCG‑ACAGAAAGATAACCAGCAGGAACAGCAGACCAACAAC‑CACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAAAGAt > 2:175317/1‑239 (MQ=255) tGCCA‑GTTAACGCGTGCCAGACTGG‑AAG‑TCATCAGCACGCCAACGTAAATCAGCGCA‑CCAGC‑TG‑C‑AGCGTAGCCT‑GGCA‑CCATCACCGCCAGCGGCG‑ACATAAAGATAACCAGCAGGAACAGCAGCCCAACAAC‑CCCTGCCGTCAGACAGGTAACACCGCCAACCTGTAAGCCTGCAGAGGCCTCAATATAAACCGCAACGGAAGAAGCAACGATAAACGAACCGGGCACGGaaacaca > 1:698140/1‑234 (MQ=255) ccA‑GTTCCCGCGGGCCAGACTGG‑AAG‑TCATGAGCACGCCAACGTAAACCAGCGCA‑CCAGG‑TG‑C‑AGCGTAGCCT‑GGCA‑CCATCCCCGCCAGCGGCG‑ACAGAAAGATAACCAGCAGGAACAGCAGACCAACAAC‑CACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATAc < 2:485427/239‑1 (MQ=255) ttCACGCGTGCCAGACTGG‑AAG‑TCATCAGCACGCCAACGTAAATCAGCGCA‑CCAGC‑TG‑C‑AGCGTAGCCT‑GGCA‑CCATCCCCGCCAGCGGCG‑ACAGAAAGATAACCAGCAGGAACAGCAGACCAACAAC‑CACTGCCGTCAGACCGGTACGACCg > 1:140170/1‑153 (MQ=255) ttCACGCGTGCAAGACTGG‑AAG‑TCATCAGCACGCCAACGTAAATCAGCGCA‑CCAGC‑TG‑C‑AGCGTAGCCT‑GGCA‑CCATCCCCGCCAGCGGCG‑ACAGAAAGATAACCAGCAGGAACAGCAGACCAACAAC‑CACTGCCGTCAGACCGGTACGACCg < 2:140170/153‑1 (MQ=255) tcccggttGCCAGACTGG‑AAG‑TCACCGGCACGCAACCGTAAATCAGGGCA‑CCAGC‑TG‑C‑AGCGTAGCCT‑GGCA‑CCACCCCCGCCAGCGGCG‑ACAGAAAGATAACCAGCAGGAACAGCAGACCAACAAC‑CACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCg < 2:211445/232‑1 (MQ=255) ccgcgcgTGCCAGTCTGG‑ATG‑TCACCAGCCCCAAAACGTAAATCAGCGCA‑CCAGC‑TG‑C‑AGGGAAGCGT‑GGCA‑CAACCCCCGCCAGCGGCG‑ACAGAAAGATAACCAGCAGGAACAGCAGACCAACAAC‑CACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTg < 2:393705/233‑1 (MQ=255) ccAGACTGG‑AAG‑TCATCAGCACGCCAACGTAAATCAGCGCA‑CCAGC‑TG‑C‑AGCGTAGCCT‑GGCA‑CCATCCCCGCCAGCGGCG‑ACAGAAAGATAACCAGCAGGAACAGCAGACCAACAAC‑CACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCCCGGAAGGGAAACTGTCgcacaacag > 2:337856/1‑230 (MQ=255) atcaGCACGCCAACGTAAATCAGCGCA‑CCAGC‑TG‑C‑AGCGTAGCCT‑GGCA‑CCATCCCCGCCAGCGGCG‑ACAGAAAGATAACCAGCAGGAACAGCAGACCAACCAC‑CACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGCGGACTCAATATAAACCGTACCGGAAGAAATACCGAAAAACAAACCGGTCACGGAACAGACACAGTAAACAAACAgaacacgcctcaagcg > 1:395073/1‑224 (MQ=255) gCACGCCAACGTAAATCAGCGCA‑CCAGC‑TG‑C‑AGCGTAGCCT‑GGCA‑CCATCCCCGCCAGCGGCG‑ACAGAAAGATAACCAGCAGGAACAGCAGACCAACAAC‑CACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTTCATGCGC‑ggg > 2:596341/1‑239 (MQ=255) cACGACAACGTAAATGAGCCCC‑CCAGC‑AG‑C‑AGGCTAGCC‑‑GGCACCCACCCCCGCCAGCGGCG‑ACAGAAAGATAACCAGCAGGAACAGCAGACCAACAAC‑CACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTTCATGCGC‑GGGa < 2:12028/239‑1 (MQ=255) cAACGTAAATCAGCGCA‑CCAGC‑TG‑C‑AGCGTAGCCT‑GGCA‑CCATCCCCGCCAGCGGCG‑ACAGAAAGATAACCAGCAGGAACCGCAGACCAACAAC‑CACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCACTCTAAGCCGTAACGGAAGAAGTACCGCTAAACGAACCGGTCACGGACGAGATACTGTCGCCATACAACGCCTGCTTCATCCCC‑GGGAAttt > 2:96015/1‑238 (MQ=255) aTCAGCGCA‑CCAGC‑TG‑C‑AGCGTAGCCT‑GGCA‑CCATCCCCGCCAGCGGCG‑ACAGAAAGATAACCAGCAGGAACAGCAGACCAACAAC‑CACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGCTAAACGAACCGGTCACGGAAGAGATACTGTCGCCATACAGCGCCTGCTTCATGCGC‑GGGAATTTCCCCTtctc > 2:885110/1‑239 (MQ=255) aTCAGCGCA‑CCAGC‑TG‑C‑AGCGTAGCCT‑GGCA‑CCATCCCCGCCAGCGGCG‑ACAGAAAGATAACCAGCAGGAACAGCAGACCAACAAC‑CACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGCCGACATACAGCGCCTCCTTCATGCGC‑GGGAATTTCCACTcct > 2:689137/1‑238 (MQ=255) gcgcA‑CCAGC‑TG‑C‑AGCGTAGCCT‑GGCA‑CCATCCCCGCCAGCGGCG‑ACAGAAAGATAACCAGCAGGAACAGCAGACCAACAAC‑CACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGCTAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCCGCTTCAAGCGC‑GGGAAATTCCCCTTCCCaac > 1:272930/1‑236 (MQ=255) cgcA‑CCAGC‑TG‑C‑AGCGTAGCCT‑GGCA‑CCATCCCCGCCAGCGGCG‑ACAGAAAGATAACCAGCAGGAACAGCAGACCAACAAC‑CACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTTCATGCGC‑GGGAATTTCCCCTTCTCATcc > 2:514246/1‑238 (MQ=255) cgcA‑CAAGC‑TG‑C‑AGCGTAGCCT‑GGCA‑CCATCCCCGCCAGCGGCG‑ACAGAAAGATAACCATCAGGAACAGCAGACCACCAAC‑CACTGCCGACAGACCGGTACGACCGCCAACCGCAACGCCGGCAGAGGCCCCACTATAAGCCGGACAGGAAGAACTCCCGACACACGACCCGGCCACGGAAGGAACCCTTGCGCCATACAACGCCCGCTCCCTTCGC‑GGGCATTTCCCCCTCCCAAcc > 1:772742/1‑238 (MQ=255) gcA‑CCAGC‑TG‑C‑AGCGTAGCCT‑GGCA‑CCATCCCCGCCAGCGGCG‑ACAGAAAGATAACCAGCAGGAACAGCAGACCAACAAC‑CACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGCAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGCCACGGCAGAGATACTGTAGACAAACAACGCCTGCTTCAT‑CGCGGGGAATTTCCCCTCCCCACCCGc > 1:688555/1‑239 (MQ=255) gcA‑CCAGC‑TG‑C‑AGCGTAGCCT‑GGCA‑CCATCCCCGCCAGCGGCG‑ACAGAAAGATAACCAGCAGGAACAGCAGACCAACAAC‑CACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAAAGATACTGTCGACATACAGCGCCTGCTTCATCCCC‑GGGAATTTCCCCTTCCCATccc > 1:48077/1‑237 (MQ=255) gcA‑CCAG‑‑TG‑CAAGCGTAGCCT‑GGCA‑CCACCCCCGCCAGCGGCG‑ACAGAAAGATAACCAGCAGGAACAGCAGACCAACAAC‑CACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTTCATGCGC‑GGGAATTTCCCCTTCTCATCCGc < 2:641166/239‑1 (MQ=255) | ATCTTCAGGATAAACAGCAGCGCAACGATGATTACGCACGGGCTTAGATCACGCAGACGTCCGGTACCGATTTTCATCACGCAGTAGGAGATAAAGCCCAGCGCGATACCTTCGGTAATCGAGAAGCTGAACGGCAT‑CATCACGGCGGTAATAAACGCCGGAACAGATTCAGTAAGATCCTGCCA‑GTTCACGCGTGCCAGACTGG‑AAG‑TCATCAGCACGCCAACGTAAATCAGCGCA‑CCAGC‑TG‑C‑AGCGTAGCCT‑GGCA‑CCATCCCCGCCAGCGGCG‑ACAGAAAGATAACCAGCAGGAACAGCAGACCAACAAC‑CACTGCCGTCAGACCGGTACGACCGCCAACCGATACGCCGGAAGAGGACTCAATATAAGCCGTAACGGAAGAAGTACCGATAAACGAACCGGTCACGGAAGAGATACTGTCGACATACAGCGCCTGCTTCATGCGC‑GGGAATTTCCCCTTCTCATCCGC > NC_000913/3895293‑3895765 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |