Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_000913 | 266,024 | A→G | 14.3% | S22P (TCT→CCT) | ykfB ← | CP4‑6 prophage, uncharacterized protein |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 266,024 | 0 | A | G | 14.3% | 169.4 / 2.1 | 74 | S22P (TCT→CCT) | ykfB | CP4‑6 prophage, uncharacterized protein |
Reads supporting (aligned to +/- strand): ref base A (52/9); new base G (2/10); total (55/19) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 7.41e-06 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
CTGGACGGAATAATGTACTGCTGGTGATCCATCACTACGGTGATAGTAGTGTCGTCATCGTGCGAACTGACCATCTTGTCATCGGCAA‑GGGTAAGAAAGACTGAATGCTGATAGAAACCATTCTGGTCCGGGTTCCCTGTGCAGTTGAT‑GGTAAAC‑GTCTTTCCGCTGGCTTCGGT‑CACGCTGT‑ATTCCGTATTGCCCTGACCGTAACCCTG‑CTGCCAGAACCCCGG‑G‑ATAGCAGAGGCATT‑AAAGCTCGC‑GAGCAGTACACCCGCCAGCATAAACCGACTTAGTGAAAGTATTGTCATTCTTGTCTCCTTTGTCGTTGTTTTATTCCTGATTGTCAGGGTTCGAGGGTATCAGTAGCTGCCCCATCAGTTTGCCGTCATGGGCGTACTCAAAGTATTTTTCTTTGGTATACGGGTCCGTCACCTCCTGGTATTCCAGTTTGATGTTATCGGCAATACACAGCG > NC_000913/265789‑266252 | ccggACGGAATTATGTACTGCTGGTGATCCATCACTACGGTTATAGTAGTGTCGTCATCGTGCGAACTGACCATCTTGTCATCGGCAA‑GGGTAAGAAAGACTGAATGCTGATAGAAACCATTCTGGTCCGGGTTCCCTGTGCAGTTGAT‑GGTAAAC‑GTCTTTCCGCTGGCTTCGGT‑CACGCTGT‑ATTCCGTATTGCCCTGACCGTAACCCTG‑CTGCCAGAACCCCGG‑G‑ATAGCaga < 2:132508/234‑1 (MQ=255) gACGGAATAATGTACTGCTGGTGATCCATCACTACGGTGATAGTAGTGTCGTCATCGTGCGAACTGACCATCTTGTCATCGGCAA‑GGGTAAGAAAGACTGAATGCTGATAGAAACCATTCTGGTCCGGGTTCCCTGTGCAGTTGAT‑GGTAAAC‑GTCTTTCCGCTGGCTTCGGT‑CACGCTGT‑ATTCCGTATTTCCCTGACCGTAACCCTG‑CTGCCAGAACCCCGG‑G‑AAAGAAGGGGCAtt > 1:402871/1‑239 (MQ=255) tgctgcTGATCCATCACTATGGAGATCGTAGTATCGTCATCGTGCGAACTGACCATCTTGTCATCGGCAA‑GGGTAAGAAAGACTGAATGCTGATAGACACCATTCTGGTCCGTGTTCCCTGTGCAGCTGAT‑GGTAAAC‑GTCTTTCCGCTGGCTTCGGT‑CACGCTGT‑ATTCTGTATTGCCCTGACCGTAACCCTG‑CTGCCAGAACCCCGG‑G‑ATAGACGAGGCCTA‑AAAGCTCGC‑GAGcct > 1:25106/1‑237 (MQ=255) tgctgGTGATCCATCACTACGGTGATAGTAGTGTCGTCATCGTGCGAACTGACCATCTTGTCATCGGCAA‑GGGTAAGAAAGACTGAATGCTGATAGAAACCATTCTGGTCCGGGTTCCCTGTGCAGTTGAT‑GGTAAAC‑GTCTTTCCGCTGGCTTCGGT‑CACGCTGT‑ATTCCGTATTGCCCTGACCGTAACCCTG‑CTGCCAGAACCCCGG‑G‑CTAGCAGAGGCATT‑AAAGCTCGC‑GAGCAg > 2:24552/1‑239 (MQ=255) tgctgGTGATCCATCACTACGGTGATAGTAGTGTCGTCATCGTGCGAACTGACCATCTTGTCATCGGCAA‑GGGTAAGAAAGACTGAATGCTGATAGAAACCATTCTGGTCCGGGTTCCCTGTGCAGTTGAT‑GGTAAAC‑GTCTTTCCGCTGGCTTCGGT‑CACGCTGT‑ATTCCGTATTGCCCTGACCGTAACCCTG‑CTGCCAGAACCCCGG‑G‑ATAGCAGAGGCATT‑AAAGCTCGC‑GGGCAg > 2:8889/1‑239 (MQ=255) tgctgGTGATCCATCACTACGGTGATAGTAGTGTCGTCATCGTGCGAACTGACCATCTTGTCATCGGCAA‑GGGTAAGAAAGACTGAATGCTGATAGAAACCATTCTGGTCCGGGTTCCCTGTGCAGTTGAT‑GGTAAAC‑GTCTTTCCGCTGGCTTCGGT‑CACGCTGT‑ATTCCGTATTGCCCTGACCGTAACCCTG‑CTGCCAGAACCCCGG‑G‑ATAGCAGAGGCATT‑AAAGCTCGC‑GGGCAg > 2:244637/1‑239 (MQ=255) tgctgGTGATCCATCACTACGGTGATAGTAGTGTCGTCATCGTGCGAACTGACCATCTTGTCATCGGCAA‑GGGTAAGAAAGACTGAATGCTGATAGAAACCATTCTGGTCCGGGTTCCCTGTGCAGTTGAT‑GGTAAAC‑GTCTTTCCGCTGGCTTCGGT‑CACGCTGT‑ATTCCGTATTGCCCTGACCGTAACCCTG‑CTGCCAGAACCCCGG‑G‑ATAGCAGAGGCATT‑AAAGCTCGC‑GAGCAg > 2:195975/1‑239 (MQ=255) tgctgGTGATCCATCACTACGGTGATAGTAGTGTCGTCATCGTGCGAACTGACCATCTTGTCATCGGCAA‑GGGTAAGAAAGACTGAATGCTGATAGAAACCATTCTGGTCCGGGTTCCCTGTGCAGTTGAT‑GGTAAAC‑GTCTTTCCGCTGGCTTCGGT‑CACGCTGT‑ATTCCGTATTGCCCTGACCGTAACCCTG‑CTGCCAGAACCCCGG‑G‑ATAGCAGAGGCATT‑AAAGCTCGC‑GAGCAg > 2:388745/1‑239 (MQ=255) tgctgGTGATCCATCACTACGGTGATAGTAGTGTCGTCATCGTGCGAACTGACCATCTTGTCATCGGCAA‑GGGTAAGAAAGACTGAATGCTGATAGAAACCATTCTGGTCCGGGTTCCCTGTGCAGTTGAT‑GGTAAAC‑GTCTTTCCGCTGGCTTCGGT‑CACGCTGT‑ATTCCGTATTGCCCTGACCGTAACCCTG‑CTGCCAGAACCCCGG‑G‑ATAGCAGAGGCATT‑AAAGCTCGC‑GAGCAg > 2:620801/1‑239 (MQ=255) tgctgGTGATCCATCACTACGGTGATAGTAGTGTCGTCATCGTGCGAACTGACCATCTTGTCATCGGCAA‑GGGTAAGAAAGACTGAATGCTGATAGAAACCATTCTGGTCCGGGTTCCCTGTGCAGTTGAT‑GGTAAAC‑GTCTTTCCGCTGGCTTCGGT‑CACGCTGT‑ATTCCGTATTGCCCTGACCGTAACCCTG‑CTGCCAGAACCCCGG‑G‑ATAGCAAAGGCATT‑AAAGCTCCC‑GAGCAg > 2:726321/1‑239 (MQ=255) tgctgGTGATCCATCACTACGGTGATAGTAGTGTCGTCATCGTGCGAACTGACCATCTTGTCATCGGCAA‑GGGTAAGAAAGACTGAATGCTGATAGAAACCATTCTGGTCCGGGTTCCCTGTGCAGTTGAT‑GGTAAAC‑GTCTTTCCGCTGGATTCGGT‑CACGCTGT‑ATTCCGTATTGCCCTGACCGTAACCCTG‑CTGCCAGAACCCCCG‑G‑ATAGCAGAGGCATT‑AAAGCTCGC‑GAGCAg > 2:406060/1‑239 (MQ=255) tgctgGTGATCCATCACTACGGTGATAGTAGTGTCGTCATCGTGCGAACTGACCATCTTGTCATCGGCAA‑GGGTAAGAAAGACTGAATGCTGATAGAAACCATTCTGGTCCGGGTTCCCTGTGCAGTTGAT‑GGGAAAC‑GTCTTTCCGCTGGCTTCGGT‑CACGCTGT‑ATTCCGTATTGCCCTGACCGTAACCCTG‑CTGCCAGAACCCCGG‑G‑ATAGCAGAGGCATT‑AAAACTACC‑GAGCAg > 1:839202/1‑239 (MQ=255) tgctgGTGATCCATCACTACGGTGATAGTAGTGTCGTCATCGTGCGAACTGACCATCTTGTCATCGGCAA‑GGGTAAGAAAGACTGAATGCTGATAGAAACCATTCTGGTCCGGGTTCCCTGTGCAGTTGAT‑GGCAAAC‑GTCTTTCCGCTGGCTTCGGT‑CACGCTGT‑ATTCCGTATTGCCCTGCCCGTAACCCTG‑CTGCCACAACCCCGG‑G‑ATACCAGGGGACTA‑AAAGCtaccaacccg > 1:108011/1‑230 (MQ=255) tgctgGCGATCCATCACTACGGTGATAGTAGTGTCGTCATCGTGCGAACTGACCATCTTGTCATCGGCAA‑GGGTAAGAAAGACTGAATGCTGATAGAAACCATTCTGGTCCGGGTTCCCTGTGCAGTTGAT‑GGTAAAC‑GTCTTTCCGCTGGCTTCGGT‑CACGCTGT‑ATTCCGTATTGCCCGGACCGTAACCCTG‑CTGCCAGAACCCCGG‑G‑ACAGCAATGGAATT‑AAAGCTCCC‑GAGccg > 1:91587/1‑237 (MQ=255) gTGATCCATCACTACGGTGATAGTAGTGTCGTCATCGTGCGAACTGACCATCTTGTCATCGGCAA‑GGGTAAGAAAGACTGAATGCTGATAGAAACCATTCTGGTCCGGGTTCCCTGTGCAGTTGAT‑GGTAAAC‑GTCTTTCCGCTGGCTTCGGT‑CACGCTGT‑ATTCCGTATTGCCCTGCCCGTAACCCTG‑CTGCCAGAACCCCGG‑G‑ATAGCAGAGGCATT‑AAAGCCCCC‑GAGCAGAaca > 1:4540/1‑238 (MQ=255) gTGATCCATCACTACGGTGATAGTAGTGTCGTCATCGTGCGAACTGACCATCTTGTCATCGGCAA‑GGGTAAGAAAGACTGAATGCTGATAGAAACCATTCTGGTCCGGGTTCCCTGAGCAGTTGAT‑GGTAAAC‑GTCTTTCCGCTGTCTTCGGT‑CACGCTGT‑ATTCCGTATTGCCCGGACCTTAACCCTG‑CTGCCAGAACCCCGG‑G‑ATAGCACAGGCATT‑AAAgtcagcggaaggaaaa > 1:785261/1‑223 (MQ=255) ccATCACTACGGTGATAGTAGTGTCGTCATCGTGCGAACTGACCATCTTGTCATCGGCAAGGGGTAAGAAAGACTGAATGCTGATAGAAACCATTCTGGTCCGGGTTCCCTGTGCAGTTGAT‑GGTAAAC‑GTCTTTCCGCTGGCTTCGGT‑CACGCTGT‑ATTCCGTATTGCCCTGACCGTAACCCTG‑CTGCCAGAACCCCGG‑G‑ATAGCAGAGGCATT‑AAAGCTCGC‑GGGCAGTACACCCg > 2:182252/1‑238 (MQ=255) aTCACTACGGTGATAGTAGTGTCGTCATCGTGCGAACTGACCATCTTGTCATCGGCAA‑GGGTAAGAAAGACTGAATGCTTATACAAACCATTCTGGACCGGGTTGCCTGTGCAGTTGAT‑GGTAAAC‑ATCTTTCCGCTGGCTTCGGT‑CACCGTGC‑ATTCCGTATTGCCCTAGCCCTAGCCCTC‑CTCCCCGCACCCCGG‑G‑ATAGTAAAGGTAAT‑AAAGccacgggccatgaaacccgcccc > 1:383220/1‑217 (MQ=25) ggTGATAGTAGTGTCGTCATCGTGCGAACTGACCATCTTGTCATCGGCAA‑GGGTAAGAAAGACTGAATGCTGATAGAAACCATTCTGGTCCGGGTTCCCTGTGCAGTTGAT‑GGTAAAC‑GTCTTTCCGCTGGCTTCGGT‑CACGCTGT‑ATTCCGTATTGCCCTGACCGTAACCCTG‑CTGCCAGAACCCCGG‑G‑ATAGCAGAGGCATT‑AAAGCTCGC‑GAGCAGTACACCCGCCAGCATAAAcc > 2:624975/1‑239 (MQ=255) gtagtGTCGTCATCGTGCGAACTGACCATCTTGTCATCGGCAA‑GGGTAAGAAAGACTGAATGCTGATAGAAACCATTCTGGTCCGGGTTCCCTGTGCAGTTGAT‑GGTAAAC‑GTCTTTCCGCTGGCTTCGGT‑CACGCTGT‑ATTCCGTATTGCCCTGACCGTAACCCTG‑CTGCCAGAACCCCGG‑G‑ATAGCAGAGGCATT‑AAAGCTCGC‑GAGCAGTACACCCGCCAGCATAAACCGACTTAg > 2:154055/1‑239 (MQ=255) gtgtCGTCATCGTGCGAACTGACCATCTTGTCATCGGCAA‑GGGTAAGAAAGACTGAATGCTGATAGAAACCATTCTGGTCCGGGTTCCCTGTGCAGTTGAT‑GGTAAAC‑GTCTTTCCGCTGGCTTCGGT‑CACGCTGT‑ATTCCGTATTGCCCTGACCGTAACCCTG‑CTGCCAGAACCCCGG‑G‑ATAGCAGAGGCATT‑AAAGCTCGC‑GGGCAGTACACCCGCCAGCATAAACCGACTTAGGGa > 2:114714/1‑239 (MQ=255) tgtCGTCATCGTCGGAACTGACCACTTGGTCACGGGCAA‑GGGTAAGAAAGACTGAAGCCTGATAGAACCCATTCTGGTCCGGGTTCCCTGTGCAGTTAAT‑GGTAAAC‑GTCTTCCCGCTGGCTTCGGT‑CACGCTGT‑AGTCCGTATTCCCCTGACCGTAACCCTG‑CTGCCAGAACCCCGG‑G‑ATAGCAGAGGCATT‑AAAGCTCGC‑GAGCAGTACCCCCGCCAGCATAAACCGACTTAGTGa < 2:165725/238‑1 (MQ=255) tcgtcCTCGTGCGAACTTCCCAGTTTGCCAGCGGCAA‑TGGTAAGAAAGACTTAATGTTGATAGAAACCATTCGGGTCCGGGTTCCCTGTGCAGTTGAT‑GGTAAAC‑GTCTTCCCGGTGGCTGCGGT‑CACGCTGT‑ATTCCGTATTGCCCTAACCGTACCCCTG‑CTGCCAGACCCCCGG‑G‑ATAGCAGAGGCATT‑AAACCTCGC‑GAGCAGTACACCCGCCAGCATAAACCGACTTAGTGAAAg < 1:381617/239‑1 (MQ=255) tcATCGTGCGAACTGACCATCTTGTCATCGGCAA‑GGGTAAGAAAGACTGAATGCTGATAGAAACCATTCTGGTCCGGGTTCCCTGTGCAGTTGAT‑GGTAAAC‑GTCTTTCCGCTGGCTTCGGT‑CACGCTGT‑ATTCCGTATTGCCCTGCCCGTAACCCTG‑CTGCCAGAACCCCGG‑G‑ATAGCAGAGGCATT‑AAAGCTCGC‑GAGCAGTACACCCCCCAGCCTAACCCGACTAAGGGaaaaaat > 1:818098/1‑235 (MQ=255) aTCGAGCGAACTGACCATCTTGTCATCGGCAA‑GGGTAAGAAAGACTGAATGCTGATAGAAACCATTCTGGTCCGGGTTCCCTGTGCAGTTGAT‑GGTAAAC‑GTCTTTCCGCTGGCTTCGGT‑CACGCTGT‑ATTCCGTATTGCCCTGACCGTAACCCTC‑CTGCCAGACCCCCGG‑G‑ATAGCAGAGGCATT‑AAAGC‑CGCAGGGCAGTAAACCCGCAACAGAAAACCGACTAAGGAAAAGCAtt > 1:367393/1‑238 (MQ=255) gCGAACTGACCATCTTGTCATCGGCAA‑GGGTAAGAAAGACTGAATGCTGATAGAAACCATTCTGGTCCGGGTTCCCTGTGCAGTTGAT‑GGTAAAC‑GACTTTCCGCTGGCTTCGGT‑CACGCTGT‑ATTCCGTATTGACCGGACCGTAACCCTG‑CTGCCAGAACCCCGG‑G‑ACAGCAGAGGCATA‑AAGGCTCGC‑ACGCGGTCCACCGCCCGGAAAAAACCGGATTATAGAAAGAAtggcaat > 1:517999/1‑232 (MQ=255) cttttGTCTTGGGTAA‑GGGTAAGAAAGACTGAGTGGTGATAGAATACATGGTGGTCCGGGTT‑CCTGTGGTGGTTATAGGTAATC‑GTCTGTCCGCTGTCTGCGAT‑CCCG‑TGTAATTCCGCATGGCCATGCCCTTAGCCCTT‑CTGGCAGACCCCCGG‑A‑TTAGCGGGGCAATT‑AAGGCCCCG‑GAGCAGTAACTCCTCCAGCATAAACCGACTTAGTGAAAGTATTGTCATTCTTGTCTCCtt < 1:308939/236‑1 (MQ=255) cATCGGCAA‑GGGTAAGAAAGACTGAATGCTGATAGAAACCATTCTGGTCCGGGTTCCCTGTGCAGTTGAT‑GGTAAAC‑GTCTTTCCGCTGGCTTCGGT‑CACGCTGT‑ATTCCTTATTGCCCTGACCGTAACCCTC‑CTGCCAGAACCCCGG‑G‑ATAGCAGAGGCATT‑AAAGCTCGC‑GAGCCGTACACCCGCCAGCATAAACCGACTTCGTGAAAGTATTgcacttctgttcccccttgccgtg > 1:892881/1‑216 (MQ=255) aaaggtacgggggAAAAAAAGAGTGAGGGCTTATAAAAACCATGCTGGGCCGGGTCCCCTGTGGCTTGTAG‑GGAAAAC‑GTCTTCCCGCGGGCTGCGGT‑CACGCTGT‑ATCCCGTATTGCCCGGCCCGAACCCCGG‑CTGCAAGACCCCCGG‑G‑ATAGAAGAGGTATT‑AAAGCGCGC‑GAGCAGTCCACCCGCCAGCATAAACCGACTTAGTGAAAGTATTGTCATTCTTGTCTCCTTTGTCgt < 1:404427/229‑1 (MQ=255) aCTGAATGCTGATAGAAACCATTCTGGTCCGGGTTCCCTGTGCAGTTGAT‑GGTAAAC‑GTCTTTCCGCTGGCTTCGGT‑CACGCTGT‑ATTCCGTATTGCCCTGACCGTAACCCTG‑CTGCCAGAACCCCGG‑G‑ATAGCAGAGGCATT‑AAAGCTCGC‑GAGCAGTACACCCGCCAGCATAAACCGACTTAGTGAAAGTATTGTCATTCTTGTCTCCTTTGTCGTTGTTTTATTCCTGATTGTCAg > 2:657707/1‑239 (MQ=255) aCTGAATGCTGATAGAAACCATTCTGGTCCGGGTTCCCTGTGCAGTTGAT‑GGTAAAC‑GTCTTTCCGCTGGCTTCGGT‑CACGCTGT‑ATTCCGTATTGCCCTGACCGTAACCCTG‑CTGCCAGAACCCCGG‑G‑ATAGCAGAGGCATT‑AAAGCTCGC‑GAGCAGTACACCCGCCAGCATAAACCGACTTAGTGAAAGCATTGTCATTCTTGTCTCCTTTGTCGTTGTTTTATTc > 2:404427/1‑228 (MQ=255) aCTGAATGCTGATAGAAACCATTCTGGTCCGGGTTCCCTGTGCAGTTGAT‑GGTAAAC‑GTCTTTCCGCTGGCTTCGGT‑CACGCTGA‑ATTCCGTATTGCCCTGACCGTAACCCTG‑CTGCCAGAACCCCGG‑G‑ATAGCAGAGGCATT‑AAAACTCCC‑GAACAGTACCACCGCCAGAATAAACCGACTTAGTAAAAGGTGTGTCACTCTTGTCTCCTTTGTAGTTTGTTTTTTCCTGATGGTcgg > 1:713515/1‑237 (MQ=255) aCTGAATGCTGATAGAAACCATTCTGGTCCGGGTTCCCTGTGCAGTTGAT‑GGTAAAC‑GTCTTTCCGCTGGCTTCGGT‑AACGCTTT‑ATTCCGTATTGCCCTGACCGTAACCCTG‑CTGCCAGAACCCCGG‑G‑ATAGCAGAGGCATT‑AAAGCACGC‑GAGCAGTCCACCCGCCCGACTAAACCAACTTGGGGAAAGAATTTGAATTCTTACCCCCTTTGTCGGTGTTTTATTCCtaaatggaag > 1:389842/1‑230 (MQ=255) cTGAATGCTGATAGAAACCATTCTGGTCCGGGTTCCCTGTGCAGTTGAT‑GGTAAAC‑GTCTTTCCGCTGGCTTCGGT‑CACGCTGT‑ATTCCGTATTGCCCTGACCGTAACCCTG‑CTGCCAGAACCCCGG‑G‑ATAGCAGAGGCATT‑AAAGCTCGC‑GAGCAGTACACCCCCCAGCATAAACCGCCTTAGTGAAAGAATTGTCATTCTTGTCTCCTTTGTCGTTGTTTTATTCTTGATTGTAAgg > 1:107842/1‑239 (MQ=255) ttCTGGTCCGGGTTCCCTGTGCAGTTGAT‑GGTAAAC‑GTCTTTCCGCTGGCTTCGGT‑CACGCTGT‑ATTCCGTATTGCCCTGACCGTAACCCTG‑CTGCCAGAACCCCGG‑G‑ATAGCAGAGGCATT‑AAAGCTCGC‑GAGCAGTACACCCGCCAGCATAAACCGCCTTAGTGAAAGAATTGTCATTCTTGTCTCCTTTGTCGTTGTTTTATTCCTGATTGTCAGGGTTCGAGGGTATCCGTacc > 2:148295/1‑236 (MQ=255) ttCTGGTCCGGGTTCCCTGTGCAGTTGAT‑GGTAAAC‑GTCTTTCCGCTGGCTTCGGT‑CACGCTGT‑ATTCCGTATTGCCCTGACCGTAACCCTG‑CTGCCAGAACCCCGG‑G‑ATAGCAGAGGCATT‑AAAGCTCGC‑GAGCAGTACACCCGCCAGCATAAACCGACTTAGTGAAAGCATTGTCATTCTTGTCTCCTTTTTCGTTGTTTTATTCCTGATTGTCAGGGTTCGCGGGCATCGGTAGc > 2:767922/1‑238 (MQ=255) tCCGGGTTCCCTGTGCAGTTGAT‑GGTAAAC‑GTCTTTCCGCTGGCTTCGGT‑CACGCTGT‑ATTCCGTATTGCCCTGACCGTAACCCTG‑CTGCCAGAACCCCGG‑G‑ATAGCAGAGGCATT‑AAAGCTCGC‑GAGCAGTACACCCGCCAGCATAAACCGACTTAGTGAAAGTATTGTCATTCTTGTCTCCTTTGTCGTTGTTTTATTCCTGATTGTCAGGGTTCGCGGGTATCAGTAGCTGcccc > 2:469119/1‑238 (MQ=255) gcagtggttgctaacgttttttCCGCTGGCTTCGGC‑CACGCTGT‑ATCCCGTTTGCCCCGGCCCGTACCCCTG‑CGCCCAGAACCCCGG‑A‑ATAGCAGGGCTATA‑AAACCTCCC‑GCGCAGTACCCCCGCCAGCATAAACCGACTTAGTGAAAGTATTGTCATTCTTGTCTCCTTTGTCGTTGTTTTATTCCTGATTGTCAGGGTTCGAGGGTATCAGTAGCTGCCCCATCAGTTTGCCGTCa < 1:831860/220‑1 (MQ=255) ttGAT‑GGTAAAC‑GTCTTTCCGCTGGCTTCGGT‑CACGCTGT‑ATTCCGTATTGCCCTGACCGTAACCCTG‑CTGCCAGAACCCCGG‑G‑ATAGCAGAGGCATT‑AAAGCTCGC‑GAGCAGTACACCCGCCAGCATAAACCGACTTAGTGAAAGTATTGTCATTCTTGTCTCCTTTGTCGTTGTTTTATTCCTGATTGTCAGGGTTCGAGGGTATCAGTCGCTGCCCCATCAGTTTGCCTTCATggg > 2:831860/1‑239 (MQ=255) ttGAT‑GGTAAAC‑GTCTTTCCGCTGGCTTCGGT‑CACGCTGT‑ATTCCGTATTGCCCTGACCGTAACCCTG‑CTGCCAGAACCCCGG‑G‑ATAGCAGAGGCATT‑AAAGCTCGC‑GAGCAGTACACCCGCCAGCATAAACCGACTTAGTGAAAGTATTGTCATTCTTGTCTCCTTTGTCGTTGTTTTATTCCTGATTGTCAGGGTTCGAGGGTATCAGTAGCTTCCCCATCAGTTTGCGGTCATgcg > 2:126336/1‑237 (MQ=255) gttt‑GGTTAACGGTCTTCCCGTGGGCTGCGGC‑CACGCTTT‑TTGCCGTTTTGCCCAGCCCG‑AACCCTGTCTGCAAGACCCCCGG‑G‑ATAGCAGAGCCTTT‑AAAGCTCGC‑GAGCAGTACACCCGCCAGCATAAACCGACTTAGTGAAAGTATTGTCATTCTTGTCTCCTTTGTCGTTGTTTTATTCCTGATTGTCAGGGTTCGAGGGTATCAGTAGCTGCCCCATCAGTTTGCCGTCATggg < 1:726321/236‑1 (MQ=255) gAT‑GGAAACC‑GTTTTGCCGTTGGCTTCGGT‑CACGCTGT‑ATTCCGTATGGCCCGGACCGTAACCCTG‑CTGCCAAACCCCCGG‑G‑ATAGCAGAGGCATT‑AAAGCCCGC‑GAGCAGTACACCCGCCAGCATAAACCGACTTAGTGAAAGTATTGTCATTCTTGTCTCCTTTGTCGTTGTTTTATTCCTGATTGTCAGGGTTCGAGGGTATCAGTAGCTGCCCCATCAGTTTGCCGTCATGGGCg < 2:402871/239‑1 (MQ=255) tttgtaaccgttttCCCGTGGCCTTGGTCCACTCTGT‑TTCCCGTTTTGCCTAGCCCGGACCCGTG‑CCGCCAGACCCCTGG‑C‑AAAGCGGGGGTAAT‑AAAGCGCGC‑GAGAATTCCCCCCGCCAGCATAAACCGACTTAGTGAAAGTATTGTCATTCTTGTCTCCTTTGTCGTTGTTTTATTCCTGATTGTCAGGGTTCGAGGGTATCAGTAGCTGCCCCATCAGTTTGCCGTCATGGGCGt < 1:195975/228‑1 (MQ=255) ggTAAAC‑GTCTTTCCGCTGGCTTCGGT‑CACGCTGT‑ATTCCGTATTGCCCTGACCGTAACCCTG‑CTGCCAGAACCCCGG‑G‑ATAGCAGAGGCATT‑AAAGCTCGC‑GAGCAGTACACCCGCCAGCATAAACCGACTTAGTGAAAGTATTGTCATTCTTGTCTCCTTTGTCGTTGTTTTATTCCTGATTTTCAGGGTTCGA‑GGTATCATTAGCTGCCCCATCATTTTGCCGTCATGGGGGTACt > 1:387981/1‑239 (MQ=255) ggTAAAC‑GTCTTTCCGCTGGCTTCGGT‑CACGCTGT‑ATTCCGTATTGCCCTGACCGTAACCCTG‑CTGCCAGAACCCCGG‑G‑ATAGCAGAGGCATT‑AAAGCTCGC‑GAGCAGTACACCCGCCAGCATAAACCGACTTAGTGAAAGTATTGTCATTCTTGTCTCCTTTGTCGTTGTTTTATTCCTGATTGTCAGGGTTCGAGGGTATCAGTAGCTGCCCCATCAGTTTGCCGTCATGGGCGt > 2:718136/1‑237 (MQ=255) cctgTCTTTCCGCTTGCTTGGTT‑CCCGTTGT‑ACTCCGTATCCCCCTGACCTTACCCCTG‑CTGCAAACACCCGGA‑A‑AAAGCAGAGGAATT‑AAACCTCTC‑GAGCAGTACCCCCGCCAGCATAAACCGACTTATTGAAATTATTGTCATTCTTGTCTCCTTTGTCGTTGTTTTATTCCTGATTGTCAGGGTTCGAGGGTATCAGTAGCTGCCCCATCAGTTTGCCGTCATGGGCGTACTCaa < 1:862870/236‑1 (MQ=255) tgggctcgggccACGTTTT‑ATCCCTTATGCCCCTGACCGAACCCCTG‑GCGCAAAACCCCCGG‑G‑ATAGCAGGGGCATT‑AAAGCCCGG‑GAGCAGTCACCCCGCCAGCATAAACCGACTTAGTGAAAGTATTGTCATTCTTGTCTCCTTTGTCGTTGTTTTATTCCTGATTGTCAGGGTTCGAGGGTATCAGTAGCTGCCCCATCAGTTTGCCGTCATGGGCGTACTCAAAGTATTTTTCtt < 2:818098/228‑1 (MQ=255) tGGCTTCGGT‑CCTGCGTT‑ATTCCGTTTGGCCCGACCCTTACCCCTG‑CTGCCA‑AACCCCGG‑GAATAGCAGGGGCTTT‑AAGGCTGCA‑GAGAAGTACCCCCGCCAGCATAAACCGACTTAGTGAAAGTATTGTCATTCTTGTCTCCTTTGTCGTTGTTTTATTCCTGATTGTCAGGGTTCGAGGGTATCAGTAGCTGCTCCATCAGTTTGCCGTCATGGGCGTACTCAAAGTATTTTTCtt < 2:25106/238‑1 (MQ=255) ctgttttcggtccctgttttacccGTTTTGCCCTGCCCGTACCCCTG‑CTGCCAGACCCCCGG‑G‑AAAGCAGAGGCATT‑AAAGCCCGC‑GAGCAGTACCCCCGCCAGCATAAACCGACTTAGTGAAAGTATTGTCATTCTTGTCTCCTTTGTCGTTGTTTTATTCCTGATTGTCAGGGTTCGAGGGTATCAGTAGCTGCCCCATCAGTTTGCCGTCATGGGCGTACTCAAAGTATTTTTCtt < 1:718136/217‑1 (MQ=255) gCTTCGGT‑CACGCTGT‑ATTCCGTATTGCCCTGACCGTAACCCTG‑CTGCCAGAACCCCGG‑G‑ATAGCAGAGGCATT‑AAAGCTCGC‑GAGCAGTACACCCGCCAGCATAAACCGACTTAGTGAAAGTATTGTCATTCTTGTCTCCTTTGTCGTTGTTTTATTCCTGATTGTCAGGGTTCGAGGGTATCAGTAGCTGCCCCATCAGTTTGCCg > 2:626577/1‑208 (MQ=255) ggT‑CACGCTGT‑ATTCCGTATTGCCCTGACCGTAACCCTG‑CTGCCAGAACCCCGG‑G‑ATAGCAGAGGCATT‑AAAGCTCGC‑GAGCAGTACACCCGCCAGCATAAACCGACTTAGTGAAAGTATTGTCATTCTTGTCTCCTTTGTCGTTGTTTTATTCCTGATTGTCAGGGTTCGAGGGTATCAGTAGCTGCCCCATCAGTTTGCCGTCATGGGCGTACTCAAAGTATTTTTCTTTGGTATAc > 2:740827/1‑239 (MQ=255) tGT‑ATTCCGTATTGCCCGGACCGTACCCCTG‑TCGCCAGACCCCCGG‑G‑ATAGCAGGGGCATT‑AAAGCCCGC‑GAGCAGTACCCCCGCCAGCATAAACCGACTTAGTGAAAGTATTGTCATTCTTGTCTCCTTTGTCGTTGTTTTATTCCTGATTGTCAGGGTTCGAGGGTATCAGTAGCTGCCCCATCAGTTTGCCGTCATGGGCGTACTCAAAGTATTTTTCTTTGGTATACGGGTCCGt < 2:107842/239‑1 (MQ=255) cGTTTTGCCCTGCCCGAATCCCGC‑GTGCCAGACCCCCGG‑G‑ATAGCAGGGGCATT‑AAAGCTCGC‑GACCATTCCTCCCGCCAGCATAAACCGACTTAGTGAAAGTATTGTCATTCTTGTCTCCTTTGTCGTTGTTTTATTCCTGATTGTCAGGGTTCGAGGGTATCAGTAGCTGCCCCATCAGTTTGCCGTCATGGGCGTACTCAAAGTATTTTTCTTTGGTATACGGGTCCGTCAcctcc < 2:892881/239‑1 (MQ=255) tATTGCCCTGACCGTAACCCTG‑CTGCCAGAACCCCGG‑G‑ATAGCAGAGGCATT‑AAAGCTCGC‑GAGCAGTACACCCGCCAGCATAAACCGACTTAGTGAAAGTATTGTCATTCTTGTCTCCTTTGTCGTTGTTTTATTCCTGATTGTCAGGGTTCGAGGGTATCCGTAGCTGCCCCATACGTTTTCCGTCCTGGGCGTACTCAAAGAATTTTTTTTTGGTTTACGGGTCCGTCCcctccgg > 1:133884/1‑237 (MQ=255) tATTGCCCTGACCGTAACCCTG‑CTGCCAGAACCCCGG‑G‑ATAGCAGAGGCATT‑AAAGCTCGC‑GAGCAGTACACCCGCCAGCATAAACCGACTTAGTGAAAGTATTGTCATTCTTGTCTCCTTTGTCGTTGTTTTATTCCTGATTGTCAGGGTTCGAGGGTATCAGTAGCTGCCCCATCAGTTTGCCGTCATGGCGGTACTCAAAGTATTTTTCTTTGGTATACGGGTCCGTCAcccccgg > 1:646205/1‑237 (MQ=255) tGCCCTGACCGTAACCCTG‑CTGCCAGAACCCCGG‑G‑ATAGCAGAGGCATT‑AAAGCTCGC‑GAGCAGTACACCCGCCAGCATAAACCGACTTAGTGAAAGTATTGTCATTCTTGTCTCCTTTGTCGTTGTTTTATTCCTGATTGTCAGGGTTCGAGGGTATCAGTAGCTGCCCCCTCAGTTTGCCGTCATGGGCGTACTCAAAGAATTTTTCTTTGGTAACCGGGTCGGTCACCTCCTggaa > 1:26214/1‑237 (MQ=255) tGCCCTGACCGTAACCCTG‑CTGCCAGAACCCCGG‑G‑ATAGCAGAGGCATT‑AAAGCTCGC‑GAGCAGTACACCCGCCAGCATAAACCGACTTAGTGAAAGTATTGTCATTCTTGTCTCCTTTGTCGTTGTTTTATTCCTGATTGTCAGGGTTCGAGGGTATCAGTAGCTGCCCCATCAGTTTGCCGTCATGGGCGTACTCAAAGTATTTTTCTTTGGTATACGGGTCCGTCACCTCCTGGTa > 2:289026/1‑239 (MQ=255) tGCCCTGACCGTAACCCTG‑CTGCCAGAACCCCGG‑G‑ATAGCAGAGGCATT‑AAAGCTCGC‑GAGCAGTACACCCGCCAGCATAAACCGACTTAGTGAAAGTATTGTCATTCTTGTCTCCTTTGTCGTTGTTTTATTCCTGATTGTCAGGGTTCGAGGGTATCAGTAGCTGCCCCATCAGTTTGCCGTCATGGACGTACTCAAAGTATTTTTCTTTGGTATACGGGTCCGTCACCTCCTGGTa > 2:861323/1‑239 (MQ=255) cccTGACCGTAACCCTG‑CTGCCAGAACCCCGG‑G‑ATAGCAGAGGCATT‑AAAGCTCGC‑GAGCAGTACACCCGCCAGCATAAACCGACTTAGTGTAAGTATTGTCATTCTTGTCTCCTTTGTCGTTGTTTTATTCCTGCTTGTCAGGGTTCGAGGGTATCAGTAGCTGCCCCATCAGTTTGCCGTCATGGGCGTCCTCAAAGTATTTTTCTTTGGTATACGGGTCCGTCACCTCCTGGTAt > 2:457647/1‑238 (MQ=255) ccttccctgactctttgtcccAGACCCCGGG‑G‑ATGCCAGA‑GCATTAAAAGCTCGG‑GACGTGTACCCCCGCCAGCATAAACCGACTTAGTGAAAGTATTGTCATTCTTGTCTCCTTTGTCGTTGTTTTATTCCTGATTGTCAGGGTTCGAGGGTATCAGTAGCTGCCCCATCAGTTTGCCGTCATGGGCGTACTCAAAGTATTTTTCTTTGGTATACGGGTCCGTCACCTCCTGGTATTc < 2:270113/220‑1 (MQ=255) tGACCGTAACCCTG‑CTGCCAGAACCCCGG‑G‑ATAGCAGAGGCATT‑AAAGCTCGC‑GAGCAGTACACCCGCCAGCATAAACCGACTTAGTGAAAGTATTGTCATTCTTGTCTCCTTTGTCGTTGTTTTATTCCTGATTGTCAGGGTTCGAGGGTATCAGTAGCTGCCCCATCAGTTTGCCGTCATGGGCGTACTCAAAGTATTTTTCTTTGGTATACGGGTCCGTCACCTCCTGGTATTCCa > 2:735477/1‑239 (MQ=255) aCCGTAACCCTG‑CTGCCAGAACCCCGG‑G‑ATAGCAGAGGCATT‑AAAGCTCGC‑GAGCAGTACACCCGCCAGCATAAACCGACTTAGTGAAAGTATTGTCATTCTTGTCTCCTTTGTCGTTGTTTTATTCCTGATTGTCAGGGTTCGAGGGTATCAGTAGCTGCCCCATCAGTTTGCCGTCATGGGCGTACTCAAAGTATTTTTCTTTGGTATACGGGTCCGTCACCTCCTGGTATTCCAGt > 2:728601/1‑239 (MQ=255) aCCGTAACCCTG‑CTGCCAGAACCCCGG‑G‑ATAGCAGAGGCATT‑AAAGCTCGC‑GAGCAGTACACCCGCCAGCATAAACCGACTTAGTGAAAGTATTGTCATTCTTGTCTCCTTTGTCGTTGTTTTATTCCTGATTGTCAGGGTTCGAGGGTATCAGTAGCTGCCCCATCAGTTTGCCGTCATGGGCGTACTCAAAGAATTTTTTTTTGGTATACGGGTCCTTCACCCCCTGGTTTTCCAGt > 1:43944/1‑239 (MQ=255) aaCCCTG‑CTGCCAGAACCCCGG‑G‑ATAGCAGAGGCATT‑AAAGCTCGC‑GAGCAGTACACCCGCCAGCATAAACCGACTTAGTGAAAGTATTGTCATTCTTGTCTCCTTTGTCGTTGTTTTATTCCTGATTGTCAGGGTTCGAGGGTATCAGTAGCTGCCCCATCAGTTTGCCGCCATTGGCGTACTCAAAGTATTTTTCTTTGGCATACGGGTCCGTCCCCTCTTGGTATTCCCGTTTGAt > 2:396538/1‑239 (MQ=255) tg‑ctgcCAGAACCCCGG‑G‑ATAGCAGAGGCATT‑AAAGCTCGC‑GAGCAGTACACCCGCCAGCATAAACCGACTTAGTGAAAGTATTGTCATTCTTGTCTCCTTTGTCGTTGTTTTATTCCTGATTGTCAGGGTTCGAGGGTATCAGTAGCTGCCCCATCAGTTTGCCGTCATGGGCGTACTCAAAGTATTTTTCTTTGGTATACGGGGCCGTCACCCCCTGGTTTTCCAGTTTTATGTTAt > 1:835521/1‑239 (MQ=255) tg‑ctgcCAGAACCCCGG‑G‑ATAGCAGAGGCATT‑AAAGCTCGC‑GAGCAGTACACCCGCCAGCATAAACCGACTTAGTGAAAGTATTGTCATTCTTGTCTCCTTTGTCGTTGTTTTATTCCTGATTGTCAGGGTTCGAGGGTATCAGTAGCTGCCCCATCAGTTTGCCGTCATGGGCGTACTCAAAGAATTTTTCTTTGGTATACGGGTCCGTCACCTCCTGGTATTCCAGTTTGATGTTa > 2:826093/1‑238 (MQ=255) tgccgcacgAACCCGGT‑G‑AAAGCGGGGGAATA‑AAACCTCGC‑AAGCAGTCACCCCGGCAGCATAAACCGACTTAGTGAAAGTATTGTCATTCTTGTCTCCTTTGTCGTTGTTTTATTCCTGATTGTCAGGGTTCGAGGGTATCAGTAGCTGCCCCATCAGTTTGCCGTCATGGGCGTACTCAAAGTATTTTTCTTTGGTATACGGGTCCGTCACCTCCTGGTATTCCAGTTTGATGTTAt < 2:133884/231‑1 (MQ=255) tcggccaggAACCCGGG‑G‑ATAGCAGAGGCATT‑AAAGCGCGC‑GAGCAGTCCCCCCGCCAGCATAAACCGACTTAGTGAAAGTATTGTCATTCTTGTCTCCTTTGTCGTTGTTTTATTCCTGATTGTCAGGGTTCGAGGGTATCAGTAGCTGCCCCATCAGTTTGCCGTCATGGGCGTACTCAAAGTATTTTTCTTTGGTATACGGGTCCGTCACCTCCTGGTATTCCAGTTTGATGTTAt < 2:334419/231‑1 (MQ=255) tcctccccacccccGGTG‑ATGGCGGGGGCATT‑AAAGCCTGG‑GGCCAGTACCCCCGCCAGCATAAACCGACTTAGTGAAAGTATTGTCATTCTTGTCTCCTTTGTCGTTGTTTTATTCCTGATTGTCAGGGTTCGAGGGTATCAGTAGCTGCCCCATCAGTTTGCCGTCATGGGCGTACTCAAAGTATTTTTCTTTGGTATACGGGTCCGTCACCTCCTGGTATTCCAGTTTGATGTTAt < 1:154055/229‑1 (MQ=255) ctgcCAGAACCCCGG‑G‑ATAGCAGAGGCATT‑AAAGCTCGC‑GAGCAGTACACCCGCCAGCATAAACCGACTTAGTGAAAGTATTGTCATTCTTGTCTCCTTTGTCGTTGTTTTATTCCTGATTGTCAGGGTTCGAGGGTATCAGTAGCTGCCCCATCAGTTTGCCGTCATGGGCGTACTCAAAGTATTTTTCTTTGGTATACGGGTCCGTACCCCCCTGTTATTCCAGTTTGATGTTAtgg > 1:466381/1‑237 (MQ=255) cccGG‑G‑ATAGCAGGGGCATA‑AAAGCGCGA‑GAGAAGTACCCCCGCCAGCATAAACCGACTTAGTGAAAGTATTGTCATTCTTGTCTCCTTTGTCGTTGTTTTATTCCTGATTGTCAGGGTTCGAGGGTATCAGTAGCTGCCCCATCAGTTTGCCGTCATGGGCGTACTCAAAGTATTTTTCTTTGGTATACGGGTCCGTCACCTCCTGGTATTCCAGTTTGATGTTATCGGCAATAcaca < 2:108011/239‑1 (MQ=255) cGG‑G‑ATAGCAGAGGCATT‑AAAGCTCGC‑GAGCAGTACACCCGCCAGCATAAACCGACTTAGTGAAAGTATTGTCATTCTTGTCTCCTTTGTCGTTGTTTTATTCCTGATTGTCAGGGTTCGAGGGTATCAGTAGCTGCCCCATCAGTTTGCCGTCATGGGCGTACTCAAAGTATTTTTCTTTGGTATACGGGTCCGTCACCTCCTGGTATTCCAGTTTGATGTTATTGGCAATACACAg > 2:713787/1‑238 (MQ=255) gg‑g‑ATAGCAGAGGCATT‑AAAGCTCGC‑GAGCAGTACACCCGCCAGCATAAACCGACTTAGTGAAAGTATTGTCATTCTTGTCTCCTTTGTCGTTGTTTTATTCCTGATTGTCAGGGTTCGAGGGTATCAGTAGCTGCCCCATCAGTTTGCCGTCATGGGCGTACTCAAAGTATTTTTCTTTGGTATACGGGTCCGTCACCTCCTGGTATTCCAGTTTGATGTTATCGGCAATACAAAgc > 2:812778/1‑238 (MQ=255) gg‑g‑ATAGCAGAGGCATT‑AAAGCTCGC‑GAGCAGTACACCCGCCAGCATAAACCGACTTAGTGAAAGTATTGTCATTCTTGTCTCCTTTGTCGTTGTTTTATTCCTGATTGTCAGGGTTCGAGGGTATCAGTAGCTGCCCCATCAGTTTGCCGTCATGGGCGTACTCAAAGTATTTTTCTTTGGTATACGGGTCCGTCACCTCCTGGTATTCCAGTTTGATGTTATCGGCAATAAACAgc > 2:343788/1‑238 (MQ=255) g‑ATAGCAGAGGCATT‑AAAGCTCGC‑GAGCAGTACACCCGCCAGCATAAACCGACTTAGTGAAAGTATTGTCATTCTTGTCTCCTTTGTCGTTGTTTTATTCCTGATTGTCAGGGTTCGAGGGTATCAGTAGCTGCCCCATCAGTTTGCCGTCATGGGCGTACTCAAGGCATTTTTCTTTGGAATACGGGTCCGTCCCCTCCTGGTATTCCAGTTTGATGTTATCGGCATTaaacgagg > 2:432527/1‑233 (MQ=255) | CTGGACGGAATAATGTACTGCTGGTGATCCATCACTACGGTGATAGTAGTGTCGTCATCGTGCGAACTGACCATCTTGTCATCGGCAA‑GGGTAAGAAAGACTGAATGCTGATAGAAACCATTCTGGTCCGGGTTCCCTGTGCAGTTGAT‑GGTAAAC‑GTCTTTCCGCTGGCTTCGGT‑CACGCTGT‑ATTCCGTATTGCCCTGACCGTAACCCTG‑CTGCCAGAACCCCGG‑G‑ATAGCAGAGGCATT‑AAAGCTCGC‑GAGCAGTACACCCGCCAGCATAAACCGACTTAGTGAAAGTATTGTCATTCTTGTCTCCTTTGTCGTTGTTTTATTCCTGATTGTCAGGGTTCGAGGGTATCAGTAGCTGCCCCATCAGTTTGCCGTCATGGGCGTACTCAAAGTATTTTTCTTTGGTATACGGGTCCGTCACCTCCTGGTATTCCAGTTTGATGTTATCGGCAATACACAGCG > NC_000913/265789‑266252 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |