| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 397,917 | C→T | 12.3% | L16L (CTG→TTG) | yaiW → | microcin Bac7 uptake protein, outer membrane surface‑exposed lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 397,917 | 0 | C | T | 12.3% | 153.5 / 3.6 | 69 | L16L (CTG→TTG) | yaiW | microcin Bac7 uptake protein, outer membrane surface‑exposed lipoprotein |
| Reads supporting (aligned to +/- strand): ref base C (25/35); new base T (7/2); total (32/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.09e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CTCGGCCTGATGACGCAGATTACCAACGTTTTTGGTCAGGTTCGCGGTGCTTTCCAGTACCTGATTAACTCATGGACCACACTGGTTGAGTTGATGTCTATCTACAAACGTCTGCGCAGCTTTGAACATGAGCTGGATGGTGACAAAATTCAGGAAGTAACCCATACCTTGAGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATCCTCTATCTTCGCTGTCATTGTTGGCGGT‑TCTGGTTTTAGCGGGGTGTAGTAGTCAGGCTCCGCAAC‑CG‑TT‑GAAAA‑AGGGCGAAAAAGCGATAGATGTAGCGAGCGTCGTGCGGCAGAAGATGCCTGCGAGCGTGAAAGACCGCGATGCCTGGGCGAAAGATCTCGCCACCACCTTTGAAAGTCAGGGG‑CTGGCACCGA‑CGCTGGAAAACGTCTGCTCGGTGCTGGCGGTGGCGCAGCAGGAGTCA > NC_000913/397683‑398132 | cTCGGCCTGATGACGCAGATTACCAACGTTTTTGGTCAGGTTCGCGGTGCTTTCCAGTACCTGATTAACTCATGGACCACACTGGTTGAGTTGATGTCTATCTACAAACGTCTGCGCAGCTTTGAACATGAGCTGGATGGTGACAAAATTCAGGAAGTAACCCATCCCTTGAGCTAAAAAGGAGAAGTAATGTCGCCCGTCCATCCTCTATCTTCGCTGTCATTGTTGGCGGT‑TCTTGt > 2:506929/1‑239 (MQ=255)cTCGGCCTGATGACGCAGATTACCAACGTTTTTGGTCAGGTTCGCGGTGCTTTCCAGTACCTGATTAACTCATGGACCACACTGGTTGAGTTGATGTCTATCTACAAACGTCTGCGCAGCTTTGAACATGAGCTGGATGGTGACAAAATTCAGGAAGTAACCCATACCTTGAGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATCCTCTATCTTCGCTGTCATTGTTGGCGGT‑TTTggg > 2:204078/1‑238 (MQ=255) ttgtgaCGCAGATTACCAACGTTTTTGGTCAGGTTCGCGGTGCTTTCCAGTCACTGATTAACTCATGGAACACACTGGTTGAGTTGATGTCTATCTACAAACGTCTGCGCAGCTTTGAACATGAGCTGGATGGTGACAAAATTCAGGAAGTAACCCATACCTTGAGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATCCTCTATCTTCGCTGTCATTGTTGGCGGT‑TCTGGTTTTAGCg < 2:392735/236‑1 (MQ=255) tgttgaCGCAATTTACCACAGTTTTTGGGCAGGTTGGCGGTGCTTTCCAGTTCCTGAGTAACTCATGGACCACACTGGTTGAGTTGATGTCTATCTACAAACGTCTGCGCAGCTTTGAACATGAGCTGGATGGTGACAAAATTCAGGAAGTAACCCATACCTTGAGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATCCTCTATCTTCGCTGTCATTGTTGGCGGT‑TCTGGTTTTAGCg < 1:270625/236‑1 (MQ=255) tgattaCGCAGATTACCAACGTTTTTGGTCAGGTTCGCGGGGCTTTCCAGTACCTGATTAACTCATGGACCACACTTGTTGAGTTGATGTCTATCTACAAACGTCTGCGCAGCTTTGAACATGATCTGGATGGTGACAAAATTCAGGAAGTAACCCATACCTTGAGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATCCTCTATCTTCGCTGTCATTGTTGGCGGT‑TCTGGTTTTAGCg < 2:55406/239‑1 (MQ=255) tgatgaCGCAGATTACCAACGTTTTTGGTCAGGTTCGCGGTGCTTTCCAGTACCTGATTAACTCATGGACCACACTGGTTGAGTTGATGTCTATCTACAAACGTCTGCGCAGCTTTGAACATGAGCTGGATGGTGACAAAATTCAGGAAGTAACCCATACCTTGAGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATCCTCTATCTTCGCTGTCATTGTTGGCGGT‑TCTGGTTTTAGCg < 2:718342/239‑1 (MQ=255) tgatgaCGCAGATTACCAACGTTTTTGGTCAGGTTCGCGGTGCTTTCCAGTACCTGATTAACTCATGGACCACACTGGTTGAGTTGATGTCTATCTACAAACGTCTGCGCAGCTTTGAACATGAGCTGGATGGTGACAAAATTCAGGAAGTAACCCATACCTTGAGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATCCTCTATCTTCGCTGTCATTGTTGGCGGT‑TCTGGTTTTAGCg < 2:658190/239‑1 (MQ=255) tgaaggcggaGATTACCAACGTTTTTGGTCAGGTTCGCGGTGCTTTCCAGTACCTGATTAACTCATGGACCACACTGGTTGAGTTGATGTCTATCTACAAACGTCTGCGCAGCTTTGAACATGAGCTGGATGGTGACAAAATTCAGGAAGTAACCCATACCCTGAGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATCCTCTATCTTCGCTGTCATTGTTGGCGGT‑TCTGGTTTTAGCg < 2:107540/230‑1 (MQ=255) attcctattgttgccaccctttttGGTGAGTTTGTCGGTGTTTGACAGTCCCTGATTAACTCATGGACCACTCTGGATGGGGTGATGTCTATCTACAAACGTCCGCGCAGCTTTGAACATGAGCGGGATGGTGACAAAATTCAGGAAGTAACCCATACCTTGAGCTAAATAGGAGAAGTAATGCCGCGCGTCAATCCTTTATCTTCTCTGCCATTGTTGGCGGT‑TCTCGTTTTAgatgc < 1:597093/220‑5 (MQ=255) atgaCGCAGATTACCAACGTTTTTGGTCAGGTTCGCGGTGCTTTCCAGTACCTGATTAACTCATGGACCACACTGGTTGAGTTGATGTCTATCTACAAACGTCTGCGCAGCTTTGAACATGAGCTGGATGGGGACAAAATTCAGGAAGTAACCCATACCTTGAGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATCCTCTATCTTCGATGTCATTGTTGGCGGT‑TCTGGGTTTTACggg > 2:369602/1‑239 (MQ=255) tgaCGCAGATTACCAACGTTTTTGGGCAGGTTCGCAGTGCTTTCCGGTACCTGATTAACTCATGGACCACACTGGTTGAGTTGATGTCTATCTACAAACGTCTGCGCAGCTTTGAACATGAGCTGGATGGTGACAAAATTCAGGAAGTAACCCATACCTTGAGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATCCTCTATCTTCGCTGTCATTGTTGGCGGT‑TCTGGTTTTAGCggg < 2:120872/238‑1 (MQ=255) tgccATCGTTTTTGCTCAGGTTCGCGGTGCTTTCCTGTCCCTGATTCAATACGGGCACACAGCGGTTGAGTTGATGTCTACCTACAAGCGTCTGCGCAGCTTTGAACATGAGCTGGATGGTGACAAAATTCAGGCAGTAACCCATACCTTGAGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATCCTCTATCTTCGCTGTCATTGTTGGCGGT‑TCTGGTTGTAGCGGGGTGTAGTAGTc < 1:544028/237‑1 (MQ=255) tccaccttttttGGTCAGTGTCGCGGGTCTTTCCAGTCCCTGGGTAACTCATGGGCCACAGTGGTTTAGTTGATGTCTATCTACAAACGTCTGCGCAGCTTTGAACATGAGCTGGATGGTGACAAAATTCAGGAAGTAACCCATACCTTGAGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATCCTCTATCGTCGCTGTCATTGTTGGCGGT‑TCTGGTTTTAGCGGGGTGTAGTAGTCa < 1:221482/232‑1 (MQ=255) tttttGGTCAGGTTCGCGGTGCTTTCCAGTACCTGATTAACTCATGGACCACACTGGTTGAGTTGATGTCTATCTACAAACGTCTGCGCAGCTTTGAACATGAGCTGGATGGTGACAAAATTCAGAACGTAACCCATACCTTGAGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATCCTCTATCTTGCCTGTCATTGTTGGCGGTGTCGGTTTTGAGGGGGgtgaggtttcacggccc > 2:807431/1‑224 (MQ=255) ttttGGGCAGGTTCGCGGTTCTTTCCAGTACCTGATTAACTCATGGACCACACTGGTTGAGTTGATGTCTATCTACAAACGTCTGCGCAGCTTTGAACATGAGCTGGATGGTGACAAAATTCAGGAAGTAACCCATACCTTGAGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATCCTCTATCTTCGCTGTCATTGTTGGCGGT‑TCTGGTTTTAGCGGGGTGTAGTAGTCAGGCTCCGc < 1:651755/239‑1 (MQ=255) gTTCGCGGTGCTTTCCAGTACCTGATTAACTCATGGACCACACTGGTTGAGTTGATGTCTATCTACAAACGTCTGCGCAGCTTTGAAAATGAGCTGGATGGTTACAAAATTCAGGAAGTAACCCATACCTTGGGCTAAACAGGAGAAGTAATGTCGCGCGTCAATCCTCTATCTTCGCTGTCATTGTTGGCGGT‑TTTGGTTTTGGCGGGGGGAGGAAGTGCGGCGCCGCAAC‑CG‑TT‑Gaa > 1:172606/1‑239 (MQ=255) cTTTCCAGTACCTGATTAACTCATGGACCACACTGGTTGAGTTGATGTCTATCTACAAACGTCTGCGCAGCTTTGAACATGAGCTGGATGGTGACAAAATTCAGGAAGTAACCCATACCTTGAGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATCCTCTATCTTCGCTGTCATTGTTGGCGGT‑TCTGGTTTTAGCGGGgtgt < 2:372111/203‑1 (MQ=255) cAGTTCCTGATTAACTCAGGGGCCCCGCTGGTTGAGTTGATGTCTATCTACAATCGTCTGCGCAGCTTTGAACATGAGCTGGATGGTGACAAAATTCAGGAAGTAACCCATACCTTGAGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATCCGCTATCTTCGCTGTCATTGTTGGCGGT‑TCTGGTTTTAGCGGGGTGTAGTAGTCAGGCTCCGCAAC‑CG‑TT‑GAAAA‑AGGGCGAAAAAGc < 2:781292/239‑1 (MQ=255) ttccctttttAACTAATGGTCCACACGGGTTGAGTTGAAGTGTTTCTTAACACGGCTGCTTAGTTTTGAACATGAGCTGGATGGTGACAAAATTCAGGAAGTAACCCATACCTTTAGCGAAAAAGGAGAAGTAATGTCGCGCGTCAATCCTCTATCTTCGCTGTCATTGTTGGCGGT‑TCTGGTTTTAGCGGGGTGTAGTAGTCAGGCTCCGCAAC‑CG‑TT‑GAAAA‑AGGGCGAAAAAGCGa < 1:883872/231‑1 (MQ=255) tccTGATTAACTCATGGACCACACTGGTTGAGTTGATGTCTATCTACAAACGTCTGCGCAGCTTTGAACATGAGCTGGATGGTGACAAAATTCAGGAAGTAACCCATACCTTGAGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATCCTCTATCTTCGCTGTCATTGTTGGCGGT‑TCTGGTTTTAGCGGGGTGTAGTAGTCAGGCTCCGCAAC‑CG‑TT‑GAAAA‑AGGGCGAAAAAGCGAt < 2:523394/237‑1 (MQ=255) cccTTATTTACTCATGGTCCACTTTGGTTGAGTTGATGTCTATCTACAAACGTCTGCGCAGCTTTGAACATGAGCTGGATGGTGACAAAATTCAGGAAGTAACCCATACCTGGAGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATCCTCTATCTTCGCTGTCATTGTTGGCGGT‑TCTGGTTTTAGCGGGGTGTAGTAGTCAGGCTCCGCAAC‑CG‑TT‑GAAAA‑AGGGCGAAAAAGCGATa < 1:84953/238‑1 (MQ=255) ccTGATTAACTCATGGACCACACTGGTTGAGTTGATGTCTATCTACAAACGTCTGCGCAGCTTTGAACATGAGCTGGATGGTGACAAAATTCAGGAAGTAACCCATACCTTGAGCTACAAAGGAGAAGTAATGTCGCGCGTCAATCCGCTATCTTCGCTGTCATTGTTGGCGGT‑TTTGGGTTTTGGGGGGGGTAGTGGTACGGGTCCGCACC‑CG‑TT‑GAAAA‑AAGGGGGAAAAGGGaaaa > 1:450694/1‑236 (MQ=255) ccTGATTAACTCATGGACCACACTGGTTGAGTTGATGTCTATCTACAAACGTCTGCGCAGCTTTGAACATGAGCTGGATGGTGACAAAATTCAGGAAGTAACCCATACCTTGAGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATCCTCTATCTTCGCTGTCATTGTTGGCGGT‑TCTGGGTTTGTAGGGGGGTGGGGGGCAGGCTCCGGAAC‑CC‑TT‑GAAAA‑AGGAGGaaaaaaaggaag > 1:388695/1‑232 (MQ=255) gATTAACTCATGGACCACACTGGTTGAGTTGATGTCTATCTACAAACGTCTGCGCAGCTTTGAACATGAGCTGGATGGTGACAAAATTCAGGAAGTAACCCATACCTTGAGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATCCTCTATCTTCGCTGTCATTGTTGGCGGT‑TTTGGTTTTACAGGGGGGAAGGAGTCAGTCTCCCCTAC‑CGTTT‑GAAAAGAGGGCAaaaaggaaaaaag > 1:143005/1‑230 (MQ=255) gATTAACTCATGGACCACACTGGTTGAGTTGATGTCTATCTACAAACGTCTGCGCAGCTTTGAACATGAGCTGGATGGTGACAAAATTCAGGAAGTAACCCATACCTTGAGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATCCTCTATCTTCGCTGTCATTGTTGGCGGT‑TCTGGTTTTTGCGGGGGTGAGGAGTCAGGGTCCGCAAC‑CC‑TTGGAAAA‑AGGGGGaaaaggggtagaag > 2:129989/1‑229 (MQ=255) gATTAACTCATGGACCACACTGGTTGAGTTGATGTCTATCTACAAACGTCTGCGCAGCTTTGAACATGAGCTGGATGGTGACAAAATTCAGGAAGTAACCCATACCTTGAGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATCCTCTATCTTCGCTGTCATTGTTGGCGGT‑TCTGGTTTTAGCGGGCGGTAGTAGTCCGGCTCCGCAAC‑CG‑TT‑GTAAA‑AAGGCGCAAAAGCGATAGATg > 2:800196/1‑239 (MQ=255) gATTAACTCATGGACCACACTGGTTGAGTTGATGTCTATCTACAAACGTCTGCGCAGCTTTGAACATGAGCTGGATGGTGACAAAATTCAGGAAGTAACCCATACCTTGAGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATCCTCTATCTTCGCTGTCATTGTTGGCGGT‑TCTGGTTTTAACGGGGGGGAGTAGGTAAGCTCCCCAACATT‑TT‑GAAAA‑GGGGGGAAAACGcacgagag > 2:442260/1‑232 (MQ=255) aCTCATGGACCACACTGGTTGAGTTGATGTCTATCTACAAACGTCTGCGCAGCTTTGAACATGAGCTGGATGGTGACAAAATTCAGGAAGTAACCCATACCTTGAGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATCCTCTATCTTCGCTGTCATTGTTGGCGGT‑TCTGGTTTTAGCGGGGTGTAGTAGTCAGGCTCCGCAAC‑CG‑TT‑GAAAA‑AGGGCGAAAAAGCGATCGATGTagcg > 2:891605/1‑239 (MQ=255) cATGGACCACACTGGTTGAGCTGATGTCTATCTACAACCGTCTGCGCAGCTTTGAACATGAGCTGGATGGTGACAAAATTCAGGAAGTAACCCATACCTTGAGCTAAAAAGGAGACGTAATGTCGCGCGTACATCCTCTATCTTCGCTGTCATTGTTGGCGGT‑TCTGGTTTTAGCGGGGTGTACAAGGCAGGCTCCGCAAC‑CG‑TT‑GGACA‑AGGGTGGAAAAGCGCTAGacagatcgag > 2:161224/1‑229 (MQ=255) ggACCACACTGGTTGAGTTGATGTCTATCTACAAACGTCTGCGCAGCTTTGAACATGAGCTGGATGGTGACAAAATTCAGGAAGTAACCCATACCTTGAGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATCCTCTATCTTCGCTGTCCTTGTTGGCGGT‑TCTGGTTTTAACGGGGTGTAGTAGTCAGGCCCCGCAAC‑CG‑CT‑GCAAA‑AGGGCGAAAAAGCGATAGATGTAGCGAGcgtc > 2:410449/1‑239 (MQ=255) ggACCACACTGGTTGAGTTGATGTCTATCTACAAACGTCTGCGCAGCTTTGAACATGAGCTGGATGGTGACAAAATTCAGGAAGTAACCCATACCTTGAGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATCCTCTATCTTCGCTGTCATTGTTGGCGGT‑TCTGGGTTTAGCGGGGGGTGGGAGTGCGGGCCCGCAAC‑CG‑CT‑GGAAA‑AAGGCGaaaaaaagaaaaaagtagagaggggg > 1:428408/1‑218 (MQ=255) cgtttgtttgtttgaGGTCTACATTCAAACGTCTGCGACGCGTTGAAAATGAGGTGGATTGTGACAAAATTCAGGAAGTAACCCAGCCCTTGAGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATCCTCTATCTTCGCTGTCATTGTTGGCGGT‑TCTGGTTTTAGCTGGGTGTAGTAGTCAGGCTCCGCAAC‑CG‑TT‑GAAAA‑AGGGCGAAAAAGCGATAGATGTAGCGAGCGTCGTGCgg < 1:92571/228‑1 (MQ=255) cacTGGTTGAGTTGATGTCTATCTACAAACGTCTGCGCAGCTTTGAACATGAGCTGGATGGTGACAAAATTCAGGAAGTAACCCATACCTTGAGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATCCTCTATCTTCGCTGTCATTGTTGGCGGT‑TTTGGTTTTAGCGGGGGGTAGAAGGCAGGCTCCGCCAA‑CG‑TT‑TAAAA‑AGGGGTGAAAAGCGATCGATGTAGCGAGCGTCGTGCg > 2:815180/1‑238 (MQ=255) ttgaTGTCTATCTACAAACGTCTGCGCAGCTTTGAACATGAGCTGGATGGTGACAAAATTCAGGAAGTAACCCATACCTTGAGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATCCTCTATCTTCGCTGTCATTGTTGGCGGT‑TCTGGTTTTAGCGGGGTGTAGGAGTCAGGCTCCGCAAC‑CG‑TT‑GAAAA‑AGGGCGAAAAAGCGATAGATTTAGCGAGCGGCGTGCGGCAGAAGATg > 2:488332/1‑237 (MQ=255) tGTCTATCTACAAACGTCTGCGCAGCTTTGAACATGAGCTGGATGGTGACAAAATTCAGGAAGTAACCCATACCTTGAGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATCCTCTATCTTCGCTGTCATTGTTGGCGGT‑TCTGGTTTTTGAGGGGGGTAAGAGTCAGGCCCTGCAAC‑CC‑GT‑GACAA‑AGGGGGGAAAAACGCAAGATGTAACGAGAGCCGGGCGGCGGAAAAGGccgcgg > 1:553764/1‑235 (MQ=255) ttttatcttcaaactgtttcccAGCTTTGAACAGAAGCTGGATGGGGACAAAATTCAGGAAGTAACCCATACCTTGAGCTAAAAAGGAGAAGTAATGCCGCGCGACAATCCTCTATCTTCGCTGTCATTGTGGGCGGT‑TCTGGTTTTAGCGGGGTGTAGTAGTCAGGCTCCGCAAC‑CG‑TT‑GAAAA‑AGGGCGAAAAAGCGATAGATGTAGCGAGCGTCGTGCGGCAGAAGATGCCTGCGa < 1:38935/218‑1 (MQ=255) gTCTATCTACAAACGTCGTCGCAGCTTTGAACATGAGCTGGATGGTGACAATATTCAGGAAGTAACCCATACCTTGAGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATCCTCTATCTTCGCTGTCATTGTTGGCGGT‑TCTGGTTTTAGCGGGGTGTAGTAGTCAGGCTCCGCAAC‑CG‑TT‑GAAAA‑AGGGCGAAAAAGCGATAGATGTAGCGAGCGTCGTGCGGCAGAAGATGCCTGCGa < 2:27461/239‑1 (MQ=255) ttaaaaaaGGTCTGCGAAGCTTTGAACAGGAGGTGGATGGTGACAAAATTCAGGAAGTAACCCATACCTTTAGGTAAAAACGAGAAGTAATGTCGCGCGTCAATCCTCTAACTTCGCTGTCAGTGTTGGCGGT‑TCTGGTGTTAGCGGGGTGTAGTAGTCAGGCTCCGCAAC‑CG‑TT‑GAAAA‑AGGGCGAAAAAGCGAGAGATGTGGCGGGGGTCGTGCGGCAGAAGATGCCTGCGAGCGTg < 1:669992/234‑1 (MQ=255) tGCGCAGCTTTGAACATGAGCTGGATGGTGACAAAATTCAGGAAGTAACCCATACCTTGAGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATCCTCTATCTTCGCTGTCATTGTTGGCGGT‑TCTGGTTTTAGCGGGGTGTAGTAGTCAGGGTCCGCAAC‑CG‑TT‑GAAAA‑AGGGCGAAAAAGCGATAGATGTAGGGAGCGTCGTGCGGCAGAAGAGGCCTGGGGGCGGGAAAAAcccggat > 2:435238/1‑234 (MQ=255) tGCGCAGCTTTGAACATGAGCTGGATGGTAACAAAATTCAGGAAGTAACCCATACCTTGAGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATCCTCTATCTTCGCTGTCATTGTTGGCGGT‑GCTGGGTTTTGCGGGGGGGAGTAGTACGTCTCCGCCAC‑CC‑TT‑TTAAA‑ACGGCTCAAAAGCGGAAGAGATATCGACGGTAGTGCGGCCGAAAATAACTGCGAgagcaaaaaaacgggag > 1:412487/1‑223 (MQ=255) tacgCTTTTAACTTTGGCTGGATGGTGACCAAATCAAGGAAGTAACCCATACCTGGGTTTAATAAGGGACTGGAATGTCGGCGGTCAATCGTCTATCTTGGTGGTCATTGTTGGCGGT‑TCTTGTTTTAGCGGCGCGTAGTAGTCAGGCGCCGCAAC‑CG‑TT‑GAAAA‑AGGGCGAAAAAGCGATAGATGTAGCTAGCGTCGTGCGGCAGAAGATGCCTGCGAGCGTGAAAGACCGCGATGcc < 1:789302/236‑1 (MQ=255) gcAGCTTTGAACATGAGCTTGATGGTTACAAAATTCAGGAAGTAACCCATACCTTGAGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATCCTCTATCTTCGCTGTCATTGTTGGCGGT‑TCTGGTTTTAGCGGGGTGTAGTAGTCAGGCTCCGCAAC‑CG‑TT‑GAAAA‑AGGGCGAAAAAGCGATAGATGTAGCGAGCGTCGTGCGGCAGAAGATGCCTGCGAGCGTGAAAGACCGCGATGc < 2:428408/238‑1 (MQ=255) gcAGCTTTGAACATGAGCTGGATGGTGACAAAATTCAGGAAGTAACCCATACCTTGAGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATCCTCTATCTTCGCTGTCATTGTTGGCGGT‑TCTGGTTTTAGCGGGGTGTAGTAGTCAGGCTCCGCAAC‑CG‑TT‑GAAAA‑AGGGCGAAAAAGCGATAGATGTAGCGAGCGTCGTGCGGCAGAAGATGCCTGCGAGCGTGAAAGACCGCGATGcc < 2:461619/239‑1 (MQ=255) gcAGCTTTGAACATGAGCTGGATGGTGACAAAATTCAGGAAGTAACCCATACCTTGAGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATCCTCTATCTTCGCTGTCATTGTTGGCGGT‑TCTGGTTTTAGCGGGGTGTAGTAGTCAGGCTCCGCAAC‑CG‑TT‑GAAAA‑AGGGCGAAAAAGCGATAGATGTAGCGAGCGGCGTGCGGCAGAAGATGCCTGCGAGCGTGAAAGACCGCGATGcc < 2:262701/239‑1 (MQ=255) cTTTGAACATGAGCTGGATGGTGACAAAATTCAGGAAGTAACCCATACCTTGAGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATCCTCTATCTTCGCTGTCATTGTTGGCGGT‑TCTGGTTTTAGCGGGGTGTAGTAGTCAGGCTCCGCAAC‑CG‑TT‑GAAAA‑AGGGCGAAAAAGCGATAGATGTAGCGAGCGTCGTGCGGCAGAAGATGCCTGCGAGCGTGAAAGACCGCGATGc < 2:141341/234‑1 (MQ=255) aTGAGCTGGATGTGTACAAAATTCAGGAAGTAACCCATACCTTGAGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATCCTCTATCTTCGCTGTCATTGTTGGCGGT‑TCTGGTTTTAGCGGGGTGTAGTAGTCAGGCTCCGCAAC‑CG‑TT‑GAAAA‑AGGGCGAAAAAGCGATATATGTAGCGAGCGTCGTGCGGCAGAAGATGCCTGCGAGCGTGAAAGACCGCGATGCCTGGGCGAAAGAt < 2:886798/239‑1 (MQ=255) gAGCTGGATGGTGACAAAATTCAGGAAGTAACCCATACCTTGAGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATCCTCTATCTTCGCTGTCATTGTTGGCGGT‑TCTGGTTTTAGCGGGGTGTAGTAGTCAGGCTCCGCAAC‑CG‑TT‑TGAAA‑AGGGCGAAAAAGCGATAGATGTAGCGAGGGCCGGGCGGCAGAAGATGCCCGCGAGCGGGAAAGACCCCGATGGCCGGGGGAAAAAtg > 1:141341/1‑237 (MQ=255) gAGCTGGATGGTGACAAAATTCAGGAAGTAACCCATACCTTGAGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATCCTCTATCTTCGCTGTCATTGTTGGCGGT‑TCTGGTTTTAGCGGGGTGTAGTAGTCAGGCCCCGCAAC‑CG‑TT‑GGAAA‑AGAGCGAAAAAGCGATAGATGTAGGGAGCGGCCTGCGGCAGAAGAGGCCTGGGAGCGGGAAAGAACCCGAGGCCCTGGCGaaaaaaa > 1:79771/1‑234 (MQ=255) gAGCTGGATGGTGACAAAATTCAGGAAGTAACCCATACCTTGAGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATCCTCTATCTTCGCTGTCATTGTTGGCGGT‑TCTGGGTTTAGCGGGGTGTAGTAGTCAGGCTCCGCAAC‑CG‑TT‑GAAAA‑AGGGCGAAAAAGCGATAGATGTAGCGAGGGTCGTGCGGCAGAAGATGCCTGCGAGGGGGAAAGAACGCGAGGCCCGGGGGAAAGaac > 1:169457/1‑236 (MQ=255) gAGCTGGATCGGGACAAAATTCAGGAAGTAACCCATACCTTGAGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATCCTCTATCTTCGCTGTCATTGTTGGCGGT‑TCTGGTTTTAGCGGGGGGTAGTAGTCAGGCTCCGCAAC‑CG‑TT‑GAAAA‑AGGGCGAAAAAGCGATAGATGTAGCGAGCGTCGTGCGGCAGAAGATGCCTGCGACGGTGAAAAACCGCGAGACCGGGGGGGAAGaaa > 1:165941/1‑236 (MQ=255) tGGTGAAAAAATTCAGGAAGGAACCCATACCTTGAGCTAAAAAGGAGAAGTAATGTGGCGCGTCAATCCTCTATCTGCGCTGTCATTGTTGGCGGT‑TCTGGTTTTAGCGGGGTGTAGTAGTGAGGCTCCGCAAC‑CG‑TT‑GAAAA‑AGGGCGAAAAAGCGATAGATGTAGCGAGCGTCGTGCGGCAGAAGATGCCTGCGAGCGTGAAAGACCGCGATGCCTGGGCGAAAGATCTCGccacc < 1:506929/238‑1 (MQ=255) tGACAAAATTCAGGAAGTAACCCATACCTTGAGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATCCTCTATCTTCGCTGTCATTGTTGGCGGT‑TCTGGTTTTAGCGGGGTGTAGTAGTCAGGCTCCGCAAC‑CG‑TT‑GAAAA‑AGGGCGCAAAAGCGATAGATGTAGCGAGCGTCGTGCGGCCGAAGATGCCTGCGGGCGGGAAAAACCGCGGTGCCTGGGCGAAAGAGCTCGCccccac > 2:634269/1‑237 (MQ=255) ggTAACCCTTTCCTTTGGCTAAAAGGGGTGAGTTATGTCGCTCGGCAATGCGTTATCTGCGCTTGCATGGTTGGCTGT‑TCTGGTTTTAGCGGGGTGTAGTAGGCAGGCTCCGCAAC‑CG‑GT‑GAAAA‑AGGGCGAAAAAGCGATAGATGTAGCGAGCGTCGTGCGGCAGAAGATGCCTGCGAGCGTGAAAGACCGCGATGCCTGGGCGAAAGATCTCGCCACCACCTTTGAAAGTCAgggg < 1:221560/237‑1 (MQ=255) aCCTTGAGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATCCTCTATCTTCGCTGTCATTGTTGGCGGT‑TCTGGTTTTAGCGGGGTGTAGTAGTCAGGCTCCGCAAC‑CG‑TT‑GAAAA‑AGGGCGAAAAAGCGATAGATGTAGCGAGCGTCGTGCGGCCGAAGATGCCTGCGAGCGTGAAAGACACCGAGGCCCGGGCGAAAAAACTCCCCAACCCCTTTTAAAGTCAGGGG‑CTGGCACCGa > 2:97450/1‑238 (MQ=255) ccTTGAGCTAAAAAGGAGAAGGAATGGCGCGCGTCAATCCTCTATCTTCGCTGTCATTGTTGGCGGT‑TCTGGTTTTAGCGGGGTGTAGTAGTCAGGCTCCGCAAC‑CG‑TT‑GAAAA‑AGGGCGAAAAAGCGATAGATGTAGCGAGCGTCGTGCGGCAGAAGATGCCTGCGAGCGTGAAAGACCGCGATGCCTGGGCGAAAGATCTCGCCACCACCTTTGAAAGTCAGGGG‑CTGGCACCGA‑Cg < 2:169457/239‑1 (MQ=255) gAGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATCCTCTATCTTCGCTGTCATTGTTGGCGGT‑TTTGGTTTTATCGGGGGGGAAGAGTCAGGCTCCGCCAC‑CG‑GT‑GGAAA‑AAGGCGAAAAAGCGAAAGATGTAACGTGCGGCGGGGTGCAGAAGAGGCCCGCGCGCGTGAAAGACCGCGCTGCCCGGGCGAGAGGTCTCCCCACCACCCTTGAAAATCAGGGGCCTGCCACCgcccagg > 1:607676/1‑233 (MQ=255) gAGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATCCTCTATCTTCGCTGTCATTGTTGGCGGT‑TCTGGTTTTAGCGGGGGGTAGTAGTCAGGCTCCGCAAC‑CG‑TT‑GAAAA‑AGGGCGAAAAAGCGATAGATGTAGCCAGCGGAGTGCGGCAGGAGATGCCTGAGAGCGGGAAAAACCGCGATGCCTGGGGGTAAGATACCGCCCCCCCCTTTGAAAGGCCGGGG‑GGGGGACCggacgtgg > 1:147462/1‑232 (MQ=255) aGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATCCTCTATCTTCGCTGTCATTGTTGGCGGT‑TCTGGTTTTAGCGGGGGGTAGTAGTTAGGCTCCGCCAC‑CG‑TT‑GAAAA‑AGGGCGGAAAAGCGAAAGATTTACGGGGCGCGGGTGGGCAGAAGAACGCCGCGGGGGGGAAAAACCGCGTGGCCTGGGGGGAAGAGCATGCCCCCCACATTGTAAGCCAGGGG‑CAGGcccgcgcgcggga > 1:175539/1‑227 (MQ=255) aGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATCCTCTATCTTCGCTGTCATTGTTGGCGGT‑TCTGGGTTTCGCGGGGTGTTGTAGTAAGGCTCCGCAAC‑CG‑AT‑GCAAA‑AAGGCGGAAAACCGATCACGGTAGCGAGCCGCGGGCGGACTCAAATGCCAGCACACAGGACAAACCGCGCTGCCCGGGCGACAAAACTCGCCAACACCTTGGAAAAGCAGGGG‑Cggggaaccacaccgga > 1:190148/1‑226 (MQ=255) cTAAAAAGGAGAAGTAATGTCGCGCGTCAATCCTCTATCTTCGCTGTCAGTGTTGGCGGT‑TCTGGTTTTAGCGGGGTGTAGTAGTCAGGGTCCGCAAC‑CG‑TT‑GAAAA‑AGGGCGAAAAAGCGATAGATGTAGCGAGCGTCGTGCGGCAGAAGATGCCTGCGAGCGTGAAAGACCGCGATGCCTGGGCGAAAGATCTCGCCTCCACCTTTGAAAGTCAGGGG‑CTGGCACCGA‑CGCTGGaa < 2:172606/238‑1 (MQ=255) gaattaatttcggcgtgcattCCTCTATCTCCGCTGCTATGTTTGGCGGT‑TCGGGTTTTAGCGGGGTTTAGTAGTCAGGCTCCGCAAC‑CG‑TT‑GAAAA‑AGGGCGAAAAAGCGATAGATGTAGCGAGCGTCGTGCGGCAGAAGATGCCTGCGAGCGTGAAAGACCGCGATGCCTGGGCGAAAGATCTCGCCACCACCTTTGAAAGTCAGGGG‑CTGGCACCGA‑CGCTGGAAAACGTCTGCt < 1:488332/218‑1 (MQ=255) gaAGTAATGTCTCGCGTCAATCCTCTATCTTCGCTGTCATTGTTGGCGGT‑TCTGGTTTTAGCGGGGTGTAGTAGTCAGGCTCCGCAAC‑CG‑TT‑GAAAA‑AGGGCGAAAAAGCGATAGATGTAGCGAGCGTCGTGCGGCAGAAGATGCCTGCGAGCGTGAAAGACCGCGATGCCTGGGCGAAAGATCTCGCCACCACCTTTGAAAGTCAGGGG‑CTGGCACCGA‑CGCTGGAAAACGTCTGCt < 2:450694/238‑1 (MQ=255) aaGTAATGGCGCGCGTCAATCCTCTATCGTCGCTGTCATTGGTGGCGGT‑TTTGGTTTTAGCGGGGTGTAGTAGTCAGGCTCCGCAAC‑CG‑TT‑GAAAA‑AGGGCGAAAAAGCGATAGATGTAGCGAGCGTCGTGCGGCAGAAGATGCCTGCGAGCGTGAAAGACCGCGATGCCTGGGCGAAAGATCTCGCCACCACCTTTGAAAGTCAGGGG‑CTGGCACCGA‑CGCTGGAAAACGTCTGCTc < 2:538783/238‑1 (MQ=255) gcgcgTCAATCCTCTATCTTCGCTGTCATTGTTGGCGGT‑TTTGGTTTTAGCGGGGTGTAGTCGGCAGGGCCCCCAAC‑CG‑TT‑GAAAA‑AAGGAGAAAAAGCCATAGAAGTTGCGCGCGGCGTGCGGCGAGAGAGGCCTGCGAGCGTGACAGACACGTATGCCTTGGCTCACAGTATCCCCACCACCTTTGCAAGTCAGGGC‑GAGGCCCCGACCCCTGAAAAACgcatcgccgggccgcggg > 1:840069/1‑222 (MQ=255) gcgcgTCAATCCTCTATCTTCGCTGTCATTGTTGGCGGT‑TCTGGTTTTAGCGGGGTGTAGTAGTCAGGCTCCGCAAC‑CG‑TT‑GAAAA‑AGGGCGAAAAAGCGATAGATGTAGCGAGCGTCGTGCGGCAGAAGATGCCTGCGAGCGTGAAAGACCGCGATGCCTGGGCGAAAGATCTCGCCACCACCTTTGAAAGTCAGGGG‑CTGGCACCGA‑CGCTGGAAAACGTCTGCTCGGTGCTGGCgg < 2:143005/239‑1 (MQ=255) ttctctttgttcggttgcATTGTTGGGGGT‑TTTGGTTTTAGCGGGGTGGAGTAGTCAGGCTCCGCAAC‑GG‑TT‑GAAAA‑AGGGCGAAAAAGCGATAGATGTAGCGAGCGTCGTGCGGCAGAAGATGCCTGCGAGCGTGAAAGACCGCGATGCCTGGGCGAAAGATCTCGCCACCACCTTTGAAAGTCAGGGG‑CTGGCACCGA‑CGCTGGAAAACGTCTGCTCGGTGCTGGCGGTGGCgcagc < 1:204078/222‑1 (MQ=255) tCTTCGCTGTCATTGTTGGCGGT‑TCTGGTTTTAGCGGGGTGTAGTAGTCAGGCTCCGCAAC‑CG‑TT‑GAAAA‑AGGGCGAAAAAGCGGTAGATGTAGCGAGCGGCGTGCGGGCGAAGATGCCGGCGAGCGTGAAAAACCACGATGCCTGGGCGGAAGATCTCGCCACCACCTTTGAAAGTCAGGGG‑CGGGCGCCGG‑CGCTGGAAAACGACTGCCCGGTGCCGGGGGGGGGgcagacggcagc > 1:654294/1‑231 (MQ=255) cTTCGCTGTCATTGTTGGCGGT‑TCTGGTTTTAGCGGGGTGTAGTAGTCAGGCTCCGCAAC‑CG‑TT‑GAAAA‑AGGGCGAAAAAGCGATAGATGTAGCGAGCGTCGTGCGGCAGAAGATGCCTGCGAGCGTGAAAGACCGCGATGCCTGGGCGAAAGATCTCGCCACCACCTTTGAAAGTCAGGGG‑CTGGCACCGA‑CGCTGGAAAACGTCTGCTCGGTGCTGGCGGTGGCGCAGCAGGAGTCa < 2:175539/239‑1 (MQ=255) cTTCGCTGTCATTGTTGGCGGT‑TCTGGTTTTAGCGGGGTGTAGTAGTCAGGCTCCGCAAC‑CG‑TT‑GAAAA‑AGGGCGAAAAAGCGATAGATGTAGCGAGCGTCGTGCGGCAGAAGATGCCTGCGAGCGTGAAAGACCGCGATGCCTGGGCGAAAGATCTCGCCACCACCTTTGAAAGTCAGGGG‑CTGGCACCGA‑CGCTGGAAAACGTCTGCTCGGTGCTGGCGGTGGCGCAGCAGGAGTCa < 2:213126/239‑1 (MQ=255) | CTCGGCCTGATGACGCAGATTACCAACGTTTTTGGTCAGGTTCGCGGTGCTTTCCAGTACCTGATTAACTCATGGACCACACTGGTTGAGTTGATGTCTATCTACAAACGTCTGCGCAGCTTTGAACATGAGCTGGATGGTGACAAAATTCAGGAAGTAACCCATACCTTGAGCTAAAAAGGAGAAGTAATGTCGCGCGTCAATCCTCTATCTTCGCTGTCATTGTTGGCGGT‑TCTGGTTTTAGCGGGGTGTAGTAGTCAGGCTCCGCAAC‑CG‑TT‑GAAAA‑AGGGCGAAAAAGCGATAGATGTAGCGAGCGTCGTGCGGCAGAAGATGCCTGCGAGCGTGAAAGACCGCGATGCCTGGGCGAAAGATCTCGCCACCACCTTTGAAAGTCAGGGG‑CTGGCACCGA‑CGCTGGAAAACGTCTGCTCGGTGCTGGCGGTGGCGCAGCAGGAGTCA > NC_000913/397683‑398132 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |