Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_000913 | 647,210 | A→C | 22.2% | G100G (GGT→GGG) | citG ← | 2‑(5''‑triphosphoribosyl)‑3'‑dephosphocoenzyme‑A synthase |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 647,210 | 0 | A | C | 22.2% | 136.5 / 7.2 | 75 | G100G (GGT→GGG) | citG | 2‑(5''‑triphosphoribosyl)‑3'‑dephosphocoenzyme‑A synthase |
Reads supporting (aligned to +/- strand): ref base A (42/12); new base C (2/18); total (44/31) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.43e-07 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
TGCGCCGGTAAGGCCAAGCTGTTGGTACAACCGTTGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTT‑GGC‑GTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTG‑CCGCACATAGCAGCCCT‑AAAGAAAAAATG‑CTGCCTTTATG‑CGTGTTTACGCCCGCAGTGGCGCGGAACA‑TATCA‑CCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGTGACAGATTGACTTCAGTCAGCATGGCGCGCCAGCCCAGCAGGG > NC_000913/646973‑647445 | tGCGCCGGTAAGGCCAAGCTGTTGGTACAACCGTTGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTT‑GGC‑GTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTG‑CCGCACATAGCAGCCCT‑AAAGAAAAAATG‑CTGCCTTTATG‑CGTGTTTACGCCCGCAGTGGCGCGGAACA‑TATCa > 2:842482/1‑238 (MQ=255) tGCGCCGGTAAGGCCAAGCTGTTGGTACAACCGTTGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTT‑GGC‑GTTACCGGTTGGTTGAGTTGAAGCAAACGGCAAATTG‑CACCCCATAGCAGCTCC‑AAAGAAAAAATG‑CTGCCCTTATA‑CGGTTTTACCCCCCCAGGGGGCAGGAACA‑AATCa > 1:497746/1‑238 (MQ=255) cGTTGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTT‑GGC‑GTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTG‑CCGCACATAGCAGCCCT‑AAAGAAAAAATG‑CTGCCTTTATG‑CGTGTTTACGCCCGCAGTGGCGCGGAACA‑TATCA‑CCTTCGCAAGCCATACCAATTGGGCGTAATcc > 2:716680/1‑239 (MQ=255) cGTTGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTT‑GGC‑GTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTG‑CCGCACATAGCAGCCCT‑AAAGAAAAAATG‑CTGCCTTTATG‑CGGGTTTACGCCCGCAGTGCGGCGGAAAA‑AATCA‑ACTTCCCAAACCATACAAAATgggggaaaacg > 1:340413/1‑231 (MQ=255) ttGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGCACGAACGGTTGTT‑GGC‑GTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTG‑CCGCACATAGCAGCCCT‑AAAGAAAAAATG‑CTGCCTTTATG‑CGTGTTTACGCCCGCAGTGGCGCGGAGCA‑TATCA‑CCTTCGAATGCCCTACCAATTGGGCGTAATCCgg > 2:511785/1‑238 (MQ=255) ttGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTT‑GGC‑GTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTG‑CCGCACATAGCAGCCCT‑AAAGAAAAAATG‑CTGCCTTTATG‑CGTGTTTACGCCCGCAGTGGCGCGGAACA‑TATCA‑CCTTCGCAAGCCATACCAATTGGGCGTAATCCGt > 2:762749/1‑239 (MQ=255) ttGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTT‑GGC‑GTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTG‑CCGCACATAGCAGCCCT‑AAAGAAAAAATG‑CTGCCTTTATG‑CGGGTTTACACCCGCAGTGGCGCGGAACA‑TATCA‑CCTTCGCAAGCCATACCACTTGGGCGTAATCCGt > 2:441269/1‑239 (MQ=255) gACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTT‑GGC‑GTTACCGGTTGGTTGAGTTGAACCAAACGGCCAATTG‑CCGCACATAGCAGCCCT‑AAAGAAAAAATG‑CTGCCATTCTC‑CGGGTTTACGCCCGCATAGGCGCGGAACA‑TATCA‑CCTTCGCAAACCCTACCAATTGGGGGGAAACCgggg > 1:663062/1‑239 (MQ=255) gCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTT‑GGC‑GTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTG‑CCGCCCATAGCAGCCCT‑AAAGAAAAAATG‑CTGCCTTTATG‑CGTGTTTACGCCCGAAGGGGCGCGGAACA‑TATAC‑CCTTCGCAAGCCCAACCAATGTGGCGGAACCCGTggggac > 1:425561/1‑234 (MQ=255) gCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTT‑GGC‑GTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTG‑CCGCACATAGCAGCCCT‑AAAGAAAAAATG‑CTGCCTTTATG‑CGTGTTTACGCCCGCAGTGGCGCGGACCA‑TATCA‑CCTTCGCAAGCCGTACCAATTGGGGGGAATCCGGGGGGTa > 2:760836/1‑238 (MQ=255) gCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTT‑GGC‑GTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTG‑CCGCACATAGCAGCCCT‑AAAGAAAAAATG‑CTGCCTTTATG‑CGTGTTTACGCCCGCAGTGGCGCGGAAAA‑TATCA‑CCTTCGCAACCCATCCCAATTTGGCGTAATCCGTGGAGTa > 2:385248/1‑238 (MQ=255) gCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTT‑GGC‑GTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTG‑CCGCACATAGCAGCCCT‑AAAGAAAAAATG‑CAGCCTTTATG‑CGTGTTTACGCCCGCCGTGGCGCGGAACA‑TATCA‑CCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTa > 2:439761/1‑238 (MQ=255) gCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGGTGTT‑GGC‑GTTACCGGTTGGCTGAGTTGAAGCAAACGGCCACTTG‑CCGCACATAGCAGCCCT‑AAAGCAAAAATG‑CTGCCTGTTTG‑CGTGTTTACGCCCCACGTGCCCCGAAACA‑TACCA‑CCTTGCCAAGcca‑accaaaattggcgaaaaacaggggagac > 1:71211/1‑216 (MQ=255) ccGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTT‑GGC‑GTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTG‑CCGCACATAGCAGCCCT‑AAAGAAAAAATG‑CTGCCTTTATG‑CGTTGTTACGCCCGCAGTGGCCCGGAACA‑TATCA‑CCTTCGCAAGCCATACCCATTGGGCTGAATCCGTGGCGTAc > 2:732197/1‑238 (MQ=255) ccGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTT‑GGC‑GTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTG‑CCGCACATAGCAGCCCT‑AAAGAAAAAATG‑CTGCCTTTATG‑CGTGTTTACGCCCGCAGTGCCGCGGAACA‑TATCA‑CCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTAc > 2:661796/1‑238 (MQ=255) ttGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTT‑GGC‑GTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTC‑CCGCACATAGCAGCCCT‑AAAGAAAAAATG‑CTGCCTTTATG‑CGTGTTTCGGCCCGCCGTGGCCCGGCACA‑ATTAA‑CCTTCCCAACCCATACAAATTGGGCGAAACCCGTGGacaacccgtc > 1:169446/1‑227 (MQ=255) ttGTAAATTAGTGGTCCGCGTTTCGGGATGGGCCGGGCCCCGGCAGAACCTGGCCGCCGTAGAACAAACGGTTGTG‑GGC‑GTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTG‑CCGCACATAGCAGCCCT‑AAAGAAAAAATG‑CTGCCTTTATG‑CGTGTTTACGCCCGCAGTGGCGCGGAACA‑TATCA‑CCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCt < 2:477573/238‑1 (MQ=255) tgAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTT‑GGC‑GTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTG‑CCGCACATAGCAGCCCT‑AAAGAAAAAATG‑CTGCCTTTATG‑CGGGTTTACGCCCGCAGTGGCGCGGAACA‑TATCA‑CCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTggg > 2:228082/1‑237 (MQ=255) ggTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTT‑GGC‑GTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTG‑CCGCACATAGCAGCCCT‑AAAGAAAAAATG‑CTGCCTTTATG‑CGTGTTTACGCCCGCAGTGGCGCGGAACA‑TATCA‑CCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTcc > 2:692515/1‑238 (MQ=255) gtccgattttcactgtgtggcgcgCCGCGGCAAAAGTTTGCCCCCGTAAAAAAAACGGTTTGG‑GGG‑GTGTCCGGTTGGTTGTATTGAAGGAACCGGCCAATTC‑CCGACCATACCACCCCT‑AAAGAAAAAAGG‑CTGCCTTTATG‑CGTGTTTACGCCCGCAGTGGCGCGGAACA‑TATCC‑CCTCCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGc < 1:434700/216‑1 (MQ=255) aCGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTT‑GGC‑GTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTG‑CCGCACATAGCAGCCCT‑AAAGAAAAAATG‑CTGCCTTTATG‑CGTGTTTACGCCCGCAGTGGCGCGGAACA‑TATCA‑CCTTCGCAACCCATCCAAATTGGGCGGAATCCGTGGAGTACGGCtcccggagcacttgcagcat > 2:665021/1‑220 (MQ=255) aCGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTT‑GGC‑GTTACCAGTTGGTTGAGTTGAAGCAAACGGCCAATTG‑CCGCACATAGCAGCCCT‑AAAGAAAAAATG‑CTGCCTTTATG‑CGTGTTTACGCCCCCAGTGGCGCGGAACA‑TATCC‑CCTTATCAATCCAACCCAATTGGGGGAAATCCGGGGAGTACCGCTTCAGGGGCCCttcacccc > 1:331033/1‑232 (MQ=255) ggtcgagtggggTCAGGCCCGGGCAGAAACTTGCCGCCGTAGAACAACCGGTTGTT‑GGC‑GTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTG‑CCGCACAAAGCAGCCCT‑AAAGAAAAAAGG‑CTGCCTTTATG‑CGTGTTTACGCCCGCAGTGGCGCGGAACA‑TATCA‑CCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACa < 2:321176/228‑1 (MQ=255) gggccagcccccggaaaaattctGCCGCC‑TAAAACAAAAGGTGTTT‑GGCGGTTCCCGGTGGTGTGATGTGAACCAACGGGCAAATTC‑CCGCACAACCCACCCCA‑AAAAAAAAAATG‑CGCCTTTTTTG‑CGTGTTTCCGCCCGCAGTGGCGCGGAACA‑TACCC‑CCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCaaa < 1:572743/216‑1 (MQ=255) gTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTT‑GGC‑GTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTG‑CCGCACATAGCAGCCCT‑AAAGAAAAAATG‑CTGCCTTTATG‑CGTGTTTCCGCCCGCAGTGGCGCGGAACA‑TATCA‑CCTTCGCAAGCCCTACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGGGCCATTTCCCCCCTACAGGCACCAAAtca > 1:226881/1‑237 (MQ=255) cggggaaaaactttGCCCCCGAAAAAAAAACGGTTGTT‑GGG‑TTTACCGGTTGGTTGAGTTGAAGCAACCGGCCAATTG‑CCCCACAAAGCGGCCCT‑AAAAAAAAAATG‑CTGCCTTTATG‑CGTTTTTACGCCCGCAGTGGCGCGGAACA‑TATCC‑CCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGaa < 1:762749/226‑1 (MQ=255) cccggataaactttGCCGCCGGAGAACAAGCGGTTGTT‑GGC‑TTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTG‑CCGCACATAACAGCCCT‑AAAGAAAAAATG‑CTGCCTTTATG‑CGTGTTTACGCCCGCAGTGGCGCGGAACA‑TATCA‑CCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGaa < 2:816991/226‑1 (MQ=255) cGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTT‑GGC‑GTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTG‑CCGCACATAGCAGCCCT‑AAAGAAAAAATG‑CTGCCTTTATG‑CGTGTTTACGCCCGCAGTGGCGCGGAACA‑TATCA‑CCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCTGCACTCCAGGCACCAAATTCAATGAAACg > 2:62586/1‑239 (MQ=255) aaaCTTGCCGCCGTAGAACAAACGGTTGTT‑GGC‑GTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTG‑CCGCACATAGCAGCCCT‑AAAGAAAAAATG‑CTGCCTTTATG‑CGTGTTTACGCCCGCAGTGGCGCGGAACA‑TATCA‑CCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTa > 2:737567/1‑238 (MQ=255) accTTGCCGCAGTA‑AAAAAACGTTTTTTGGGC‑GTTACCGGTTGGTTGAGTGAAACCAAACGGCCAATTG‑CCGCACATAGCACCCCA‑AAAAAAAAAATG‑CTGCCTTTATG‑CGTGTTTACGCCCGGAGTGGCGCGGAACA‑TATCC‑CCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTagc < 1:225295/237‑1 (MQ=255) aCAAACGTTTGTT‑GGC‑TGTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTG‑CCGCACATAGCAGCCCT‑AAAGAAAAAATG‑CTGCCTTTAGG‑CGTGTTTACGCCCGCAGTGGCGCGGAACA‑TATCC‑CCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCa < 2:425561/239‑1 (MQ=255) aCGGTTGTT‑GGC‑GTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTG‑CCGCACATAGCAGCCCT‑AAAGAAAAAATG‑CTGCCTTTATG‑CGTGTTTACGCCCGCAGTGGCGCGGAACA‑TATCA‑CCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCCCTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAacg > 2:722945/1‑238 (MQ=255) ttgtt‑gGC‑GTTCCCGGTGGGTTGAGTTGAACCAAACGGCCAATTG‑CCGCACATAGC‑GCCCTAAAAGAAAAAATG‑CTGCCTTTATG‑CGTGTTTACGCCCGCGGTGGCGCGGAACA‑TATCC‑CCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCt < 2:455329/238‑1 (MQ=255) ttgggttttcacgggtttttggtttgaAACAAACGG‑CAATTGCCCGCAAATGGCAGCCCA‑AAAAAAAAAAGT‑CTCCTTTTATG‑CGTTTTTGCGCCGGCAGGGGCGCGGAACA‑TATCA‑CCTGCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCg < 1:387273/216‑1 (MQ=255) ttggttgATTTGAAGCAAACGGCCAATTG‑CCGCAAATGGCAGCCCT‑AAAGAAAAAATG‑CTGCCTTTATG‑CGTGTTTACGCCCGCAGTGGCGCGGAACA‑TATCA‑CCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTcc < 2:792312/238‑1 (MQ=255) tggttgAGTGAAAGCAAACGGCAAATTG‑CCGCACATGGCAGCCTT‑AAAGAAAAAATG‑CTGCCTTTAGG‑CGTGTTTCCGCCCGAAGTGGCGCGGAACA‑TATCA‑CCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAg < 2:308378/239‑1 (MQ=255) gggggtttgaAACAACCGCCCAATTG‑CCCCAAAAAGC‑GCCCT‑AAAAAAAAAACGCCCGCCTTTAGG‑CGTTTTTCCGCCGGGGGGGGCCCGGAACA‑TATCC‑CCTCCGAAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAgcg < 1:454308/233‑1 (MQ=255) aGCAAACGGCCAATTG‑CCGCACATAGCAGCCCT‑AAAGAAAAAATG‑CTGCCTTTATG‑CGTGTTTACGCCCGCAGTGGCGCGGAACA‑TATCA‑CCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCCCTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGGGGAAATCTTCCAGCCCCATATCttt > 2:223043/1‑239 (MQ=255) aCGGCCAATTG‑CCGCACATAGCAGCCCT‑AAAGAAAAAATG‑CTGCCTTTATG‑CGTGTTTACGCCCGCAGTGGCGCGGAACA‑TATCA‑CCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCCCCAGCGCCCCGCGGGGGGAAACTTCCCACGCCAAATCttttggc > 1:8336/1‑234 (MQ=255) gccaattccccacaaaggccgcCCA‑AAAAAAAAAAGG‑CTGCCTTTATG‑GGTGTTTACGCCCGGAGGGGCGGGGAACA‑TTCCC‑CCTTCCCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCAc < 1:737567/219‑1 (MQ=255) ccAATTG‑CCGCACATAGCAGCCCT‑AAAGAAAGAATG‑CTGCCTTTATG‑CGTGTTTACGCCCGCAGGGGCCCGGAACA‑TATCC‑CCTCCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCAc < 2:743199/238‑1 (MQ=255) g‑ccgccAATAGCAGCCCT‑AAAGAAAAAAGG‑CGTCCTTTATG‑CGGTTTTACGCCCGCAGTGGCGCGGAACA‑TTTCC‑CCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGtt < 2:832434/239‑1 (MQ=255) cacaTAGCAGCCCT‑AAAGAAAAAATG‑CTGCCTTTATG‑CGTGTTTACGCCCGCAGTGGCGCGGAACA‑TATCA‑CCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTTCGGCGGAAATCTTCCAGCGCCATATCTTGTTGCAGCCCGCAGTTAAt > 2:633753/1‑238 (MQ=255) ccacccccccT‑AAAAAAAAAATG‑CT‑TCTTTGTGACGTGTTCACGCCCGC‑GTGGGCCCGAACACTATCA‑CCTCGGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGa < 1:439761/232‑1 (MQ=255) agcagcCCT‑AAAGAAAAAATG‑CTGCCTTTATG‑CGTGTTTACGCCCGCAGTGGCGCGGAACA‑TATCA‑CCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCCCCAGAGCGCTGCGGTGGAAATCTTCAAGCGCCATATCTTTTTGCGCACCCCGGTTAAAGCGATc > 1:156945/1‑239 (MQ=255) cccT‑AAAGAAAAAATG‑CTGCCTTTATG‑CGTGTTTACGCCCGCAGTGGCGCGGAACA‑TATCA‑CCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTCCGGTGGAAATCTTCCAGCGCCCTATCTTTGTGCGCCCCGCAGTTAATGCGATCCACGa > 2:88450/1‑239 (MQ=255) cccT‑AAAGAAAAAATG‑CTGCCTTTATG‑CGTGTTTACGCCCGCAGTGGCGCGGAACA‑TATCA‑CCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCCGCGGTGGAAATCCTCCACCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGa > 2:824664/1‑239 (MQ=255) ccT‑AAAGAAAAAATG‑CTGCCTTTATG‑CGTGTTTACGCCCGCAGTGGCGCGGAACA‑TATCA‑CCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCCGTTAATGCGATCCACGAg > 2:860830/1‑239 (MQ=255) ccaaaaaaaaaaaGT‑CTGCCTTTATG‑CGTGTTTCCGCCGTGAGTGGCGCGGAACA‑T‑TCACCCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACg < 2:162612/234‑1 (MQ=255) t‑AAAGAAAAAATG‑CTGCCTTTATG‑CGTGTTTACGCCCGAAGGGGCGCGGAACA‑TATCC‑CCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGc < 2:340413/239‑1 (MQ=255) aaGAAAAAATG‑CTGCCTTTATG‑CGTGTTTACGCCCGCAGTGGCGCGGAACA‑TATCA‑CCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAgg > 2:482205/1‑236 (MQ=255) aaGAAAAAATG‑CTGCCTTTATG‑CGTGTTTACGCCCGCAGTGGCGCGGAACA‑TATCA‑CCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAgg > 2:860283/1‑236 (MQ=255) aaGAAAAAATG‑CTGCCTTTATG‑CGTGTTTACGCCCGCAGTGGCGCGGAACA‑TATCA‑CCTTCGCAAGCCATACAAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCTGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTTTGCGCCCCGCAATTAATGCGTTCCCCGCgg > 2:749476/1‑236 (MQ=255) aaGAAAAAATG‑CTGCCTTTATG‑CGTGTTTACGCCCGCAGTGGCGCGGAACA‑TAGCA‑CCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTTCGGTGGAAAACTTCCAGCGCCATATCTTTGTTAGCACCGCAGTTAAGGCGATcacctagg > 2:749464/1‑229 (MQ=255) aGAAAAAATG‑CGTCTTTTATG‑CGTGTGTCCGCCCGCAGTGGCGCGGACCA‑TATCC‑CCTGCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTg < 2:690689/239‑1 (MQ=255) aaaaaTGTCTGCTTTTTTG‑GGGTTTTCCGCCCGGGGGGGCGCGAAACA‑TTTCC‑CCTGCGAAAGCCATACCAATTGGGCGTAATCCGGGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGt < 1:66419/239‑1 (MQ=255) aaaaTG‑CTGCCTGTAAG‑CGTTTTTGCGCCCGCAGTGGCGAGGAACA‑TATCC‑CCTTCGAAAGCCATCCCAATTGGGCGTAATCCGGGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGttt < 2:408654/239‑1 (MQ=255) ctgcCTTTATG‑CGTGTTTACGCCCGCAGTGGCGCGGAACA‑TATCA‑CCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATCTCTTTTGGCCCACCGCAGTGAATGCAATCCACGAGGCCTGGTTTCGGGGa > 1:378994/1‑239 (MQ=255) ccTTTATG‑CGTGTTTACGCCCGCAGTGGCGCGGAACA‑TATCA‑CCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCCCGAGGCCTGGTTTCGGTGGCAg > 2:625842/1‑239 (MQ=255) tATG‑CGTTTTTACGCCCGCAGGGGCGCGGAACA‑TATCC‑CCTGCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTagc < 1:334546/134‑1 (MQ=255) ggttttttccgccgggtgtgggccgGAACT‑TTTCC‑CCTTCGCAATCCCTTCCAATTTGGGGTAATCCGTGGAGTACCGCTTCTGGGGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGTGACAGATTGACt < 1:228082/216‑1 (MQ=255) ggttgtTTACGCCGGCAGTGGCGCGGAACA‑TATCC‑CCATCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGTGACAGATTGACt < 2:497746/236‑1 (MQ=255) gtTTACGCCCGCAGTGGCGCGGAACA‑TATCA‑CCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGTGACAGATTGACTtca > 2:145306/1‑238 (MQ=255) tttACGCCCGCAGTGGCGCGGAACA‑TATCA‑CCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCAAGCGCCCACTCTTTGTGCGCCCCCCAGTTAATGCGACCACCGAGGCCTGGTTTCGGTGAAAGATTGGATtcaga > 1:74017/1‑238 (MQ=255) tttACGCCCGCAGTGGCGCGGAACA‑TATCA‑CCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCACCGCGCTGCGGTGGAAATCTTCCAGCGCCCTATCTTTTTGCGCACCGCAGTTAATGCGACCCCCGAGGCCTGGTTTCGTGGACAAATTGCCttacgc > 1:313344/1‑235 (MQ=255) tACGCCCGCAGTGGCGCGGAACA‑TATCA‑CCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGaa > 2:334546/1‑134 (MQ=255) tACGCCCGCAGTGGCGCGGAACA‑TATCA‑CCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGTGACAGATTGACTtccgtca > 2:323917/1‑239 (MQ=255) cGCAGTGGCGCGGAACA‑TATCA‑CCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGTGACAGATTGACTTCAGTCAGCATgg < 2:156945/239‑1 (MQ=255) cAGTGGCGCGGAACA‑TATCA‑CCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTgcg > 1:642938/1‑174 (MQ=255) cAGTGGCGCGGAACA‑TATCA‑CCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTgcg < 2:642938/174‑1 (MQ=255) tgagccgaaattatCA‑CCTTAGCAAGCCATACCAATTGGGCTTAAGCCGTGGAGTTCCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTTGTTTCGGTGACAGATTGACTTCAGTCAGCATGgcgcgc < 2:511776/227‑1 (MQ=255) cgcgGAACA‑TATCA‑CCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGTGACAGATTGACTTCAGTCAGCATGGCGCGccc > 2:238460/1‑237 (MQ=255) aCA‑TATCC‑CCTTCGAAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGGTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGTGACAGATTGACTTCAGTCAGCATGGCGCGccagcccag < 2:226881/238‑1 (MQ=255) cA‑TATCA‑CCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTACTGCGATCCACGAGGCCTGGTTTCGGTGACAGATTGACTTCAGTCAGCATGGCGCGCCAGCCcagca > 2:32247/1‑239 (MQ=255) cA‑TATCA‑CCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGTGACAGATTGACTtcagtcag < 2:719090/219‑1 (MQ=255) cA‑TATCA‑CCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGTGACAGATTGACTtcagtcag > 1:719090/1‑219 (MQ=255) atCT‑CCTTCGCACGCCCTTCCAATGGGGCGTAATCGGTGGAGGACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGTCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGTGACAGATTGACTTCAGTCAGCATGGCGCGCCAGCCCAGCAggg < 2:702327/239‑1 (MQ=255) | TGCGCCGGTAAGGCCAAGCTGTTGGTACAACCGTTGACCTGCCGTCAGTTGTGAATTATTGGTACGCAGTTCGCGATCGGTCAGGCCACGGCAGAAACTTGCCGCCGTAGAACAAACGGTTGTT‑GGC‑GTTACCGGTTGGTTGAGTTGAAGCAAACGGCCAATTG‑CCGCACATAGCAGCCCT‑AAAGAAAAAATG‑CTGCCTTTATG‑CGTGTTTACGCCCGCAGTGGCGCGGAACA‑TATCA‑CCTTCGCAAGCCATACCAATTGGGCGTAATCCGTGGAGTACCGCTTCTGGTGCCATTTCCGCACTACAGGCACCAAATTCAATGAAACGGGGTAGCCAGCCCTGAATCGCCAGCGCGCTGCGGTGGAAATCTTCCAGCGCCATATCTTTGTGCGCACCGCAGTTAATGCGATCCACGAGGCCTGGTTTCGGTGACAGATTGACTTCAGTCAGCATGGCGCGCCAGCCCAGCAGGG > NC_000913/646973‑647445 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |